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*  Epitope mapping
... is also crucial to developing vaccines against prevalent viral diseases such as Dengue virus. Epitope mapping ... "Epitope Mapping". www.covalx.com/epitope2. Retrieved 2017-02-23. Epitope mapping at the US National Library of Medicine Medical ... As a result, mAb epitopes on these types of targets are often conformational, making them difficult to map. Epitope mapping has ... discontinuous epitopes have been mapped on CD20. The epitope mapping resolution here depends on the number of overlapping ...
*  Charles DeLisi
The use of bioinformatics for identifying class I restricted T cell epitopes. Methods (Epitope Mapping Issue). Bill Kwok, ...
*  Epitope binning
... is referenced in the literature under different names such as epitope mapping and epitope characterization. ... Autoimmunity Epitope mapping Abdiche, Y. N.; D. S. Malashock; A. Pinkerton; J. Pons (March 2009). "Exploring blocking assays ... Regardless of the naming, epitope binning is prevalent in the pharmaceutical industry. Epitope Binning is used in the discovery ... Epitope binning is a competitive immunoassay used to characterize and then sort a library of monoclonal antibodies against a ...
*  Osnat Penn
The Pepitope Server is used to map epitopes using affinity-selected peptides. Her work with autism genetic sequencing which won ... epitope mapping from affinity-selected peptides". Bioinformatics. 23 (23): 3244-3246. doi:10.1093/bioinformatics/btm493. ISSN ... "Stepwise prediction of conformational discontinuous B-cell epitopes using the Mapitope algorithm". Proteins: Structure, ...
*  Bacterial display
Antibody epitope mapping is used to find the specificity of an antibody. The epitope (antibody binding site of antigens) is ... Rockberg J, Lofblom J, Hjelm B, Uhlen M & Stahl S (2008). "Epitope Mapping of Antibodies Using Bacterial Surface Display". ... These include affinity-based screening, antibody epitope mapping, the identification of peptide substrates, the identification ... Charbit A, Sobczak E, Michel ML, Molla A, Tiollais P, Hofnung M. Presentation of two epitopes of the preS2 region of hepatitis ...
*  BioPerl
Huang, J.; Gutteridge, A.; Honda, W.; Kanehisa, M. (2006). "MIMOX: A web tool for phage display based epitope mapping". BMC ... Khaja R, MacDonald J, Zhang J, Scherer S (2006). "Methods for identifying and mapping recent segmental and gene duplications in ...
*  TPBG
"Glycosylation and epitope mapping of the 5T4 glycoprotein oncofoetal antigen". The Biochemical Journal. 363 (Pt 1): 137-45. doi ...
*  Sjögren syndrome antigen B
Kohsaka H, Yamamoto K, Fujii H, Miura H, Miyasaka N, Nishioka K, Miyamoto T (May 1990). "Fine epitope mapping of the human SS-B ... Sturgess AD, Peterson MG, McNeilage LJ, Whittingham S, Coppel RL (May 1988). "Characteristics and epitope mapping of a cloned ... Rauh AJ, Hornig H, Lührmann R (December 1988). "At least three distinct B cell epitopes reside in the C-terminal half of La ...
*  Immunomics
demonstrated that epitope-mapping tools could accurately identify the epitopes responsible for 95% of the murine T-cell ... T-cell and B-cell epitope mapping algorithms can computationally predict epitopes based on the genomic sequence of pathogens, ... Epitope mapping identifies the sites of antibodies to which their target antigens bind. In the past, scientists would have to ... This microarray can map MHC-restricted T cell epitopes. The Lymphochip is a specialized human cDNA microarray enriched for ...
*  Fibroblast activation protein, alpha
... epitope mapping and induction by growth factors". Int. J. Cancer. 58 (3): 385-92. doi:10.1002/ijc.2910580314. PMID 7519584. ... maps to chromosome band 2q23". Genomics. 25 (1): 335-7. doi:10.1016/0888-7543(95)80157-H. PMID 7774951. Scanlan MJ, Raj BK, ...
*  CD99
Gil MC, Lee MH, Seo JI, Choi YL, Kim MK, Jung KC, Park SH, Kim TJ (2004). "Characterization and epitope mapping of two ... Banting GS, Pym B, Darling SM, Goodfellow PN (1989). "The MIC2 gene product: epitope mapping and structural prediction analysis ...
*  FLOT1
Characterization and epitope-mapping of a novel flotillin-1 monoclonal antibody probe". J. Biol. Chem. 274 (18): 12702-9. doi: ...
*  MYOM1
cDNA cloning, epitope mapping and immunoelectron microscopy of two titin-associated proteins". Journal of Cell Science. 106 (1 ... Obermann WM, van der Ven PF, Steiner F, Weber K, Fürst DO (Apr 1998). "Mapping of a myosin-binding domain and a regulatory ... Obermann WM, Gautel M, Weber K, Fürst DO (Jan 1997). "Molecular structure of the sarcomeric M band: mapping of titin and myosin ... Obermann WM, Gautel M, Weber K, Fürst DO (Jan 1997). "Molecular structure of the sarcomeric M band: mapping of titin and myosin ...
*  FLOT2
Characterization and epitope-mapping of a novel flotillin-1 monoclonal antibody probe". J. Biol. Chem. 274 (18): 12702-9. doi: ... 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173-8. doi:10.1038 ...
*  MYOM2
cDNA cloning, epitope mapping and immunoelectron microscopy of two titin-associated proteins". J. Cell Sci. 106 (1): 319-30. ... cDNA cloning, epitope mapping and immunoelectron microscopy of two titin-associated proteins". Journal of Cell Science. 106 (1 ... cDNA cloning, epitope mapping and immunoelectron microscopy of two titin-associated proteins". Journal of Cell Science. 106 (1 ... Obermann WM, van der Ven PF, Steiner F, Weber K, Fürst DO (Apr 1998). "Mapping of a myosin-binding domain and a regulatory ...
*  Peptide microarray
2009). "Development of a novel peptide microarray for large-scale epitope mapping of food allergens". Journal of Allergy and ... to map an antibody epitope or to find key residues for protein binding. Practical applications are seromarker discovery, ... "Identification and Mapping of Linear Antibody Epitopes in Human Serum Albumin Using High-Density Peptide Arrays". PLOS ONE. 8 ( ... Mapping of immunodominant regions in antigens or whole proteomes Seromarker discovery Monitoring of clinical trials Profiling ...
*  Rashna Bhandari
"Domain-level antibody epitope mapping through yeast surface display of epidermal growth factor receptor fragments". Journal of ...
*  SNRPB
Elkon KB, Hines JJ, Chu JL, Parnassa A (1990). "Epitope mapping of recombinant HeLa SmB and B' peptides obtained by the ... Autoantibodies from patients with systemic lupus erythematosus frequently recognize epitopes on the encoded protein. Two ... and SmN by binding an epitope restricted to B/B'". Clin. Exp. Immunol. 92 (2): 263-7. doi:10.1111/j.1365-2249.1993.tb03390.x. ...
*  Collagen, type VII, alpha 1
Tanaka T, Furukawa F, Imamura S (May 1994). "Epitope mapping for epidermolysis bullosa acquisita autoantibody by molecularly ... cDNA cloning and chromosomal mapping of the gene". Proceedings of the National Academy of Sciences of the United States of ...
*  Anne Searls De Groot
These were among the first motif-based and matrix-based, fully automated T cell epitope mapping tools. The team applied these ... De Groot worked with Gabriel Meister and Bill Jesdale to develop the EpiMer and EpiMatrix epitope mapping tools. ... Annie De Groot and Bill Martin (COO/CIO EpiVax) founded EpiVax in 1998 to use bioinformatics to design epitope-driven vaccines ... Leonard Moise discovered regulatory T cell epitopes, called "Tregitopes", that are shown to activate regulatory T cells and ...
*  Eva Engvall
Perlmann's further research included cytotoxicity of human lymphocytes and immunogen selection and epitope mapping for malaria ... immunogen selection and epitope mapping [Review]. Vaccine 1998;6:183-187 Voller A, Huldt G, Thors C, Engvall E. New serological ...
*  CYP2C18
"Targeted antipeptide antibodies to cytochrome P450 2C18 based on epitope mapping of an inhibitory monoclonal antibody to P450 ...
*  Conformational epitope
These are known as linear epitopes. Antigen Linear epitope Epitope mapping, finding (on an antigen protein) the epitope(s) for ... Such segments are called epitopes. Likewise, it is only paratope of the receptor that comes in contact with the epitope. ... A conformational epitope is a sequence of sub-units (usually amino acids) composing an antigen that come in direct contact with ... a new method to predict conformational epitopes using phage display peptide sequences. ...
*  Chromogranin A
"Vasostatin-1 antigenic epitope mapping for induction of cellular and humoral immune responses to chromogranin A autoantigen in ... A peptide fragment of ChgA located in the Vasostatin-1, namely ChgA29-42 has been identified as the antigenic epitope ... vasostatin-1-derived peptide ChgA29-42 is an antigenic epitope of diabetogenic BDC2.5 T cells in nonobese diabetic mice". ... molecule have a higher degree of amino acid homology and methods where the antibodies are directed against specific epitopes ...
*  Protein microarray
Antibody characterization is characterizing cross-reactivity, specificity and mapping epitopes. Treatment development involves ...
*  Phage display
Users can use three dimensional structure of a protein and the peptides selected from phage display experiment to map ... Negi SS, Braun W (2009). "Automated Detection of Conformational Epitopes Using Phage Display Peptide Sequences". Bioinform Biol ... Explanation of "Protein interaction mapping" from The Wellcome Trust Lunder M, Bratkovic T, Doljak B, Kreft S, Urleb U, ... characterize small molecules-protein interactions and map protein-protein interactions. ...