Molecular analysis of the DNA sequences of the internal transcribed spacer (IT) region of S. thailandica showed that the ... match between large subunit ribosomal DNA sequences of the two-a value typical of many species in the same genus of Boletaceae ...

"Phylogenetic classification of Antrodia and related genera based on ribosomal RNA internal transcribed spacer sequences". ... "Phylogenetic relationships in European Ceriporiopsis species inferred from nuclear and mitochondrial ribosomal DNA sequences". ...

... is transcribed from ribosomal DNA (rDNA) and then bound to ribosomal proteins to form small and large ribosome ... The first spacer corresponds to the one found in bacteria and archaea, and the other spacer is an insertion into what was the ... "ribosomal DNA" or rDNA (note that the term seems to imply that ribosomes contain DNA, which is not the case). In prokaryotes a ... rRNA can form tight and specific interactions with ribosomal proteins to form ribosomal subunits. These ribosomal proteins ...

... s (aka ERC) are pieces of extrachromosomal circular DNA (eccDNA) derived from ribosomal DNA (rDNA ... Looping out of organized ribosomal genes in intergenic nontranscribed spacers yielded either large or small repeat circles ... Extrachromosomal ribosomal DNA circle accumulation during the retrograde response may suppress mitochondrial cheats in yeast ... Circular extrachromosomal DNA are not only found in yeast but other eukaryotic organisms. A regulated formation of eccDNA in ...

... based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species ... based on nuclear ribosomal DNA ITS sequences". Aliso. 22: 372-395. doi:10.5642/aliso.20062201.31. Retrieved 13 October 2015. ... and about 780 species based on the nuclear ribosomal gene internal transcribed spacers. Some of the subgenera correspond to the ... İpek, Meryem; İpek, Ahmet; Simon, Philipp W. (2014). "Testing the utility of matK and ITS DNA regions for discrimination of ...

... based on nuclear ribosomal DNA ITS sequences". Aliso. 22: 372-395. doi:10.5642/aliso.20062201.31. Retrieved 13 October 2015. Li ... based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species ... ramosum as assessed by random amplified polymorphic DNA (RAPD). Retrieved 14 October 2015. in Zeder et al (2006, Chapter 10. pp ...

DNA, ribosomal spacer MeSH D13.444.308.425 - DNA, neoplasm MeSH D13.444.308.435 - DNA, plant MeSH D13.444.308.435.275 - DNA, ... DNA, recombinant MeSH D13.444.308.475 - DNA, ribosomal MeSH D13.444.308.475.230 - DNA, ribosomal spacer MeSH D13.444.308.480 - ... DNA adducts MeSH D13.444.308.142 - DNA, a-form MeSH D13.444.308.148 - DNA, algal MeSH D13.444.308.150 - DNA, antisense MeSH ... DNA, bacterial MeSH D13.444.308.227 - DNA, c-form MeSH D13.444.308.243 - DNA, catalytic MeSH D13.444.308.283 - DNA, circular ...

"Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker". PLOS ONE. 7 (8): ... Dinoflagellates appear to be capable of carrying out several DNA repair processes that can deal with different types of DNA ... Most eukaryotic algae contain on average about 0.54 pg DNA/cell, whereas estimates of dinoflagellate DNA content range from 3- ... Polyploidy or polyteny may account for this large cellular DNA content, but earlier studies of DNA reassociation kinetics and ...

Isolation of genomic DNA was performed by Ausubel et al. in 1996. Amplification of the 16S ribosomal RNA and subsequent ... This was determined by cell plate counting and ribosomal intergenic spacer analysis (RISA). Aerobic azoreductases make a ... The 16s ribosomal RNA gene of X. azovorans KF46FT has been amplified using the polymerase chain reaction (PCR) and has been ... Extrachromosomal DNA in the form of two large plasmids was detected by pulsed-field gel electrophoresis. Sequencing of the 16S ...

It is required for the maturation of the 25S and 5.8S ribosomal RNAs. It may serve as an essential factor in ribosome formation ... The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1". DNA Res ... that coordinates processing of the spacer regions in pre-rRNA. The Pes1-Bop1 complex has several components: BOP1, GRWD1, PES1 ... is an essential gene required for maturation of the 25S and 5.8S ribosomal RNAs". Nucleic Acids Res. 29 (17): 3621-30. doi: ...

The DNA found between each repeated gene in the gene cluster is non-conserved. Portions of the DNA sequence of a gene is found ... In the eukaryotic genome, tandemly arrayed genes make up ribosomal RNA. Tandemly repeated rRNAs are essential to maintain the ... separated only by a nontranscribed spacer region. While the genes contained in a gene cluster encode for similar proteins, ... Portions of the DNA sequence of each gene within a gene cluster are found to be identical; however, the resulting protein of ...

The repeats are separated by spacers of similar length. It has been demonstrated that these spacers can be derived from phage ... DNA and Cell Biology. 25 (3): 135-41. doi:10.1089/dna.2006.25.135. PMID 16569192. Mourtada-Maarabouni M, Pickard MR, Hedge VL, ... Ribosomal RNA was next to be discovered, followed by URNA in the early 1980s. Since then, the discovery of new non-coding RNAs ... The DNA sequence from which a functional non-coding RNA is transcribed is often called an RNA gene. Abundant and functionally ...

Henry et al., 2017 apply a Japanese PCR-based test of nuclear ribosomal intergenic spacer and elongation factor 1-α. They find ... Al Rwahnih et al., 2013 discovered Grapevine Red Blotch-associated Virus (GRBaV) here, a DNA virus of this crop. This is one of ... Mathey 2013 shows that Rpf1 is responsible for most resistance in the Watsonville and Oxnard environments and provides a DNA ... "DNA Screening Reveals Pink Bollworm Resistance to Bt Cotton Remains Rare After a Decade of Exposure". Journal of Economic ...

Hayes, William S.; Borodovsky, Mark (1998). "Deriving ribosomal binding site (RBS) statistical models from unannotated DNA ... The composition of nucleotides in the spacer region itself was also found to affect the rate of translation initiation in one ... The ribosomal protein S1 binds to adenine sequences upstream of the RBS. Increasing the concentration of adenine upstream of ... A ribosome binding site, or ribosomal binding site (RBS), is a sequence of nucleotides upstream of the start codon of an mRNA ...

Wei, X.-X.; Wang, X.-Q. (2004). "Recolonization and radiation in Larix (Pinaceae): evidence from nuclear ribosomal DNA ... cite journal}}: Cite journal requires ,journal= (help) Gernandt, D. S.; Liston, A. (1999). "Internal transcribed spacer region ...

... while base-pairing between DNA and incoming nucleotides provides the mechanism through which DNA polymerase replicates DNA and ... Cockburn AF, Newkirk MJ, Firtel RA (December 1976). "Organization of the ribosomal RNA genes of Dictyostelium discoideum: ... mapping of the nontranscribed spacer regions". Cell. 9 (4 Pt 1): 605-613. doi:10.1016/0092-8674(76)90043-X. PMID 1034500. S2CID ... DNA with high GC-content is more stable than DNA with low GC-content. Crucially, however, stacking interactions are primarily ...

... based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species ... based on nuclear ribosomal DNA ITS sequences". Aliso. 22: 372-395. doi:10.5642/aliso.20062201.31. Retrieved 13 October 2015. ... and about 780 species based on the nuclear ribosomal gene internal transcribed spacers. Some of the subgenera correspond to the ... This remarkable variation was noted in the discussion of the evolution of junk DNA and resulted in the Onion Test, a "reality ...

All the DNA, human and microbial, were analyzed with DNA sequencing machines. The microbial genome data were extracted by ... while fungi identification is based on Internal Transcribed Spacer (ITS). The technique is fast and not so expensive and ... identifying the bacterial specific ribosomal RNA, 16S rRNA. The researchers calculated that more than 10,000 microbial species ... it is optimal for samples that may be contaminated by host DNA. Primer affinity varies among all DNA sequences, which may ...

... using sequences of the nuclear ribosomal transcribed spacers, In: Willdenowia 36, 2006, pp. 647-656. Muratović, E., Bogunić, F ... However, extensive DNA-analyses have shown that this group is polyphyletic. Lilium bosniacum Beck ex Fritsch 1909 Section 3b ...

... are shown protruding from the linear DNA. The linear region of the HIV ribosomal frameshift signal contains a highly conserved ... There are typically three elements that comprise a −1 frameshift signal: a slippery sequence, a spacer region, and an RNA ... DnaX ribosomal frameshifting element Frameshift mutation HIV ribosomal frameshift signal Insertion sequence IS1222 ribosomal ... aligns a protein against a DNA sequence allowing frameshifts and introns FastY - compare a DNA sequence to a protein sequence ...

A −1 frameshift triggered by such a sequence is a Programmed −1 Ribosomal Frameshift. It is followed by a spacer region, and an ... aligns a protein against a DNA sequence allowing frameshifts and introns FastY - compare a DNA sequence to a protein sequence ... Lin Z, Gilbert RJ, Brierley I (September 2012). "Spacer-length dependence of programmed -1 or -2 ribosomal frameshifting on a ... that controls the rate and chance of ribosomal frameshifting. A slippery sequence causes a faster ribosomal transfer which in ...

... following comparative analyses of the 16S ribosomal RNA gene sequences and 16S-23S rDNA internal transcribed spacer sequences ... The mol% of guanine and cytosine in the DNA is 26.3% with 1,511 protein coding genes out of the 1,566 genes predicted. These ...

Somatic mutation Somatic mutations Somatostatin SOS box SOS repair SOS response Southern blot Southern blotting Spacer DNA ... Reverse genetics Reversion RF RFLP RFLP mapping Rho Ribonucleic acid Ribonucleotide Ribose Ribosomal protein Ribosomal RNA ... DMD DNA DNA bank DNA clone DNA cloning DNA fingerprint DNA glycosylase DNA gyrase DNA hybridization DNA ligase DNA marker DNA ... polymerase DNA probe DNA repair genes DNA replication DNA sequence DNA sequencing Docking protein Domain Dominance variance ...

... based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species ... based on nuclear ribosomal DNA ITS sequences". Aliso. 22: 372-395. doi:10.5642/aliso.20062201.31. Retrieved 8 January 2015. ...

In one application an artificial DNA catalyst was prepared by attaching a copper ion to it through a spacer. The copper - DNA ... autoexcision and autocyclization of the ribosomal RNA intervening sequence of Tetrahymena". Cell. 31 (1): 147-157. doi:10.1016/ ... Other uses of DNA in chemistry are in DNA-templated synthesis, Enantioselective catalysis, DNA nanowires and DNA computing. ... Deoxyribozymes, also called DNA enzymes, DNAzymes, or catalytic DNA, are DNA oligonucleotides that are capable of performing a ...

Achenbach-Richter, L; Woese CR (1988). "The ribosomal gene spacer region in archaebacteria". Syst. Appl. Microbiol. 10 (3): 211 ... "DNA-DNA hybridization determined in micro-wells using covalent attachment of DNA". Int. J. Syst. Evol. Microbiol. 50 (3): 1095- ... This DNA transfer process can be regarded as a primitive form of sexual interaction. Beginning in 1992, data were published ... DNA analysis from 2008 (and later, 2017) has shown that eukaryotes possible evolved from thermoproteota-like organisms. Other ...

Achenbach-Richter, L; Woese CR (1988). "The ribosomal gene spacer region in archaebacteria". Syst. Appl. Microbiol. 10 (3): 211 ... 2000). "DNA-DNA hybridization determined in micro-wells using covalent attachment of DNA". Int. J. Syst. Evol. Microbiol. 50 (3 ... 2010 Cells of N. equitans are spherical with a diameter of approximately 400 nm, and have a very short and compact DNA sequence ... Winker, S; Woese CR (1991). "A definition of the domains Archaea, Bacteria and Eucarya in terms of small subunit ribosomal RNA ...

ITS data suggests the genus is paraphyletic while chloroplast DNA and nuclear 5S spacer data support it as monophyletic. ... Phylogeny Of Carpinus And Subfamily Coryloideae (Betulaceae) Based On Chloroplast And Nuclear Ribosomal Sequence Data. Plant ... DNA sequences suggest that Carpinus might have differentiated from the extinct genus Palaeocarpinus. Carpinus is defined by ... The placement of Ostryopsis as sister to the Ostrya-Carpinus clade is supported by a phylogenetic tree based on chloroplast DNA ...

Sequences should be masked similarly to targeting plastomes and nuclear ribosomal DNA. Nuclear repeats in the genome are an ... The Internal transcribed spacers (ITS) are non-coding regions within the 18-5.8-28S rDNA in eukaryotes and are one feature of ... DNA Sequencing kit NEBNext Ultra II DNA NEBNext Multiplex Oligos Nextera XT DNA Library Preparation kit TruSeq Nano DNA LT ... The high-copy fraction of the genome consists of the ribosomal DNA, plastid genome (plastome), mitochondrial genome (mitogenome ...

Deep 16S ribosomal RNA (rRNA) amplicon sequencing of the bacteria found in the soils of tomato plots, treated with a Sargassum ... Many DNA sequencing and omics-based approaches, combined with greenhouse experiments, have been utilized to characterize ... With the use of 16S rRNA and fungal internal transcribed spacer (ITS) sequencing, Renaut et al. examined the effect of ...