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*  Ribosomal DNA
... (rDNA) is a DNA sequence that codes for ribosomal RNA. Ribosomes are assemblies of proteins and rRNA molecules ... Keil RL, Roeder GS (1984). "Cis-acting, recombination-stimulating activity in a fragment of the ribosomal DNA of S. cerevisiae ... Weisburg WG, Barns SM, Pelletier DA, Lane DJ (January 1991). "16S ribosomal DNA amplification for phylogenetic study". J. ... Hillis, D. M.; Dixon, M. T. (1991). "Ribosomal DNA: Molecular evolution and phylogenetic inference". The Quarterly Review of ...
*  Amplified Ribosomal DNA Restriction Analysis
Amplified rDNA (Ribosomal DNA) Restriction Analysis is the extension of the technique of RFLP (restriction fragment length ... Identification of Acinetobacter Genomic Species by Amplified Ribosomal DNA Restriction Analysis. J. Clin. Microbiol. 33:11-15. ... Overnight digestion (10-16 hours) of about 300-500 ng of amplicon DNA in a 20 μL system with 4-5 units of Restriction Enzyme ... of more than 4bp would be irrelevant with respect to a gene of approximately 1500bp such as that coding for the 16s ribosomal ...
*  Centropristis
2008). Identification of larval sea basses (Centropristis spp.) using ribosomal DNA-specific molecular assays. Fishery Bulletin ...
*  Borrelia lusitaniae
by 16S Ribosomal DNA Sequence Analysis". International Journal of Systematic Bacteriology. 47 (4): 921-925. doi:10.1099/ ...
*  16S ribosomal RNA
Weisburg WG, Barns SM, Pelletier DA, Lane DJ (January 1991). "16S ribosomal DNA amplification for phylogenetic study". Journal ... Kolbert CP, Persing DH (June 1999). "Ribosomal DNA sequencing as a tool for identification of bacterial pathogens". Current ... 16S ribosomal DNA - François Lutzoni's Lab Eden PA, Schmidt TM, Blakemore RP, Pace NR (April 1991). "Phylogenetic analysis of ... Bacterial Sequencing The Ribosomal Database Project Ribosomes and Ribosomal RNA: (rRNA) SILVA rRNA database Greengenes: 16S ...
*  RNA polymerase I
Ribosomal DNA transcription is confined to the nucleolus, where about 400 copies of the 42.9-kb rDNA gene are present, arranged ... Myc is known to bind to human ribosomal DNA in order to stimulate rRNA transcription by RNA polymerase I. Two specific ... "c-Myc binds to human ribosomal DNA and stimulates transcription of rRNA genes by RNA polymerase I". Nature Cell Biology. 7 (3 ... "Integrative genomic analysis of human ribosomal DNA". Nucleic Acids Research. 39 (12): 4949-4960. doi:10.1093/nar/gkq1326. ...
*  Gruiformes
Using 12S ribosomal DNA sequences, Houde et al. (1997) were the first to present molecular genetic evidence of gruiform ... This was confirmed by Sibley and Ahlquist (1990) based on DNA-DNA hybridization and subsequently by Paton et al. (2003), Paton ... from the Gruifomes based on large DNA-DNA hybridization distances to other supposed Gruiformes. However, it was not until the ... One locus, i.e., mitochondrial DNA, contradicts the strict monophyly of Coronaves (Morgan-Richards et al. 2008), but phylogeny ...
*  Azoarcus olearius
... by analyses of partial 16S ribosomal DNA sequences". Applied and Environmental Microbiology. 61 (6): 2257-61. PMC 167497 . PMID ...
*  Rosemary
... assessed by nuclear ribosomal DNA sequences (ITS)". Plant Systematics and Evolution. 262: 1. doi:10.1007/s00606-006-0454-5. " ...
*  Rosmarinus
... assessed by nuclear ribosomal DNA sequences (ITS)". Plant Systematics and Evolution. 262 (1-2): 1-12. doi:10.1007/s00606-006- ...
*  Campanulaceae
inferred from ITS sequences of nuclear ribosomal DNA". Annals of the Missouri Botanical Garden. 90 (4): 554-575. doi:10.2307/ ... Cosner, M. E.; Raubeson, L. A.; Jansen, R. K. (2007). "Chloroplast DNA rearrangements in Campanulaceae: phylogenetic utility of ...
*  Branching order of bacterial phyla (Woese, 1987)
The gene used was the 16S ribosomal DNA. The names have been changed to reflect more current nomenclature used by molecular ... 2000). "Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution". Cell. 102 (5): 615-23. doi: ... divided Eubacteria into 11 divisions based on 16S ribosomal RNA (SSU) sequences: Purple Bacteria and their relatives (later ...
*  Geotrichum candidum
Alper, I; Michel, F; Labrie, S (2011). "Ribosomal DNA Polymorphisms in the Yeast Geotrichum candidum". Fungal Biology. 115 (12 ... Species of Geotrichum can be differentiated by sequence analysis of the nuclear ribosomal large subunit (18S ribosomal RNA) or ... Sybren de Hoog, G; Smith, M. T (2004). "Ribosomal Phylogeny and Species Delimitation in Geotrichum and its Teleomorphs". ... the internal transcribed spacer region of the nuclear ribosomal RNA gene. G. candidum colonies are thin, spreading, soft, ...
*  Sudha Bhattacharya
Bhattacharya, S; Som, I; Bhattacharya, A. "The ribosomal DNA plasmids of entamoeba". Parasitol Today. 14: 181-5. doi:10.1016/ ... Bhattacharya's laboratory first detected Ribosomal RNA genes on Circular DNA, while studying the parasite, and also discovered ... February 2004 The Ribosomal DNA Plasmids of Entamoeba; Bhattacharya S, Som I, Bhattacharya A; Parasitology Today, May 1998 ... Replication initiates at multiple random sites in the ribosomal DNA plasmid of the protozoan parasite Entamoeba histolytica; ...
*  Metrosideros
... (Myrtaceae) inferred from nuclear ribosomal DNA" (PDF). PNAS. Retrieved 2007-06-13. ...
*  Tropaeolum incisum
Hershkovitz, M.A.; Hernandez-Pellicer, C.C.; Arroyo, M.T.K. (2006). "Ribosomal DNA evidence for the diversification of ...
*  Tick
... inferred from nuclear ribosomal DNA". International Journal for Parasitology. 26 (5): 511-517. doi:10.1016/0020-7519(96)89379-9 ...
*  I-CreI
... has evolved to cut a 22-nucleotide sequence of DNA that occurs in alleles of the 23S ribosomal RNA gene that lack the I- ... Rochaix, JD; Malnoe, P (1978). "Anatomy of the chloroplast ribosomal DNA of Chlamydomonas reinhardtii". Cell. 15: 661-670. doi: ... I-CreI is a form of selfish DNA. Because I-CreI has evolved to cut such a long sequence of DNA, unlike restriction ... In order to use I-CreI as a tool in this fashion, it is necessary to make it recognize and cleave sequences of DNA different ...
*  SIR proteins
Smith JS; Boeke JD (January 1997). "An unusual form of transcriptional silencing in yeast ribosomal DNA". Genes & Development. ... Yeast mating Saccharomyces cerevisiae Centromere Computational epigenetics DNA methylation Epigenomics Histone code Human ... in a process that is thought to depend on the physical occlusion of DNA by SIR proteins. Recently, it has been shown that ...
*  Bovidae
Gatesy, J.; Amato, G.; Vrba, E.; Schaller, G. (1997). "A cladistic analysis of mitochondrial ribosomal DNA from the Bovidae". ... based on mitochondrial ribosomal DNA sequences". Molecular Biology and Evolution. 9 (3): 433-446. PMID 1584013. Lundrigan, B. " ...
*  Calorie restriction
Smith, J. S.; Boeke, J. D. (1997-01-15). "An unusual form of transcriptional silencing in yeast ribosomal DNA". Genes & ... The levels of 8-OHdG in the DNA of these organs in 15 month old mice were reduced to an average of 81% of that in the DNA of ... in Sir2 mutants an abundance of extra-chromosomal ribosomal DNA circles (that typically limit lifespan) has been observed, and ... Sohal RS, Agarwal S, Candas M, Forster MJ, Lal H (1994). "Effect of age and caloric restriction on DNA oxidative damage in ...
*  Unequal crossing over
ISBN 0-8053-4553-1. Szostak, J. W.; Wu, R. (1980). "Unequal crossing over in the ribosomal DNA of Saccharomyces cerevisiae". ... When viewing the genome of a eukaryote, a striking observation is the large amount of tandem, repetitive DNA sequences that ... Drosophila virilis has three sequences that make up 40% of the genome, and 35% of the Absidia glauca is repetitive DNA ...
*  Blastocladiomycota
Molecular phylogeny of the Blastocladiomycota (Fungi) based on nuclear ribosomal DNA. Fungal Biology 115:381-392. Kendrick, ...
*  Tsukamurella tyrosinosolvens
"Tsukamurella tyrosinosolvens Intravascular Catheter Infection Identified Using 16S Ribosomal DNA Sequencing". Clinical ...
*  Sphaerobolus
"Evolution of gilled mushrooms and puffballs inferred from ribosomal DNA sequences". Proc. Natl. Acad. Sci. U.S.A. 94 (22): ...