CarbohydratesSequences and topology. 44: 39-47. doi:10.1016/j.sbi.2016.11.011. PMID 27940408. Crispin, Max; Stuart, David I ... Around 20% of the deposited carbohydrate structures are in unjustified energy minima. A number of carbohydrate validation web ... see for recommendations on carbohydrate model building and refinement and for reviews on general errors in carbohydrate ... Lütteke, Thomas; von der Lieth, Claus-W (2004). "pdb-care (PDB CArbohydrate REsidue check): a program to support annotation of ...
Kellermann J, Lottspeich F, Geiger R, Deutzmann R (1988). "Human urinary kallikrein--amino acid sequence and carbohydrate ... Complete amino acid sequence and sites of glycosylation". Int. J. Pept. Protein Res. 33 (4): 237-49. doi:10.1111/j.1399- ... 1996). "Evaluation of the extent of the binding site in human tissue kallikrein by synthetic substrates with sequences of human ... Lottspeich F, Geiger R, Henschen A, Kutzbach C (1980). "N-Terminal amino acid sequence of human urinary kallikrein homology ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... Henrissat B (December 1991). "A classification of glycosyl hydrolases based on amino acid sequence similarities". Biochem. J. ... Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities An aspartic acid has ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... Croux C, Garcia JL (1991). "Sequence of the lyc gene encoding the autolytic lysozyme of Clostridium acetobutylicum ATCC824: ... Henrissat B (December 1991). "A classification of glycosyl hydrolases based on amino acid sequence similarities". Biochem. J. ...
Lectins recognise and bind particular sugar sequences in carbohydrates; peanut agglutinin binds the carbohydrate sequence Gal-β ... Available Structures of peanut agglutinin Because peanut agglutinin specifically binds a particular carbohydrate sequence it ... GalNAc carbohydrate sequence. The protein is 273 amino acids in length with the first 23 residues acting and a signal peptide ... the binding specificity of peanut agglutinin is used to isolate glycosylated molecules which have the sugar sequence Gal-β(1-3 ...
Sequence data shows that initial viral variants in an immunologically naïve host have few glycosylation sites and shorter ... PNGSs allow for the binding of long-chain carbohydrates to the high variability regions of gp120, so the authors hypothesize ... 2008). "HIV Sequence Compendium", Los Alamos National Laboratory. Hallenberger S, Bosch V, Angliker H, Shaw E, Klenk HD, Garten ... The presence of large carbohydrate chains extending from gp120 might obscure possible antibody binding sites. The boundaries of ...
Though carbohydrate consumption is beneficial in mating, it does not play an active role in male-to-male competition. ... Genome Sequence of Blattabacterium sp. Strain BGIGA, Endosymbiont of the Blaberus giganteus Cockroach. Journal of Bacteriology ... Carbohydrate intake has been found to be related to male sex pheromone expression, dominance status, and attractiveness more so ... Males have been shown to have a preference for a high-carbohydrate diet versus one focused on protein. This would suggest they ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... CAZypedia, an online encyclopedia of carbohydrate-active enzymes. Igarashi T, Yamamoto A, Goto N (1995). "Sequence analysis of ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. ... are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, ...
Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence ... This classification is available on the CAZy (Carbohydrate-Active EnZymes) web site. The same three-dimensional fold is ... Henrissat B, Coutinho PM (1999). "Carbohydrate-Active Enzymes server": -. Kolbinger F, Streiff MB, Katopodis AG (1998). " ... "A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities". Biochem. J. 326 ...
Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence ... This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is ... Sialyltransferase may be responsible for the synthesis of the sequence NEUAC-Alpha-2,3-GAL-Beta-1,3-GALNAC-, found on sugar ... Henrissat B, Coutinho PM (1999). "Carbohydrate-Active Enzymes server": -. Dall'Olio and Chiricolo, Glycoconjugate J. 18 841-850 ...
Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence ... This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site . The same three-dimensional fold is ... "A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities". Biochem. J. 326 ... and related proteins into distinct sequence-based families has been described. ...
Carbohydrates: A feast of structural glycobiology • Sequences and topology: Computational studies of protein-protein ... Agirre, Jon; Davies, Gideon J; Wilson, Keith S; Cowtan, Kevin D (June 2017). "Carbohydrate structure: the rocky road to ... Davies research investigates the biological chemistry of carbohydrates, from their structure to their roles in enzymology, ... Agirre, Jon; Davies, Gideon; Wilson, Keith; Cowtan, Kevin (2015). "Carbohydrate anomalies in the PDB". Nature Chemical Biology ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... Gilkes NR, Kilburn DG, Henrissat B, Miller Jr RC, Warren RA (1991). "Domains in microbial beta-1, 4-glycanases: sequence ... an online encyclopedia of carbohydrate active enzymes. Glycoside hydrolase family 7 CAZY GH_7 comprises enzymes with several ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... Fisher KJ, Aronson NN (December 1989). "Isolation and sequence analysis of a cDNA encoding rat liver alpha-L-fucosidase". ... 6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L- ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases. Henrissat B, ... Ruttkowski E, Labitzke R, Khanh NQ, Gottschalk M, Jany KD, Loffler F (1990). "Cloning and DNA sequence analysis of a ...
The bacteria contain an adhesion protein for the carbohydrate sequence Gal-1,4Gal. After incubation with various amounts of the ... The genome of S. suis isolates from the outbreak were examined to see whether its DNA sequence could explain why these ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... Henrissat B, Bairoch A (1993). "New families in the classification of glycosyl hydrolases based on amino acid sequence ... an online encyclopedia of carbohydrate active enzymes. Glycoside hydrolase family 45 CAZY GH_45 comprises enzymes with only one ...
Carbohydrate polymerases mediate the assembly of polysaccharides composed of different sequences and structures. Are the ... "Carbohydrate Research Award for Creativity in Carbohydrate Chemistry , International Carbohydrate Organization". ... "Fluorosugar Chain Termination Agents as Probes of the Sequence Specificity of a Carbohydrate Polymerase". J. Am. Chem. Soc. 134 ... Polymers that co-cluster a receptor on B cells (the B cell receptor) with a carbohydrate-binding protein (CD22) dampen immune ...
Owing to the lack of a genetic blue print, carbohydrates do not have a "fixed" sequence. Instead, the sequence is largely ... The sequence of branching information in a carbohydrate molecule is represented in the figure. Flitsch SL and Ulijn RV (2003). ... as well as carbohydrate interactions. Conventional usage of the term does not currently include the treatment of carbohydrates ... Carbohydrates or "sugars" (this term should not be confused with simple sugars - monosaccharides and disaccharides) as they are ...
"Km+, a mannose-binding lectin from Artocarpus inegrifolia: amino acid sequence predicted tertiary structure, carbohydrate ...
Sulfation of tyrosines and carbohydrates occurs within the TGN. Other general post-translational modifications of proteins ... depending upon the signal sequence they carry. In this model, the Golgi is viewed as a set of stable compartments that work ... Protein modifications may form a signal sequence that determines the final destination of the protein. For example, the Golgi ... include the addition of carbohydrates (glycosylation) and phosphates (phosphorylation). ...
The major carbohydrate sequence linked to glycodelin-A also profusely coats the surface of schistosomes. The profile of the ... For example, human gametes are coated with carbohydrate sequences that have been implicated in the suppression of NK cell ... There are some notable examples of this mimicry or acquisition of the same carbohydrate sequences implicated in this protective ... The eu-FEDS model further suggests that specific carbohydrate sequences (oligosaccharides) are covalently linked to these ...
The sequence is divided up into codons, each of which is a particular sequence of three nucleotides and corresponds to a ... Carbohydrates are more easily broken down than lipids and yield more energy to compare to lipids and proteins. In fact, ... sequence. Sequence comparisons suggest recent horizontal transfer of many genes among diverse species including across the ... Thus a sequence of DNA codes for a particular protein that, due to the chemical properties of the amino acids it is made from, ...
The protein is composed of alpha helices and beta sheets that form two domains.[8] The N- and C- terminal sequences are ... Carbohydrate deficient transferrin increases in the blood with heavy ethanol consumption and can be monitored through ... In humans, transferrin consists of a polypeptide chain containing 679 amino acids and two carbohydrate chains. ...
... or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycoside hydrolases, based on sequence ... Henrissat, B. and Coutinho P.M. "Carbohydrate-Active Enzymes server". 1999. CAZypedia, an online encyclopedia of carbohydrate- ... isolation and amino acid sequence of a peptide containing the catalytic site". Proc. Natl. Acad. Sci. U.S.A. 83 (6): 1660-1664 ... are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, ...
Acetoacetate is an intermediate in the Krebs cycle which releases energy from sugars and carbohydrates.[22] ... Ozonolysis, and related dihydroxylation/oxidative sequences, cleave alkenes to give aldehydes or ketones, depending on alkene ... generated from carbohydrates, fatty acids, and amino acids in most vertebrates, including humans. Ketone bodies are elevated in ...