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*  Ancestral reconstruction
These states include the genetic sequence (ancestral sequence reconstruction), the amino acid sequence of a protein, the ... amino acid) sequence of proteins by Frederick Sanger in 1955, Zuckerkandl and Pauling postulated that such sequences could be ... Pupko, T.; Pe, I.; Shamir, R.; Graur, D. (2000). "A Fast Algorithm for Joint Reconstruction of Ancestral Amino Acid Sequences ... Yang, Ziheng; Kumar, Sudhir; Nei, Masatoshi (1995). "A new method of inference of ancestral nucleotide and amino acid sequences ...
*  Molecular phylogenetics
... including DNA/Amino Acid contiguous sequence assembly, multiple sequence alignment, model-test (testing best-fitting ... Modern sequence comparison techniques overcome this objection by the use of multiple sequences. Once the divergences between ... At any location within such a sequence, the bases found in a given position may vary between organisms. The particular sequence ... These have been replaced in recent times largely by DNA sequencing, which produces the exact sequences of nucleotides or bases ...
*  Protein primary structure
Protein sequencing Nucleic acid primary structure Translation Pseudo amino acid composition SANGER F (1952). "The arrangement ... Amino acids are polymerised via peptide bonds to form a long backbone, with the different amino acid side chains protruding ... Protein sequence is typically notated as a string of letters, listing the amino acids starting at the amino-terminal end ... as well as mixtures or ambiguous amino acids (similar to nucleic acid notation). Peptides can be directly sequenced, or ...
*  KDEL (amino acid sequence)
KDEL is a target peptide sequence in the amino acid structure of a protein which prevents the protein from being secreted from ... ER retention KKXX (amino acid sequence) Endoplasmic reticulum protein retention receptors KDELR1 KDELR2 KDELR3 Mariano ... K-Lysine D-Aspartic acid E-Glutamic acid L-Leucine Therefore, the sequence in three letter code is: Lys-Asp-Glu-Leu. The ... The abbreviation KDEL is formed by the corresponding letters to each amino acid. This letter system was defined by the IUPAC ...
*  KKXX (amino acid sequence)
... any amino acid X- any amino acid ER retention KDEL (amino acid sequence) Martin J. Vincent; Annelet S. Martin; Richard W. ... KKXX and for some proteins XKXX is a target peptide motif located in the C terminus in the amino acid structure of a protein ... The abbreviation KKXX is formed by the corresponding standard abbreviations for lysine (K) and any amino acid (X). This letter ...
*  N-acyl phosphatidylethanolamine-specific phospholipase D
The NAPEPLD cDNA sequence predicts 396 amino acid sequences in both mice and rats, which are 89% and 90% identical to that of ... "Amino Acid Sequencing". W.M. Keck Facility at Yale. 2006-10-23. Retrieved 2009-01-12. The Procise 494 cLC is described from the ... Regulation of Fatty Acid Ethanolamide Biosynthesis by Bile Acids". Structure. 23 (3): 598-604. doi:10.1016/j.str.2014.12.018. ... Bile acids bind with high affinity to selective pockets in this cavity, enhancing dimer assembly and enabling catalysis. NAPE- ...
*  Complement component 1s
The complete amino acid sequence". European Journal of Biochemistry. 169 (3): 547-53. doi:10.1111/j.1432-1033.1987.tb13644.x. ... The complete amino acid sequence". European Journal of Biochemistry. 169 (3): 547-53. doi:10.1111/j.1432-1033.1987.tb13644.x. ... Partial sequence determination of the heavy chain and identification of the peptide bond cleaved during activation". European ... Tosi M, Duponchel C, Meo T, Julier C (December 1987). "Complete cDNA sequence of human complement Cls and close physical ...
*  Endothiapepsin
Barkholt, V. (1987). "Amino acid sequence of endothiapepsin. Complete primary structure of the aspartic protease from Endothia ... Endothiapepsin (EC 3.4.23.22, Endothia aspartic proteinase, Endothia acid proteinase, Endothia parasitica acid proteinase, ...
*  SPINK1
Amino acid sequence of the reduced S-aminoethylated protein". Archives of Biochemistry and Biophysics. 179 (1): 189-99. doi: ... Purification and amino acid sequence". European Journal of Biochemistry / FEBS. 188 (3): 501-6. doi:10.1111/j.1432-1033.1990. ... Yamamoto T, Nakamura Y, Nishide J, Emi M, Ogawa M, Mori T, Matsubara K (Oct 1985). "Molecular cloning and nucleotide sequence ...
*  Glutamate-cysteine ligase
The complete amino acid sequence". European Journal of Biochemistry. 169 (3): 547-553. doi:10.1111/j.1432-1033.1987.tb13644.x. ... This peptide coupling is unique in that it occurs between the amino moiety of the cysteine and the terminal carboxylic acid of ... to metabolize γ-GC and GSH into its constituent amino acids. GCL enzymatic activity generally dictates cellular GSH levels and ...
*  HIST1H3B
Isolation and amino acid sequence". J. Biochem. 90 (4): 1205-11. PMID 7309716. Kardalinou E, Eick S, Albig W, Doenecke D (1993 ... 2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805-11. doi:10.1038/nature02055. PMID ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 1986). "Enhancer-facilitated expression of prokaryotic and eukaryotic genes using human histone gene 5' regulatory sequences". ...
*  H3F3A
Isolation and amino acid sequence". J. Biochem. 90 (4): 1205-11. PMID 7309716. Kato S, Sekine S, Oh SW, et al. (1995). " ... Nucleic Acids Res. 15 (7): 2871-89. doi:10.1093/nar/15.7.2871. PMC 340704 . PMID 3031613. "Entrez Gene: H3F3A H3 histone, ... evidence that basally expressed histone genes have intervening sequences and encode polyadenylylated mRNAs". Proc. Natl. Acad. ... "The Groucho/transducin-like enhancer of split transcriptional repressors interact with the genetically defined amino-terminal ...
*  HIST1H2BE
Isolation and amino acid sequence". J. Biochem. 85 (2): 615-24. PMID 422550. Dobner T, Wolf I, Mai B, Lipp M (1992). "A novel ... 2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805-11. doi:10.1038/nature02055. PMID ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  HIST1H2BG
Isolation and amino acid sequence". J. Biochem. 85 (2): 615-24. PMID 422550. Frohm M, Gunne H, Bergman AC, et al. (1996). " ... 2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805-11. doi:10.1038/nature02055. PMID ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  Histone H2B type 1-C
Isolation and amino acid sequence". J. Biochem. 85 (2): 615-24. PMID 422550. Albig W, Doenecke D (1998). "The human histone ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  HIST1H2BF
Isolation and amino acid sequence". J. Biochem. 85 (2): 615-24. PMID 422550. Albig W, Doenecke D (1998). "The human histone ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  Myelin basic protein
The complete amino acid sequence". J. Biol. Chem. 246 (18): 5770-84. PMID 5096093. Saxe DF, Takahashi N, Hood L, Simon MI (1985 ... Carnegie PR (1972). "Amino acid sequence of the encephalitogenic basic protein from human myelin". Biochem. J. 123 (1): 57-67. ... Gibson BW, Gilliom RD, Whitaker JN, Biemann K (1984). "Amino acid sequence of human myelin basic protein peptide 45-89 as ... "Complete amino acid sequence of PO protein in bovine peripheral nerve myelin". J. Biol. Chem. 262 (9): 4208-14. PMID 2435734. ...
*  HIST2H3PS2
Isolation and amino acid sequence". J. Biochem. 90 (4): 1205-11. PMID 7309716. Goto H, Tomono Y, Ajiro K, et al. (1999). " ... 2006). "The DNA sequence and biological annotation of human chromosome 1". Nature. 441 (7091): 315-21. doi:10.1038/nature04727 ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... Nucleic Acids Res. 31 (3): 878-85. doi:10.1093/nar/gkg176. PMC 149197 . PMID 12560483. Wang Y, Wysocka J, Sayegh J, et al. ( ...
*  HIST2H3C
Isolation and amino acid sequence". J. Biochem. 90 (4): 1205-11. PMID 7309716. Díaz-Jullien C, Pérez-Estévez A, Covelo G, ... Nucleic Acids Res. 31 (3): 878-885. doi:10.1093/nar/gkg176. PMC 149197 . PMID 12560483. Yoon HG, Chan DW, Huang ZQ, Li J, ... regulatory sequences". Biochem Cell Biol. 64 (4): 277-289. doi:10.1139/o86-039. PMID 3013246. "Entrez Gene: HIST2H3C histone ...
*  Glycyl endopeptidase
Ritonja, A.; Buttle, D.J.; Rawlings, N.D.; Turk, V.; Barrett, A.J. (1989). "Papaya proteinase IV amino acid sequence". FEBS ...
*  ITIH3
cDNA and deduced amino-acid sequence". Eur. J. Biochem. 212 (3): 771-6. doi:10.1111/j.1432-1033.1993.tb17717.x. PMID 7681778. ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  Richard Perham
Perham, Richard N; Baumeister, Wolfgang; Johnson, Louise; Steven, Alasdair (1975). Instrumentation in amino acid sequence ... Instrumentation in amino acid sequence analysis. London New York: Academic Press. ISBN 9780125512503. Perham, Richard N; ...
*  Dihydrofolate reductase
Purification, properties, and amino acid sequence". The Journal of Biological Chemistry. 254 (22): 11475-84. PMID 500653. ... thymidylic acid, and certain amino acids. While the functional dihydrofolate reductase gene has been mapped to chromosome 5, ... Folic acid is necessary for growth, and the pathway of the metabolism of folic acid is a target in developing treatments for ... Masters JN, Attardi G (1983). "The nucleotide sequence of the cDNA coding for the human dihydrofolic acid reductase". Gene. 21 ...
*  ITIH1
cDNA and deduced amino-acid sequence". Eur. J. Biochem. 212 (3): 771-6. doi:10.1111/j.1432-1033.1993.tb17717.x. PMID 7681778. ... 1992). "Human inter-alpha-trypsin inhibitor: full-length cDNA sequence of the heavy chain H1". Biochim. Biophys. Acta. 1132 (1 ... their identification by electrophoresis and partial sequencing. Differential reactivity with concanavalin A". Biol. Chem. Hoppe ...
*  STIM2
... of amino acid sequence conserved) and STIM2 (31% identical; 46% of amino acid sequence conserved). Unicellular eukaryotes such ... of the amino acid sequence of STIM1). Only the extreme of the C-terminal region shows a significant sequence divergence. The ... Human STIM2 consists of 833 amino acid residues (aas) (105-115 kDa) (Fig. 1), 148 additional aas compared to human STIM1. Their ... 1). Mouse STIM2 shares a 92% identity with human STIM2 in the aminoacid sequence according to the pairwise alignment generated ...
*  Phage display
... were expressed both with and without the signal sequence. PelB (an amino acid signal sequence that targets the protein to the ... Moreover, pIII allows for the insertion of larger protein sequences (>100 amino acids) and is more tolerant to it than pVIII. ... Usually peptides that can be fused to pVIII are 6-8 amino acids long. The size restriction seems to have less to do with ... Direct Interaction Rescue or by adding an 8-10 amino acid linker between the cDNA and pIII at the C-terminus. pVIII is the main ...
*  Aspergillopepsin I
Amino acid sequence of the enzyme". Bioorg. Khim. 12: 1030-1047. Yagi, F.; Fan, J.; Tadera, K.; Kobayashi, A. (1986). " ... Effects of acid protease-specific inhibitors on the acid proteases from Aspergillus niger var. macrosporus". J. Biochem. 80: ... Aspergillopepsin I (EC 3.4.23.18, Aspergillus acid protease, Aspergillus acid proteinase, Aspergillus aspartic proteinase, ... Aspergillus saitoi acid proteinase, pepsin-type aspartic proteinase, Aspergillus niger acid proteinase, sumizyme AP, proctase P ...