Transcription factor II E - Wikipedia
Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. Transcription factor II E is encoded by the GTF2E1 ... Transcription factor II E (TFIIE) is one of several general transcription factors that make up the RNA polymerase II ... Transcription+Factor+TFIIE at the U.S. National Library of Medicine Medical Subject Headings (MeSH) v t e (Articles with short ... "Genes encoding general initiation factors for RNA polymerase II transcription are dispersed in the human genome". Hum. Mol. ...
ERCC3 gene: MedlinePlus Genetics
... of a group of proteins known as the general transcription factor 2 H (TFIIH) complex. The TFIIH complex has two major functions ... Gene transcription is the first step in protein production. By controlling gene transcription, the TFIIH complex helps regulate ... The TFIIH complex also plays an important role in repairing damaged DNA. DNA can be damaged by ultraviolet (UV) rays from ... Studies suggest that the XPB protein works together with XPD, another protein in the TFIIH complex that is produced from the ...
REGULATOR: a database of metazoan transcription factors and maternal factors for developmental studies
Transcription factor TFIIH subunit p52/Tfb2. ENSXETP00000015781. Pfam. PF03849. IPR004598. 3. 313. 1.30e-98. Transcription ... factor TFIIH subunit p52/Tfb2. ENSXETP00000015781. TIGRFAM. TIGR00625. IPR004598. 3. 399. 5.70e-165. Transcription factor TFIIH ... Copyright © 2017 REGULATOR: a database of metazoan transcription factors and maternal factors for developmental studies ...
7nvx.1 | SWISS-MODEL Template Library
TFIIH in a post-translocated state (with ADP-BeF3) ... TFIIH basal transcription factor complex helicase XPD subunit: ... General transcription factor IIH subunit 3: E. General transcription factor IIH subunit 5: F. General transcription factor IIH ... General transcription and DNA repair factor IIH helicase subunit XPB: H. General transcription factor IIE subunit 1: K. ... General transcription factor IIH subunit 1: B. General transcription factor IIH subunit 4: C. CDK-activating kinase assembly ...
Xeroderma Pigmentosum: Background, Pathophysiology, Epidemiology
XPG has been shown to form a stable complex with the transcription factor TFIIH, as mentioned above. Some manifestations of XPG ... Two types of NER exist: global genome (GG-NER) and transcription coupled (TC-NER). [5] The last decade has seen the cloning of ... The XPB and XPD gene products are part of a 9-subunit protein complex (TFIIH) that is also needed for the open complex ... XPG stabilizes TFIIH, allowing transactivation of nuclear receptors: implications for Cockayne syndrome in XP-G/CS patients. ...
ncRNA | Free Full-Text | Non-Coding RNAs in Retinoic Acid as Differentiation and Disease Drivers
Stimulation of RARα Activation Function AF-1 through Binding to the General Transcription Factor TFIIH and Phosphorylation by ... Similarly, the transcription factors that mediate the expression of these microRNAs/lncRNAs have not been studied or analysed ... Repression of Id2 by both microRNAs leads to cell proliferation blockage and to Vfg upregulation, a transcription factor that ... 2017) showed that RA-mediated upregulation of miR-219 is essential for the repression of two transcription factors, Foxj3 and ...
SMART: DEXDc domain annotation
Eukaryotic TFIIH basal transcription factor complex helicase XPB subunit. An ATP-dependent 3-5 DNA helicase which is a ... Crystal structure of Escherichia coli transcription-repair coupling factor. 2f55. Two hepatitis c virus ns3 helicase domains ... component of the core-TFIIH basal transcription factor, involved in nucleotide excision repair (NER) of DNA and, when complexed ... The prototype of DEAD-box proteins is the translation initiation factor eIF4A. The eIF4A protein is an RNA-dependent ATPase ...
SMART: BSD domain annotation
Mammalian TFIIH basal transcription factor complex p62 subunit (GTF2H1).. * Yeast RNA polymerase II transcription factor B ... Solution structure of the BSD domain of human TFIIH basal transcription factor complex p62 subunit. ... Basal transcription factors. This information is based on mapping of SMART genomic protein database to KEGG orthologous groups ... The BSD domain is an about 60-residue long domain named after the BTF2-like transcription factors, Synapse-associated proteins ...
WikiGenes - Fluorescent Antibody Technique
SCOPe 2.07: Structural Classification of Proteins - extended
Class: transcription. Keywords: Transcription Factor TFIIH, Erythroid Kruppel-Like Factor EKLF, Activator, Protein Structure, ... Compound: RNA polymerase II transcription factor B subunit 1. Species: Saccharomyces cerevisiae S288c [TaxId:559292]. Gene: ... R-factor: N/A. AEROSPACI score: 0.02 (click here for full SPACI score report) Chains and heterogens:. *Chain A:. ... Compound: Krueppel-like factor 1. Species: Homo sapiens [TaxId:9606]. Gene: EKLF, KLF1. Database cross-references and ...
AG Kisker - Rudolf-Virchow-Zentrum - Center for Integrative and Translational Bioimaging
The intricate network between the p34 and p44 subunits is central to the activity of the transcription/DNA repair factor TFIIH ... In TFIIH the Arch domain of XPD is mechanistically essential for transcription and DNA repair. Nat Commun. 2020 Apr 3;11(1): ... Barnett J.T., Kuper J., Koelmel W., Kisker C., Kad N.M. The TFIIH subunits p44/p62 act as a damage sensor during nucleotide ... Houten, B.V., Kuper, J., Kisker, C. (2016). Role of XPD in cellular functions: To TFIIH and beyond. DNA Repair (Amst). May 16. ...
Podcast: Mapping DNA at Near-Atomic Resolution with Cryo-EM - High-Performance Computing News Analysis | insideHPC
In this video, Berkeley Lab scientists simulate the cryo-EM structure of Transcription Factor II Human (TFIIH). The atomic ... the scientists usedcryo-EM to resolve the 3-D structure of a protein complex called transcription factor IIH (TFIIH) at 4.4 ... Nogales and her colleagues have resolved the structure at near-atomic resolutions of a human transcription factor used in gene ... The challenge with TFIIH is that it is hard to produce and purify in large quantities, and once obtained, it may not form ...
Genes search | AnalogYeast
TFIIH basal transcription factor complex 89 kDa subunit) (TFIIH 89 kDa subunit) (TFIIH p89) (Xeroderma pigmentosum group B- ... General transcription and DNA repair factor IIH helicase subunit XPB (TFIIH subunit XPB) (EC 3.6.4.12) (Basic transcription ... General transcription and DNA repair factor IIH helicase subunit XPB (TFIIH subunit XPB) (EC 3.6.4.12) (DNA repair helicase ... ATP-dependent RNA helicase eIF4A (EC 3.6.4.13) (Eukaryotic initiation factor 4A) (eIF-4A) (Stimulator factor I 37 kDa component ...
Modifications de la chromatine et régulation de la transcription des gènes lors de la différentiation cellulaire | IGBMC
Functions and dysfunctions of the transcription/repair factor TFIIH (acronym TFIIH) Coordinator: F. Coin (IGBMC), collaboration ... Visualization of Endogenous Transcription Factors in Single Cells Using an Antibody Electroporation-Based Imaging Approach. * ... Nacho Molina, IGBMC, Illkirch, France, Quantification and analysis of nuclear transcription factor behavior and recruitment ... Chaperonin CCT checkpoint function in basal transcription factor TFIID assembly. * Simona Antonova ...
2005 - Clinic for Special Children
... which is caused by mutations in transcription factor II H (TFIIH) subunit genes. Comparative immunofluorescence analysis, ... Intact slow TnT mRNA was readily detected in patient muscle, indicating unaffected transcription and RNA splicing. Sequence of ... however, suggests that C7orf11 does not influence TFIIH directly. Given the absence of cutaneous photosensitivity in the ... patients with C7orf11 mutations, together with the proteins nuclear localization, C7orf11 may be involved in transcription but ...
Research | Taatjes Lab | University of Colorado Boulder
Transcription Factors and PIC function Mediator is a common target of DNA-binding transcription factors (TFs) and also ... The Pre-Initiation Complex (PIC), which consists of Mediator, TFIIA, TFIIB, TFIID, TFIIE, TFIIF, TFIIH, and RNA polymerase II ( ... The Taatjes lab investigates the molecular mechanisms by which the human transcription machinery functions and is regulated. ... Structure and function of the RNA polymerase II transcription machinery. ...
Mouse Models for Xeroderma Pigmentosum Group A and Group C Show Divergent Cancer Phenotypes | Cancer Research | American...
... the XPC/HR23B complex will dissociate from the damaged DNA strand when the transcription factor TFIIH in combination with the ... The xeroderma pigmentosum group C protein complex XPC-HR23B plays an important role in the recruitment of transcription factor ... An important factor in the development of cancer is the accumulation of somatic DNA damage (1). Normally, several sophisticated ... Defective transcription-coupled repair in Cockayne syndrome B mice is associated with skin cancer predisposition. Cell ...
Saccharomyces cerevisiae displays a stable transcription start site landscape in multiple conditions | bioRxiv
... genes in eukaryotic cells is governed by the RNA polymerase II in concert with the general transcription initiation factors ( ... GTFs), namely TFIIA, TFIIB, TFIID, TFIIE, TFIIF and TFIIH (reviewed in (1)). These proteins assemble at the core promoter of a ... Regulation of gene transcription is one of the fundamental processes that determine cellular fate. Transcription of protein ... At the core promoter, the regulatory region containing the transcription start site (TSS), all inputs regulating transcription ...
Identifying cross-category relations in gene ontology and constructing genome-specific term association networks | BMC...
Yeast nucleotide excision repair proteins Rad2 and Rad4 interact with RNA polymerase II basal transcription factor b (TFIIH). ... The TATA-binding protein and associated factors are integral components of the RNA polymerase I transcription factor, SL1. Cell ... which encode subunits of transcription factor IIH, are required for nucleotide excision repair and RNA polymerase II ... Nikolov D, Burley S: RNA polymerase II transcription initiation: a structural view. P Natl Acad Sci USA. 1997, 94: 15-22. ...
CDK7 inhibitor THZ1 enhances antiPD-1 therapy efficacy via the p38α/MYC/PD-L1 signaling in non-small cell lung cancer | Journal...
... subunit of TFIIH regulates RNA polymerase-II-based transcription and promotes tumor progression. However, the mechanisms ... The general transcription factor TFIIH is recruited to start the transition from transcription initiation to early elongation, ... The general transcription factor TFIIH is an integral component of the RNA polymerase II pre-initiation complex, and it plays a ... Association of Cdk-activating kinase subunits with transcription factor TFIIH. Nature. 1995;374:280-2. ...
Spiral: Expression of CDK7, cyclin H and MAT1 is elevated in breast cancer and is prognostic in estrogen receptor positive...
TRANSCRIPTION FACTOR TFIIH. 4/6 INHIBITOR PALBOCICLIB. CELL-CYCLE. BIOLOGICAL SIGNIFICANCE. BIOMARKER ASSESSMENT. ANDROGEN ... as well as transcription factors such as estrogen receptor-α (ER). Deregulation of cell cycle and transcriptional control are ... Experimental Design: mRNA and protein expression of CDK7 and its essential co-factors cyclinH and MAT1, were evaluated in ... CDK7 also plays a critical role in regulating transcription, primarily by phosphorylating RNA polymerase II, ...
Comparative Medicine Institute - Works - Citation Index - NCSU Libraries
Transcription Factor TFIIH / metabolism; Transcription, Genetic / radiation effects; Ultraviolet Rays ... Time Factors; Transforming Growth Factor beta / metabolism ...
EOD33410 details
Cluster 200 details
transcription factor TFIIH core complex. 1.12% (1/89). 6.89. 0.008412. 0.038694. GO:0042803. protein homodimerization activity ... adenyl-nucleotide exchange factor activity. 1.12% (1/89). 6.89. 0.008412. 0.038694. GO:0008839. 4-hydroxy- ... THO complex part of transcription export complex. 1.12% (1/89). 7.89. 0.004215. 0.025204. ...
2019 - INMG - PGNM
Cell-type Specific Concentration Regulation of the Basal Transcription Factor TFIIH in XPB y/y Mice Model.. Lise-Marie Donnio 1 ... CSB-Dependent Cyclin-Dependent Kinase 9 Degradation and RNA Polymerase II Phosphorylation during Transcription-Coupled Repair. ...
7lbm.1 | SWISS-MODEL Template Library
Structure of the human Mediator-bound transcription pre-initiation complex ... General transcription factor IIF subunit 1: W. General transcription factor IIF subunit 2: X. TFIIH basal transcription factor ... General transcription factor IIH subunit 2: 4. General transcription factor IIH subunit 3: 5. General transcription factor IIH ... TFIIH basal transcription factor complex helicase XPD subunit: 1. General transcription factor IIH subunit 1: 2. General ...
Gene: AGAP008522 - Summary - Anopheles gambiae - Ensembl Genomes 57
Nucleotide excision repair in yeast is mediated by sequential assembly of repair factors and not by a pre-assembled repairosome...
... which include the multisubunit RNA polymerase II transcription factor TFIIH. Here, we examine whether NER occurs by sequential ... which include the multisubunit RNA polymerase II transcription factor TFIIH. Here, we examine whether NER occurs by sequential ... which include the multisubunit RNA polymerase II transcription factor TFIIH. Here, we examine whether NER occurs by sequential ... which include the multisubunit RNA polymerase II transcription factor TFIIH. Here, we examine whether NER occurs by sequential ...
Iron-containing proteins
TFIIH basal transcription factor complex helicase XPD subunit. 3.6.4.12. 40702. PF3D7_0923000. DNA-directed RNA polymerase II ...