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*  TATA Box-Binding Protein - CAGS
The TBP gene encodes TATA Box-Binding Protein, the DNA-binding subunit of the RNA polymerase II transcription factor D (TFIID ... Binding of the TFIID complex at the promoter helps in positioning of RNA Polymerase II and serves as a scaffold for the ... As the name suggests, the TBP subunit attaches to the DNA promoter at its TATA box, to initiate transcription. ... assembly of other polypeptides to the transcription complex. It also acts as a channel for regulatory signals. ...
http://www.cags.org.ae/ctga/details.aspx?id=2369&pg=10&se=Latest
*  Distinct gene-selective roles for a network of core promoter factors in Drosophila neural stem cell identity [RESEARCH ARTICLE]...
... action of activators and repressors is thought to ultimately converge on a highly conserved general transcription factor, TFIID ... 7F). Lastly, while the function of the transcription factors (dati, hng3, HmgZ, mamo, Hr4, bi, jim) that are co-regulated by ... Control of developmental gene expression is thought to rely on the combinatorial action of gene-specific transcription factors ... such as the transcription factors Chinmo, Klumpfuss (Berger et al., 2012), HmgD and the polarity protein Insc (Fig. ...
http://kalen2utech.com/distinct-gene-selective-roles-for-a-network-of-core-promoter-factors-in-drosophila-neural-stem-cell-identity-research-article/
*  Detection of Differentially Expressed Genes in Healing Mouse Corneas, Using cDNA Microarrays | IOVS | ARVO Journals
Transcription initiation factor (TFIID). D001034. −6. Brahma-related protein-1 (BRG1). S68108. ... Those genes included a variety of cytokine suppressors, transcription factors, cell adhesion molecules, cytokines, ... IL-10 has been identified as a cytokine synthesis inhibitory factor (CSIF) and is also known as macrophage deactivating factor. ... Platelet-derived growth factor receptor alpha precursor (PDGFR-α). M84607. 7. Macrohage inflammatory protein-2 alpha (MIP2-α). ...
http://iovs.arvojournals.org/article.aspx?articleid=2162813
*  Oalib search
it requires auxiliary factors called the general transcription factors, tfiia, tfiib, tfiid, tfiie, tfiif and tfiih. these ... as well as transcription factors in order to examine their function. The understanding of promoter complexity and transcription ... thus allowing the transcription machinery access to the promoters and initiate transcription. there exists factors which are ... The LysR Transcription Factor, HexS, Is Required for Glucose Inhibition of Prodigiosin Production by Serratia marcescens [PDF] ...
http://www.oalib.com/search?kw=%20transcription&searchField=keyword
*  Frontiers | High-Throughput Sequencing Reveals H2O2 Stress-Associated MicroRNAs and a Potential Regulatory Network in...
The expression patterns of seven representative miRNAs were verified by reverse transcription quantitative polymerase chain ... The expression patterns of seven representative miRNAs were verified by reverse transcription quantitative polymerase chain ... Oxidative stress in plants can be triggered by many environmental stress factors, such as drought and salinity. Brachypodium ... Oxidative stress in plants can be triggered by many environmental stress factors, such as drought and salinity. Brachypodium ...
https://www.frontiersin.org/articles/10.3389/fpls.2016.01567/full
*  Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes |...
... transcription factor IID (TFIID) contacts drive yeast ribosomal protein gene transcription. J Biol Chem 285: 15489-15499. ... and to sequester general transcription factors away from productive transcription complexes (Horiuchi et al, 1997). Mutations ... Kohler A, Pascual‐Garcia P, Llopis A, Zapater M, Posas F, Hurt E, Rodriguez‐Navarro S (2006) The mRNA export factor Sus1 is ... Auty R, Steen H, Myers LC, Persinger J, Bartholomew B, Gygi SP, Buratowski S (2004) Purification of active TFIID from ...
http://msb.embopress.org/content/7/1/503
*  dict.md | Growth of the protozoan parasite Entamoeba histolytica in 5-azacytidine has limited effects on parasite gene...
transcription initiation factor TFIID, putative. 266. 0/27. 254. 5/40. 97.m00140_at. 0.08. 3.10. 0.006. hypothetical protein. ... In the transcription initiation factor TFIID gene (115.m00143) we only identified methylation in the coding region and yet this ... transcription initiation factor TFIID (115.m00143), and a DNA mismatch repair protein gene (93.m00158). There are two other ... CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2 ...
http://www.dict.md/publication/growth-of-the-protozoan-parasite-entamoeba-histolytica-in-5-azacytidine-has-limited-effects-on-parasite-gene-expression
*  Loading controls
TBP is a component of the TFIID, a DNA-binding multiprotein transcription factor that in turn makes up part of the RNA ... TBP is a transcription factor that binds specifically to the TATA box. The TATA box is a DNA sequence found in the promoter ... It is also involved in transcription, RNA binding and transport, DNA replication and repair, as well as apoptosis and ER to ...
https://www.antibodies-online.com/resources/17/1217/loading-controls/
*  Gene Ontology Classifications
RNA polymerase II gene transcription as a component of a distinct subset of multi-subunit transcription initiation factor TFIID ... TATA-box binding protein associated factor 15. MGI:1917689 Go Annotations as Summary Text (Tabular View) (GO Graph). Summary ...
http://www.informatics.jax.org/go/marker/MGI:1917689
*  Freeze-frame Microscopy Captures Molecule's 'Lock-and-Load' on DNA - Biosciences Area
Eva Nogales led a team that captured freeze-frames of transcription factor IID as it locks onto DNA and loads genetic code- ... The molecule, called transcription factor IID (TFIID), is critical to transcribing genes into messenger RNA that will later be ... The transcription factor IID complex locks onto DNA, checks it's in the right place and then recruits other proteins to start ... Because of its many moving parts and large size, however, TFIID's 3D structure has been hard to capture, with the previous ...
http://biosciences.lbl.gov/2018/11/30/freeze-frame-microscopy-captures-molecules-lock-load-dna/
*  1jfi - Proteopedia, life in 3D
General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the ... Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) ... SL1 is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA.[8] ... in turn positions the penultimate alpha helix of NC2beta to block recognition of the TBP-DNA complex by transcription factor ...
http://proteopedia.org/wiki/index.php/1jfi
*  Cytotoxicity: Results Summary (selection of cytotoxic targets)
Transcription initiation factor TFIID subunit 1-like. 5.7633333333333. 5.687167206664. 3. 1. E3 ubiquitin-protein ligase TRIM33 ... Transcription initiation factor TFIID subunit 1. 4.8055555555556. 5.0221971276506. 9. 0.66666666666667. Inositol ... Eukaryotic initiation factor 4A-I. 6.472331419253. 5.5457811912301. 100. 0.73. POU domain- class 2- transcription factor 1. ... Complement factor D. 6.824793814433. 5.2579000934582. 776. 0.63659793814433. Signal transducer and transcription activator 6. ...
https://doctortarget.com/solutions/target-identification/cytotoxicity-results-summary-selection-cytotoxic-targets/
*  The maternal-to-zygotic transition: a play in two acts | Development
... a component crucial for the assembly of the transcription factor-II D (TFIID) and the RNA polymerase II complex, in the ... a crucial component in the assembly of the transcription factor-II D (TFIID) and the RNA polymerase II pre-initiation complex, ... the maternally loaded transcription factor Tramtrack (TTK) is a titratable repressor. TTK represses the transcription of the ... SWI/SNF complexes are recruited by transcription factors to clear nucleosomal DNA. When BRG1 is depleted, the transcription of ...
http://dev.biologists.org/content/136/18/3033
*  Dinah S. Singer, Ph.D. | Center for Cancer Research - National Cancer Institute
... class I gene depends on the general transcription factor TFIID, γ-interferon activated transcription depends instead on the ... However, in studies on regulatory transcription factors, we discovered that the usage of general transcription factors varies ... linking mitosis and transcription and 2) the transcription factor, TAF7, as a checkpoint regulator of early transcription. ... We continue to study the functions of these transcription factors.. The core promoter is defined as the segment of DNA where ...
https://ccr.cancer.gov/Experimental-Immunology-Branch/dinah-s-singer?qt-staff_profile_tabs=2
*  Tfg2p50
... role in the activation of fundamental transcription factor TFIID by the function of the transcription regulator factor. The ... The fundamental transcription factor TFIIA stabilizes the DNA binding of TATA box-binding protein (TBP). It also plays a very ...
http://metachem.co.uk/Toa1p250.htm
*  Freiman, Richard
The multi-protein complex TFIID is a general transcription factor at the core of the RNA polymerase II machinery. TFIID is ... Freiman RN Specific variants of general transcription factors regulate germ cell development in diverse organisms.. Biochimica ... A glutamine-rich trail leads to transcription factors.. Science. 2002; 296 (5576) : 2149-50. Full Text PubMed ... Ovarian-specific transcription networks regulated by the TFIID subunit TAF4b The major goal of this project is to elucidate the ...
https://vivo.brown.edu/display/rfreiman
*  Transcription factor TAFII250 phosphorylates the acidic domain of Mdm2 through recruitment of protein kinase CK2 | Springer for...
... including disruption of RNA polymerase II-mediated transcription. Both p53 itself... ... Previously, we showed that the basal transcription factor TAFII250, a critical component of TFIID, can interact with Mdm2 and ... 250 phosphorylates human transcription factor IIA on serine residues important for TBP binding and transcription activity. J ... Transcription factor TAFII250 phosphorylates the acidic domain of Mdm2 through recruitment of protein kinase CK2. ...
https://rd.springer.com/article/10.1007/s11010-008-9816-3
*  SMART: BROMO domain annotation
Crystal Structure of the second bromodomain of human Transcription initiation factor TFIID subunit 1 (TAF1). ... Crystal Structure of the tandem bromodomains of human Transcription initiation factor TFIID subunit 1 (TAF1). ... Acetylases are now known to modify a variety of proteins, including transcription factors, nuclear import factors and alpha- ... Here we report the solution structure of the bromodomain of the HAT co-activator P/CAF (p300/CBP-associated factor). The ...
http://smart.embl.de/smart/do_annotation.pl?DOMAIN=BROMO&START=1632&END=1766&E_VALUE=2.24e-10&TYPE=SMART&BLAST=RLALEKELQASLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQDEQQPLDLEGVKKRMDQGSYVSVLEFSDDIVKIIQAAINSDGGQPEIKKANSMVKSFFIRQMERVFP
*  Untitled Document
TFIID is not the only genteral transcription factor complex; RNA polymerase II requires others as well. TFIIB. TFIIE, TFIII and ... use transcription factors TBP and TFB, homologs of the eukaryotic transcription factors TBP and TFIIB, for the transcription of ... TRANSCRIPTION FACTORS. In eubacteria, RNA polymerase can bind to DNA and initiate transcription on its own. In eukaryotes, the ... Archebacteria seem to require transcription factors for transcription, suggesting links between archaeal and eukaryotic ...
http://bio.sunyorange.edu/updated2/GENETICS/5%20transcription%20factor%20intro.htm
*  Epigenetics and airways disease | Respiratory Research | Full Text
... the general transcription factor HATs, which include the TFIID subunit TAF250 (TBP-associated factor of 250 kDa); and the ... Barnes PJ, Karin M: Nuclear factor-kappaB: a pivotal transcription factor in chronic inflammatory diseases. N Engl J Med 1997, ... DNA methylation can repress transcription through several mechanisms including direct inhibition of transcription factor DNA ... Baldwin ASJ: Series introduction: the transcription factor NF-kappaB and human disease. J Clin Invest 2001, 107:3-6.PubMed ...
https://respiratory-research.biomedcentral.com/articles/10.1186/1465-9921-7-21
*  DNAtraffic - a database for systems biology of DNA metabolism and repair
transcription initiation factor TFIID subunit 9B) Homo sapiens L. (human) [HSA]. *TAF9B. Mus musculus L. (mouse) [MMU] ... TATA binding protein associated factor 21kDa subunit. TBP-ASSOCIATED FACTOR 9. DESCRIPTION:. putative TATA binding protein ... TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNI. ...
https://dnatraffic.ibb.waw.pl/protein/protein_detail/4346/
*  The Briarfield Chronicles: Promoter recognition
This allows TFIID to integrate signals from activators to core promoter.. Multiple subunits of the transcription factor IID ( ... Purified TFIID binds to SCP1 with high affinity. DNase I footprinting showed TFIID binds SCP1 with at least 10-fold higher ... When S. cerevisiae TFIIB and RNAPII were combined with other S. pombe basal factors, transcription initiated 40-120 bp ... This trend was not apparent with activated transcription.. Table 1. In Vivo Transcription and TBP Levels in the Presence of TBP ...
http://thebriarfieldchronicles.blogspot.com/2012/11/promoter-recognition.html
*  Biology
The general transcription factor IID (TFIID) is a critical component of the eukaryotic transcription preinitiation complex (PIC ... Structure of human TFIID and mechanism of TBP loading onto promoter DNA ... inactivation of the cullin 3 adapter protein-encoding leucine zipper like transcription regulator 1 (LZTR1) gene led... Cancer ...
https://parallelstate.com/biology
*  ApiLoc
PFE0305w (TBP) transcription initiation factor TFiid, TATA-binding protein *PFB0720c (ORC5) origin recognition complex subunit ... MAL7P1.86 (TFIIE) transcription initiation factor IIE, alpha subunit, putative *PFL0565w (j4) heat shock protein DNAJ homologue ... PFF0200c (SIP2) transcription factor with AP2 domain(s), putative,SPE2-interacting protein ...
http://apiloc.biochem.unimelb.edu.au/apiloc/apiloc/species/Plasmodium%20falciparum
*  Radish Genome Database
Rs487720 transcription initiation factor tfiid subunit 5-like [BLAST2GO] , TBP-associated factor 5 [AT5G25150]. Rs136770 dna- ... TBP-associated factor II 15 [AT4G31720]. Rs125780 transcription factor iib [BLAST2GO] , transcription factor IIB [AT2G41630]. ... TATA BOX ASSOCIATED FACTOR II 59 [AT1G04950]. Rs126170 transcription factor iib [BLAST2GO] , transcription factor IIB [ ... Rs426750 transcription initiation factor tfiid subunit 10-like [BLAST2GO] , TBP-associated factor II 15 [AT4G31720]. Rs188610 ...
http://radish-genome.org/Ontology/gene_ontology_detail.php?depth_1=1&depth_2=4&depth_3=3&depth_4=7&depth_5=178&go=0006366