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*  Compendium (software) - Wikipedia
Drag and drop documents and websites onto a map Complete freedom to arrange icons Keyword tagging Map and label the connections ... Create issue/problem templates Share learning pathways Organise large amounts of information Place resources in sequence to ... Official website "Compendium review: detailed look at Compendium mind mapping software". Graphic.org mind mapping software ...
https://en.wikipedia.org/wiki/Compendium_(software)
*  Tandy-12 - Wikipedia
Repeat - Follow a random sequence like in Simon. Torpedo - Fire torpedoes to sink enemy submarines. Tag-It - Try to catch 110 ... Directions for the game are still available on the Radio Shack website. The game had its packaging updated several times since ...
https://en.wikipedia.org/wiki/Tandy-12
*  NT5C3 - Wikipedia
1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807-28. doi:10.1101/gr.6.9.807. ... The active site is located in a cleft between the α/β-Rossmann-like domain and 4-helix bundle domain. NT5C3 is a member of the ... Three motifs in the α/β-Rossmann-like domain form the catalytic phosphate-binding site. Motif I is responsible for the 5′- ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/NT5C3
*  Site-specific recombinase technology - Wikipedia
In the following "knock-in" step, the tagged genomic sequence was replaced by homologous genomic sequences with certain ... These efforts mark the top of various "tag-and-exchange" strategies, which are dedicated to tagging a distinct genomic site ... Turan, S.; Bode, J. (2011). "Site-specific recombinases: From tag-and-target- to tag-and-exchange-based genomic modifications ... The tagging step per se may address certain classes of integration sites by exploiting integration preferences of retroviruses ...
https://en.wikipedia.org/wiki/Site-specific_recombinase_technology
*  TRAPPC2 - Wikipedia
1993). "Rapid cDNA sequencing (expressed sequence tags) from a directionally cloned human infant brain cDNA library". Nat. ... 2004). "Identification of three novel SEDL mutations, including mutation in the rare, non-canonical splice site of exon 4". ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... coding sequence are not a common cause of early primary osteoarthritis in men". Clin. Genet. 62 (1): 94-5. doi:10.1034/j.1399- ...
https://en.wikipedia.org/wiki/TRAPPC2
*  BDH1 - Wikipedia
1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807-28. doi:10.1101/gr.6.9.807. ... site-directed mutagenesis of a new recombinant fusion protein". Biochemistry. 39 (32): 9687-97. doi:10.1021/bi000274z. PMID ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/BDH1
*  FLAG-tag - Wikipedia
The peptide sequence of the FLAG-tag from the N-terminus to the C-terminus is: DYKDDDDK (1012 Da). Additionally, it may be used ... with the final tag encoding an enterokinase cleavage site). It can be fused to the C-terminus or the N-terminus of a protein, ... The FLAG-tag can be used in conjunction with other affinity tags, for example a polyhistidine tag (His-tag), HA-tag or myc-tag ... "Addition of an epitope to a protein coding sequence: FLAG-tag". The logic of molecular approaches to biological problems. ...
https://en.wikipedia.org/wiki/FLAG-tag
*  Knowledge extraction - Wikipedia
... mining Graphs Molecule mining Sequences Data stream mining Learning from time-varying data streams under concept drift Web Data ... model Metadata Metamodels Ontology Knowledge representation Knowledge tags Business rule Knowledge Discovery Metamodel (KDM) ... of 6th International Semantic Web Conference (ISWC 2007), 2nd Asian Semantic Web Conference (ASWC 2007), LNCS 4825, pages 225‐ ... For example, a column in a user table called marriedTo can be defined as symmetrical relation and a column homepage can be ...
https://en.wikipedia.org/wiki/Knowledge_extraction
*  ATP6V1G1 - Wikipedia
"Identification of genes expressed in human CD34+ hematopoietic stem/progenitor cells by expressed sequence tags and efficient ... The V1 domain contains the ATP catalytic site. The protein encoded by this gene is one of three V1 domain G subunit proteins. ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/ATP6V1G1
*  Oncogenomics - Wikipedia
... sequenced and mapped back to the reference genome to evaluate tag density. Bacterial Artificial Chromosome (BAC)-end sequencing ... On the other hand, decrease is thought to be caused by somatic point mutations in the replication origin site of the H-strand ... 2003). "End-sequence profiling: Sequence-based analysis of aberrant genomes". Proceedings of the National Academy of Sciences ... end-sequence profiling): Identifies chromosomal breakpoints by generating a BAC library from a cancer genome and sequencing ...
https://en.wikipedia.org/wiki/Oncogenomics
*  Restriction site associated DNA markers - Wikipedia
The most efficient way to find RAD tags is by high-throughput DNA sequencing, called RAD tag sequencing, RAD sequencing, RAD- ... The use of the flanking DNA sequences around each restriction site is an important aspect of RAD tags. The density of RAD tags ... disrupt restriction sites and lead to the absence of RAD tags or substantial DNA sequence polymorphisms that disrupt RAD tag ... The use of high-throughput sequencing to analyze RAD tags can be classified as reduced-representation sequencing, which ...
https://en.wikipedia.org/wiki/Restriction_site_associated_DNA_markers
*  Sequence-tagged site - Wikipedia
A sequence-tagged site (or STS) is a short (200 to 500 base pair) DNA sequence that has a single occurrence in the genome and ... Sequence-Tagged Sites (STS) description on NCBI Simple sequence length polymorphism. ... They are used in shotgun sequencing, specifically to aid sequence assembly. STSs are very helpful for detecting microdeletions ... For this reason they are useful for constructing genetic and physical maps from sequence data reported from many different ...
https://en.wikipedia.org/wiki/Sequence-tagged_site
*  Paired-end tag - Wikipedia
... or upon further sequencing (since tag sites are unique enough to serve as primer annealing sites). Paired-end tags (PET) exist ... linker sequence, a short 5' sequence tag, a short 3' sequence tag, and a short 3' linker sequence. It was shown conceptually ... On average, 20-30 tags could be sequenced with the Sanger method, which has a longer read length. Since the tag sequences are ... The cloning sites are flanked with adaptor sequences that contain restriction sites for endonucleases (discussed below). ...
https://en.wikipedia.org/wiki/Paired-end_tag
*  Epigenetics of physical exercise - Wikipedia
... the same region most transcription factors use to read a DNA sequence. A common epigenetic tag found in DNA is the covalent ... CpG sites in a gene are most commonly found in the promoter regions of a gene while also being present in non promoter regions ... Telomeres are repetitive sequences located at the end of chromosomes whose purpose are to slow the process of shortening and ... The CpG sites in non promoter regions tend to be constitutively methylated, causing transcription machinery to ignore them as ...
https://en.wikipedia.org/wiki/Epigenetics_of_physical_exercise
*  Immunomics - Wikipedia
The first set of clones were selected if identified expressed sequence tags (ESTs) were unique or enriched specifically in ... Epitope mapping identifies the sites of antibodies to which their target antigens bind. In the past, scientists would have to ... Only specific peptide sequences from some pathogen-specific antigens are needed to stimulate T- and B- cell responses; that is ... The 'immunome' of a pathogen is described by its set of epitopes, and can be defined by comparing genome sequences and applying ...
https://en.wikipedia.org/wiki/Immunomics
*  Restriction fragment length polymorphism - Wikipedia
"Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia". ... TRFLP works by PCR amplification of DNA using primer pairs that have been labeled with fluorescent tags. The PCR products are ... The sequence changes directly involved with an RFLP can also be analyzed more quickly by PCR. Amplification can be directed ... In allele "a", restriction site 2 has been lost by a mutation, so the probe now detects the larger fused fragment running from ...
https://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism
*  TANGO2 - Wikipedia
Expression data from Expressed Sequence Tag mapping, microarray and in situ hybridization show high expression for Homo sapiens ... 1] www.tango2.it - Disease website [2] www.tango2research.org - Research disease website -. ... It is characterized by the NRDE superfamily domain (DUF883), which is strictly known for the conserved amino acid sequence of ( ... sites of neuromuscular junctions, and in neurons. The NRDE (DUF883) domain, is a domain of unknown function spanning majority ...
https://en.wikipedia.org/wiki/TANGO2
*  Aldehyde tag - Wikipedia
demonstrate the application of the aldehyde tag as a chemical conjugation site for glycans. The aldehyde tag sequence was ... The 6-mer tag represents the small core consensus sequence and the 13-mer tag the longer full motif. The experiments on the ... The formylglycine tag or aldehyde tag is a convenient 6- or 13-amino acids long tag fused to a protein of interest. ... The size of the sequence is analogous to the commonly used 6x His-Tag and has the advantage that it can also be genetically ...
https://en.wikipedia.org/wiki/Aldehyde_tag
*  CCNB1IP1 - Wikipedia
1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807-28. doi:10.1101/gr.6.9.807. ... Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788-95 ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/CCNB1IP1
*  Duplex sequencing - Wikipedia
The extended double stranded adapters are cleaved by HpyCH4III at a specific restriction site located at 3' side of the tag ... duplex sequencing increases the accuracy of sequencing significantly. Duplex sequencing tagged adapters can be used in ... In the last step of duplex sequencing library preparation, Illumina sequencing adapters are added to the tagged double stranded ... complementary version of tag b and vice versa). The libraries containing duplex tags and Illumina adapters are sequenced using ...
https://en.wikipedia.org/wiki/Duplex_sequencing
*  Epitranscriptomic sequencing - Wikipedia
Current methods all use m6A-specific antibodies to tag m6A sites, but it has been reported that the antibodies contain ... 1 position to the m6A site (5' to the m6A site) in the sequence reads. Positive sites seen using m6A-CLIP and miCLIP had high ... cDNA sequences obtained by rtPCR can therefore be compared to the corresponding genomic sequences; in sites where A residues ... each of the three mixtures are sequenced on a next generation sequencing platform. The m6A levels per site or gene could be ...
https://en.wikipedia.org/wiki/Epitranscriptomic_sequencing
*  Shotgun sequencing - Wikipedia
A small radioactively or chemically labeled probe containing a sequence-tagged site (STS) can be hybridized onto a microarray ... The classical shotgun sequencing was based on the Sanger sequencing method: this was the most advanced technique for sequencing ... The clones are then sequenced from both ends using the chain termination method yielding two short sequences. Each sequence is ... Although shotgun sequencing can in theory be applied to a genome of any size, its direct application to the sequencing of large ...
https://en.wikipedia.org/wiki/Shotgun_sequencing
*  List of restriction enzyme cutting sites: Bd-Bp - Wikipedia
Cut: Cutting site and DNA products of the cut. The recognition sequence and the cutting site usually match, but sometimes the ... C decreases TAG 3'". Nucleic Acids Res. 19 (5): 1152. doi:10.1093/nar/19.5.1152. PMC 333798 . PMID 2020550. Azeddoug H, Reysset ... Recognition sequence: Sequence of DNA recognized by the enzyme and to which it specifically binds. ... A neoschizomer is a special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. ...
https://en.wikipedia.org/wiki/List_of_restriction_enzyme_cutting_sites:_Bd%E2%80%93Bp
*  GenBank - Wikipedia
Bulk submissions of Expressed Sequence Tag (EST), Sequence-tagged site (STS), Genome Survey Sequence (GSS), and High-Throughput ... Only original sequences can be submitted to GenBank. Direct submissions are made to GenBank using BankIt, which is a Web-based ... Sequence analysis UniProt List of sequenced eukaryotic genomes List of sequenced archaeal genomes RefSeq - the Reference ... The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their ...
https://en.wikipedia.org/wiki/GenBank
*  Third-generation sequencing - Wikipedia
These techniques involve tagging the DNA strand, breaking and filtering fragments that contain markers, followed by sequencing ... These advantages of third generation sequencing may be well-suited in hospital settings where quick and on-site data collection ... Third-generation sequencing (also known as long-read sequencing) is a class of DNA sequencing methods currently under active ... Second-generation sequencing, often referred to as Next-generation sequencing (NGS), has dominated the DNA sequencing space ...
https://en.wikipedia.org/wiki/Third-generation_sequencing