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*  A novel diagnostic method for malaria using loop-mediated isothermal amplification (LAMP) and MinION™ nanopore sequencer | BMC...
... peptide nucleic acid-locked nucleic acid mediated LAMP and real-time LAMP combined with fluorescent probes and melting or ... sequencing were consistent with the sequencing data of the constructed plasmids and the highest homology of reference sequences ... Nucleic Acids Res. 2015;43:e152.View ArticlePubMedPubMed CentralGoogle Scholar. ... with multiplex sequencing and streaming analysis of real-time sequencing data via the Rapid Barcoding Sequencing Kit. Therefore ...
https://bmcinfectdis.biomedcentral.com/articles/10.1186/s12879-017-2718-9/
*  Development of reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a diagnostic tool of Toxoplasma gondii...
Nucleic Acid Amplification Techniques/veterinary*. *RNA, Protozoan/genetics. *RNA, Ribosomal, 18S/genetics ... Sequence Read Archive (SRA). *Splign. *Trace Archive. *All Genomes & Maps Resources.... *Homology*BLAST (Basic Local Alignment ... In this study, we used a conserved sequence of 18s rRNA of Toxoplasma gondii to design primers for RT-LAMP test. The ...
https://www.ncbi.nlm.nih.gov/pubmed/23146414
*  Frontiers | Evaluation of Nucleic Acid Isothermal Amplification Methods for Human Clinical Microbial Infection Detection |...
Lactate dehydrogenase was chosen due to its relative low homology to all other known genetic sequences explored in silico and ... Nucleic Acid Template Preparation from Clinical Blood, Urine, Wound, Sputum, and Stool Samples. Blood Samples. Three milliliter ... Evaluation of Nucleic Acid Isothermal Amplification Methods for Human Clinical Microbial Infection Detection. Brett E. ... All clinical samples used in this study were stored at 4°C immediately after collection until nucleic acid template preparation ...
https://www.frontiersin.org/articles/10.3389/fmicb.2017.02211/full
*  Sequence Homology And Genetic Recombination Between 4q35 And 10q26 - Nucleic Acids
Fri, 21 Oct 2011 , Nucleic Acids There is a high level of sequence homology (98-100%) between D4Z4 repeats from the 4q35 and ... Sequence Homology And Genetic Recombination Between 4q35 And 10q26. ... DNA sequencing was successful in identifying a unique BluI restriction site present only in each copy of the 10q26-derived ... The high degree of homology between the 4q35 and the 10q26 D4F104S1 region is thought to have been responsible for ...
https://www.barnardhealth.us/nucleic-acids/sequence-homology-and-genetic-recombination-between-4q35-and-10q26.html
*  Center for Theoretical & Mathematical Sciences » People
Sequence Homology, Nucleic Acid • Serine • Serotonin • Serotonin Plasma Membrane Transport Proteins • Serotonin Receptor ... Folic Acid • Folic Acid Deficiency • Food • Food Deprivation • Formate-Tetrahydrofolate Ligase • Gene Expression • Gene ... Abdomen • Abscisic Acid • Acetaminophen • Acetylcholinesterase • Actins • Action Potentials • Adaptation, Biological • ... Pyrrolidonecarboxylic Acid • Quantitative Trait Loci • Quantitative Trait, Heritable • Raphe Nuclei • Rats • Receptor, Insulin ...
http://fds.duke.edu/db/aas/math/ctms/faculty/hfn
*  Rhabdomyosarcoma | Cancer Genetics Web
Sequence Homology, Nucleic Acid. *DUX4. *p53 Protein. *MDM2. *Cancer Gene Expression Regulation ... Using a luciferase reporting system and sequence analysis, the potential target of miR-411-5p was identified as sprouty homolog ... Here we studied 60 RMSs using whole-exome/-transcriptome sequencing, copy number (CN) and DNA methylome analyses to unravel the ... Given that the Pax3-Foxo1 fusion gene will contain all the regulatory sequences necessary for precise regulation of its ...
http://www.cancerindex.org/geneweb/X2002.htm
*  COL4A2 | Cancer Genetics Web
Molecular Sequence Data. *RNA. *Sequence Homology, Nucleic Acid. *Peptide Fragments. *Biomarkers, Tumor ... Multiplexed amplicon sequencing of PCR products from bisulfite-treated DNA of matched CRC and non-neoplastic tissue as well as ... Because there is no data available about the transcription factors which bind to ING1 promoter, the promoter sequence was ... qMSP assays were developed for 32 genes, including 15 of the sequenced genes, and used to quantify methylation in tumor, ...
http://www.cancerindex.org/geneweb/COL4A2.htm
*  SUZ12 | Cancer Genetics Web
Sequence Homology, Nucleic Acid. *Transfection. *Prostate Cancer. *Up-Regulation. *RTPCR. *Polycomb Repressive Complex 2 ... Nucleic Acids Res. 2015; 43(13):6270-84 [PubMed] Free Access to Full Article Related Publications ... In this study, we performed whole-exome sequencing, transcriptome sequencing and copy number profiling for five ESSs (three low ... which was further confirmed by cloning and direct sequencing of DNA from uncultured cells. Finally, direct sequencing of ...
http://www.cancerindex.org/geneweb/SUZ12.htm
*  Monophyletic origin and unique dispersal patterns of domestic fowls.
... we have determined mtDNA sequences of the D-loop regions for a total of 21 birds, of which 12 samples belong to red junglefowl ... Molecular Sequence Data. Multigene Family. Phylogeny*. Poultry / genetics*. Sequence Homology, Nucleic Acid. Species ... Base Sequence. Birds / genetics. Coturnix / genetics. DNA, Mitochondrial. ... we have determined mtDNA sequences of the D-loop regions for a total of 21 birds, of which 12 samples belong to red junglefowl ...
http://www.biomedsearch.com/nih/Monophyletic-origin-unique-dispersal-patterns/8692897.html
*  DAPK2 | Cancer Genetics Web
Sequence Homology, Nucleic Acid. *CDC42. *Ubiquitin-Protein Ligases. *Messenger RNA. *Polymerase Chain Reaction ... Activation of fatty acid synthase (FASN) enzyme in the de novo lipogenic pathway has been reported in various cancers including ... MS-HRM methods for CCND2, MGMT and RASSF1A were developed in-house, primer sequences for DAPK1, GSTP1 and HIN-1 have already ... fatty acid metabolism, gene transcription, histone methylation, iron transport, stress response, cell cycle, and apoptosis.. ...
http://www.cancerindex.org/geneweb/DAPK2.htm
*  ODC1 | Cancer Genetics Web
Sequence Homology, Nucleic Acid. *Smoking. *Risk Factors. *Esophageal Cancer. *Uridine. *Spermine. *Transfection ... After microarray hybridization, clones sequencing, sequence homology search, the information of differently expressed genes in ... After microarray hybridization, sequence homology search, 19 differentially expressed genes were observed. After real-time ... Lentiviruses containing these sequences were injected directly into the prostates of PTEN(-/-) (tumor-bearing) and control mice ...
http://www.cancerindex.org/geneweb/ODC1.htm
*  anti-Cytochrome C Primary Antibodies
5' flanking region: amino acid sequence; nucleic acid sequence homology) * Tissue expression profile analysis revealed that ...
https://www.antikoerper-online.de/apoptose-pathway-9/cytochrome-c-antibody-2985/
*  Identification and characterization of the herpes simplex virus type 1 protein encoded by the UL37 open reading frame. |...
Sequence Homology, Nucleic Acid. *Simplexvirus (enzymology, genetics) *Transcription, Genetic. *Vero Cells. *Viral Proteins ( ... In addition, computer-assisted analysis revealed a potential ATP-binding domain in the predicted UL37 amino acid sequence. On ...
http://www.curehunter.com/public/pubmed2173782.do
*  MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis | BMC Bioinformatics | Full Text
Nucleic Acids Res. 2009; 37:166-9.View ArticleGoogle Scholar. *. Sartor MA, Ade A, Wright Z, States D, Omenn GS, Athey B, et al ... we conducted a sequence homology search of these minor organisms against the major organisms and then applied the MeSH IDs of ... Nucleic Acids Res. 2008; 37:619-22.View ArticleGoogle Scholar. *. Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, ... Nucleic Acids Res. 2012; 41:64-69.View ArticleGoogle Scholar. *. Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, ...
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0453-z
*  MiR-139-5p inhibits CRC invasion via directly targeting | Open-i
Sequence Homology, Nucleic Acid. *Survival Analysis. *Xenograft Model Antitumor Assays. Related in: MedlinePlus ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4225484_13238_2014_93_Fig5_HTML&req=4
*  Examples of RT-PCR products on 2% agarose gel. Results | Open-i
Sequence Homology, Nucleic Acid*. *Transcriptome/drug effects*. *Werner Syndrome/genetics*. Minor. *Animals ... Such genes significantly affected the metabolism of lipid, cellular ketone, organic acid, and carboxylic acids. Vitamin C, in ... Such genes significantly affected the metabolism of lipid, cellular ketone, organic acid, and carboxylic acids. Vitamin C, in ... The RT-PCR results are shown in Table 2 and the sequences of the primers are provided in the Additional file2: Table S2. Every ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4221712_12864_2014_6625_Fig2_HTML&req=4
*  Pairwise nucleotide differences (pd) between the two Me | Open-i
Sequence Homology, Nucleic Acid*. *X Chromosome/genetics*. *Y Chromosome/genetics*. Minor. *Alleles ... To address this apparent paradox, we extended the phylogeographic scope of investigations, by analyzing the sequences of three ... To address this apparent paradox, we extended the phylogeographic scope of investigations, by analyzing the sequences of three ... Range-wide sex-chromosome sequence similarity supports occasional XY recombination in European tree frogs (Hyla arborea). ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4043726_pone.0097959.g002&req=4
*  Methylation of hsa-miR-203 in primary samples. (A) Sequ | Open-i
A) Sequence analysis of the M-MSP product from bisulphite-treated DNA showed that the cytosine [C] residues of C ... Sequence Homology, Nucleic Acid. *Young Adult. Related in: MedlinePlus. © Copyright Policy Related In: Results - Collection ... A) Sequence analysis of the M-MSP product from bisulphite-treated DNA showed that the cytosine [C] residues of CpG ... Mentions: Direct sequencing of the M-MSP products from the methylated primary samples showed the expected nucleotide changes ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4373446_jcmm0015-2760-f2c&req=4
*  Sampling localities (a) and haplotype networks of Smarc | Open-i
Sequence Homology, Nucleic Acid*. *X Chromosome/genetics*. *Y Chromosome/genetics*. Minor. *Alleles ... To address this apparent paradox, we extended the phylogeographic scope of investigations, by analyzing the sequences of three ... To address this apparent paradox, we extended the phylogeographic scope of investigations, by analyzing the sequences of three ... Range-wide sex-chromosome sequence similarity supports occasional XY recombination in European tree frogs (Hyla arborea). ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4043726_pone.0097959.g001&req=4
*  AMFR and NOTCH1 are the direct target genes of miR-139- | Open-i
Sequence Homology, Nucleic Acid. *Survival Analysis. *Xenograft Model Antitumor Assays. Related in: MedlinePlus ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4225484_13238_2014_93_Fig3_HTML&req=4
*  Expression stability and ranking of housekeeping genes | Open-i
Sequence Homology, Nucleic Acid. *Transgenes. © Copyright Policy - open-access Related In: Results - Collection ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC3750715_1756-0500-6-312-4&req=4
*  Studying RNA Homology and Conservation with Infernal: From Single Sequences to RNA Families - Current Protocols
... sequences identified in a wide variety of organisms ... Homology search with fragmented nucleic acid sequence patterns ... Nucleic Acids Res. 36:W5‐W9. doi: 10.1093/nar/gkn201.. Jossinet, F. and Westhof, E. 2005. Sequence to Structure (S2S): Display ... Nucleic Acids Res. 42:D764‐D770. doi: 10.1093/nar/gkt1168.. Katoh, K. and Standley, D.M. 2013. MAFFT multiple sequence ... Software.ncrna.org: Web servers for analyses of RNA sequences. Nucleic Acids Res. 36:W75‐W78. doi: 10.1093/nar/gkn222. ...
http://www.currentprotocols.com/WileyCDA/CPUnit/refId-bi1213.html?quicktabs_cp=cited
*  a. PIP (percentage identity plot) diagram for human and | Open-i
The horizontal axis represents the human genomic sequence and has been annotated to show t ... Molecular Sequence Data. *Mutation/genetics. *Oocytes/chemistry/enzymology/metabolism. *Pregnancy. *Sequence Homology, Nucleic ... The horizontal axis represents the human genomic sequence and has been annotated to show the position of the novel exon 1o, ... The horizontal axis represents the human genomic sequence and has been annotated to show the position of the novel exon 1o, ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC149328_1471-2156-4-2-1&req=4
*  Patterns of gain and loss of target genes in miR1448 mi | Open-i
... of gain and loss of target genes in miR1448 miRNAs.For the four nucleotide mutations that occurred in the mature sequence of ... Molecular Sequence Data. *Multigene Family. *Oryza/genetics. *RNA Folding. *Sequence Homology, Nucleic Acid ... Mentions: Mature sequences of miR482.2 and miR1448 both target the sequences encoding the "MGGV(L)GK" peptide in the NB-ARC ... Mentions: Mature sequences of miR482.2 and miR1448 both target the sequences encoding the "MGGV(L)GK" peptide in the NB-ARC ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC3475693_pone.0047811.g006&req=4
*  The Concentric circle of Rosaceae genomes. The innermos | Open-i
Sequence Homology, Nucleic Acid. © Copyright Policy - open-access Related In: Results - Collection ... Results: Our analysis using the whole genome sequences of peach, apple and strawberry identified 1399 orthologous regions ... Results: Our analysis using the whole genome sequences of peach, apple and strawberry identified 1399 orthologous regions ... have been sequenced, allowing in-depth comparison of these genomes. ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC3368713_1471-2164-13-129-5&req=4