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*  OPCML - Wikipedia
Dec 1993). "A sequence-tagged site map of human chromosome 11". Genomics. 17 (3): 699-725. doi:10.1006/geno.1993.1392. PMID ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... Shark KB, Lee NM (1995). "Cloning, sequencing and localization to chromosome 11 of a cDNA encoding a human opioid-binding cell ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/OPCML
*  DPAGT1 - Wikipedia
Dec 1993). "A sequence-tagged site map of human chromosome 11". Genomics. 17 (3): 699-725. doi:10.1006/geno.1993.1392. PMID ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
https://en.wikipedia.org/wiki/DPAGT1
*  EcoRV - Wikipedia
The complementary sequence is then 3'-CTA,TAG-5'. The ends are blunt and can be ligated into a blunt cloning site easily but ... The structure of this enzyme, and several mutants, in complex with the DNA sequence which it cuts has been solved by X-ray ... Initially the enzyme binds weakly to a non-specific site on the DNA. It randomly walks along the molecule until the specific ... recognition site is found. EcoRV has a high specificity for its target DNA sequence. Binding of the enzyme induces a ...
https://en.wikipedia.org/wiki/EcoRV
*  FABP2 - Wikipedia
1993). "The development of sequence-tagged sites for human chromosome 4". Hum. Mol. Genet. 2 (8): 1271-88. doi:10.1093/hmg/2.8. ... Isolation of a full length cDNA and comparative sequence analyses of orthologous and paralogous proteins". J. Biol. Chem. 260 ( ...
https://en.wikipedia.org/wiki/FABP2
*  40S ribosomal protein S25 - Wikipedia
Miwa T, Sudo K, Nakamura Y, Imai T (1993). "Fifty sequenced-tagged sites on human chromosome 11". Genomics. 17 (1): 211-4. doi: ... Imai T, Sudo K, Miwa T (1994). "Assignment of the human ribosomal protein S25 gene (RPS25) to chromosome 11q23.3 by sequence ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2002). "The human ribosomal protein genes: sequencing and comparative analysis of 73 genes". Genome Res. 12 (3): 379-90. doi: ...
https://en.wikipedia.org/wiki/40S_ribosomal_protein_S25
*  BBS5 - Wikipedia
1997). "Generation and analysis of 280,000 human expressed sequence tags". Genome Res. 6 (9): 807-28. doi:10.1101/gr.6.9.807. ... Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788-95 ... 2004). "Sequence Comparison of Human and Mouse Genes Reveals a Homologous Block Structure in the Promoter Regions". Genome Res ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ...
https://en.wikipedia.org/wiki/BBS5
*  PPP1R7 - Wikipedia
"Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat Genet. 10 (4): 415-23. doi:10.1038/ng0895-415. ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635-48. doi:10.1016/ ...
https://en.wikipedia.org/wiki/PPP1R7
*  GCN5L2 - Wikipedia
"Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat. Genet. 10 (4): 415-23. doi:10.1038/ng0895-415 ...
https://en.wikipedia.org/wiki/GCN5L2
*  ZC3HC1 - Wikipedia
"Shotgun sequencing of the human transcriptome with ORF expressed sequence tags". Proceedings of the National Academy of ... Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (November 2006). "Global, in vivo, and site-specific ... Hartley JL, Temple GF, Brasch MA (November 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 ... NLS sequence) while a 96-residue region (amino acids 306-402) is proposed to serve as the phosphotyrosine-binding domain. NIPA ...
https://en.wikipedia.org/wiki/ZC3HC1
*  SETMAR - Wikipedia
1995). "Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat. Genet. 10 (4): 415-23. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353-8. doi:10.1101/gr.7.4.353. PMC 139146 . PMID 9110174 ...
https://en.wikipedia.org/wiki/SETMAR
*  Webtag - Wikipedia
This web based service builds on the Tagenerator tool, but is very fast because all tags are pre-generated and stored in a ... Techniques such as RS-PCR and (EXACT) RT-PCR are based on the integration of such tags (unique sequences not present in genomic ... Lopes Pinto, Fernando; HÃ¥kan Svensson; Peter Lindblad (2007-10-25). "Webtag: a new web tool providing tags/anchors for RT-PCR ... The possibility of using tags whose sequences are not found in the genome further improves reverse specific polymerase chain ...
https://en.wikipedia.org/wiki/Webtag
*  BTBD1 - Wikipedia
"Shotgun sequencing of the human transcriptome with ORF expressed sequence tags". Proceedings of the National Academy of ... Hartley JL, Temple GF, Brasch MA (Nov 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11 ... sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Research. 11 (3): 422-35. doi:10.1101/gr. ... "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Reports. 1 (3): 287-92. ...
https://en.wikipedia.org/wiki/BTBD1
*  APOA4 - Wikipedia
de Temmerman P, Visvikis S, Boerwinkle E, Siest G (1990). "Study of the sequence tagged site (STS) in the beginning of human ... a sequence polymorphism has also been identified in the 3'UTR of the third exon. Intra-species comparative gene sequence ... 1992). "Nonsynonymous polymorphic sites in the apolipoprotein (apo) A-IV gene are associated with changes in the concentration ... 1986). "The nucleotide and derived amino acid sequence of human apolipoprotein A-IV mRNA and the close linkage of its gene to ...
https://en.wikipedia.org/wiki/APOA4
*  Coccolith - Wikipedia
Cocco Express - Coccolithophorids Expressed Sequence Tags (EST) & Microarray Database Possible functions of Coccoliths. ... ISBN 978-0-323-13827-7. The EHUX website - site dedicated to Emiliania huxleyi, containing essays on blooms, coccolith function ... International Nannoplankton Association site - includes an illustrated guide to coccolith terminology and several image ...
https://en.wikipedia.org/wiki/Coccolith
*  Yeast artificial chromosome - Wikipedia
Also, due to the nature of the reliance on sequence tagged sites (STS) as a reference point when selecting appropriate clones, ... "Mapping human chromosomes by walking with sequence-tagged sites from end fragments of yeast artificial chromosome inserts". ... 2. Ligation of necessary centromeric sequences for mitotic stability 3. Ligation of Autonomously Replicating Sequences (ARS) ... the sequence as determined from the YAC clone is different from the original, natural sequence, leading to inconsistent results ...
https://en.wikipedia.org/wiki/Yeast_artificial_chromosome
*  4EGI-1 - Wikipedia
... a small peptide of a known sequence was synthesized and tagged with a fluorescent molecule. This traceable peptide of sequence ... that would displace a fluorescein-labeled peptide derived from the eIF4G sequence that binds to the eIF4E form at the same site ... The sequence of 4EGI-1 was such that it displaced the labeled peptide, thus demonstrating its affinity for the complex binding ... eIF4E BPs (4E-BPs), as small polypeptides, consist of the same amino acid sequence as the portion of eIF4G that interacts with ...
https://en.wikipedia.org/wiki/4EGI-1
*  Trans-Spliced Exon Coupled RNA End Determination - Wikipedia
These tags are then amplified by PCR with primers containing a mismatch changing the Bpm1 site to a Xho1 site. The amplicons ... CAGE has shown tags with addition of a guanine on the first position and oligo-capping may lead to sequence bias due to the use ... end of the messenger RNA require the presence of a trans-spliced leader sequence. Spliced leader sequences are short sequences ... These tagged cDNAs are then cleaved 14 bp downstream from the recognition site using BpmI restriction endonuclease and blunt ...
https://en.wikipedia.org/wiki/Trans-Spliced_Exon_Coupled_RNA_End_Determination
*  Transposons as a genetic tool - Wikipedia
If a new phenotype is observed, the genome is sequenced and searched for tagged transposons. If the site of transposon ... Naturally occurring P elements contain: coding sequence for the enzyme transposase; recognition sequences for transposase ... This sequence was then added inserted into a plasmid and introduced into the cells of the mice. The transposase from Sleeping ... In STM, specially tagged transposons are inserted into an organism, such as a bacterium, and randomly integrated into the host ...
https://en.wikipedia.org/wiki/Transposons_as_a_genetic_tool
*  TRIOBP - Wikipedia
2001). "Identification of novel transcribed sequences on human chromosome 22 by expressed sequence tag mapping". DNA Res. 8 (1 ... Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788-95 ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 1999). "The DNA sequence of human chromosome 22". Nature. 402 (6761): 489-95. doi:10.1038/990031. PMID 10591208. ...
https://en.wikipedia.org/wiki/TRIOBP
*  TIM/TOM complex - Wikipedia
These are tagged by an N-terminal signal sequence. Following transport through the cytosol from the nucleus, the signal ... which are hypothesized to be transiently linked at sites of close contact between the two membranes. The signal sequence is ... The signal sequence and adjacent portions of the polypeptide chain are inserted in the TOM complex, then begin interaction with ... sequence is recognized by a receptor protein in the translocase of the outer membrane (TOM) complex. ...
https://en.wikipedia.org/wiki/TIM/TOM_complex
*  Primer Premier - Wikipedia
Premier software supports motif analysis and ORF search along with finding restriction cut sites on the nucleotide sequence. ... The software also designs tagged and nested primers for multiplex PCR reactions. The Primer ... The software has a built-in nucleotide-protein and protein-nucleotide sequence translator which can be used for designing ... The software supports design of degenerate primers on alignments for amplifying related set of nucleotide sequences for ...
https://en.wikipedia.org/wiki/Primer_Premier
*  Gene map - Wikipedia
A sequence tagged site (STS) is a short sequence of DNA (about 100 - 500 base pairs in length) that is seen to appear multiple ... as they differ from other sequences). Sequenced tagged sites can be mapped within our genome and require a group of overlapping ... and Sequence tagged site (STS) mapping. Restriction mapping is a method in which structural information regarding a segment of ... These sites are easily recognizable, usually appearing at least once in the DNA being analyzed. These sites usually contain ...
https://en.wikipedia.org/wiki/Gene_map
*  ChIA-PET - Wikipedia
The purified DNA is then digested by MmeI, which cuts at a distance from its recognition site to release the tag-linker-tag ... PET-Tool A software suite for processing and managing of Paired-End di-Tag sequence data.[3] ChIA-PET Tool A software suite for ... The two tags of an inter-ligation PETs do not have fixed tag orientations, might not be found on the same strands, might have ... ChIA-PET is compatible with tag-based next-generation sequencing approaches such as Roche 454 pyrosequencing, Illumina GA, ABI ...
https://en.wikipedia.org/wiki/ChIA-PET
*  JPH2 - Wikipedia
Kim J, Bhinge AA, Morgan XC, Iyer VR (2005). "Mapping DNA-protein interactions in large genomes by sequence tag analysis of ... 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635-48. doi:10.1016/ ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 2002). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865-71. doi:10.1038/414865a. ...
https://en.wikipedia.org/wiki/JPH2
*  Contig - Wikipedia
One common strategy is to use sequence-tagged site (STS) content mapping to detect unique DNA sites in common between BACs. The ... In bottom-up sequencing projects, a contig refers to overlapping sequence data (reads); in top-down sequencing projects, contig ... In this sequencing method, a low-resolution map is made prior to sequencing in order to provide a framework to guide the later ... The subsequent sequence reads, which are the data that contain the sequences of the small fragments, are put into a database. ...
https://en.wikipedia.org/wiki/Contig