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*  Frontiers | Function of Plant DExD/H-Box RNA Helicases Associated with Ribosomal RNA Biogenesis | Plant Science
DExD/H-box RHs are found in most organisms and play critical roles in a variety of RNA-involved cellular events. In human and ... DExD/H-box RHs are found in most organisms and play critical roles in a variety of RNA-involved cellular events. In human and ... RHs are a family of ATPases that rearrange the secondary structures of RNA and thus remodel ribonucleoprotein (RNP) complexes. ... RHs are a family of ATPases that rearrange the secondary structures of RNA and thus remodel ribonucleoprotein (RNP) complexes. ...
https://www.frontiersin.org/articles/10.3389/fpls.2018.00125/full
*  Intranuclear Accumulation of Rna Resembling the Smaller Ribosomal Rna Component | Journal of Cell Science
Intranuclear Accumulation of Rna Resembling the Smaller Ribosomal Rna Component Message Subject (Your Name) has sent you a ...
http://jcs.biologists.org/content/6/1/53.article-info
*  Physical mapping of 5S and 18S-26S ribosomal RNA gene families in Allium victorialis var. platyphyllum | SpringerLink
Detection of ribosomal RNA genes in soybean,Glycine max (L.) Merr., byin situ hybridization.Genome 32: 1091-1095.Google Scholar ... Cloning and characterisation of ribosomal RNA genes from wheat and barley.Nucleic Acids Res. 7: 1869-1885.PubMedCrossRefGoogle ... Ribosomal RNA multigene loci: nomads of the Triticeae genomes.Genetics 140: 1367-1377.PubMedGoogle Scholar ... Physical mapping of ribosomal RNA genes inAegilops andTriticum.In Proceedings of the 8th International Wheat Genetics Symposium ...
https://link.springer.com/article/10.1007%2FBF03030246
*  B chromosomes showing active ribosomal RNA genes contribute insignificant amounts of rRNA in the grasshopper Eyprepocnemis...
Sollner-Webb B, Tower J (1986) Transcription of cloned eukaryotic ribosomal RNA genes. Annu Rev Genet 55:801-830Google Scholar ... B chromosomes showing active ribosomal RNA genes contribute insignificant amounts of rRNA in the grasshopper Eyprepocnemis ... Reeder RH (1999) Regulation of RNA polymerase I transcription in yeast and vertebrates. Prog Nucl Acid Res Mol Biol 62:293-327 ... Ruiz-Estévez M, López-León MD, Cabrero J, Camacho JPM (2013) Ribosomal DNA is active in different B chromosome variants of the ...
https://link.springer.com/article/10.1007%2Fs00438-014-0880-y
*  Typical speed of ribosomal RNA transcription - Bacteria Escherichia coli - BNID 112327
Abstract:'Here, [investigators] report a genome-wide RNA degradation study in Escherichia coli using RNA-seq, and present ... A few of the mRNA transcription rates are in the range of speeds typically associated with ribosomal RNA transcription (~70 nt/ ... Roberts JW, Shankar S, Filter JJ (2008) RNA polymerase elongation factors. Annu Rev Microbiol 62: 211-233 doi: 10.1146/annurev. ... residual RNA synthesis, a delay in the interruption of steady state that is dependent on distance relative to the mRNA's 5' end ...
https://bionumbers.hms.harvard.edu/bionumber.aspx?s=n&v=2&id=112327
*  Ribosomal RNA N-glycosylase Activity Assay of ...
The following protocol describes a method to detect the RNA fragment released when the RIP-treated apurinic RNA from rabbit ... then the RNA concentration is 40 µg RNA/ml. Usually the yield of the process is 45-50 µg RNA for samples treated with aniline ... Ribosomal RNA N-glycosylase Activity Assay of Ribosome-inactivating Proteins Edited by. Zhaohui Liu ... RNA precipitation. * To carry out RNA precipitation with 3 volumes of ethanol in 1.5 ml tubes, the aqueous phase is split into ...
https://bio-protocol.org/e2180
*  Depletion of Ribosomal RNA Sequences from Single‐Cell RNA‐Sequencing Library - Current Protocols
... cell RNA sequencing technologies have revealed high heterogeneity of gene expression profiles in individual cells ... Keywords: ribosomal RNA depletion; RNA‐seq library construction; single cell RNA sequencing; whole transcriptome amplification ... but also ribosomal RNA (rRNA). rRNA comprises more than 90% of the total RNA and should be depleted from the RNA‐seq library to ... Comparison of RNA‐Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling. BMC Genomics ...
http://www.currentprotocols.com/WileyCDA/CPUnit/refId-mb0727.html?quicktabs_cp=abstract
*  Nuclear ErbB2 Enhances Translation and Cell Growth by Activating Transcription of Ribosomal RNA Genes | Cancer Research
RNA Pol I). Nuclear ErbB2 physically associates with β-actin and RNA Pol I, coinciding with active RNA Pol I transcription ... Nuclear ErbB2 Enhances Translation and Cell Growth by Activating Transcription of Ribosomal RNA Genes. Long-Yuan Li, Hsiuyi ... Nuclear ErbB2 increases RNA Pol I transcription in vivo. To address whether nuclear ErbB2 plays a role in RNA Pol I ... ErbB2 forms a complex with β-actin and RNA Pol I. Although nuclear β-actin has been known to be associated with RNA Pol I and ...
http://cancerres.aacrjournals.org/content/71/12/4269.long
*  Canonical and Non-canonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing | Plant Cell
Canonical and Non-canonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing. Xiangsong Chen, Li Lu, ... Canonical and Non-canonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing ... Using RNA immunoprecipitation and sequencing, we further uncovered a non-canonical mechanism of HD2C directly associating with ... pre-rRNA and small nucleolar RNAs to regulate rRNA methylation. Together, this study reveals a multifaceted role of HD2C in ...
http://www.plantcell.org/content/early/2018/01/17/tpc.17.00626
*  The Drosophila melanogaster gene brain tumor negatively regulates cell growth and ribosomal RNA synthesis | Development
... and have more ribosomal RNA than wild-type cells. Furthermore, brat overexpressing cells contain less ribosomal RNA than ... brat inhibits ribosomal RNA accumulation. Because brat mutant wing imaginal disc cells contained more rRNA than control cells ( ... Frank, D. J. and Roth, M. B. (1998). ncl-1 is required for the regulation of cell size and ribosomal RNA synthesis in ... Our results demonstrate that brat functions to repress ribosomal RNA synthesis and cell growth. We found that brat mutant cells ...
http://dev.biologists.org/content/129/2/399
*  NASA Technical Reports Server (NTRS) - Sequence of the 16S ribosomal RNA from Halobacterium volcanii, an archaebacterium
The sequence of the 16S ribosomal RNA (rRNA) from the archaebacterium Halobacterium volcanii has been determined by DNA ... Sequence of the 16S ribosomal RNA from Halobacterium volcanii, an archaebacterium. Author and Affiliation:. Gupta, R.. ( ... The sequence of the 16S ribosomal RNA (rRNA) from the archaebacterium Halobacterium volcanii has been determined by DNA ...
https://ntrs.nasa.gov/search.jsp?R=19830059696&hterms=Nucleotide+Sequence&qs=Ntx%3Dmode%2Bmatchall%26Ntk%3DAll%26N%3D0%26No%3D30%26Ntt%3DNucleotide%2BSequence
*  Effect of dietary zinc deficiency on 5S ribosomal RNA synthesis in rats | Biochemical Society Transactions
Effect of dietary zinc deficiency on 5S ribosomal RNA synthesis in rats. JOHN K. CHESTERS, LINDA PETRIE ... Effect of dietary zinc deficiency on 5S ribosomal RNA synthesis in rats ... Effect of dietary zinc deficiency on 5S ribosomal RNA synthesis in rats ... Effect of dietary zinc deficiency on 5S ribosomal RNA synthesis in rats ...
http://www.biochemsoctrans.org/content/15/5/846.1
*  Molecules | Free Full-Text | Selection of Peptides Targeting Helix 31 of Bacterial 16S Ribosomal RNA by Screening M13 Phage...
Structural changes in ribosomal RNA can be facilitated by the presence of modified nucleotides. Helix 31 of bacterial 16S ... ribosomal RNA harbors two modified nucleotides, m2G966 and m5C967, that are highly conserved among bacteria, though the degree ... Contacts between helix 31 and the P-site tRNA, initiation factors, and ribosomal proteins highlight the importance of this ... and were also shown to bind 30S ribosomal subunits. These peptides also inhibited protein synthesis in cell-free translation ...
https://www.mdpi.com/1420-3049/16/2/1211
*  Identification of bacteria synthesizing ribosomal RNA in response to uranium addition during biostimulation at the Rifle, CO...
Title: Identification of bacteria synthesizing ribosomal RNA in response to uranium addition during biostimulation at the Rifle ... Accepted Manuscript: Identification of bacteria synthesizing ribosomal RNA in response to uranium addition during ... ribosomal RNA; sulfates; bacteria; ribosomes; bromides; reverse transcriptase-polymerase chain reaction; sulfides. OSTI ... Since RNA content often increases with growth rate, our findings suggest it is possible to rapidly elucidate active bacteria ...
https://www.osti.gov/pages/biblio/1223863-identification-bacteria-synthesizing-ribosomal-rna-response-uranium-addition-during-biostimulation-rifle-co-integrated-field-research-site
*  LARGE SEQUENCE HETEROGENEITY OF THE SMALL SUBUNIT RIBOSOMAL RNA GENE OF PLASMODIUM OVALE IN CAMBODIA | The American Journal of...
Using a species-specific polymerase chain reaction (PCR) targeting the small subunit (SSU) ribosomal RNA (rRNA) gene, we ... f LARGE SEQUENCE HETEROGENEITY OF THE SMALL SUBUNIT RIBOSOMAL RNA GENE OF PLASMODIUM OVALE IN CAMBODIA * SANDRA INCARDONA1, ... Primary sequences of two small subunit ribosomal RNA genes from Plasmodium falciparum. Mol Biochem Parasitol 28 : 63-68.. [ ... Regulation and trafficking of three distinct 18S ribosomal RNAs during development of the malaria parasite. J Mol Biol 269 : ...
http://www.ajtmh.org/content/journals/10.4269/ajtmh.2005.72.719
*  Determination of basic chromosome numbers in the genus Saccharum by physical mapping of ribosomal RNA genes
Determination of basic chromosome numbers in the genus Saccharum by physical mapping of ribosomal RNA genes. ... 18S-5.6S-25S and 5S ribosomal DNA (rDNA) sites were located by in situ hybridization to the three main species of the Saccharum ...
https://insights.ovid.com/geno/199804000/01041750-199804000-00012
*  Site of transcription of ribosomal RNA and intranucleolar structure in HeLa cells | Journal of Cell Science
Sites of transcription of ribosomal RNA in HeLa cells were visualized by electron microscopy. Cells were either incubated with ... Site of transcription of ribosomal RNA and intranucleolar structure in HeLa cells ... Site of transcription of ribosomal RNA and intranucleolar structure in HeLa cells ... Site of transcription of ribosomal RNA and intranucleolar structure in HeLa cells ...
http://jcs.biologists.org/content/107/2/639
*  Species-specific repeat units in the intergenic spacer of the ribosomal RNA cistron of Anopheles aquasalis Curry. | The...
Both A. aquasalis-specific clones were from the intergenic spacer region of the ribosomal RNA (rRNA) cistron. Upon digestion ... f Species-specific repeat units in the intergenic spacer of the ribosomal RNA cistron of Anopheles aquasalis Curry. * O P ... Both A. aquasalis-specific clones were from the intergenic spacer region of the ribosomal RNA (rRNA) cistron. Upon digestion ...
http://www.ajtmh.org/content/journals/10.4269/ajtmh.1998.59.673
*  16S ribosomal RNA gene sequence and phylogeny of toxic Microcystis sp. (cyanobacteria). - Semantic Scholar
16S ribosomal RNA gene sequence and phylogeny of toxic Microcystis sp. (cyanobacteria).. @article{Neilan199416SRR, title={16S ... ribosomal RNA gene sequence and phylogeny of toxic Microcystis sp. (cyanobacteria).}, author={Brett A Neilan and Philip T. Cox ...
https://www.semanticscholar.org/paper/16S-ribosomal-RNA-gene-sequence-and-phylogeny-of-Neilan-Cox/12453f61e38aa9d6e6efab8b1026d69b3a2fcebb
*  CiNii 論文 - Evolutionary relationships among Japanese pond frogs inferred from mitochondrial...
Phylogenetic relationships of amphibian families inferred from DNA sequences of mitochondrial 12S and 16S ribosomal RNA genes. ... Tandem duplication of D-loop and ribosomal RNA sequences in lizard mitochondrial DNA MORITZ C. ... relationships among Japanese pond frogs inferred from mitochondrial DNA sequences of cytochrome b and 12S ribosomal RNA genes * ...
http://ci.nii.ac.jp/naid/10003762333
*  Activation of Ribosomal RNA Transcription by Hepatitis C Virus Involves Upstream Binding Factor Phosphorylation via Induction...
The ribosomal reporter RNA used for Northern is tagged at the 3′ end by T7B to discriminate between the endogenous rRNA and the ... Total RNA was isolated from each plate after 36 h and 4 μg of RNA were subjected to RNase protection assay (RPA) using [α-32P]- ... Activation of Ribosomal RNA Transcription by Hepatitis C Virus Involves Upstream Binding Factor Phosphorylation via Induction ... Sollner-Webb B, Tower J. Transcription of cloned eukaryotic ribosomal RNA genes. Annu Rev Biochem 1986; 55: 801-30. ...
http://cancerres.aacrjournals.org/content/69/5/2057
*  Graduate Thesis Or Dissertation | An analysis of Sargasso Sea bacterioplankton diversity using 16S ribosomal RNA | ID:...
The objective of this project was to use ribosomal RNA genes, cloned from natural populations of Sargasso Sea bacterioplankton ... An analysis of Sargasso Sea bacterioplankton diversity using 16S ribosomal RNA Public Deposited ... The method described here for analyzing natural bacterial communities circumvents this problem by utilizing ribosomal RNA, ...
https://ir.library.oregonstate.edu/concern/graduate_thesis_or_dissertations/j098zd11d
*  Phylogeny of plastids A review based on comparisons of small subunit ribosomal RNA coding regions - ePIC
Bhattacharya, D. and Medlin, L. (1995): Phylogeny of plastids A review based on comparisons of small subunit ribosomal RNA ... Phylogeny of plastids A review based on comparisons of small subunit ribosomal RNA coding regions ...
https://epic.awi.de/id/eprint/291/
*  ROLE OF PROTEIN AND RNA ON RIBOSOMAL PEPTIDYL TRANSFERASE | Biochemical Society Transactions
ROLE OF PROTEIN AND RNA ON RIBOSOMAL PEPTIDYL TRANSFERASE. F. Juan, C. Bernabeu, R. Amils, J. P. G. Ballesta ... ROLE OF PROTEIN AND RNA ON RIBOSOMAL PEPTIDYL TRANSFERASE Message Subject (Your Name) has forwarded a page to you from ...
http://www.biochemsoctrans.org/content/9/2/299P.2
*  Rn28s1 28S ribosomal RNA [ Mus musculus] annotation in GTF file
Could high duplication be from ribosomal RNA in RNA-seq samples? Hello, I have some paired-end RNA-seq data. My samples were ... What is the expected composition of RNA in the RNA-Seq? What is the expected composition of RNA in the results of RNA-Seq? The ... and I found the gene name for the 18S ribosomal RNA (Rn18s), but I couldn't find the 28S ribosomal RNA (Rn28s). Does anyone ... PCT_ribosomal base and PCT_intergenic base in standard RNA-Seq I have been using STAR for RNA-Seq alignment. For alignment QC ...
https://www.biostars.org/p/272082/