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*  Frontiers | Function of Plant DExD/H-Box RNA Helicases Associated with Ribosomal RNA Biogenesis | Plant Science
DExD/H-box RHs are found in most organisms and play critical roles in a variety of RNA-involved cellular events. In human and ... DExD/H-box RHs are found in most organisms and play critical roles in a variety of RNA-involved cellular events. In human and ... RHs are a family of ATPases that rearrange the secondary structures of RNA and thus remodel ribonucleoprotein (RNP) complexes. ... RHs are a family of ATPases that rearrange the secondary structures of RNA and thus remodel ribonucleoprotein (RNP) complexes. ...
https://www.frontiersin.org/articles/10.3389/fpls.2018.00125/full
*  The regulation of RNA polymerase III transcription by protein kinase CK2 - Enlighten: Theses
... untranslated RNA molecules such as transfer (tRNA) and 5S ribosomal RNA (5S rRNA). Indeed, recent evidence suggests that ... RNA polymerase (pol) III plays a key role in protein synthesis by catalysing the production of small, ... Mitchell, Louise E (2008) The regulation of RNA polymerase III transcription by protein kinase CK2. PhD thesis, University of ...
http://theses.gla.ac.uk/399/
*  High or low dietary carbohydrate:protein ratios during first-feeding affect glucose metabolism and intestinal microbiota in...
18S ribosomal RNA. DGGE. denaturing gradient gel electrophoresis. EF1α. elongation factor-1, isoform alpha. FBPase. fructose1,6 ... An amount of 1 μg of total RNA was used for cDNA synthesis. The NCode™ VILO™ miRNA cDNA Synthesis Kit (Invitrogen) or the ... Relative gene expression of mRNA and miRNA was determined by quantitative real-time RT-PCR on RNAs extracted from whole body ( ... Gene expression analyses were performed on total RNA extracted from whole larval body, sampled 3 h after the last meal. Data ...
http://jeb.biologists.org/content/217/19/3396
*  JunB contributes to Id2 repression and the epithelial-mesenchymal transition in response to transforming growth factor-β.
18S ribosomal RNA (rRNA). The normalized mRNA level was defined as ΔCT = CT (test gene) − CT (mean for the reference gene). The ... Total RNA was extracted using a PerfectPure RNA Cultured Cell kit (5 PRIME, Inc.). Primer sequences are listed in Tables S1 ( ... A scramble control RNA duplex labeled with Rhodamine was obtained from QIAGEN. Cells were transfected with RNA duplexes (200 nM ... JunB contributes to the induction of profibrotic proteins by TGF-β. (A) RT-PCR analysis of total RNA from NMuMG cells ...
http://www.biomedsearch.com/nih/JunB-contributes-to-Id2-repression/22391036.html
*  Absence of MHC class II on cDCs results in microbial-dependent intestinal inflammation | JEM
... we performed 16S ribosomal RNA (rRNA) fluorescence in situ hybridization (16S FISH). We found that, in zDCΔMHCII mice, ... RNA isolation and qPCR. Epithelial cells were resuspended in TRIzol (Invitrogen), RNA was isolated according to the ... Supernatant containing intraepithelial lymphocytes was decanted and spun down (for RNA isolation from epithelial cells, see ...
http://jem.rupress.org/content/early/2016/03/21/jem.20160062
*  Plus it
ribosomal RNA. sgRNA. single-guide RNA. PAM. protospacer-associated motif. RE/PCR. restriction enzyme digestion/PCR ... The presence of 25S and 18S ribosomal RNAs (rRNAs) in the TRAP fraction from 35Spro-HF-GFP-RPL18 roots and their absence in the ... 5F). Ribosomal protein S6 (RPS6), a core component of the small ribosomal subunit, was similarly detected in polysome fractions ... the Cas9 endonuclease and a synthetic RNA chimera (single-guide RNA [sgRNA]; Jinek et al., 2012). The sgRNA contains a guide ...
http://www.plantphysiol.org/content/166/2/455
*  PCR Protocols & Applications - QIAGEN
Random oligomers will enable reverse transcription from the entire RNA population, including ribosomal RNA, transfer RNA, and ... Effect of RNA secondary structure. RNA secondary structure can affect RT-PCR in several ways. Regions of RNA with complex ... The expression level of the reference RNA should also be approximately the same as the RNA under study. Reference RNA commonly ... 10 ng of RNA corresponds to about 500 cells, and even low-copy transcripts are well represented in this amount of RNA. Using ...
https://www.qiagen.com/hr/resources/molecular-biology-methods/pcr/
*  Free Biology Flashcards about A &P 1
rRNA (Ribosomal RNA). Joins with ribosomal proteins to make ribosomes. mRNA (Messenger RNA). Directs the synthesis of a protein ... tRNA (Transfer RNA). Binds to an amino acid and holds it in place on a ribosome until it is incorporated into a protein during ... Made up of DNA, RNA, and proteins. Werner Syndrome. A rare, inherited disease that causes a rapid acceleration of aging, ...
https://www.studystack.com/flashcard-278355
*  Deep learning models for bacteria taxonomic classification of metagenomic data | Springer for Research & Development
Of course, several studies demonstrated the 16S ribosomal RNA... ... Of course, several studies demonstrated the 16S ribosomal RNA ... Chakravorty S, Helb D, Burday M, Connell N, Alland D. A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis ... Among them, for the consideration stated above, emerge the ones based on the identification of 16S small subunit ribosomal RNA ... able to identify bacterial species in metagenomic data by the identification of 16S small subunit ribosomal RNA (rRNA) genes. ...
https://rd.springer.com/article/10.1186%2Fs12859-018-2182-6
*  Multiple environmental stressors induce complex transcriptomic responses indicative of phenotypic outcomes in Western fence...
... were validated using RT-qPCR of 41 transcripts of importance across the three exposures in addition to the 18S ribosomal RNA ( ... RNA extraction was conducted using RNeasy Mini RNA extraction kits (Qiagen Inc., Valencia, CA). RNA quality was assessed using ... The RNA compilation used to construct the WFL cDNA library included 500 ng of total RNA from 46 total samples. The SMART™ PCR ... The RNA pool used to construct the cDNA library included RNA extracted from brain, bone marrow, gut, heart, liver, and testes. ...
https://rd.springer.com/article/10.1186%2Fs12864-018-5270-0
*  A Positive Feedback Loop between HEAT SHOCK PROTEIN101 and HEAT STRESS-ASSOCIATED 32-KD PROTEIN Modulates Long-Term Acquired...
RNA interference. KO. knockout. RT. reverse transcription. MS. Murashige and Skoog. rRNA. ribosomal RNA. ... The expression level of the target genes was normalized to that of 18S ribosomal RNA (rRNA) by subtracting the cycle threshold ... RNA Isolation and RT-PCR Analysis. Total RNA was isolated from 4-d-old seedlings as previously described (Charng et al., 2006 ... In this study, we used rice retrotransposon Tos17 insertion lines of HSA32 and RNA interference (RNAi) lines of HSP101 to test ...
http://www.plantphysiol.org/content/164/4/2045.full
*  RNA: Facts, Discussion Forum, and Encyclopedia Article
These products are often proteins, but in non-protein coding genes such as ribosomal RNA , transfer RNA or small nuclear RNA ... Like DNA, RNA can carry genetic information. RNA virus. RNA virus. An RNA virus is a virus that has RNA as its genetic material ... RNA is made within living cells by RNA polymerase. RNA polymerase. RNA polymerase is an enzyme that produces RNA. In cells, ... RNA-dependent RNA polymerase , , or RNA replicase, is an enzyme that catalyzes the replication of RNA from an RNA template... ...
http://www.absoluteastronomy.com/topics/RNA
*  On emerging nuclear order | JCB
They are the sites of ribosomal RNA (rRNA) transcription by RNA polymerase I, posttranscriptional processing of the rRNA, and ... For example, RNA polymerase I localizes to nucleoli for ribosome synthesis, whereas RNA polymerase II and III localize to ... Fluorescent labeling of nascent RNA reveals transcription by RNA polymerase II in domains scattered throughout the nucleus. J. ... Active RNA polymerases: mobile or immobile molecular machines? PLoS Biol. 8:e1000419. doi:10.1371/journal.pbio.1000419. ...
http://jcb.rupress.org/content/192/5/711
*  Category:Ribbon diagrams - Wikimedia Commons
5S ribosomal RNA ribbons.jpg 820 × 768; 169 KB. *. 7-dehydroxycarbohydrate reductase.png 640 × 480; 102 KB. ...
https://commons.wikimedia.org/wiki/Category:Ribbon_diagrams
*  Patent US6441152 - Methods, kits and compositions for the identification of nucleic acids ... - Google Patents
Detection of Ribosomal RNA using PNA probes. US5985930 *. Apr 1, 1997. Nov 16, 1999. Pasinetti; Giulio M.. Treatment of ... Peptide Nucleic Acid (PNA) is a non-naturally occurring polyamide which can hybridize to nucleic acid (DNA and RNA) with ... Pluskal, M. et al, Peptide nucleic acid probes and their application in DNA and RNA blot hybridization analysis. Abstract #35, ... 5,601,984, entitled "Method for detecting the presence of amount of a taxonomic group of organisms using specific r-RNA ...
http://www.google.com/patents/US6441152?dq=5,815,488
*  Search | eLife
PTRF/Cavin-1 promotes efficient ribosomal RNA transcription in response to metabolic challenges Libin Liu, Paul F Pilch ... CELF RNA binding proteins promote axon regeneration in C. elegans and mammals through alternative splicing of Syntaxins Lizhen ... PTRF (Cavin-1) mediates metabolism-regulated ribosomal transcription in mature adipocytes, independent of its role in caveolae ...
https://elifesciences.org/search?for=LibGen
*  Activation of Signal Transducer and Activator of Transcription 3 Protects Cardiomyocytes from Hypoxia/Reoxygenation-Induced...
18S indicates 18S ribosomal RNA. The results are representative of 3 similar experiments. B, Cardiomyocytes were stimulated ...
http://circ.ahajournals.org/content/104/9/979
*  RRP6 | SGD
Ribosomal RNA Processing 1 Comparative Info. Integrated model organism details available at the Alliance of Genome Resources ... posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery (IMP) ... Nuclear exosome exonuclease component; has 3'-5' exonuclease activity that is regulated by Lrp1p; involved in RNA processing, ... nuclear polyadenylation-dependent RNA catabolism, and 3-end processing of U1, U4, and U5 snRNA; plays a role in exonucleolytic ...
https://www.yeastgenome.org/locus/YOR001W
*  RRP45 | SGD
Ribosomal RNA Processing 5 Comparative Info. Integrated model organism details available at the Alliance of Genome Resources ... involved in exonucleolytic trimming of tricistronic pre-ribosomal RNA (SSU-rRNA, 5.8S rRNA, LSU-rRNA) to generate mature 3'- ... Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; ... ends of 5.8S transcripts; contributes to 3'-end processing of U1,U4,U5 small nuclear RNA (snRNA). View computational ...
https://www.yeastgenome.org/locus/RRP45
*  Geoscience Research Institute | Organization and the Origin of Life
Ribosomal-RNA, 16S unit. 10903 3,000. Ribosomal-RNA, 23S unit. 101806 ... The Ni (i=1,2,3, ..., n) represent complementary single strands of RNA whose information is made available by the translation ... The Pi catalyse the replication of the next RNA strand, Ni+i, in the cycle.. ...
https://www.grisda.org/origins-04016
*  CSIRO PUBLISHING | Reproduction, Fertility and Development
RDv17n2Ab212 212 HETEROGENEITY OF RIBOSOMAL RNA GENE ACTIVATION AMONG CELLS OF IN VITRO-PRODUCED PORCINE EMBRYOS. B. ... RD04109 Messenger RNA expression patterns in bovine embryos derived from in vitro procedures and their implications for ... RDv17n2Ab218 218 SELECTIVE REDUCTION OF p66shc mRNA IN BOVINE OOCYTES/EMBRYOS BY RNA INTERFERENCE. L.A. Favetta, G.F. ...
http://www.publish.csiro.au/RD/issue/896
*  SCOPe 2.06: Structural Classification of Proteins - extended
Compound: 16S ribosomal RNA. Species: Thermus thermophilus [TaxId:274]. *Chain 'B':. Compound: 30S ribosomal protein S2. ... Compound: 30S ribosomal protein S3. Species: Thermus thermophilus [TaxId:274]. Database cross-references and differences (RAF- ... Compound: 30S ribosomal protein S4. Species: Thermus thermophilus [TaxId:274]. Database cross-references and differences (RAF- ... Compound: 30S ribosomal protein S5. Species: Thermus thermophilus [TaxId:274]. Database cross-references and differences (RAF- ...
http://scop.berkeley.edu/pdb/code=2e5l&ver=2.06
*  Encyclopedia of Cell Biology - Elsevier Science & Technology - Literati by Credo
Ribosomal RNAs and Protein Synthesis. *Comparison of Bacterial and Eukaryotic Replisome Components ... DNA, RNA Chemical Properties (Including Sequencing and Next-Generation Sequencing). *The Chemical Synthesis of DNA and RNA ...
https://corp.credoreference.com/component/booktracker/edition/11015.html
*  The human RNA-binding protein RBFA promotes the maturation of the mitochondrial ribosome | Biochemical Journal
... end of 16 S ribosomal RNA of Escherichia coli. IV. The effect of the methylgroups on ribosomal subunit interaction. Nucleic ... was mediated by the ribosomal RNA and, if so, to assess the precise RNA-binding spectrum of RBFA under physiological conditions ... ribosomal RNA; SSU, small ribosomal subunit; SDHA, succinate dehydrogenase subunit A; TFB1M, mitochondrial transcription factor ... 2003) Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop. Nat. Genet. 33, 23-24 doi: ...
http://www.biochemj.org/content/474/13/2145
*  ABBREVIATIONS AND CONVENTIONS | Molecular and Cellular Biology
rRNA (ribosomal RNA). *mRNA (messenger RNA). *tRNA (transfer RNA). *AMP, ADP, ATP, dAMP, ddATP, and GTP, etc. (for the ...
https://mcb.asm.org/content/abbreviations-and-conventions