Yeh, CH, Hung, LY, Hsu, C, Le, SY, Lee, PT, Liao, WL, Lin, YT, Chang, WC & Tseng, JT 2008, RNA-binding protein HuR interacts ... T1 - RNA-binding protein HuR interacts with thrombomodulin 5′untranslated region and represses internal ribosome entry site- ... RNA-binding protein HuR interacts with thrombomodulin 5′untranslated region and represses internal ribosome entry site-mediated ... RNA-binding protein HuR interacts with thrombomodulin 5′untranslated region and represses internal ribosome entry site-mediated ...
Z. J. Lorković and A. Barta, "Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from ... N. V. Fedoroff, "RNA-binding proteins in plants: the tip of an iceberg?" Current Opinion in Plant Biology, vol. 5, no. 5, pp. ... RNA-Binding Proteins in Plant Immunity. Virginia Woloshen,1,2 Shuai Huang,1,2 and Xin Li1,2 ... Z. Q. Fu, M. Guo, B. R. Jeong et al., "A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity," ...
... stability and translation of coding and non-coding RNAs. RNA-binding proteins (RBPs) and ribonucleoproteins coordinate RNA ... A census of human RNA-binding proteins.. Gerstberger S1, Hafner M2, Tuschl T1. ... Our analysis is a critical step towards the comprehensive characterization of proteins involved in human RNA metabolism. ... Howard Hughes Medical Institute and Laboratory for RNA Molecular Biology, The Rockefeller University, 1230 York Ave, New York ...
Addition of several general RNA binding proteins, such as hnRNP A1, La autoantigen, pyrimidine tract binding protein (hnRNP I/ ... General RNA binding proteins render translation cap dependent.. Svitkin YV1, Ovchinnikov LP, Dreyfuss G, Sonenberg N. ... we suggest that one function of general mRNA binding proteins in the cytoplasm is to promote ribosome binding by a 5 end, cap- ... we show that a critical parameter which contributes to cap-dependent translation is the amount of general RNA binding proteins ...
... the RNA-binding protein training dataset of 2752 proteins and the RNA-binding protein testing dataset of 1374 proteins (see ... iv) The RNA-Binding Protein Dataset:. protein sequences with length ,6000 aa or ,50 aa were removed since they might be protein ... means RNA-binding protein and "B" means RNA-nonbinding protein) are available in Supplementary Material (see Supplementary ... Prediction of RNA-Binding Proteins by Voting Systems. C. R. Peng,1,2 L. Liu,1 B. Niu,3 Y. L. Lv,4 M. J. Li,2 Y. L. Yuan,5 Y. B ...
We combine protein signatures from a number of member databases into a single searchable resource, capitalising on their ... InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites ... GO:0003676 nucleic acid binding GO:0003723 RNA binding GO:0003729 mRNA binding ...
The Pumilio protein binds RNA through a conserved domain that defines a new class of RNA-binding proteins. RNA 3:1421-1433. ... This review focuses on RNA-binding proteins and their role in regulating local protein synthesis in neurons. ... Such a mechanism was recently attributed to the mRNA-binding protein zipcode binding protein 1 (ZBP1) (Huttelmaier et al., 2005 ... RNA-Binding Proteins: A Lesson in Repression. David G. Wells. Journal of Neuroscience 5 July 2006, 26 (27) 7135-7138; DOI: ...
... we outline the basic steps of miRNA biogenesis and miRNA mediated gene regulation focusing on the role of RNA binding proteins ... RNA binding protein; Drosha; Dicer; Argonaute; cross-linking and immonoprecipitation (CLIP) miRNA; RNA binding protein; Drosha ... Connerty, P.; Ahadi, A.; Hutvagner, G. RNA Binding Proteins in the miRNA Pathway. Int. J. Mol. Sci. 2016, 17, 31. ... "RNA Binding Proteins in the miRNA Pathway." Int. J. Mol. Sci. 17, no. 1: 31. ...
... 18.10.2016. Small regulatory RNA molecules are vital for salmonella and other ... This protein and the RNA molecules that bind to it represent a largely unresearched class of gene activity regulators in the ... The structures of the different regulatory RNA molecules are shown left, their preferred protein binding partners on the right ... Experiments showed that the ProQ protein binds to 98 regulatory RNAs of the enterobacterial Salmonella enterica. The bacterium ...
In this review we focus on the effect of alcohol on different RNA-binding proteins and their possible contribution to alcohol- ... Given their diverse functions, cells express a variety of RNA-binding proteins, which play important roles in the pathologies ... We further discuss the conventional methods and newer techniques that are employed to identify RNA-binding proteins. ... related disorders, and discuss the role of these proteins in the development of neurological diseases and cancer. ...
Twentyeight-Seven is building a small molecule platform to target interactions between non-coding RNAs and an emerging target ... Twentyeight-Sevens bet on RNA-binding proteins. Twentyeight-Seven is capitalizing on the emerging biology of RNA-binding ... RNA-binding proteins.. Launched last September, the company is using an $82.8 million series A round backed by a syndicate that ... class in gene regulation: RNA-binding proteins. ... proteins by targeting their interactions with non-coding RNAs. ...
The PDB archive contains information about experimentally-determined structures of proteins, nucleic acids, and complex ... White boxes represent UTRs (untranslated regions). Orange: protein coding regions. The black lines connecting boxes represent ...
Several in vitro studies have demonstrated that the Hu proteins bind to RNA. HuB was found to bind to AU-rich RNA sequences in ... complexity of the Hu RNA binding proteins. Our work illustrates several levels of complexity in the family of Hu RNA binding ... 1993b) The protein product of the fragile X gene, FMR-1, has characteristics of an RNA-binding protein. Cell 74:291-298. ... 1993) The Drosophila gene rbp9 encodes a protein that is a member of a conserved group of putative RNA binding proteins that ...
We combine protein signatures from a number of member databases into a single searchable resource, capitalising on their ... InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites ... RNA-binding motif protein, Y chromosome, family 1 member B (A6NDE4) Accession ...
"RNA-Binding Proteins" by people in Harvard Catalyst Profiles by year, and whether "RNA-Binding Proteins" was a major or minor ... Proteins that bind to RNA molecules. Included here are RIBONUCLEOPROTEINS and other proteins whose function is to bind ... "RNA-Binding Proteins" is a descriptor in the National Library of Medicines controlled vocabulary thesaurus, MeSH (Medical ... Double-Stranded RNA-Binding Proteins*Double-Stranded RNA-Binding Proteins. *Double Stranded RNA Binding Proteins ...
Term: RNA-binding motif, single-stranded-interacting protein. ID: PIRSF037997 Mouse Protein Superfamily Annotations. Select one ... MGI protein superfamily detail pages represent the protein classification set for a homeomorphic superfamily from the Protein ... The number of protein sequences returned does not always match the numbers of homologs shown, because the same protein sequence ... You can also "Select all" mouse superfamily members to obtain their protein sequences and the protein sequences for all mouse, ...
Characterization of these proteins has led to the identification of several RNA-binding motifs, and recent experiments have ... Conserved structures and diversity of functions of RNA-binding proteins Message Subject. (Your Name) has forwarded a page to ... In eukaryotic cells, a multitude of RNA-binding proteins play key roles in the posttranscriptional regulation of gene ... The major RNA-binding motifs are described and examples of how they may function are given. ...
This complex consists of two mitochondrial RNA-binding proteins MRP1 and MRP2. These act together to bind to RNA (ribonucleic ... These two proteins are from the protozoan Trypanosoma brucei. - Stock Image C015/4586 ... Caption: Mitochondrial RNA-binding proteins, molecular model. This complex consists of two mitochondrial RNA-binding proteins ... protein, proteins, proteomics, protozoan, ribonucleic acid, rna, rna-binding protein, structural, trypanosoma brucei, white ...
The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1. Zhicheng Dong, Meng-Hsuan Han, ... 2004) Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. RNA 10:185-191. ... The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1 ... The RNA-binding proteins HYL1 and SE promote accurate in vitro processing of pri-miRNA by DCL1 ...
... the QKI-6 and QKI-7 RNA binding proteins are positive regulators of PNS myelination and show that the QKI RNA binding proteins ... or RNA binding proteins in PNS myelination. Methodology/Principal Findings To define the role of the QKI proteins in PNS ... In addition, these events were coordinated with elevated proteins levels of p27KIP1 and myelin basic protein (MBP), markers of ... little is known about the role of the QKI proteins, ...
1999) Degradation of FinP antisense RNA from F-like plasmids: The RNA-binding protein, FinO, protects FinP from ribonuclease E ... A more functionally relevant criterion is the association of RNAs with cognate RNA-binding proteins. Here, we describe the ... One such criterion is the association of RNAs with functionally important cognate RNA-binding proteins. Here we analyze the ... Grad-seq promises to define functional RNA classes and major RNA-binding proteins in both model species and genetically ...
Supplementary information, datasets and open-source code from manuscript on Musashi RNA-binding proteins in stem cells and in ... Musashi proteins are post-transcriptional regulators of the epithelial-luminal cell state. (2014). bioRxiv, dx.doi.org/10.1101/ ...
Binds directly to the 3-UTR of the PER1 mRNA (By similarity). ... RNA-binding protein 4B. Alternative name(s):. RNA-binding motif ... sp,Q9BQ04,RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1 ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. Q9BQ04. G7NC45. G3R7Q9. G7PP84. H2NCQ1. H2Q476. ... RNA binding Source: UniProtKB ,p>Inferred from Direct Assay,/p> ,p>Used to indicate a direct assay for the function, process or ...
May bind to specific miRNA hairpins (By similarity). ... Binds to RNA homopolymers, with a preference for poly(G) and ... RNA-binding motif protein 10. RNA-binding protein S1-11 Publication. ,p>Manually curated information that is based on ... RNA-binding protein 10Add BLAST. 852. Amino acid modifications. Feature key. Position(s). DescriptionActions. Graphical view. ... "Molecular cloning of a RNA binding protein, S1-1.". Inoue A., Takahashi K., Kimura M., Watanabe T., Morisawa S.. Nucleic Acids ...
... it makes a speckled pattern consistent with the large protein/RNA complexes formed by RNA-binding proteins. Bowser suspects it ... RNA-binding Protein Inhabits Granules in ALS, FTD. Go to another part. Series - 10th Brain Research Conference: RNA Metabolism ... Li thinks RBM45 must bind RNAs as an oligomer. The researchers are now trying to identify the RNAs that bind both RBM43 and TDP ... Role of Stress Granules and RNA-Binding Proteins in Neurodegeneration: A Mini-Review. Gerontology. 2013;59(6):524-33. PubMed. ...