A HAPLOTYPE-BASED METHOD FOR QTL MAPPING OF F1 POPULATIONS IN OUTBRED PLANT SPECIES. (Peer Reviewed Journal) (28-Jan-04) ...
... integrated haplotype score (iHS) and cross population extended haplotype homozygosity (XP-EHH). One of… ... Applying CMS to candidate regions from the International Haplotype Map, we localized population-specific… ... Genetic Futures summary of Signals of recent positive selection in a worldwide sample of human populations is an excellent ... To what extent are phenotypic differences among human populations driven by natural selection? With the recent arrival of large ...
Finally, populations showed an excess of rare haplotypes. The mismatch distribution and several population genetic statistics ... For Rades and Bizerte populations a constant population size was detected. These findings are important for fisheries ... A total of 20 specimens from four sampling sites were analysed and revealed 12 different haplotypes. Haplotype diversity showed ... Population substructure of Sepia officinalis sampled along the Tunisian coastline was studied. We have scored the genetic ...
Cytochrome P450 2E1 gene polymorphisms/haplotypes and Parkinsons disease in a Swedish population. ... population. Anna Håkansson, Jonas Melke, Lars Westberg, Haydeh Niazi Shahabi, Silva Buervenich, Andrea Carmine, Kjell Klingborg ... Kinesin Light Chain 1 Gene Haplotypes in Three Conformational Diseases. Malin von Otter, Sara Landgren, Staffan Nilsson, ... Association of Nrf2-encoding NFE2L2 haplotypes with Parkinsons disease. Malin von Otter, Sara Landgren, Staffan Nilsson, ...
Hybridization between European and African-derived honeybee populations (Apis mellifera) at different altitudes in Perú ... Key words: Apis mellifera / Africanized honey bee / Baja California / hybridization / haplotype / morphometrics © INRA, DIB- ... Frequency of European and African-derived morphotypes and haplotypes in colonies of honey bees (Apis mellifera) from NW Mexico ... Morphometrics and haplotype analyses were used to investigate the frequency of African markers in honey bees from Sonora (SON ...
... they can be used to distinguish individuals and populations. What good is haplotyping? One can determine what specific diseases ... Grouping individuals that share a particular haplotype is called haplotyping. Because these particular sequences of SNPs on a ... Researchers identified a haplotype on chromosome 5 that correlates with the disease. This region of the chromosome contains ... In most cases, there are much fewer haplotypes than SNPs. Although it is the SNPs that actually cause disease, looking for ...
We found strong evidence of survival of northwestern Atlantic populations in local Pleistocene glacial refugia: most haplotypes ... Segregation was highest and gene flow was lowest (mean m = 0.007) between inflow populations and a third population breeding in ... KEYWORDS: Antibiotic resistance, evolutionary epidemiology, microbial population genetics, niche construction, population ... suggesting that this population has encountered a historical bottleneck. For all P. mariae populations, Θ and Ne based on ...
Chloroplast DNA haplotype variation and population differentiation in Sorbus aucuparia L. (Rosaceae: Maloideae).. In: Molecular ... Impacts de la restauration et de la gestion de bas-marais pour la conservation de populations de pollinisateurs. In: Parcs et ... Effects of population size on pollinator guild, reproductive success and long term persistence of Comarum palustre (Rosaceae). ... Population size affects genetic diversity and fine-scale spatial genetic structure in the clonal distylous herb Menyanthes ...
Haplotype Sharing Provides Insights into Fine-Scale Population History and Disease in Finland. Martin AR, Karczewski KJ, ... Haplotype Sharing Provides Insights into Fine-Scale Population History and Disease in Finland. Martin AR, Karczewski KJ, ... We coupled this information with birth records to infer recent historical population dynamics, including population size ... Finland is a great place to infer population history and query disease genetics because it has a well-characterized history as ...
Explore the mathematical modeling of adaptive forces and SNP frequencies in populations. Uncover new insights into the biology ... The population stability condition can be expressed in terms of the population averaged haplotype and allelic potentials. We ... Population ) = 0 ⇒ ∑ H 〈 μ ( H ) 〉 + ∑ S 〈 μ ( S ) 〉 = 0 . (9). This condition demonstrates that balance is established between ... is just the entropy per population member S ( H ) = N population s ( H ) . This normalized measure of information ranges ...
Tests for variants near the HLA-DQA1 and HLA-DQB1 genes linked to the HLA-DQ2.5 and HLA-DQ8 haplotypes. These haplotypes are ... Genetic testing for BRCA1 and BRCA2 variants in the general population is not currently recommended by any healthcare ... Tests for the S342G and N388_Y389del variants in the APOL1 gene, which are used to define the G1 and G2 haplotypes, ... Genetic testing for G6PD deficiency in adults in the general population is not currently recommended by any healthcare ...
... haplotypes and sCD14 are important mediators of lung function among those with COPD in this occupationally-exposed population. ... The final model included the variables sCD14 and haplotypes and a haplotype x sCD14 interaction term. Individuals with the GTTG ... Interaction of CD14 haplotypes and soluble CD14 on pulmonary function in agricultural workers. ... No association was found between CD14 polymorphisms/haplotypes (CD14/-2838; CD14/-1720; CD14/-651; CD14/-260) and sCD14 levels ...
... summary Studies of canine breed formation and ancestry are hypothesized to reflect history and migration of human populations. ... Population genetics Is the Subject Area "Population genetics" applicable to this article? Yes. No. ... Haplotypes Is the Subject Area "Haplotypes" applicable to this article? Yes. No. ...
If a population has a similar set of haplotypes, they are grouped in a haplogroup. This is how population genetics helps trace ... For your own updated results, your DNA profile is found in an Omani population and Armenian population from Sason at similar ... For example, results with native populations and all populations are totally different.. i think 23andme probably is the one ... DNAtribes, they are producing results based on their population data. The more populations added the less credible the result. ...
... were related to genetic variation in the CYP2B6 gene in a population sample. METHODS: In the population-based Prospective ... The investigated SNPs came primarily from two haplotypes, although the correlation between the haplotypes was rather high. ... In the population-based Prospective Investigation of the Vasculature in Uppsala Seniors (PIVUS) study (all aged 70), global DNA ... In the population-based Prospective Investigation of the Vasculature in Uppsala Seniors (PIVUS) study, lipids were measured at ...
... the Uyghur and Kazakh ethnic minorities of Urumqi city populations in China. Genotyping of 16 KIR genes was tested in 479 ... The study showed that profile of KIR genotypes in three ethnic minority populations in China displayed ethnic diversity. It ... show extensive variation in genetic content and allelic polymorphi sms among different populations. We analyzed the ... Table 2 Comparison of genotypes, haplotypes and linkage groups in Tibetan, Kazakh and Uyghur populations. Full size table. ...
Technology of next generation sequencing and candidate gene markers will be used to genotype these wild populations. Population ... Both single marker models and haplotype-based tests will be applied for all SNP-trait combinations. Marker data will be ... comprising different wild cacao populations will be selected. The criteria to assemble this working collection will be based on ... such as yield components and diseases resistance in the untapped wild populations and, analyze the susceptible and resistance ...
Y-linked haplotypes in Amerindian chromosomes from Mexican populations: genetic evidence to the dual origin of the Huichol ... Release 20 is out with 46,720 haplotypes in 386 populations. 44,863 haplotypes of these are completely typed for 9 and 17,824 ... The Y-haplotypes shared between populations suggest that, among the Amerindian tribes studied herein, the paternal genetic pool ... Y-chromosome Genotyping and Genetic Structure of Zhuang Populations.. Jing C, Hui L, Zhen-Dong Q, Wen-Hong L, Wei-Xiong L, Rui- ...
3. Algeria hosts populations with approximately 70+ mtdna H1 haplotypes. There was probably at one time R1b in large numbers, ... but the source population who contributed to a small percentage of admixture in all those populations. These genes seem to have ... Absorbs K, T2b and X2 lineages from G2a3b1, J2b2 and T1 populations from the Balkans and Carpathians.. Middle to Late Bronze ... Looking for green fields, the R1b population split into Europe and the other (V88) deeper into Africa. I would go so far to say ...
WT = Wild Type, the ancestral allelic variant found in most populations. G1 and G2 are two haplotypes, associated alleles ... E-1 is present in 89% of haplotypes carrying G1 and in 76% of haplotypes carrying G2. A classic illustration of likely ... rs5750250 of S-haplotype and rs11912763 of F-haplotype) were designated as most strongly predictive on the basis of Receiver ... The G2 haplotype is the largest effect independent variable after G1 is taken into account; in other words, it explains most of ...
Regions with significant populations Tibet Autonomous Region, parts of Qinghai, Sichuan and Gansu provinces. (governed by China ... "Y chromosome haplotypes reveal prehistorical migrations to the Himalayas," Human Genetics 107 (2000): 582-590. Retrieved ... Prior to the Chinese annexation of Tibet in 1959, it was estimated that about one-quarter of the population belonged to the ... Both groups, also found in the Indian state of Arunachal Pradesh, collectively form a population of around 10,500. The term " ...
Linked-read sequencing enables haplotype-resolved resequencing at population scale. Molecular Ecology Resources, in press ... Nadachowska-Brzyska K, BURRI RETO, Smeds L, Ellegren H (2016) PSMC-analysis of effective population sizes in molecular ecology ... Lack of statistical power as a major limitation in understanding MHC-mediated immunocompetence in wild vertebrate populations. ... How does replication help in understanding the genetic basis of phenotypic variation in outbred populations? Molecular Ecology ...
Ten haplotypes were traced in Jakun populations and 9 detected in Temuan. However, there were only two haplotypes detected in ... which are haplotype 3, haplotype 9 and haplotype 14. C-T transition at the sites 16268 and 16318 were detected for haplotype 3 ... 16285 and 160 were detected in haplotype 14 but not in haplotype 3 and haplotype 9. Therefore, haplotype 14 was grouped in a ... Here, we detected 9 haplotypes with seven ethnic-specific haplotypes from Temuan populations, which support Hill et al. (2006) ...
Haplotypes with copy number and single nucleotide polymorphisms in CYP2A6 locus are associated with smoking quantity in a ... CYP2A6 and ABCC4 genes are associated with a protective effect on chronic myeloid leukemia in the Brazilian Amazon population. ... CYP2A6 and ABCC4 genes are associated with a protective effect on chronic myeloid leukemia in the Brazilian Amazon population. ...
Common SNPs and haplotypes in DGKH are associated with bipolar disorder and schizophrenia in the Chinese Han population. Mol ... A haplotype-based study of lithium responding patients with bipolar affective disorder on the Faroe Islands. Psychiatr Genet. ... Population-based and family-based studies on the serotonin transporter gene polymorphisms and bipolar disorder: a systematic ... 4] Bipolar disorder, in particular, is seen in approximately 1% of the population. [5, 6] ...
NGF polymorphisms and haplotypes are associated with schizophrenia in Korean population. Mol Cell Toxicol 2011; 7(4): 375-80. ... Association of BDNF gene polymorphisms with schizophrenia and clinical symptoms in a Chinese population. Am J Med Genet B ... Association of the DISC1 and NRG1 genetic polymorphisms with schizophrenia in a Chinese population. Gene 2016; 590(2): 293-7. ... polymorphism is associated with age at onset and intensity of symptoms of paranoid schizophrenia in a Polish population. J ...
"Y-chromosomal STR haplotypes in three major population groups in Bulgaria" Boriana Zaharovaa, Silvia Andonovaa, Anja Gilissen, ... Bulgarias 11% Turkish population. Home » Europe » Bulgarias 11% Turkish population. Order my origin. analysis from EUR 179 ... On a second note, the same argument could be put forward for Turkey where 10%+ of the population is Kurdish, yet it is not ... I kindly an explanation why there is no Turkish origin in Bulgaria considering that 11% of the current population of Bulgaria ...
This haplotype spread throughout the Homo ancestral populations in the African continent, virtually replacing the H2′ haplotype ... Theres twopapers in Nature Genetics on the 17q21.31, and variation of haplotypes of inversions in world wide populations. ... The H2D haplotype has risen to frequencies of 10-25% in European populations with virtually no genetic variation, suggesting an ... Notably, we did not observe this haplotype in any of the African or Asian populations studied, suggesting that it may have been ...
SLC40A1 Q248H allele frequencies and associated SLC40A1 haplotypes in three West African population samples. *Autores: ... Mutation c.744G → T (Q248H), located in exon 6 of the ferroportin gene SLC40A1, is found as a polymorphism in populations of ... This mutation has been extensively analysed in African-Americans, but poorly studied in native African populations.. Ler mais ... Link: http://www.ncbi.nlm.nih.gov/pubmed/?term=SLC40A1+Q248H+allele+frequencies+and+associated+SLC40A1+haplotypes+in+three+West ...