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*  Leicester Research Archive: High levels of sequence polymorphism and linkage disequilibrium at the telomere of 12q:...
High levels of sequence polymorphism and linkage disequilibrium at the telomere of 12q: implications for telomere biology and ... The human Xp/Yp telomere-junction region exhibits high levels of sequence polymorphism and linkage disequilibrium. To determine ... Twenty polymorphic positions were in almost complete linkage disequilibrium, creating three common diverged haplotypes ...
https://lra.le.ac.uk/handle/2381/25319
*  Hitchhiker's Guide to the Galaxy on Linkage disequilibrium
The level of linkage disequilibrium between A and B can be quantified by the coefficient of linkage disequilibrium D. A. B. {\ ... The coefficient of linkage disequilibrium D. {\displaystyle D}. is not always a convenient measure of linkage disequilibrium ... Bibliography: Linkage Disequilibrium Analysis : a bibliography of more than one thousand articles on Linkage disequilibrium ... GOLD - Graphical Overview of Linkage Disequilibrium. * TASSEL -software to evaluate linkage disequilibrium, traits associations ...
http://hitchhikersgui.de/Linkage_disequilibrium
*  "Efficient mining of haplotype patterns for linkage disequilibrium mapp" by Lin L., Wong L. et al.
Linkage disequilibrium mapping is the process of finding disease gene locations through comparisons of haplotype frequencies ... Therefore, it is useful for linkage disequilibrium mapping when the users do not have such information about their datasets. © ... This work presents a new method for linkage disequilibrium mapping. The main advantage of the proposed algorithm, called ... We compared our method with some leading methods in linkage disequilibrium mapping such as HapMiner, Blade, GeneRecon, and ...
http://ink.library.smu.edu.sg/sis_research/3016/
*  Patent WO2009132089A2 - A method to identify asian soybean rust resistance quantitative trait loci ... - Google Patents
If the frequency of allele A is p, a is p', B is q and b is q', then the expected frequency (with no linkage disequilibrium) of ... As used herein, "linkage disequilibrium" is defined in the context of the relative frequency of gamete types in a population of ... 3). Two SNP markers, NSOl 18536 (R Sq , 0.050) and NSOl 13966 (R Sq , 0.150) were found to be in linkage disequilibria with the ... Two loci are said to be "genetically linked" when they are in linkage disequilibrium. ...
http://www.google.com.au/patents/WO2009132089A2?cl=en
*  Multi-stage genome-wide association study identifies new susceptibility locus for testicular germ cell tumour on chromosome...
Linkage Disequilibrium; Male; Neoplasms, Germ Cell and Embryonal; Odds Ratio; Polymorphism, Single Nucleotide; Testicular ...
http://www.forskningsdatabasen.dk/catalog/272500784
*  linkage disequilibrium | PNAS
Laura M. Shannon, Ryan H. Boyko, Marta Castelhano, Elizabeth Corey, Jessica J. Hayward, Corin McLean, Michelle E. White, Mounir Abi Said, Baddley A. Anita, Nono Ikombe Bondjengo, Jorge Calero, Ana Galov, Marius Hedimbi, Bulu Imam, Rajashree Khalap, Douglas Lally, Andrew Masta, Kyle C. Oliveira, Lucía Pérez, Julia Randall, Nguyen Minh Tam, Francisco J. Trujillo-Cornejo, Carlos Valeriano, Nathan B. Sutter, Rory J. Todhunter, Carlos D. Bustamante, and Adam R. Boyko ...
http://www.pnas.org/keyword/linkage-disequilibrium
*  Linkage disequilibrium questions
... Francesco Zito ZITO at CMNS.MNEGRI.IT Tue Jul 11 08:47:52 EST 1995 *Previous message: ... more or less in linkage disequilibrium. Why the concept of genetic 'co-segregation' is so closely connected to linkage ... Which are the mathematical basis of the 'linkage disequilibrium'? Which are the parameters considered in the analysis? I don't ... had been verified to be in strong linkage disequilibrium; in my data, anyway, one of them is present in a different frequency ...
http://www.bio.net/bionet/mm/gen-link/1995-July/000762.html
*  linkage disequilibrium analysis
... Peter Rogan progan Mon Jul 3 09:56:17 EST 1995 *Previous message: Markers for Mapping ... We would like to determine linkage disequilibrium coefficients for genotypes of genetic markers using CEPH family data. The ... Are there computer programs available to calculate Dij from LINKAGE pedfiles (unrelated grandparents with haplotypes determined ... This method also provides a test statistic that permits the null hypothesis of linkage equilibrium to be tested and sample size ...
http://www.bio.net/bionet/mm/gen-link/1995-July/000756.html
*  LINKAGE DISEQUILIBRIUM IN ISOLATED POPULATIONS OF DROSOPHILA MELANOGASTER | Genetics
LINKAGE DISEQUILIBRIUM IN ISOLATED POPULATIONS OF DROSOPHILA MELANOGASTER Message Subject (Your Name) has forwarded a page to ... LINKAGE DISEQUILIBRIUM IN ISOLATED POPULATIONS OF DROSOPHILA MELANOGASTER. Osamu Yamaguchi, Motoshi Ichinose, Muneo Matsuda and ... LINKAGE DISEQUILIBRIUM IN ISOLATED POPULATIONS OF DROSOPHILA MELANOGASTER. Osamu Yamaguchi, Motoshi Ichinose, Muneo Matsuda and ... LINKAGE DISEQUILIBRIUM IN ISOLATED POPULATIONS OF DROSOPHILA MELANOGASTER. Osamu Yamaguchi, Motoshi Ichinose, Muneo Matsuda and ...
http://www.genetics.org/content/96/2/507
*  The detection of linkage disequilibrium in molecular sequence data. | Genetics
A test for overall linkage disequilibrium, based on the sign of the observed linkage disequilibria, is derived which can use ... The detection of linkage disequilibrium in molecular sequence data. Message Subject (Your Name) has forwarded a page to you ... The detection of linkage disequilibrium in molecular sequence data.. R C Lewontin ... The detection of linkage disequilibrium in molecular sequence data.. R C Lewontin ...
https://www.genetics.org/content/140/1/377?ijkey=c09c9498d8e53981b1eacf519f770e83293a6cd1&keytype2=tf_ipsecsha
*  Linkage disequilibrium - Wikipedia
The level of linkage disequilibrium between A and B can be quantified by the coefficient of linkage disequilibrium D A B {\ ... The coefficient of linkage disequilibrium D {\displaystyle D} is not always a convenient measure of linkage disequilibrium ... Other pairs of alleles at those same two loci may have different coefficients of linkage disequilibrium. Linkage disequilibrium ... a sizable fraction of alleles are in linkage disequilibrium. An example of such linkage disequilibrium is between HLA-A1 and B8 ...
https://en.wikipedia.org/wiki/Linkage_disequilibrium
*  Linkage disequilibrium between fitness QTLs and the sugary1 allele of maize | SpringerLink
Some QTLs were in linkage disequilibrium with the maize gene Su1 and had epistatic effects on su1 fitness. These QTLs could be ... The segregation distortion of the four SNPs in linkage disequilibrium with the Sugary1 locus for the RILs released from B73 × ... The segregation distortion of the four SNPs in linkage disequilibrium with the Sugary1 locus for the RILs released from B73 × ... Felsenstein J (1965) The effect of linkage on directional selection. Genetics 52:349-363PubMedPubMedCentralGoogle Scholar ...
https://link.springer.com/article/10.1007%2Fs11032-018-0911-1
*  Linkage disequilibrium financial definition of linkage disequilibrium
What is linkage disequilibrium? Meaning of linkage disequilibrium as a finance term. What does linkage disequilibrium mean in ... Definition of linkage disequilibrium in the Financial Dictionary - by Free online English dictionary and encyclopedia. ... disequilibrium. (redirected from linkage disequilibrium). Also found in: Dictionary, Thesaurus, Medical, Acronyms, Encyclopedia ... Linkage disequilibrium financial definition of linkage disequilibrium https://financial-dictionary.thefreedictionary.com/ ...
https://financial-dictionary.thefreedictionary.com/linkage+disequilibrium
*  linkage disequilibrium analysis
Linkage Disequilibrium calculation Hi! I want to compute linkage disequilibrium r^2 value between two SNPs. One of them is only ... Long Range Linkage Disequilibrium Between Snps I want to check linkage disequilibrium between pairs of SNPs that may be more ... Linkage disequilibrium in unphased genotypic data I have been trying to complete Linkage Disequilibrium on unphased genotypic ... Pairwise linkage disequilibrium I have a file with hundreds of rsIDs in pairs. I want to test if each pair is in linkage ...
https://www.biostars.org/p/284929/
*  Mapping of End Stage Renal Disease Genetic Susceptibility in African Americans by Admixture Linkage Disequilibrium
... we will employ Mapping by Admixture Linkage Disequilibrium (MALD). analysis, a specialized form of linkage disequilibrium ... identify chromosomal loci that are in admixture linkage disequilibrium with:. - ESRD in a case-control design. - ESRD ... Mapping of End Stage Renal Disease Genetic Susceptibility in African Americans by Admixture Linkage Disequilibrium. Trial Phase ... Americans contain marker alleles that are in admixture linkage disequilibrium with ESRD. susceptibility alleles.. Objectives:. ...
http://www.knowcancer.com/cancer-trials/NCT00559767/
*  Effective Population Size, Extended Linkage Disequilibrium and Signatures of Selection in the Rare Dog Breed Lundehund
The decay of linkage disequilibrium was slow with r2 = 0.95 in 50 kb distance. The last 7-200 generations ago, Ne was at 10-13 ... The most likely estimates for FROH after removing identical-by-state segments due to linkage disequilibria were at 0.80-0.81. ...
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0122680
*  Clonal interference can cause wavelet-like oscillations of multilocus linkage disequilibrium | Journal of The Royal Society...
Clonal interference can cause wavelet-like oscillations of multilocus linkage disequilibrium Message Subject (Your Name) has ... Clonal interference can cause wavelet-like oscillations of multilocus linkage disequilibrium. Victor Garcia, Emily C. Glassberg ... Clonal interference can cause wavelet-like oscillations of multilocus linkage disequilibrium. Victor Garcia, Emily C. Glassberg ... Here, we explore how these evolutionary dynamics are mirrored in multilocus linkage disequilibrium (MLD), a measure of multi- ...
http://rsif.royalsocietypublishing.org/content/15/140/20170921
*  Complex phenotypes and phenomenon of genome-wide inter-chromosomal linkage disequilibrium in the human genome
... ... Studies of non-human species show that loci on non-homologous chromosomes can be in linkage disequilibrium (LD). I focus on the ...
https://insights.ovid.com/exgero/201112000/00080475-201112000-00003
*  Geographic components of linkage disequilibrium in natural populations of Escherichia coli. - Semantic Scholar
Ohta's D-statistics were used to partition the total variance of dilocus linkage disequilibrium into within-population and ... The observed total variance in disequilibrium (0.0339), averaged over 66 locus-pairs, was significantly greater than would be ... The magnitude of dilocus disequilibrium apparently is unrelated to the chromosomal distance between loci. This and other ... exhibited the specific dual relationship among components expected when random factors are generating disequilibrium, but 20% ...
https://www.semanticscholar.org/paper/Geographic-components-of-linkage-disequilibrium-in-Whittam-Ochman/df33257130c90f72a7310b6b2fe172b7ad92371b
*  "Comparison of Linkage Disequilibrium and Haplotype Diversity on Macro-" by Hendrik-Jan Megens, Richard PMA Crooijmans et al.
... there is limited information on differences in linkage disequilibrium (LD) and haplotype diversity between these two classes of ... Comparison of Linkage Disequilibrium and Haplotype Diversity on Macro- and Microchromosomes in Chicken. BMC Genetics 2009, 10: ... Comparison of Linkage Disequilibrium and Haplotype Diversity on Macro- and Microchromosomes in Chicken. ... "Comparison of Linkage Disequilibrium and Haplotype Diversity on Macro- and Microchromosomes in Chicken." (2009). Department of ...
https://docs.lib.purdue.edu/anscpubs/6/
*  Linkage disequilibrium in laboratory strains of Drosophila ananassae is due to drift. - Semantic Scholar
On the other hand, the same two inversions show non-random association (linkage disequilibrium) in several isofemale lines. The ... supports the notion that linkage disequilibrium is caused by drift. ... The tight linkage between the two inversions as evidenced by the results of recombination studies reported earlier, ... Linkage disequilibrium in laboratory strains of Drosophila ananassae is due to drift.. @article{Singh1990LinkageDI, title={ ...
https://www.semanticscholar.org/paper/Linkage-disequilibrium-in-laboratory-strains-of-is-Singh-Singh/4b93c2cb12ea559ea9b75225689bf96c3d9fdacb
*  Genetic structure, linkage disequilibrium and signature of selection in sorghum; lessons from physically anchored DArT markers ...
Whole genome linkage disequilibrium as measured by mean r2 decreased from 0.18 (between 0 to 10 kb) to 0.03 (between 100 kb to ... Genetic structure, linkage disequilibrium and signature of selection in sorghum; lessons from physically anchored DArT markers ... Genetic structure, linkage disequilibrium and signature of selection in sorghum; lessons from physically anchored DArT markers ... Population structure, extent of linkage disequilibrium (LD) as well as signatures of selection were investigated in sorghum ...
https://www.gov.uk/dfid-research-outputs/genetic-structure-linkage-disequilibrium-and-signature-of-selection-in-sorghum-lessons-from-physically-anchored-dart-markers
*  Linkage Disequilibrium across the UGT1A Locus Should Not Be Ignored in Association Studies of Cancer Susceptibility | Clinical...
Linkage Disequilibrium across the UGT1A Locus Should Not Be Ignored in Association Studies of Cancer Susceptibility. Wanqing ... UGT1A genes, other than UGT1A7, expressed in the liver that are in strong linkage disequilibrium with UGT1A7 may be a candidate ... Linkage Disequilibrium across the UGT1A Locus Should Not Be Ignored in Association Studies of Cancer Susceptibility ... Linkage Disequilibrium across the UGT1A Locus Should Not Be Ignored in Association Studies of Cancer Susceptibility ...
http://clincancerres.aacrjournals.org/content/11/3/1348
*  ETIS - High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a model
Remm, M.; Metspalu, A. (2002). High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a ... High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a model ... High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a model. ...
https://www.etis.ee/Portal/Publications/Display/0a83f7a7-67fc-4d27-b63f-e5621d8a9344