Globuloviridae - WikipediaGlobuloviridae - Wikipedia

"Morphology and genome organization of the virus PSV of the hyperthermophilic archaeal genera Pyrobaculum and Thermoproteus: a ... Genomes are linear and non-segmented, around 20-30kb in length. Viral replication is cytoplasmic. Dna templated transcription ...
more infohttps://en.wikipedia.org/wiki/Globuloviridae

RadB acts in homologous recombination in the archaeon Haloferax volcanii, consistent with a role as recombination mediator  -...RadB acts in homologous recombination in the archaeon Haloferax volcanii, consistent with a role as recombination mediator -...

RadB, a paralogue of RadA, is present in many archaeal species. RadB has previously been proposed to function as a ... Regulation of recombination is essential since defects can lead to genome instability and chromosomal rearrangements. Strand ...
more infohttp://eprints.nottingham.ac.uk/42849/

Evolution and function of bacterial and archaeal genome sequences | Frontiers Research TopicEvolution and function of bacterial and archaeal genome sequences | Frontiers Research Topic

... genome signatures). The variations in bacterial and archaeal genome DNA sequences are not only explained by neutral mutations. ... However, some bacteria, for example Actinobacteria, have maintained a high GC content genome. In addition, genomes with similar ... have short and low GC content genomes. In bacterial genomes, mutations from GC to adenosine-thymine (AT) are more common than ... Genome size and GC content are weakly correlated in bacteria and archaea. The obligate host-associated bacteria (with the ...
more infohttps://www.frontiersin.org/research-topics/1011/evolution-and-function-of-bacterial-and-archaeal-genome-sequences

List of sequenced archaeal genomes - WikipediaList of sequenced archaeal genomes - Wikipedia

... totalling 150 Archaeal genomes. Genome project Human microbiome project Lists of sequenced genomes Bult, CJ; White, O; Olsen, ... This list of sequenced archaeal genomes contains all the archaea known to have publicly available complete genome sequences ... GOLD:Genomes OnLine Database v 2.0 SUPERFAMILY comparative genomics database Includes genomes of completely sequenced archaea, ... Currently in this list there are 39 genomes belonging to Crenarchaeota species, 105 belonging to the Euryarchaeota, 1 genome ...
more infohttps://en.wikipedia.org/wiki/List_of_sequenced_archaeal_genomes

MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes | BMC Bioinformatics | Full TextMED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes | BMC Bioinformatics | Full Text

... but also facilitate comparative studies of prokaryotic genomes. This paper describes a new prokaryotic genefinding algorithm ... of comprehensive understanding of prokaryotic gene structures prevents from further elucidation of differences among genomes. ... Furthermore, MED 2.0 adapts to a broad range of archaeal genome as well as to bacterial genomes. For archaeal genomes with more ... The advantage of the MED 2.0 is particularly evident for GC-rich genomes and archaeal genomes. Furthermore, the genome-specific ...
more infohttps://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-8-97

Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and...Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and...

... and ArsR families were universally and abundantly identified in all the archaeal genomes. We found that archaeal TFs are ... In this work, 3,918 TFs were identified and exhaustively analyzed in 52 archaeal genomes. TFs represented less than 5% of the ... Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and ... Identification and Genomic Analysis of Transcription Factors in Archaeal Genomes Exemplifies Their Functional Architecture and ...
more infohttps://scholarworks.iupui.edu/handle/1805/6266

Bacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost(Journal Article) | DOE PAGESBacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost(Journal Article) | DOE PAGES

Bacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost. United States: N. p., 2019. Web. doi: ... Bacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost. United States. doi:10.1128/mra.00516-19 ... Wed . "Bacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost". United States. doi:10.1128/mra. ... title = {Bacterial and Archaeal Metagenome-Assembled Genome Sequences from Svalbard Permafrost},. author = {Xue, Yaxin and ...
more infohttps://www.osti.gov/pages/biblio/1572795-bacterial-archaeal-metagenome-assembled-genome-sequences-from-svalbard-permafrost

Cell cycle transcription factor e2f-dp  family domain assignments  in  all archaeal genomesCell cycle transcription factor e2f-dp family domain assignments in all archaeal genomes

Cell cycle transcription factor e2f-dp family domain assignments in all archaeal genomes. Domain assignment details for each ... all archaeal genomes. No domain assignments for these genomes.. Add assignments from groups of genomes. View all assignments ... Home > Genomes > Cell cycle transcription factor e2f-dp domains in all archaeal genomes ... Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ] ...
more infohttp://supfam.mrc-lmb.cam.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=46847&listtype=fa&cgi_arcd=yes

Integrative modeling of gene and genome evolution roots the archaeal tree of lifeIntegrative modeling of gene and genome evolution roots the archaeal tree of life

In contrast to proposals suggesting that genome reduction has been the predominant mode of archaeal evolution, our analyses ... Integrative modeling of gene and genome evolution roots the archaeal tree of life. ... A root for the archaeal tree is essential for reconstructing the metabolism and ecology of early cells and for testing ... Here we constructed a consensus unrooted archaeal topology using protein concatenation and a multigene supertree method based ...
more infohttps://library.wur.nl/WebQuery/wurpubs/562821

A Dimeric Rep Protein Initiates Replication of a Linear Archaeal Virus Genome: Implications for the Rep Mechanism and Viral...A Dimeric Rep Protein Initiates Replication of a Linear Archaeal Virus Genome: Implications for the Rep Mechanism and Viral...

The genome of the archaeal virus SIRV1 has features in common with genomes of eukaryal viruses. Virology 281:6-9. ... Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: relationships to the archaeal lipothrixvirus ... Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. Virus Res. 117:52-67. ... Genome Replication and Regulation of Viral Gene Expression. A Dimeric Rep Protein Initiates Replication of a Linear Archaeal ...
more infohttps://jvi.asm.org/content/85/2/925?ijkey=40918ce9d59fd3b7509317ee50a807a266493ae2&keytype2=tf_ipsecsha

Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes |...Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes |...

... we are concerned with here are mainly used to examine similarities between archaeal and bacterial DNA from different genomes. ... The dinucleotide ZOM method produced high correlation values when used to compare real genomes to an artificially constructed ... random genome with similar %GC, and should therefore be used with care. The tetranucleotide ZOM measure was a good measure to ... The increasing number of sequenced prokaryotic genomes contains a wealth of genomic data that needs to be effectively analysed ...
more infohttps://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-9-104

Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life.  - PubMed - NCBIEvolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. - PubMed - NCBI

Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life.. Prangishvili D1, Garrett RA, ... Here we describe a re-analysis of the proteins encoded by archaeal viruses, with an emphasis on comparative genomics of the ... In accord with this distinction, the sequenced genomes of euryarchaeal viruses encode many proteins homologous to bacteriophage ... In contrast, initial analysis of the crenarchaeal viral genomes revealed no relationships with bacteriophages and, generally, ...
more infohttps://www.ncbi.nlm.nih.gov/pubmed/16503363?dopt=Abstract

When evaluating bacterial and archaeal genomes for genes, why must researchers evaluate six open reading frames? - AnswerMenuWhen evaluating bacterial and archaeal genomes for genes, why must researchers evaluate six open reading frames? - AnswerMenu

When evaluating bacterial and archaeal genomes for genes, why must researchers evaluate six open reading frames? ... is the substance that differentiates a bacterial cell from an archaeal cell. ...
more infohttp://www.answermenu.com/3189/evaluating-bacterial-archaeal-researchers-evaluate-reading

Why sequence ammonia-oxidizing archaeal enrichment culture? - DOE Joint Genome InstituteWhy sequence ammonia-oxidizing archaeal enrichment culture? - DOE Joint Genome Institute

From Genome to Watershed Scales. Microbial Functions at Soil-Aquatic Interfaces. DNA Methylation Role in Basal Fungi. Fungal ... DAS Tool for Genome Reconstruction from Metagenomes. Through the JGIs Emerging Technologies Opportunity Program (ETOP), ... Researchers from the U.S. Department of Energy Joint Genome Institute (DOE JGI) have developed a suite of build-optimization ... Why sequence ammonia-oxidizing archaeal enrichment culture?. Ammonia-oxidizing bacteria are key players in the nitrogen cycle ...
more infohttps://jgi.doe.gov/why-sequence-ammonia-oxidizing-archaeal-enrichment-culture/

Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea | Biology Direct |...Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea | Biology Direct |...

Snel B, Bork P, Huynen MA: Genomes in flux: the evolution of archaeal and proteobacterial gene content. Genome Res 2002,12(1): ... Table 1 lists the basic features of the analyzed archaeal genomes. The now available set of genomes represents reasonably well ... New Archaeal Clusters of Orthologous Genes (arCOGs) were constructed for 41 archaeal genomes (13 Crenarchaeota, 27 ... gene-content tree based on the presence-absence of arCOGs in archaeal genome and estimated the evolution of the archaeal genome ...
more infohttps://0-biologydirect-biomedcentral-com.brum.beds.ac.uk/articles/10.1186/1745-6150-2-33

Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea | Biology Direct |...Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea | Biology Direct |...

New Archaeal Clusters of Orthologous Genes (arCOGs) were constructed for 41 archaeal genomes (13 Crenarchaeota, 27 ... The archaeal gene core (protein-coding genes found in all 41 genome) consists of 166 arCOGs. The arCOGs were used to ... The arCOGs provide a convenient, flexible framework for functional annotation of archaeal genomes, comparative genomics and ... The Last Archaeal Common Ancestor (LACA) is conservatively estimated to possess 996 genes compared to 1245 and 1335 genes for ...
more infohttps://biologydirect.biomedcentral.com/articles/10.1186/1745-6150-2-33/figures/2

The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens | PNASThe complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens | PNAS

Comparative analysis of the M. kandleri genome and other sequenced archaeal and bacterial genomes led to three principal ... suggesting that there are fewer traces of horizontal gene exchange with bacteria in this genome than in other archaeal genomes ... All archaeal genomes sequenced so far encode a substantial number of predicted DNA-binding proteins of the helix-turn-helix and ... The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens. Alexei I. Slesarev, ...
more infohttps://www.pnas.org/content/99/7/4644?ijkey=aece692341e2f7a11d3c26f2a5d862c9c3afe529&keytype2=tf_ipsecsha

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life - DOE Joint Genome Institute1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life - DOE Joint Genome Institute

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. Published in:. Nat Biotechnol ( ... 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life ... This Resource is the largest single release of reference genomes to date. Bacterial and archaeal isolate sequence space is ... Most of the genomes were uncovered using a "mini-metagenomics" approach that reduced the complexity of the soil microbial ...
more infohttps://jgi.doe.gov/publication/1003-reference-genomes-of-bacterial-and-archaeal-isolates-expand-coverage-of-the-tree-of-life/

The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.  - PubMed - NCBIThe complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens. - PubMed - NCBI

The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens.. Slesarev AI1, ... The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens ... The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens ... The complete genome of hyperthermophile Methanopyrus kandleri AV19 and monophyly of archaeal methanogens ...
more infohttps://www.ncbi.nlm.nih.gov/pubmed?cmd=search&term=Mezhevaya+KV%5Bau%5D&dispmax=50

Genome sequence of a novel archaeal fusellovirus assembled fro...Genome sequence of a novel archaeal fusellovirus assembled fro...

The consensus genome sequence of a new member of the fa ... Genome sequence of a novel archaeal fusellovirus assembled from ... Genome sequence of a novel archaeal fusellovirus assembled from the metagenome of a mexican hot spring.. Authors * Servín- ... Genome Announcements 2169-8287 Publisher. American Society for Microbiology Publication Date. Jan 01, 2013 Volume. 1 Issue. 2 ... The complete circular genome was recovered from a metagenomic study of a Mexican hot spring. SMF1 exhibits an exceptional ...
more infohttps://www.mysciencework.com/publication/show/genome-sequence-novel-archaeal-fusellovirus-assembled-from-metagenome-mexican-hot-spring-f2eba2c8

A Dimeric Rep Protein Initiates Replication of a Linear Archaeal Virus Genome: Implications for the Rep Mechanism and Viral...A Dimeric Rep Protein Initiates Replication of a Linear Archaeal Virus Genome: Implications for the Rep Mechanism and Viral...

A Dimeric Rep Protein Initiates Replication of a Linear Archaeal Virus Genome: Implications for the Rep Mechanism and Viral ... The Rudiviridae are a family of rod-shaped archaeal viruses with covalently closed, linear double-stranded DNA (dsDNA) genomes ... Here we report that a protein encoded in the 34-kbp genome of the rudivirus SIRV1 is a member of the replication initiator (Rep ...
more infohttps://risweb.st-andrews.ac.uk/portal/en/researchoutput/a-dimeric-rep-protein-initiates-replication-of-a-linear-archaeal-virus-genome-implications-for-the-rep-mechanism-and-viral-replication

Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures  -...Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures -...

Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures ... Structure and genome organization of AFV2, a novel archaeal lipothrixvirus with unusual terminal and core structures. Journal ... gene containing a 12-bp archaeal intron, and a 1,008-bp repeat-rich region near the center of the genome. ... The double-stranded DNA genome contains 31,787 bp and carries eight open reading frames homologous to those of other ...
more infohttps://epub.uni-regensburg.de/13287/

9780077510589 - Connect Access Card with LearnSmart for | eCampus.com9780077510589 - Connect Access Card with LearnSmart for | eCampus.com

Bacterial Genome Replication and Expression. 14. Regulation of Bacterial Cellular Processes 15. Eukaryotic and Archaeal Genome ... 4. Archaeal Cell Structure 5. Eukaryotic Cell Structure 6. Viruses and Other Acellular Infectious Agents. Part Two Microbial ...
more infohttp://www.ecampus.com/connectplus-access-card-learnsmart/bk/9780077510589

Hematology and Medical OncologyHematology and Medical Oncology

Archaeal genome and cancerogenesis Stupar Milanko Stefanovic Slavica Review Article. December 29, 2017 ...
more infohttps://www.oatext.com/Hematology-Medical-Oncology-HMO.php

Prescotts MicrobiologyPrescott's Microbiology

Eukaryotic and Archaeal Genome Replication and Expression Chapter: 16. Mechanisms of Genetic Variation Chapter: 17. Recombinant ... Eukaryotic and Archaeal Genome Replication and Expression Chapter: 16. Mechanisms of Genetic Variation Chapter: 17. Recombinant ... Chapter: 4. Archaeal Cell Structure Chapter: 5. Eukaryotic Cell Structure Chapter: 6. Viruses and Other Acellular Infectious ... Chapter: 4. Archaeal Cell Structure Chapter: 5. Eukaryotic Cell Structure Chapter: 6. Viruses and Other Acellular Infectious ...
more infohttps://www.mheducation.com/highered/product/prescott-s-microbiology-willey-sherwood/1259669939.html