Predicting evolutionary site variability from structure in viral proteins: buriedness, flexibility, and design. Journal of ... Identifying structural variation in haploid microbial genomes from short-read re-sequencing data using breseq. ... with important data troves coming from the Affordable Care Acts electronic health record mandates and the 1000 genomes project ...

Chiang DY, Brown PO, Eisen MB "Visualizing associations between genome sequences and gene expression data using genome-mean ... Renne R, Barry C, Dittmer D, Compitello N, Brown PO, Ganem D "Modulation of cellular and viral gene expression by the latency- ... Hurowitz EH, Brown PO "Genome-wide analysis of mRNA lengths in Saccharomyces cerevisiae." Genome Biol 2003; 5: 1: R2 ... Yoshimoto H, Saltsman K, Gasch AP, Li HX, Ogawa N, Botstein D, Brown PO, Cyert MS "Genome-wide analysis of gene expression ...

Viral metagenomic studies have led to the discovery of many previously unknown viruses. These endeavors have generated a vast ... Finally, the authors generated 15 draft genomes of new microbial species. A number of earlier studies have also attempted to ... amount of viral sequences for which the majority of sequences are reported as unknown [23]. It is worth noting that viral ... Metagenomic discovery of biomass-degrading genes and genomes from cow rumen. Science, 2011. ...

Genome Biol, 8, R26. [88] 10. Hernandez-Lucas,I. Ramirez-Trujillo,J.A. Gaitan,M.A. Guo,X. Flores,M. Martinez-Romero,E. Perez- ... Mexico reveals the presence of particular sulfur-oxidizing bacterial and viral communities. Microorganisms. 8(11):1677.[30] ... Tracing the phylogenetic history of the Crl regulon through the Bacteria and Archaea genomes. BMC Genomics. 20, 299 [39] ... Genome misclassification of Klebsiella variicola and Klebsiella quasipneumoniae isolated from plants, animals and humans. Salud ...