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*  TransRate: reference-free quality assessment of de novo transcriptome assemblies. - Oxford Neuroscience
Computational Biology, Gene Expression Profiling, High-Throughput Nucleotide Sequencing, RNA, Long Noncoding, RNA, Messenger, ...
https://www.neuroscience.ox.ac.uk/publications/628076
*  HBD fusions - Picard Lab home
Comparative gene expression profile analysis of GLI and cMYC in an epithelial model of malignant transformation. Cancer Res. 62 ... A new system for regulated functional gene expression for gene therapy applications: Nuclear delivery of a p16INK4A-estrogen ... Positive and negative regulation of gene expression in eukaryotic cells with an inducible transcriptional regulator. Gene Ther ... Modulation of cyclin gene expression by adenovirus E1A in a cell line with E1A-dependent conditional proliferation. J. Virol. ...
http://spotidoc.com/doc/695589/hbd-fusions---picard-lab-home
*  GRNsight: a web application and service for visualizing models of small- to medium-scale gene regulatory networks [PeerJ]
... consists of genes, transcription factors, and the regulatory connections between them which govern the level of expression of ... Nodes are rectangular and support gene labels of up to 12 characters. The edges are arcs, which become straight lines when the ... from the model which represent the direction and magnitude of the influence of a transcription factor on its target gene, so we ... graph based on an Excel spreadsheet containing an adjacency matrix where regulators are named in the columns and target genes ...
https://peerj.com/articles/cs-85/
*  Application of affymetrix array and massively parallel signature sequencing for identification of genes involved in prostate...
Our data indicates that transcriptome profiling with a single methodology will not fully assess the expression of all genes in ... Analysis of the combined transcriptomes identified 66 genes unique to LNCaP cells and 33 genes unique to C4-2 cells. Expression ... 3,180 genes were only detected by Affymetrix and 1,169 genes were only detected by MPSS. Similarly, in C4-2, 4,121 genes were ... transcription profiling technologies such as DNA array and MPSS provides a more robust means to assess the expression profile ...
https://digital.lib.washington.edu/researchworks/handle/1773/15859
*  Partition decoupling for multi-gene analysis of gene expression profiling data | BMC Bioinformatics | Full Text
This is particularly useful when examining gene expression profiles of complex diseases, where single-gene etiologies are rare ... As an example of how causative genes can be missed in gene-centric analyses, consider a recent study in which gene expression ... microarray gene expression profiling experiments have become a ubiquitous tool in the study of disease. The vast number of gene ... to gene expression microarray data. This method may be used to classify samples based on multi-gene expression patterns and to ...
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-12-497
*  Evaluation of TransPlex Whole Transcriptome Amplification method for microarray gene expression profiling | Archivio...
Evaluation of TransPlex Whole Transcriptome Amplification method for microarray gene expression profiling / C. Peano, M. ... Evaluation of TransPlex Whole Transcriptome Amplification method for microarray gene expression profiling. ... Evaluation of TransPlex Whole Transcriptome Amplification method for microarray gene expression profiling ... The increased use of microarray expression profiling to study both the molecular biology of cancer and the cellular physiology ...
https://air.unimi.it/handle/2434/62290
*  Global Gene Expression Profiling in Retinopathy of Prematurity | IOVS | ARVO Journals
The expression profiles were studied by Gene Expression module (Gx) using the Genome Studio software and statistical analysis ... The present study aimed to identify gene(s) responsible for ROP progression by a global gene expression profiling. ... Global Gene Expression Profiling in Retinopathy of Prematurity Inderjeet Kaur; Sonika Rathi; Subhadra Jalali; Ramesha Kekunaya ... Global Gene Expression Profiling in Retinopathy of Prematurity You will receive an email whenever this article is corrected, ...
http://iovs.arvojournals.org/article.aspx?articleid=2336681
*  Senescent vs. non-senescent cells in the human annulus in vivo: Cell harvest with laser capture microdissection and gene...
examined senescent fibroblasts and mammary epithelial cells [13]. These studies, and gene expression profiling studies [14], ... gene, and Ras homolog gene family member H.. Table 3 Cell Proliferation or Cell Cycle Genes with Significant Expression ... Senescence-Related Genes with Significant Differences in Gene Expression Levels in Senescent vs. Non-Senescent Annulus Cells ... expression of growth factors and genes related to inflammation, genes related to cells signaling, and those to apoptosis. ...
https://bmcbiotechnol.biomedcentral.com/articles/10.1186/1472-6750-10-5
*  Gene Expression Profiling Analysis of Bisphenol A-Induced Perturbation in Biological Processes in ER-Negative HEK293 Cells -...
Gene Expression Profiling Analysis of Bisphenol A-Induced Perturbation in Biological Processes in ER-Negative HEK293 Cells. . ... Gene expression profiling analysis identified a list of differentially expressed genes in response to BPA exposure in HEK293 ... Gene Expression Profiling Analysis of Bisphenol A-Induced Perturbation in Biological Processes in ER-Negative HEK293 Cells. ... Gene Expression Profiling Analysis of Bisphenol A-Induced Perturbation in Biological Processes in ER-Negative HEK293 Cells - ...
http://libros.duhnnae.com/2017/jun8/149838335680-Gene-Expression-Profiling-Analysis-of-Bisphenol-A-Induced-Perturbation-in-Biological-Processes-in-ER-Negative-HEK293-Cells.php
*  Gene expression profiling of meningiomas: current status after a decade of microarray-based transcriptomic studies
... Type. Peer ... MeningiomaMicroarray analysisOligonucleotide array sequence analysisGene expression profiling Collections. * Department of ... We discuss some future prospects and challenges ahead in the field of gene expression profiling. Methods We performed a ... "gene expression profiling". Only original research articles in English that had used RNA hybridized to high-resolution ...
http://bora.uib.no/handle/1956/5216
*  Intramyocyte Detection of Epstein-Barr Virus Genome by Laser Capture Microdissection in Patients With Inflammatory...
... including the selective study of the gene-expression profile of different cells, either resident or injected in the heart, ... which plays a key role in the induction of proinflammatory gene expression and has been implicated in the pathogenesis of ... Expression of endocrine gland-derived vascular endothelial growth factor in ovarian carcinoma. Clin Cancer Res. 2003; 9: 264- ... The serological profile was consistent with a past EBV infection in all 9 cases. Specifically, anti-VCA IgM and anti-EBNA IgM ...
http://circ.ahajournals.org/content/110/23/3534
*  SOAPdenovo-Trans: De novo transcriptome assembly with short RNA-Seq reads. | RNA-Seq Blog
... and two other popular transcriptome assemblers handled such practical issues as alternative splicing and variable expression ... Transcriptome sequencing has long been the favored method for quickly and inexpensively obtaining a large number of gene ... These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009) ... EGSEA - easy and efficient ensemble gene set testing. *RNA-Seq discovers genes that repair spinal cord in fish are also in ...
http://www.rna-seqblog.com/soapdenovo-trans-de-novo-transcriptome-assembly-with-short-rna-seq-reads-2/
*  Comprehensive Gene Expression Analysis of Prostate Cancer Reveals Distinct Transcriptional Programs Associated with Metastatic...
Identification of genes, gene expression profiles, and biological pathways that contribute to metastasis will be of significant ... Gene Expression Analysis Using Oligonucleotide Arrays.. We analyzed gene expression in prostate samples using hybridization of ... Gene expression analysis was carried out using Affymetrix U95 human gene arrays with 63,175 features for individual gene/EST ... serial analysis of gene expression, and other published data verified expression in prostate sample for many genes (10, 11, 12 ...
http://cancerres.aacrjournals.org/content/62/15/4499.full
*  Revealing strengths and weaknesses of methods for gene network inference - Zurich Open Repository and Archive
... of genes. The results of this community-wide experiment show that reliable network inference from gene expression data remains ... Performance profiling reveals that current inference methods are affected, to various degrees, by different types of systematic ... of genes. The results of this community-wide experiment show that reliable network inference from gene expression data remains ... Numerous methods have been developed for inferring gene regulatory networks from expression data, however, both their absolute ...
http://www.zora.uzh.ch/id/eprint/39548/
*  Gene expression profiling - Wikipedia
... gene expression profiling is the measurement of the activity (the expression) of thousands of genes at once, to create a global ... Categorizing regulated genes[edit]. Having identified some set of regulated genes, the next step in expression profiling ... is more relevant than knowing how much messenger RNA is made from each gene, gene expression profiling provides the most global ... Gene set analysis demonstrated several major advantages over individual gene differential expression analysis.[17][18] Gene ...
https://en.wikipedia.org/wiki/Gene_expression_profiling
*  Gene Expression Profiling | SpringerLink
Gene expression (GE) analyses by use of microarrays (MAs) have become an important part of biomedical and clinical research and ... Gene expression profiling of hairy cell leukemia reveals a phenotype related to memory B cells with altered expression of ... Prognostically useful gene-expression profiles in acute myeloid leukemia. N Engl J Med. 2004;350:1617-1628.CrossRefPubMedGoogle ... Gene expression profiling of pediatric acute myelogenous leukemia. Blood. 2004;104:3679-3687.CrossRefPubMedGoogle Scholar ...
https://link.springer.com/chapter/10.1007/978-1-4419-5698-9_13
*  Computational Diagnostics with Gene Expression Profiles | SpringerLink
Gene expression profiling using micro-arrays is a modern approach for molecular diagnostics. In clinical micro-array studies, ... Micro-arrays gene expression profiles statistical classification supervised machine learning gene selection model assessment ... 2002) Gene expression profiling predicts clinical outcome of breast cancer. Nature 415, 530-536.CrossRefGoogle Scholar ... 2005)A global approach to the diagnosis of leukemia using gene expression profiling. Blood 106, 1189-1198.PubMedCrossRefGoogle ...
https://link.springer.com/protocol/10.1007%2F978-1-60327-429-6_15
*  Rosetta Opens Gene Expression Profiling Facility | GenomeWeb
At the facility, researchers will use image analysis technology and molecular biology processes to generate gene expression ... Rosetta Inpharmatics inaugurated Thursday a new gene expression profiling facility in Bothell, Wash. ... NEW YORK, December 14 - Rosetta Inpharmatics inaugurated Thursday a new gene. expression profiling facility in Bothell, Wash.. ... Our new facility in Bothell will help us further our efforts in gene. expression research, and will advance our goal to develop ...
https://www.genomeweb.com/archive/rosetta-opens-gene-expression-profiling-facility
*  Tools for genetics and genomics: Gene expression profiling
The phenotypic expression of these genes, through the synthesis of specific proteins, involves interaction with envi ... The genetic basis for disease is determined by the inheritance of genes containing specific sequences of deoxyribonucleic acid ... changes in gene expression take place that result in the expression of hundreds of gene products and the suppression of others ... Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U ...
https://www.uptodate.com/contents/tools-for-genetics-and-genomics-gene-expression-profiling
*  gene expression profiling
Gene Expression Can Predict the Survival of Lymphoma Patients. December 5, 2008 , by Walter Jessen ... The experiment used DNA microarray technology to analyze each patient's tumors for the expression of genes associated with ... A study published last week in the New England Journal of Medicine identified sets of genes in diffuse large B-cell lymphoma ... Few of these diseases can be treated in the same way, since the genes responsible for a variety of biological processes - DNA ...
https://www.highlighthealth.com/tag/gene-expression-profiling/
*  Gene Expression Profiling in Human High-Grade Astrocytomas
... Zhongyu Liu,1 Zhiqiang Yao,2 Chao Li,3 Yicheng Lu,4 and Chunfang ... Zhongyu Liu, Zhiqiang Yao, Chao Li, Yicheng Lu, and Chunfang Gao, "Gene Expression Profiling in Human High-Grade Astrocytomas ...
https://www.hindawi.com/journals/ijg/2011/245137/cta/
*  Gene Expression Profiling
Home -, Genomics -, Gene Expression Profiling Gene Expression Profiling. * Human Genome-wide Expression Profiling by Multiplex- ... Mouse Targeted Expression Profiling by Multiplex-RT PCR and subsequent NGS * Plate Based Gene Expression Profiling ( ... Human Targeted Expression Profiling by Multiplex-RT PCR and subsequent NGS * ... Next Generation Sequencing Protein Expression Transcription Factors Cell Signaling & Tracking Multiplex Cytokine Assays Gene ...
https://www.biocat.com/genomics/gene-expression-profiling
*  Gene Expression Profiling | Technology Trends
Other articles related to 'gene, gene expression, expression, expression profiling, gene expression profiling, genes':. ... Gene expression profiling In an mRNA or gene expression profiling experiment the expression levels of thousands of genes are ... Gene Expression Profiling. In the field of molecular biology, gene expression profiling is the measurement of the activity (the ... Gene Expression Profiling - Conclusions. ... Expression profiling provides new information about what genes do under various ...
http://www.primidi.com/gene_expression_profiling
*  Patent US8182995 - Real time gene expression profiling - Google Patents
Gene expression browser for web-based search and visualization of characteristics of gene expression. ... Gene expression browser for web-based search and visualization of characteristics of gene expression. ... Measurement of gene expression profiles in toxicity determination. US6479235. 25 Nov 1998. 12 Nov 2002. Promega Corporation. ... Methods and systems for dynamic gene expression profiling. WO2004048528A2. 21 Nov 2003. 10 Jun 2004. Primera Biosystems. ...
http://www.google.ca/patents/US8182995
*  Successful Gene Expression Profiling Performed on Embryos | Medgadget
Successful Gene Expression Profiling Performed on Embryos. May 14th, 2008 Editors News ... Article abstract in Human Reproduction: Gene expression profiling of human oocytes following in vivo or in vitro maturation. ... Through this, the abstracts and research profiles of our speakers and organizing committee members are getting global ...
https://www.medgadget.com/2008/05/successful_gene_expression_profiling_performed_on_embryos.html