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*  Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and...
Federhen S. The NCBI Taxonomy database. Nucleic Acids Res. 2012; 40(D1):D136-D143 View ArticlePubMed. ... Nakamura Y, Cochrane G and Karsch-Mizrachi I. The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res. ... BioProject and BioSample databases at NCBI: facilitating capture and organization of metadata. Nucleic Acids Res. 2012; 40(D1): ... ArrayExpress update-trends in database growth and links to data analysis tools. Nucleic Acids Res. 2013; 41:D987-D990 View ...
http://standardsingenomics.org/content/9/3/1275/
*  astroviridae - Page 2
In the current study, a multiplex real-time nucleic acid sequence-based amplification (RT-NASBA) system was developed for the ... C sequences of similar type-3 HAstV identified from European and extra-European countries were retrieved in the databases, ... Rapid and simultaneous detection of three major diarrhea-causing viruses by multiplex real-time nucleic acid sequence-based ...
https://astroviridae.wordpress.com/page/2/
*  FAIRsharing: biodbcore-000001: GenBank
Nucleic Acids Res. 2012 View Paper (PubMed) GenBank.. Benson DA., Karsch-Mizrachi I., Lipman DJ., Ostell J., Sayers EW., ... GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences. GenBank is part ... of the International Nucleotide Sequence Database Collaboration, which comprises the DNA DataBank of Japan (DDBJ), the European ...
https://fairsharing.org/biodbcore-000001
*  Development of reverse transcription loop-mediated isothermal amplification (RT-LAMP) as a diagnostic tool of Toxoplasma gondii...
Nucleic Acid Amplification Techniques/veterinary*. *RNA, Protozoan/genetics. *RNA, Ribosomal, 18S/genetics ... Search database. All Databases. Assembly. Biocollections. BioProject. BioSample. BioSystems. Books. ClinVar. Clone. Conserved ...
https://www.ncbi.nlm.nih.gov/pubmed/23146414
*  Frontiers | Exploration of Using Antisense Peptide Nucleic Acid (PNA)-cell Penetrating Peptide (CPP) as a Novel Bactericide...
We determined that a 10-nucleotide oligomer of peptide nucleic acid (PNA) targeting the start codon region of an essential gene ... We determined that a 10-nucleotide oligomer of peptide nucleic acid (PNA) targeting the start codon region of an essential gene ... Antisense antimicrobials are oligomers of nucleic acid homologs with antisense sequence of essential genes in bacteria. The ... Antisense antimicrobials are oligomers of nucleic acid homologs with antisense sequence of essential genes in bacteria. The ...
https://www.frontiersin.org/articles/10.3389/fmicb.2017.00687/full
*  List of sequenced bacterial genomes - Wikipedia
2004). "Comparative analysis of the Borrelia garinii genome". Nucleic Acids Res. 32 (20): 6038-46. doi:10.1093/nar/gkh953. PMC ... A few of the listed genomes may not be in the INSDC database, but in other public databases[verification needed]. Genomes ... 2005). "Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent". Nucleic Acids Res. 33 (22): ... 2005). "Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery". Nucleic Acids Res. 33 ...
https://en.wikipedia.org/wiki/List_of_sequenced_bacterial_genomes
*  NALD: Nucleic Acids and Ligands Database | SpringerLink
... that bind nucleic acids (NA) and provide users with sets of specific information in relation to... ... The nucleic acids and ligands database (NALD) is concerned with the identification of ligands (drugs) ... The nucleic acids and ligands database (NALD) is concerned with the identification of ligands (drugs) that bind nucleic acids ( ... Bioinformatics Database Data mining Data integration Nucleic acids Binding motifs Ligands Drugs Diseases ...
https://link.springer.com/chapter/10.1007/978-3-319-00560-7_36
*  Nucleic Acids Research Database (Example) - MindMeister
Why we need to group these databases?, Why databases are created and shared?, Why some databases are no longer in the databases ... and dropped from it?, Organisation of databases and its major grouping: (Categories list), Evolution of NAR database, Prepared ... Nucleic Acids Research Database, Numbers available :, Criteria for selection into NAR databases, ... Nucleic Acids Research Database. by Yee Ling Chew 1. Numbers available :. 1.1. 1512 online databases sorted into 14 categories ...
https://www.mindmeister.com/266275595/nucleic-acids-research-database
*  Mascot database search: Nucleic acid translation
Nucleic acid translation. The IUPAC-IUB Encoding for Nucleic Acids. Value. Symbol. Name. ... During a search of a nucleic acid database, Mascot uses the taxonomy of each entry to choose the correct genetic code. If no ... Taxonomy can also be defined at a database level, to handle species specific databases such as EST_human. ... Although Mascot could try to determine whether a database entry is mitochondrial by performing a keyword search of the FASTA ...
http://www.matrixscience.com/help/na_translation_help.html
*  The Nucleic Acid Database - International Tables for Crystallography - Schneider - Wiley Online Library
If you are a society or association member and require assistance with obtaining online access instructions please contact our Journal Customer Services team ...
http://onlinelibrary.wiley.com/doi/10.1107/97809553602060000897/pdf
*  Structure Cluster - 3O3G: T. maritima RNase H2 in complex with nucleic acid substrate and calcium ions 3D Similarity...
Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage. ... Data growth and its impact on the SCOP database: new developments.. Nucl. Acids Res. 2008 36: D419-D425 ... T. maritima RNase H2 in complex with nucleic acid substrate and calcium ions. ...
http://www.rcsb.org/pdb/explore/structureCluster.do?structureId=3O3G
*  RCSB PDB - 1NND: Arginine 116 is Essential for Nucleic Acid Recognition by the Fingers Domain of Moloney Murine...
Structural and energetic characterization of nucleic acid-binding to the fingers domain of Moloney murine leukemia virus ... Arginine 116 is Essential for Nucleic Acid Recognition by the Fingers Domain of Moloney Murine Leukemia Virus Reverse ...
http://www.rcsb.org/pdb/explore/materialsAndMethods.do?structureId=1NND
*  RCSB PDB - 3GO5: Crystal structure of a multidomain protein with nucleic acid binding domains (sp 0946) from streptococcus...
Crystal structure of a multidomain protein with nucleic acid binding domains (sp_0946) from streptococcus pneumoniae tigr4 at ... Crystal structure of a multidomain protein with nucleic acid binding domains (sp_0946) from streptococcus pneumoniae tigr4 at ... a unique RNA binding protein that is formed from a concatenation of well-known structural modules that bind nucleic acids: ...
https://www.rcsb.org/structure/3GO5
*  IUCr) Acta Crystallographica Section D Volume 54, Part 6, Number 1 November 1998
A description is given of how the Nucleic Acid Database (NDB) is used to study nucleic acids. In addition, the way in which the ... nucleic acids and other biological macromolecules, with approximately 8000 entries, is described. ... Classifying a Protein in the CATH Database of Domain Structures. C. A. Orengo, A. M. Martin, G. Hutchinson, S. Jones, D. J. ... The CATH database of protein domain structures classifies structures according to their (C)lass, (A)rchitecture, (T)opology or ...
http://journals.iucr.org/d/issues/1998/06/01/
*  Acta Crystallographica - Wikipedia
Inorganic Crystal Structure Database. *Inspec. *Medline. *Metals Abstracts/METADEX. *Nucleic Acid Database ...
https://en.wikipedia.org/wiki/Acta_Crystallogr
*  RCSB PDB - 1NR8: The crystal structure of a D-Lysine-based chiral PNA-DNA duplex Literature Report Page
Insights into peptide nucleic acid (PNA) structural features: The crystal structure of a D-lysine-based chiral PNA-DNA duplex ... Nucleic Acid Database. *wwPDB Partners. *RCSB PDB. *PDBe. *PDBj. *BMRB. RCSB PDB (citation) is managed by two members of the ...
http://www.rcsb.org/pdb/explore/litView.do?structureId=1NR8
*  RCSB PDB - 7RAT: EFFECTS OF TEMPERATURE ON PROTEIN STRUCTURE AND DYNAMICS: X-RAY CRYSTALLOGRAPHIC STUDIES OF THE...
Nucleic Acid Database. *wwPDB Partners. *RCSB PDB. *PDBe. *PDBj. *BMRB. RCSB PDB (citation) is managed by two members of the ...
http://www.rcsb.org/pdb/explore/explore.do?structureId=7rat
*  Sequence Similarity - 1PFS: SOLUTION NMR STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN OF THE FILAMENTOUS...
... similarity to other proteins binding to single-stranded nucleic acids. ... Nucleic Acid Database. *wwPDB Partners. *RCSB PDB. *PDBe. *PDBj. *BMRB. RCSB PDB (citation) is managed by two members of the ... The PDBFlex database explores the intrinsic flexibility of protein structures by analyzing structural variations of the same ...
http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1PFS&entity=1&seqid=95
*  RCSB PDB - Protein Feature View - Stress-induced protein 1 - Q20363 (SIP1 CAEEL)
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005). ...
http://www.rcsb.org/pdb/protein/Q20363
*  RCSB PDB - Gene View - BRCA1 - BRCA1, DNA repair associated
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... Nucleic Acid Database. *wwPDB Partners. *RCSB PDB. *PDBe. *PDBj. *BMRB. RCSB PDB (citation) is managed by two members of the ...
http://www.rcsb.org/pdb/gene/BRCA1?chromosome=chr17&range=41228505&v=hg19
*  RCSB PDB - Protein Feature View - Heme oxygenase 1 - P06762 (HMOX1 RAT)
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005). ...
http://www.rcsb.org/pdb/protein/P06762
*  RCSB PDB - Protein Feature View - Regulatory protein PcrH - Q9I325 (Q9I325 PSEAE)
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005). ...
http://www.rcsb.org/pdb/protein/Q9I325
*  RCSB PDB - BMA Ligand Summary Page
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. , PMID:21059682 ...
https://www.rcsb.org/ligand/BMA
*  RCSB PDB - Protein Feature View - Mothers against decapentaplegic homolog 7 - O15105 (SMAD7 HUMAN)
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005). ...
http://www.rcsb.org/pdb/protein/O15105
*  RCSB PDB - Search Results
... nucleic acids, and complex assemblies. As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to ... Nucleic Acid Database. *wwPDB Partners. *RCSB PDB. *PDBe. *PDBj. *BMRB. RCSB PDB (citation) is managed by two members of the ...
http://www.rcsb.org/pdb/results/results.do?qrid=4381674A&tabtoshow=Current