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*  Errors in chromosome segregation during oogenesis and early embryogenesis - WRAP: Warwick Research Archive Portal
Errors in chromosome segregation occurring during human oogenesis and early embryogenesis are very common. Meiotic chromosome ... New insights into human nondisjunction of chromosome 21 in oocytes. PLoS Genet 2008;4(3):e1000033.. 10. Jones KT. Meiosis in ... Munné S, Cohen J. Chromosome abnormalities in human embryos. Hum Reprod Update 1998a;4(6):842-55.. 42. Munné S, Lee A, ... Voullaire L, Slater H, Williamson R, Wilton L. Chromosome analysis of blastomeres from human embryos by using comparative ...
http://wrap.warwick.ac.uk/3796/
*  Avian sex chromosome dimorphism | Biology Letters
The idea of morphological reduction of W is also enhanced by our perspective of the gradual shortening of human Y chromosome [5 ... The avian Z chromosome is remarkably preserved across taxa [4]. Usually, it is 4-6th in size among all the chromosomes and has ... 2006 Comparison of the chicken and zebra finch Z chromosomes shows evolutionary rearrangements. Chromosome Res. 14, 805-815. ... 2008 Molecular cloning of zebra finch W chromosome repetitive sequences: Evolution of the avian W chromosome. Chromosoma 117, ...
http://rsbl.royalsocietypublishing.org/content/8/4/636
*  After 'completion': the changing face of human chromosomes 21 and 22 | Genome Biology | Full Text
... human chromosome sequences the type of research being done on each has shifted subtly, reflecting the impact of genomic data on ... If the number of publications per chromosome is weighted by chromosome size (Figure 1b), chromosomes 21 and 22 (as well as ... Use of comparative physical and sequence mapping to annotate mouse chromosome 16 and human chromosome 21. Genomics. 2001, 74: ... Many more human genes are now covered by at least one of these valuable mRNA resources than when the chromosomes were first ...
https://genomebiology.biomedcentral.com/articles/10.1186/gb-2004-5-7-111
*  Novel RNAs identified from a in-depth analysis of the transcriptome of human chromosomes 21 and 22 - CSHL Scientific Digital...
... exon expressed sequence tag gene expression genetic code genetic identification human human cell human chromosome human genome ... Novel RNAs identified from a in-depth analysis of the transcriptome of human chromosomes 21 and 22 ... genetics oligonucleotide probe tumor cell line tumor gene validation study Cell Line Tumor Chromosome Mapping Chromosomes Human ... Novel RNAs identified from a in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Research, 14 (3). pp ...
http://repository.cshl.edu/25296/
*  Genome-wide estimation of firing efficiencies of origins of DNA replication from time-course copy number variation data | BMC...
We have successfully estimated firing efficiencies of all origins in S.cerevisiae, S.pombe and human chromosomes 21 and 22. ... It is initiated from several hundreds of origins along whole chromosome with different firing efficiencies (or frequency of ... 12859_2010_3704_MOESM2_ESM.PDF Additional file 2: Predicated origins of S.cerevisiae , S.pombe and Human chromosomes 21 and 22 ... This file contains the tables of predicted origins of S.cerevisiae, S.pombe and Human chromosomes 21 and 22. Each table ...
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-11-247
*  Identification of novel target genes by an epigenetic reactivation screen of renal cancer. - Semantic Scholar
Comprehensive analysis of CpG islands in human chromosomes 21 and 22.. *Daiya Takai, Peter A. Jones ... A mouse skin multistage carcinogenesis model reflects the aberrant DNA methylation patterns of human tumors.. *Mario F Fraga, ... A genomic screen for genes upregulated by demethylation and histone deacetylase inhibition in human colorectal cancer. *Hiromu ...
https://www.semanticscholar.org/paper/Identification-of-novel-target-genes-by-an-screen-Caceres-Dulaimi/4b609f05ba4741b3c78106ace0568eb7c91271db
*  Isochore (genetics) - Wikipedia
Häring and Kypr; Kypr, J (2001). "No Isochores in the Human Chromosomes 21 and 22?". Biochemical and Biophysical Research ... 2006). "An isochore map of human chromosomes". Genome Research. 16 (4): 536-541. doi:10.1101/gr.4910606. PMC 1457033 . PMID ... 1985). The human genome, for example, was described as a mosaic of alternating low and high GC content isochores belonging to ... A comprehensive study of the human genome unraveled a genomic organization where two-thirds of the genome is a mixture of many ...
https://en.wikipedia.org/wiki/Isochore_(genetics)
*  CpG site - Wikipedia
Based on an extensive search on the complete sequences of human chromosomes 21 and 22, DNA regions greater than 500 bp were ... Takai D, Jones PA (2002). "Comprehensive analysis of CpG islands in human chromosomes 21 and 22". Proc Natl Acad Sci USA. 99 (6 ... In humans, DNA methylation occurs at the 5 position of the pyrimidine ring of the cytosine residues within CpG sites to form 5- ... About 70% of human promoters have a high CpG content. Given the frequency of GC two-nucleotide sequences, the number of CpG ...
https://en.wikipedia.org/wiki/CpG_site
*  Frontiers | DNA methylation dynamics in muscle development and disease | Frontiers in Aging Neuroscience
Takai, D., and Jones, P. A. (2002). Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc. Natl. Acad. Sci ... Mohandas, T., Sparkes, R. S., and Shapiro, L. J. (1981). Reactivation of an inactive human X chromosome: evidence for X ... Genes Chromosomes Cancer 46, 1028-1038. doi: 10.1002/gcc.20489. Pubmed Abstract , Pubmed Full Text , CrossRef Full Text , ... Ioshikhes, I. P., and Zhang, M. Q. (2000). Large-scale human promoter mapping using CpG islands. Nat. Genet. 26, 61-63. doi: ...
https://www.frontiersin.org/articles/10.3389/fnagi.2015.00019/full
*  IJMS | Free Full-Text | Epigenetic Mechanisms in Penile Carcinoma | HTML
Takai, D.; Jones, P.A. Comprehensive analysis of CPG islands in human chromosomes 21 and 22. Proc. Natl. Acad. Sci. USA 2002, ... Human Epigenetic Enzyme & Modulator Database), which integrates human epigenetic enzymes and their modulators, has been ... Human papillomavirus infection has been reported to have an important role in the development of a subset of PeCa, and its ... Huang, H.; Zhang, B.; Chen, W.; Zhou, S.M.; Zhang, Y.X.; Gao, L.; Xu, Z.G.; Qiao, Y.L.; Tang, P.Z. Human papillomavirus ...
http://mdpi.com/1422-0067/14/6/10791/htm
*  Epigenetic Regulation of Milk Production in Dairy Cows | Springer for Research & Development
Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc Nat Acad Sci. 2002;99(6):3740-5.PubMedGoogle Scholar ... Cell shape regulates global histone acetylation in human mammary epithelial cells. Exp Cell Res. 2007;313(14):3066-75.PubMed ... A distal enhancer region in the human b-casein gene mediates the response to prolactin and glucocorticoid hormones. Gene. 1998; ... 22.. Stelwagen K. Effect of milking frequency on mammary function and shape of the lactation curve. J Dairy Sci. 2001;84(E- ...
https://rd.springer.com/article/10.1007/s10911-010-9164-2
*  Plus it
Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc Natl Acad Sci U S A 2002;99:3740-5. ... The ZNF154 gene is located at chromosome 19q13.43 and encodes a transcription factor belonging to the human zinc finger Krüppel ... than any other chromosome after correction for number of CpG sites (P , 0.0001; Supplementary Fig. S7). Chromosome 21 ... Deletions of chromosome 8p and loss of sFRP1 expression are progression markers of papillary bladder cancer. Lab Invest 2004;84 ...
http://clincancerres.aacrjournals.org/content/17/17/5582
*  Global analysis of DNA methylation in young (J1) and senescent (J2) Gossypium hirsutum L. cotyledons by MeDIP-Seq
Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc Natl Acad Sci U S A. 2002;99: 3740-3745. doi: ... We counted read number stepwise using 10 kb/window on each chromosome and physically visualized the reads on chromosomes with ... An evaluation of new criteria for CpG islands in the human genome as gene markers. Bioinformatics. 2004;20: 1170-1177. doi: ... These reads were widely spread on each chromosome (Fig 2). The read distribution along a gene indicated that young cotyledons ...
http://pubmedcentralcanada.ca/pmcc/articles/PMC5513416/
*  Structural and functional analysis of the human TAF1/DYT3 multiple transcript system, Mammalian Genome | 10.1007/s00335-007...
"Structural and functional analysis of the human TAF1/DYT3 multiple transcript system, Mammalian Genome" on DeepDyve, the ... Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Takai, D; Jones, PA ... Structural and functional analysis of the human TAF1/DYT3 multiple transcript system. Herzfeld, Thilo; Nolte, Dagmar; Müller, ... Structure of the human CCG1 gene: relationship between the exons/introns and functional domain/modules of the protein ...
https://www.deepdyve.com/lp/springer_journal/structural-and-functional-analysis-of-the-human-taf1-dyt3-multiple-Ou5L5ZNSx0
*  "Drenkow J"[Author] - PubMed - NCBI
Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.. Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, ... Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of ... Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. ... Landscape of transcription in human cells.. Djebali S, Davis CA, Merkel A, Dobin A, Lassmann T, Mortazavi A, Tanzer A, Lagarde ...
https://www.ncbi.nlm.nih.gov/pubmed?term=%22Drenkow%20J%22%5BAuthor%5D
*  Prediction of CpG Islands as an Intrinsic Clustering Property Found in Many Eukaryotic DNA Sequences and Its Relation to DNA...
... of all genes in the human genome is overlapped by a CpG island (CGI). CGIs have known functions in the transcription initiation ... Takai D, Jones PA (2002) Comprehensive analysis of CpG islands in human chromosomes 21 and 22. Proc Natl Acad Sci U S A 99:3740 ... The promoter region of around 70% of all genes in the human genome is overlapped by a CpG island (CGI). CGIs have known ... Carpena P, Oliver JL, Hackenberg M et al (2011) High-level organization of isochores into gigantic superstructures in the human ...
https://link.springer.com/protocol/10.1007%2F978-1-4939-7768-0_3
*  CpG site - Wikipedia
Based on an extensive search on the complete sequences of human chromosomes 21 and 22, DNA regions greater than 500 bp were ... "Comprehensive analysis of CpG islands in human chromosomes 21 and 22". Proc Natl Acad Sci USA. 99 (6): 3740-5. doi:10.1073/pnas ... In humans, about 70% of promoters located near the transcription start site of a gene (proximal promoters) contain a CpG island ... In humans, DNA methylation occurs at the 5 position of the pyrimidine ring of the cytosine residues within CpG sites to form 5- ...
https://en.wikipedia.org/wiki/CpG_island
*  Predicting promoters | The Scientist Magazine®
Finding the beginning of genes within genomic sequence presents a formidable challenge to projects to annotate the human genome ... FirstEF gave a similar performance when tested against the finished sequences for human chromosomes 21 and 22. ... Finding the beginning of genes within genomic sequence presents a formidable challenge to projects to annotate the human genome ... Finding the beginning of genes within genomic sequence presents a formidable challenge to projects to annotate the human genome ...
https://www.the-scientist.com/research-round-up/predicting-promoters-53950
*  Emerging Technologies to Study Long Non-coding RNAs | SpringerLink
2004) Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Research, 14 ... 2005). Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. Science, 308, 1149.Google Scholar ... 1991). A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. ... 2003), The transcriptional activity of human Chromosome 22. Genes & Development, 17, 529.Google Scholar ...
https://link.springer.com/chapter/10.1007/978-1-4614-8621-3_7
*  Genomic evidence for non-random endemic populations of decaying exons from mammalian genes
SNPs on human chromosomes 21 and 22 - analysis in terms of protein features and pseudogenes. Pharmacogenomics. 2002;3:393-402. ... Integrated pseudogene annotation for human chromosome 22: evidence for transcription. J Mol Biol. 2005;349:27-45. doi: 10.1016/ ... Molecular fossils in the human genome: identification and analysis of the pseudogenes in chromosomes 21 and 22. Genome research ... We focused on the human genome; therefore, this local gene order test was performed for the human data vs. cow, dog, chimp, ...
http://pubmedcentralcanada.ca/pmcc/articles/PMC2718932/
*  Eukaryotic Pseudogenes
Here is an interactive table, which contains data for all four species: yeast, worm, fruit fly, and human chromosome 21&22. ... fruitfly and human chromosomes 21 and 22. We found that 67 pseudomotif p atterns are over-represented in the fly genome, and 34 ...
http://bioinfo.mbb.yale.edu/genome/pseudogene/motif/
*  Frontiers | A Central Role for Long Non-Coding RNA in Cancer | Genetics
CREB binds to multiple loci on human chromosome 22. Mol. Cell. Biol. 24, 3804-3814. ... Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of ... The chromosome distribution of lncRNAs did not correlate with either protein-coding genes or miRNAs. Kapranov et al. (2010) ... Chen, W., Bocker, W., Brosius, J., and Tiedge, H. (1997). Expression of neural BC200 RNA in human tumours. J. Pathol. 183, 345- ...
https://www.frontiersin.org/articles/10.3389/fgene.2012.00017/full
*  Nkx3-1 and LEF-1 Function as Transcriptional Inhibitors of Estrogen Receptor Activity | Cancer Research
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of ... A novel human prostate-specific, androgen-regulated homeobox gene (NKX3.1) that maps to 8p21, a region frequently deleted in ... Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1. Cell ... A, conservation between the human genome sequence and 15 other species across the ER-binding sites observed in MCF-7 cells ...
http://cancerres.aacrjournals.org/content/68/18/7380?ijkey=750c9d253da56605859ae5bf69c39d629a8c85e6&keytype2=tf_ipsecsha
*  In silico chromosome staining: Reconstruction of Giemsa bands from the whole human genome sequence | PNAS
Compositional maps of human chromosomes revealed that (i) G bands are homogeneous in GC content and essentially consist of GC- ... In silico chromosome staining: Reconstruction of Giemsa bands from the whole human genome sequence. Yoshihito Niimura and ... 1A shows the variation in GC content for human chromosomes 21 and 22, the complete DNA sequences of which are known (16, 17). ... In silico chromosome staining: Reconstruction of Giemsa bands from the whole human genome sequence ...
http://www.pnas.org/content/99/2/797.full
*  Identification of Pax2-regulated genes by expression profiling of the mid-hindbrain organizer region | Development
Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of ... Chan, A. S., Thorner, P. S., Squire, J. A. and Zielenska, M. (2002). Identification of a novel gene NCRMS on chromosome 12q21 ... The PipMaker program (Schwartz et al., 2000) was used to compare the 10 kb upstream regions of the human and mouse Brn1 genes. ... We first searched for conserved sequences within the human and mouse genomic sequences that extend from -20 kb upstream to +15 ...
http://dev.biologists.org/content/132/11/2633