Here we will revise the state-of-the-art LLPS sequence-based predictors, briefly introducing them and explaining which are the ... LLPS often involves sequence regions that have unique functional characteristics, as well as the presence of prion-like and RNA ... Shea, Joan-Emma; Best, Robert B; Mittal, Jeetain (2021-04-01). "Physics-based computational and theoretical approaches to ... trying to understand the relationship between protein sequence properties and the capability to drive LLPS. ...
Outside BASE, align the new sequences to genome or transcript sequences and calculate "intensities" for each gene on the "array ... sequencing-draft-2.txt​ (4.9 KB ) - added by Nicklas Nordborg 13 years ago.. sequencing-update-script-draft-2.txt​ (5.5 KB ) - ... sequencing-biomaterials-4.png​ (97.7 KB ) - added by Nicklas Nordborg 13 years ago.. sequencing-rawdata-4.png​ (73.2 KB ) - ... Handling short read transcript sequence data Reported by:. base. Owned by:. Nicklas Nordborg. ...
Perspective on droplet-based single-cell sequencing David A. Weitz Thought leader David Weitz introduces the Lab on a Chip ... From the themed collection: Droplet-based single-cell sequencing The article was first published on 02 Oct 2017. Lab Chip, 2017 ... From the themed collection: Droplet-based single-cell sequencing The article was first published on 19 Jul 2017. Lab Chip, 2017 ... From the themed collection: Droplet-based single-cell sequencing The article was first published on 19 Jul 2017. Lab Chip, 2017 ...
Sequence-Based Identification of Metronidazole-Resistant Clostridioides difficile Isolates Wiep Klaas Smits. , Céline Harmanus ... Comparison of pCD-METRO open reading frames and phylogenetic analysis in study of sequence-based identification of ... A) Linear maps compare the open reading frames (ORF)1-8 of the pCD-METRO reference sequence (identical to the RT005 plasmid) ... PlasmidFinder and In Silico pMLST: identification and typing of plasmid replicons in whole-genome sequencing (WGS). Methods Mol ...
SummaRuNNer: A Recurrent Neural Network Based Sequence Model for Extractive Summarization of Documents. February 1, 2023. ... SummaRuNNer: A Recurrent Neural Network Based Sequence Model for Extractive Summarization of Documents Proceedings of the AAAI ... SummaRuNNer: A Recurrent Neural Network Based Sequence Model for Extractive Summarization of Documents AAAI 2017, 3075. ... 2017). SummaRuNNer: A Recurrent Neural Network Based Sequence Model for Extractive Summarization of Documents. Proceedings of ...
... J Proteome ... we built a computational model to characterize the kinase sequence specificity toward the substrate target site based on known ... Finally, by combining the sequence recognition model with the quantitative changes in phosphorylation measured in the two drug ...
... provides genomic variation data detected by whole-genome sequencing (WGS) of Japanese individuals. Specifically, the database ... All sequencing libraries were constructed based on PCR-free methods.13 The sequence reads were mapped onto the human reference ... Variant databases for the Japanese population to date have been based on targeted SNP typing6 or whole-exome sequencing.17 ... iJGVD: an integrative Japanese genome variation database based on whole-genome sequencing. *Yumi Yamaguchi-Kabata. 1,2, ...
HaloPlexHS is a high-sensitivity, amplicon-based targeted sequencing method that incorporates molecular barcodes in ... Agilent offers other hybridization-based target enrichment technology options, also, for finding specific regions-of-interest. ... amplicon-based technology for target enrichment and amplification offers an NGS solution with speed, accuracy, and sensitivity ... Amplicon-based Next Generation Sequencing (NGS) Amplicon-based Next Generation Sequencing (NGS) for Library Prep Target ...
UCSF Developing NGS-based Infectious Disease Dx; Tests Metagenomic Sequencing on MinIon Feb 20, 2015 , Monica Heger ... It has developed an in-house bioinformatics pipeline, dubbed SURPI for sequence-based ultra-rapid pathogen identification, ... front-end visualization tools and a web-based interface, and taxonomic classification against all the sequences in GenBank. ... Next-gen sequencing diagnosed histoplasmosis.. Another case was a 20-year-old woman with a fever who had traveled to Australia ...
Erionema (Rutaceae) based on nrDNA sequences. Erin L. Batty, Gareth D. Holmes, Daniel J. Murphy, Paul I. Forster, Will C. Neal ... Erionema (Rutaceae) based on nrDNA sequences," Australian Systematic Botany, 35(4), 326-338, (16 September 2022) Include:. ... Simmons MP, Ochoterena H (2000) Gaps as characters in sequence-based phylogenetic analyses. Systematic Biology 49, 369-381. ... Sequence editing and alignment. Contiguous sequences for each region were assembled and edited using Sequencher (ver. 4.8, Gene ...
This sequence-based physical map will be useful to assemble the genome sequence of pea. Additionally, the 1.1 million WGP tags ... This sequence-based physical map will be useful to assemble the genome sequence of pea. Additionally, the 1.1 million WGP tags ... To address the challenges of accurate assembly of the pea genome (∼4.2 GB of which approximately 85% is repetitive sequences), ... To address the challenges of accurate assembly of the pea genome (~4.2 GB of which approximately 85% is repetitive sequences), ...
Triazine-based Sequence Defined Polymers with Side Chain Diversity and Backbone-Backbone Interaction Motifs ... Nature uses sequence-defined polymers such as polypeptides to create biomaterials, encode information, perform biocatalysis, ... This sequential reactivity provides advancement over prior methods used to form conventional sequence-defined peptide polymers ... acids and amino acid derivatives to form peptidomimetics having amide bonds.Presented here is a new class of synthetic sequence ...
Arnedo-Pac C; Mularoni L; Muiños F; Gonzalez-Perez A; Lopez-Bigas N; Schwartz R | Bioinformatics | 2019
Interface for sequence objects with residue-based meta information ... Since it is dependent on the length of the sequence, it needs to be manipulated after the sequence. The implementation may ... Bio::Seq::MetaI - Interface for sequence objects with residue-based meta information ... Character based meta data is read and set by method meta() and its variants. These are the suffixes and prefixes used in the ...
Posted: Tue Oct 01, 2013 7:44 pm Post subject: Task Sequence based on Variable Value. ... You could check the variable value and send the emails based on the variable value. Create 2 variable monitor tasks: ... hiteksoftware.com Forum Index -> Task Sequences, Chains and Scripts. All times are GMT - 8 Hours. ... Then in your task sequence: step 1 = MoveToDrive step 2 = monitorCopied step 3 = monitorNoFileExists. ...
GitHub - mskilab-org/JaBbA: MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence ... MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data. - ... MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data. ... MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data. ...
Molecular phylogeny of tribe Dipterocarpeae (family Dipterocarpaceae) based on sequence data of chloroplast and nuclear DNA.. ... The sequence data were obtained through direct sequencing of PCR products. The sequencing reactions were performed by using ABI ... The sequences of both strands were obtained and matched together to get exact sequences by using Staden Package (Staden et al ... Molecular phylogeny of tribe Dipterocarpeae (family Dipterocarpaceae) based on sequence data of chloroplast and nuclear DNA. ...
... ... Nanocarriers based on sequence-defined oligomers for tumor-targeted siRNA and miRNA delivery ... Müller, Katharina (2016): Nanocarriers based on sequence-defined oligomers for tumor-targeted siRNA and miRNA delivery. ...
So far, the fastest method based on a sequence-pair required Oðn2 þ 3 Þ time, where is the number of rectilinear blocks. If ... we present a method of rectilinear block packing using selected sequence-pair (SSP), a rectangle packing representation. We ... A fast algorithm for rectilinear block packing based on selected sequence-pair - In this paper, ... So far, the fastest method based on a sequence-pair required Oðn2 þ 3 Þ time, where is the number of rectilinear blocks. If ...
Furthermore, matrix-profile-based path matching method was used for the first time in magnetic sequence-based localization. ... RF-based Wi-Fi and BLE systems are the most popular ones and these have been preferred because of their high distinguishable ... Indoor localization has become a popular topic with the development of location-based services (LBS) and indoor navigation ... Furthermore, matrix-profile-based path matching method was used for the first time in magnetic sequence-based localization. ...
Thermo Fisher Scientific & Pfizer Partner to Expand Localized Access to Next-Generation Sequencing-Based Testing for Cancer ... "In many parts of the world, access to next-generation sequencing may be limited or unaffordable for cancer patients. This ... based testing for lung and breast cancer patients in more than 30 countries across Latin America, Africa, the Middle East and ... based testing for lung and breast cancer patients in more than 30 countries across Latin America, Africa, the Middle East and ...
Con Sequence」 会場 : HLP Galerie, Wesseling ドイツ 日時 : 2018年4月29日 - 6月3日 ... 山野辺英明「Con Sequence」. 会場 : HLP Galerie, Wesseling ドイツ. 日時 : 2018年4月29日 - 6月3日 ... 山野辺英明
How T-lymphoblastic leukemia can be classified based on genetics using standard diagnostic techniques enhanced by whole genome ... leukemia can be classified based on genetics using standard diagnostic techniques enhanced by whole genome sequencing Leukemia ...
... has developed an AI-based mass spectrometric technique capable of determining the monomeric sequence of a polymer. This ... AI-based technique capable of determining the monomeric sequence of a polymer, for plastic recycling. by National Institute for ... AI-based technique capable of determining the monomeric sequence of a polymer, for plastic recycling. ... Citation: AI-based technique capable of determining the monomeric sequence of a polymer, for plastic recycling (2023, June 2) ...
The Forecasting Skill of Physics‐Based Seismicity Models during the 2010-2012 Canterbury, New Zealand, Earthquake Sequence. ... based seismicity models were less informative than empirical models during the aftershock sequence of the 1992 Mw 7.3 Landers, ... Based Seismicity Models during the 2010-2012 Canterbury, New Zealand, Earthquake Sequence. Seismological Research Letters, 89(4 ... based models. Purely physics‐based models have a performance comparable to the ETAS model, and the two coulomb/statistical ...
Next-generation sequencing (NGS) provides an advanced tool for massive genomic sequencing of viruses. However, the isolation of ... Sequence-independent, single-primer amplification (SISPA) NGS was attempted to recover the genomic sequences of HTNV isolates. ... based on the full length of the prototype HTNV 76-118. The whole-genome sequencing of HTNV isolates was accomplished by ... The nucleotide sequence of HTNV S, M, and L segments were covered up to 99.4-100%, 97.5-100%, and 95.6-99.8%, respectively, ...
... amplification-free bait capture enriched sequencing of cDNA is a viable method for generating a SARS-CoV-2 genome sequence and ... All libraries were sequenced using an Illumina MiniSeq with data analyzed using a standardized bioinformatics workflow (SARS- ... Genome sequencing of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is increasingly important to monitor the ... A Comparison of Whole Genome Sequencing of SARS-CoV-2 Using Amplicon-Based Sequencing, Random Hexamers, and Bait Capture by ...
each base has been sequenced 50 times, when 40 samples were loaded. Sequencing was ... we established a sequencing assay based a custom AmpliSeq™ panel to assess the exomic sequences in 72 subjects of Caucasian ... Next-generation sequencing of the human TRPV1 gene and the regulating co-players LTB4R and LTB4R2 based on a custom AmpliSeq™ ... Next-generation sequencing of TRPA1 and TRPV1 genes was based on a custom AmpliSeq library and performed using a validated ...
High-throughput single-cell activity-based screening and sequencing of antibodies using droplet microfluidics. Download Prime ... TY - JOUR T1 - Author Correction: High-throughput single-cell activity-based screening and sequencing of antibodies using ... Author Correction: High-throughput single-cell activity-based screening and sequencing of antibodies using droplet ... "Author Correction: High-throughput Single-cell Activity-based Screening and Sequencing of Antibodies Using Droplet ...
Based on the results, there is ample variation among the inter-population progenies for maximum exploitation of heterosis and ... Based on the results, there is ample variation among the inter-population progenies for maximum exploitation of heterosis and ... and variability was described among 52 oil palm inter-population crosses after two selection cycles using simple sequence ... and variability was described among 52 oil palm inter-population crosses after two selection cycles using simple sequence ...