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*  Category:Amino acid motifs - Wikimedia Commons
Amino Acid Motifs (en); motifs d'acides aminés (fr) Three-dimensional protein structural elements that are composed of a ... Amino Acid Motifs Three-dimensional protein structural elements that are composed of a combination of secondary structures. ... Media in category "Amino acid motifs". The following 52 files are in this category, out of 52 total. ... Retrieved from "https://commons.wikimedia.org/w/index.php?title=Category:Amino_acid_motifs&oldid=333987164" ...
https://commons.wikimedia.org/wiki/Category:Amino_acid_motifs
*  PfEMP1-DBL1α amino acid motifs in severe disease states of Plasmodium falciparum malaria | PNAS
... severe motifs; M, mild motifs; C, cerebral malaria motifs; N, severe malaria NUD motifs; NS, nonsevere malaria NUD motifs; R, ... Specific PfEMP1-DBL1α amino acid motifs correlated with rosetting and severe malaria, with motif location corresponding to ... Amino acids involved in receptor binding are indicated by blue dots, and amino acids essential for binding are represented by ... PfEMP1-DBL1α amino acid motifs in severe disease states of Plasmodium falciparum malaria. Johan Normark, Daniel Nilsson, Ulf ...
http://www.pnas.org/content/104/40/15835
*  A specific amino acid motif of HLA-DRB1 mediates risk and interacts with smoking history in Parkinson's disease | PNAS
A specific amino acid motif of HLA-DRB1 mediates risk and interacts with smoking history in Parkinson's disease. Jill A. ... A specific amino acid motif of HLA-DRB1 mediates risk and interacts with smoking history in Parkinson's disease ... A specific amino acid motif of HLA-DRB1 mediates risk and interacts with smoking history in Parkinson's disease ... A specific amino acid motif of HLA-DRB1 mediates risk and interacts with smoking history in Parkinson's disease ...
https://www.pnas.org/content/116/15/7419
*  YUHSpace: Identification of the amino acid sequence motif of alpha-synuclein responsible for macrophage activation
Identification of the amino acid sequence motif of alpha-synuclein responsible for macrophage activation, doi: 10.1016/j.bbrc. ... YUHSpace: Identification of the amino acid sequence motif of alpha-synuclein responsible for macrophage activation. menu ... Identification of the amino acid sequence motif of alpha-synuclein responsible for macrophage activation ...
https://ir.ymlib.yonsei.ac.kr/handle/22282913/103483
*  Endophytic Life Strategies Decoded by Genome and Transcriptome Analyses of the Mutualistic Root Symbiont Piriformospora indica
Amino acid motifs in P. indica In order to screen the genome of P. indica for known and unknown motifs in the amino acid ... A search for motifs (Table S12 and S13) in the amino acid sequences of these heterogeneous proteins identified a group of 25 ... amino acid permeases, transmembrane amino acid transporter proteins, nucleobase cation symporters, ABC-2 type transporters, and ... 1) Secreted proteins were predicted using TargetP and SignalP as described in material and methods, amino acid motifs in P. ...
http://pubmedcentralcanada.ca/pmcc/articles/PMC3192844/
*  Imperfect interface of Beclin1 coiled-coil domain regulates homodimer and heterodimer formation with Atg14L and UVRAG.
Amino Acid Motifs. Amino Acid Sequence. Apoptosis Regulatory Proteins / metabolism*. Autophagy. Class III Phosphatidylinositol ... Another prominent feature of the Beclin 1 CC structure is the unusually high composition of charged amino acid residues, as ... Beclin 1 self-association is independent of autophagy induction by amino acid deprivation and rapamycin treatment. J. Cell ... are directly involved in Beclin 1-Atg14L interaction because mutating these amino acids to hydrophobic leucine residue nearly ...
http://www.biomedsearch.com/nih/Imperfect-interface-Beclin1-coiled-coil/22314358.html
*  Outline of Clock Genes
About 40 amino acid motif.. BTRC, SLMB. FBXL3. JETLAG. SM00256. IPR001810. WD40. WD-40 repeats is involved in protein-protein ... PAS (PERIOD ARNT SIM)domains were found in proteins involved in sensing for environmental signals.About 100 amino acid motif.. ... 40 amino acid.. BTRC, SLMB. SM00320. IPR001680 LRR. Leucine-rich repeats. Protein-binding. One unit consists of 22~28mino acid. ... About 60 amino acids. The N-terminal basic region (15 aa) is involved in DNA binding. C-terminal HLH involved in dimerization. ...
https://staff.aist.go.jp/s-hanai/clockbase/005_outline.html
*  A survey of machine learning methods for secondary and supersecondary protein structure prediction. - NextBio article
Amino Acid Motifs Artificial Intelligence Computational Biology Models, Molecular Protein Structure, Secondary Proteins ...
http://www.nextbio.com/b/search/article.nb?id=22987348
*  MeSH ORA framework: R/Bioconductor packages to support MeSH over-representation analysis | BMC Bioinformatics | Full Text
Fatty acid oxidation. Cellular amino acid metabolic process (+7). Thioredoxin-disulfide reductase activity ... Nucleic Acids Res. 2009; 37:166-9.View ArticleGoogle Scholar. *. Sartor MA, Ade A, Wright Z, States D, Omenn GS, Athey B, et al ... Nucleic Acids Res. 2008; 37:619-22.View ArticleGoogle Scholar. *. Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, ... Nucleic Acids Res. 2012; 41:64-69.View ArticleGoogle Scholar. *. Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, ...
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0453-z
*  The Hp UreI urea channel hexamera, Ribbon diagram of he | Open-i
Amino Acid Motifs. *Crystallography, X-Ray. *Hydrogen-Ion Concentration. *Models, Molecular. *Protein Multimerization ... The bundle defines a previously unobserved fold comprising a two-helix hairpin motif repeated three times around the central ... The bundle defines a previously unobserved fold comprising a two-helix hairpin motif repeated three times around the central ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC3974264_nihms416126f1&req=4
*  Conceptual and ortholog-based maximum likelihood phylog | Open-i
Amino Acid Motifs. *Biosynthetic Pathways/genetics. *Fungal Proteins/genetics. *Molecular Sequence Annotation ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4117958_12864_2013_6290_Fig2_HTML&req=4
*  Differential expression ofPopulus HsfsandHspsunder diff | Open-i
Amino Acid Motifs. *Chromosome Mapping. *Conserved Sequence. *Gene Duplication. *Gene Expression Profiling ... The gene structure and motif composition are relatively conserved in each subfamily. Microarray and quantitative real-time RT- ... The gene structure and motif composition are relatively conserved in each subfamily. Microarray and quantitative real-time RT- ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4373061_12864_2015_1398_Fig5_HTML&req=4
*  Gene structures and chromosomal locations of human prot | Open-i
Amino Acid Motifs. *Amino Acid Sequence. *Animals. *Catalysis. *Evolution, Molecular. *Farnesyltranstransferase. *Humans ... Farnesyltransferase and geranylgeranyltransferase I both recognize a 'Ca1a2X' motif on their protein substrates; ... Farnesyltransferase and geranylgeranyltransferase I both recognize a 'Ca1a2X' motif on their protein substrates; ... geranylgeranyltransferase II recognizes a different, non-CaaX motif. Each enzyme has two subunits. The genes encoding CaaX ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC154572_gb-2003-4-4-212-1&req=4
*  Akt promotes N-CoR misfolding.A, Relative solubility/in | Open-i
Amino Acid Motifs. *Amino Acid Sequence. *Amino Acid Substitution. *Cell Line, Tumor ... Here, we report that Akt-induced phosphorylation of N-CoR at the consensus Akt motif is crucial for its misfolding and ... Here, we report that Akt-induced phosphorylation of N-CoR at the consensus Akt motif is crucial for its misfolding and ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC3733915_pone.0070891.g003&req=4
*  VMAT2 mutants 507* and DD localize preferentially to im | Open-i
Amino Acid Motifs*. *Biogenic Monoamines/chemistry/metabolism*. *Exocytosis/physiology*. *Glycoproteins*. *Membrane ... The motif thus acts as a signal for retention on LDCVs. In addition, replacement of the serines by glutamate to mimic ... The motif thus acts as a signal for retention on LDCVs. In addition, replacement of the serines by glutamate to mimic ... An acidic motif retains vesicular monoamine transporter 2 on large dense core vesicles. ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC2199206_JCB0011049.f5&req=4
*  MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid...
MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid ... MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs, and amino acid ... sequence motifs, and amino acid composition ...
http://abi.inf.uni-tuebingen.de/Publications/MultiLocGCB/
*  Amphioxus (Branchiostoma floridae) has orthologs of vertebrate odorant receptors | BMC Evolutionary Biology | Full Text
We have also identified highly conserved amino acid motifs that may be important for maintaining receptor conformation or ... we identified three OR-specific amino acid motifs common in cephalochordate, fish and mammalian and ORs. Here, we show that ... By exposing conserved amino acid motifs and testing the ability of those motifs to discriminate between ORs and non-OR GPCRs, ... Key amino acid motifs. To identify amino acid motifs common in vertebrate and B. floridae ORs, we constructed an alignment of ...
https://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2148-9-242
*  Relationships between human BTB/kelch proteins. The ami | Open-i
The amino acid sequences of the 38 full-length human BTB/kelch proteins predicted to contain six-bladed β-prope ... Background: The kelch motif is an ancient and evolutionarily-widespread sequence motif of 44-56 amino acids in length. It ... Background: The kelch motif is an ancient and evolutionarily-widespread sequence motif of 44-56 amino acids in length. It ... The amino acid sequences of the 38 full-length human BTB/kelch proteins predicted to contain six-bladed β-propellers were ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC222960_1471-2105-4-42-2&req=4
*  Functional domains in the known and novel human RFX gen | Open-i
Amino Acid Motifs/genetics. *Animals. *Conserved Sequence/genetics. *Databases, Nucleic Acid. *Gene Duplication ... The motif composition of RFX6 is similar to RFX4, which also has B, C, and D domains but lacks AD. In contrast, we failed to ... The motif composition of RFX6 is similar to RFX4, which also has B, C, and D domains but lacks AD. In contrast, we failed to ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC2533330_1471-2148-8-226-2&req=4
*  A Screen for New Trithorax Group Genes Identified little imaginal discs, the Drosophila melanogaster Homologue of Human...
... a bipartite nuclear localization signal is found at amino acids 1599-1616. Each of these amino acid motifs is found in human ... This domain has a previously described amino acid motif called ARID (AT-rich interaction domain; Herrscheret al. 1995). Among ... Amino acid motifs were determined using the Profilescan program and PsortII programs. Protein alignments were performed on the ... The protein contains a number of amino acid motifs found in both trithorax and Polycomb group genes. It contains an N-terminal ...
http://www.genetics.org/content/156/2/645
*  Effects of recombinant N-terminal proteins on rates of | Open-i
Protein Interaction Domains and Motifs/physiology*. Minor. *Actin Cytoskeleton/genetics/metabolism. *Amino Acid Motifs/genetics ... Mentions: To assess whether the motif or C1 affected rates of force activation in addition to their effects on steady-state ... Mentions: To assess whether the motif or C1 affected rates of force activation in addition to their effects on steady-state ... These results suggest that the C1 domain plus the motif constitute a functional unit of MyBP-C that can activate the thin ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC2571974_jgp1320575f07&req=4
*  Tau GSTs involved in regulation of leaf abscission by comparison the gene profiling of Me GSTs in various abscission-promoting...
The motif lengths with 11 and 50 amino acids long were confirmed by MEME analysis (Fig. 2; Additional file 3: Figure S1). In ... The amino acid motifs and phylogenetic analyses indicated that MeGSTs were divided into 9 classes. The global expression ... Further, the phylogenetic tree and amino acid motifs prediction and analysis were carried out. A globe microarray analysis was ... the TCHQD GST genes have motifs 1, 4, and 6; the GHR GST genes have motifs 4 and 6; the EF1Bγ GST genes have motifs 1, 4, 9, 10 ...
https://link.springer.com/article/10.1186%2Fs12863-018-0627-6
*  Silencing SUMO E2 enzyme Ubc9 represses DENV replicatio | Open-i
Amino Acid Motifs. *Amino Acid Sequence. *Animals. *Cell Line. *Cells, Cultured. *Dengue/genetics/metabolism/virology ... we found that the SUMO acceptor sites are located in the N-terminal domain of NS5 and that a putative SUMO-interacting motif ( ... we found that the SUMO acceptor sites are located in the N-terminal domain of NS5 and that a putative SUMO-interacting motif ( ...
https://openi.nlm.nih.gov/detailedresult.php?img=PMC4836324_zjv9990915840001&req=4