This graph shows the total number of publications written about Pseudomonadaceae by people in this website by year, and whether Pseudomonadaceae was a major or minor topic of these publications ...
Gut microbes are known to play various roles in insects such as digestion of inaccessible nutrients, synthesis of deficient amino acids, and interaction with ecological environments, including host plants. Here, we analyzed the gut microbiome in Hessian fly, a serious pest of wheat. A total of 3,654 high quality sequences of the V3 hypervariable region of the 16S rRNA gene were obtained through 454-pyrosequencing. From these sequences, 311 operational taxonomic units (OTUs) were obtained at the |97% similarity cutoff. In the gut of 1st instar, otu01, a member of Pseudomonas, was predominant, representing 90.2% of total sequences. otu13, an unidentified genus in the Pseudomonadaceae family, represented 1.9% of total sequences. The remaining OTUs were each less than 1%. In the gut of the 2nd instar, otu01 and otu13 decreased to 85.5% and 1.5%, respectively. otu04, a member of Buttiauxella, represented 9.7% of total sequences. The remaining OTUs were each less than 1%. In the gut of the 3rd instar, otu01
A P-value below 0.0001 is the recommended threshold. A larger R-Square valye means a stronger relationship. This is unpublished data using Properitary Artificial Intelligence.. ...
Pseudomonas is a gram-negative rod that belongs to the family Pseudomonadaceae. More than half of all clinical isolates produce the blue-green pigment pyocyanin.
Pseudomonas is a gram-negative rod that belongs to the family Pseudomonadaceae. More than half of all clinical isolates produce the blue-green pigment pyocyanin.
ID Q500S2_PSEU2 Unreviewed; 522 AA. AC Q500S2; DT 07-JUN-2005, integrated into UniProtKB/TrEMBL. DT 07-JUN-2005, sequence version 1. DT 08-MAY-2019, entry version 74. DE SubName: Full=Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter {ECO:0000313,EMBL:AAY35100.1}; GN OrderedLocusNames=Psyr_0026 {ECO:0000313,EMBL:AAY35100.1}; OS Pseudomonas syringae pv. syringae (strain B728a). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae. OX NCBI_TaxID=205918 {ECO:0000313,EMBL:AAY35100.1, ECO:0000313,Proteomes:UP000000426}; RN [1] {ECO:0000313,EMBL:AAY35100.1, ECO:0000313,Proteomes:UP000000426} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=B728a {ECO:0000313,EMBL:AAY35100.1, RC ECO:0000313,Proteomes:UP000000426}; RX PubMed=16043691; DOI=10.1073/pnas.0504930102; RA Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A., RA Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti ...
Lineage: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas ...
Lineage: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas syringae group genomosp. 1; Pseudomonas ...
ID PSSYR1_1_PE575 STANDARD; PRT; 199 AA. AC PSSYR1_1_PE575; Q88A05; DT 00-JAN-0000 (Rel. 1, Created) DT 00-JAN-0000 (Rel. 2, Last sequence update) DT 00-JAN-0000 (Rel. 3, Last annotation update) DE SubName: Full=Anthranilate synthase, component II; (PSSYR1_1.PE575). GN Name=trpG; OrderedLocusNames=PSPTO_0592; OS PSEUDOMONAS SYRINGAE PV. TOMATO STR. DC3000. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=223283; RN [0] RP -.; RG -.; RL -.; CC -!- SEQ. DATA ORIGIN: Translated from the HOGENOM CDS PSSYR1_1.PE575. CC Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome CC sequence. CC -!- ANNOTATIONS ORIGIN:Q88A05_PSESM CC -!- GENE_FAMILY: HOG000025029 [ FAMILY / ALN / TREE ] DR UniProtKB/Swiss-Prot; Q88A05; -. DR EMBL; AE016853; AAO54134.1; -; Genomic_DNA. DR RefSeq; NP_790439.1; NC_004578.1. DR HSSP; Q06129; 1QDL. DR ProteinModelPortal; Q88A05; -. DR GeneID; 1182203; -. DR GenomeReviews; AE016853_GR; PSPTO0592. ...
ID X13776; SV 1; linear; genomic DNA; STD; PRO; 2167 BP. XX AC X13776; M43175; XX DT 19-APR-1989 (Rel. 19, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 24) XX DE Pseudomonas aeruginosa amiC and amiR gene for aliphatic amidase regulation XX KW aliphatic amidase regulator; amiC gene; amiR gene. XX OS Pseudomonas aeruginosa OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1167-2167 RA Rice P.M.; RT ; RL Submitted (16-DEC-1988) to the INSDC. RL Rice P.M., EMBL, Postfach 10-2209, Meyerhofstrasse 1, 6900 Heidelberg, FRG. XX RN [2] RP 1167-2167 RX DOI; 10.1016/0014-5793(89)80249-2. RX PUBMED; 2495988. RA Lowe N., Rice P.M., Drew R.E.; RT Nucleotide sequence of the aliphatic amidase regulator gene (amiR) of RT Pseudomonas aeruginosa; RL FEBS Lett. 246(1-2):39-43(1989). XX RN [3] RP 1-1292 RX PUBMED; 1907262. RA Wilson S., Drew R.; RT Cloning and DNA sequence of amiC, a new gene regulating expression of the RT Pseudomonas ...
Sixty-one extended-spectrum beta-lactamase (ESBL)-producing isolates were collected from Srinagarind Hospital, Thailand. These included 43 Enterobacteriaceae and 18 Pseudomonadaceae. The 43 Enterobacteriaceae were found to produce the following ESBLs: 26 (60.5%) SHV-12, 13 (30.2%) SHV-5, two (4.7%) SHV-2a, one (2.3%) VEB-1 and one (2.3%) unidentified. Twenty-four isolates (55.8%) also carried bla(TEM-1B), as well as bla(SHV) or bla(VEB-1). Plasmid DNA from transconjugants carrying the bla(SHV-12) gene showed various restriction patterns, indicating the distribution of the bla(SHV-12) gene among different antibiotic resistance plasmids. In contrast, bla(SHV-5) in 13 isolates was found on a single plasmid of c. 130 kb. Pulsed-field gel electrophoresis (PFGE) analysis of genomic DNA from these isolates revealed that nine of 11 Klebsiella pneumoniae gave the same pattern, indicating clonal spread of the strain within the hospital, together with the occasional spread of the plasmid to other strains. ...
ID X13776; SV 1; linear; genomic DNA; STD; PRO; 2167 BP. XX AC X13776; M43175; XX DT 19-APR-1989 (Rel. 19, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 24) XX DE Pseudomonas aeruginosa amiC and amiR gene for aliphatic amidase regulation XX KW aliphatic amidase regulator; amiC gene; amiR gene. XX OS Pseudomonas aeruginosa OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1167-2167 RA Rice P.M.; RT ; RL Submitted (16-DEC-1988) to the EMBL/GenBank/DDBJ databases. RL Rice P.M., EMBL, Postfach 10-2209, Meyerhofstrasse 1, 6900 Heidelberg, FRG. XX RN [2] RP 1167-2167 RX DOI; 10.1016/0014-5793(89)80249-2. RX PUBMED; 2495988. RA Lowe N., Rice P.M., Drew R.E.; RT Nucleotide sequence of the aliphatic amidase regulator gene (amiR) of RT Pseudomonas aeruginosa; RL FEBS Lett. 246(1-2):39-43(1989). XX RN [3] RP 1-1292 RX PUBMED; 1907262. RA Wilson S., Drew R.; RT Cloning and DNA sequence of amiC, a new gene regulating expression of ...
ID AMIR_PSEAE Reviewed; 196 AA. AC P10932; DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot. DT 08-DEC-2000, sequence version 2. DT 18-MAY-2010, entry version 81. DE RecName: Full=Aliphatic amidase regulator; GN Name=amiR; OrderedLocusNames=PA3363; OS Pseudomonas aeruginosa. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=287; RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC DNA]. RC STRAIN=PAC433; RX MEDLINE=89211409; PubMed=2495988; DOI=10.1016/0014-5793(89)80249-2; RA Lowe N., Rice P.M., Drew R.E.; RT Nucleotide sequence of the aliphatic amidase regulator gene (amiR) of RT Pseudomonas aeruginosa.; RL FEBS Lett. 246:39-43(1989). RN [2] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; RX MEDLINE=20437337; PubMed=10984043; DOI=10.1038/35023079; RA Stover C.K., Pham X.-Q.T., Erwin A.L., Mizoguchi S.D., Warrener P., RA Hickey M.J., Brinkman F.S.L., Hufnagle W.O., Kowalik D.J., ...
O nome común que se utiliza para Pseudomonas é pseudomonas ou pseudomónadas (variante dalgúns dos casos non nominativos da declinación en grego de monas, monada[8]), aínda que co cambio sufrido nas clasificacións, pseudomónadas pode nalgúns textos referirse, ademais de a Pseudomonas, a outros xéneros da familia Pseudomonadaceae, que antes estaban incluídos no anterior. As pseudomónadas foron clasificadas inicialmente a finais do século XIX cando foron identificadas por Walter Migula. A etimoloxía do nome non foi especificada naquel tempo e apareceu por primeira vez na 7ª edición do Manual de bacterioloxía sistemática de Bergey (a principal autoridade en nomenclatura bacteriana) como procedente do grego pseudes (ψευδες) falso e -monas (μονάς / μονάδα) unha unidade simple, que se pode traducir por falsa unidade; porén, tamén é posible que Migula pretendese denominalas falsa Monas (Monas é un xénero de protista nanoflaxelado[6]). Posteriormente, o ...
Sourangshu Bhattacharya wrote: , Hi, , , Is there a direct way (without reading the protein name from swissprot , and searching in PDB) of getting the PDB id of the protein corresponding , to a particular Swissprot id ? Yes ... SwissProt has a DR (database reference) line that points to the PDB entry (assuming, or course, that there is a solved structure in PDB for that protein). For example, this entry has 3 PDB references. ID AMIC_PSEAE STANDARD; PRT; 384 AA. AC P27017; DT 01-AUG-1992 (Rel. 23, Created) DT 16-OCT-2001 (Rel. 40, Last sequence update) DT 15-JUN-2004 (Rel. 44, Last annotation update) DE Aliphatic amidase expression-regulating protein. GN AMIC OR PA3364. OS Pseudomonas aeruginosa. OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. ..... reference (citation) section skipped ..... CC -!- FUNCTION: Negatively regulates the expression of the aliphatic CC amidase operon. AmiC functions by inhibiting the action of amiR at CC the protein ...
ID A0A0D1M211_PSEPU Unreviewed; 505 AA. AC A0A0D1M211; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 25-OCT-2017, entry version 23. DE RecName: Full=Chromosomal replication initiator protein DnaA {ECO:0000256,HAMAP-Rule:MF_00377, ECO:0000256,RuleBase:RU000577, ECO:0000256,SAAS:SAAS00724181}; GN Name=dnaA {ECO:0000256,HAMAP-Rule:MF_00377}; GN ORFNames=QV12_06100 {ECO:0000313,EMBL:KIU53298.1}; OS Pseudomonas putida (Arthrobacter siderocapsulatus). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=303 {ECO:0000313,EMBL:KIU53298.1, ECO:0000313,Proteomes:UP000032298}; RN [1] {ECO:0000313,EMBL:KIU53298.1, ECO:0000313,Proteomes:UP000032298} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=UASWS0946 {ECO:0000313,EMBL:KIU53298.1, RC ECO:0000313,Proteomes:UP000032298}; RA Crovadore J., Chablais R., Cochard B., Calmin G., Lefort F.; RT Characterization of nitrifying bacteria from sewage ...
ID F2N5S4_PSEU6 Unreviewed; 742 AA. AC F2N5S4; DT 31-MAY-2011, integrated into UniProtKB/TrEMBL. DT 31-MAY-2011, sequence version 1. DT 22-NOV-2017, entry version 30. DE SubName: Full=Idh protein {ECO:0000313,EMBL:AEA84218.1}; GN Name=idh {ECO:0000313,EMBL:AEA84218.1}; GN OrderedLocusNames=PSTAA_2330 {ECO:0000313,EMBL:AEA84218.1}; OS Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. OX NCBI_TaxID=996285 {ECO:0000313,EMBL:AEA84218.1, ECO:0000313,Proteomes:UP000000481}; RN [1] {ECO:0000313,EMBL:AEA84218.1, ECO:0000313,Proteomes:UP000000481} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=DSM 4166 / CMT.9.A {ECO:0000313,Proteomes:UP000000481}; RX PubMed=21515765; DOI=10.1128/JB.05039-11; RA Yu H., Yuan M., Lu W., Yang J., Dai S., Li Q., Yang Z., Dong J., RA Sun L., Deng Z., Zhang W., Chen M., Ping S., Han Y., Zhan Y., Yan Y., RA Jin Q., Lin M.; RT Complete genome sequence of the ...
To identify different microbial populations, microbial DNA was isolated from the stools of 24 patients with end-stage renal disease (ESRD) and 12 healthy persons, and analyzed by phylogenetic microarray. There were marked differences in the abundance of 190 bacterial operational taxonomic units (OTUs) between the ESRD and control groups. OTUs from Brachybacterium, Catenibacterium, Enterobacteriaceae, Halomonadaceae, Moraxellaceae, Nesterenkonia, Polyangiaceae, Pseudomonadaceae, and Thiothrix families were markedly increased in patients with ESRD. To isolate the effect of uremia from inter-individual variations, comorbid conditions, and dietary and medicinal interventions, rats were studied 8 weeks post 5/6 nephrectomy or sham operation. This showed a significant difference in the abundance of 175 bacterial OTUs between the uremic and control animals, most notably as decreases in the Lactobacillaceae and Prevotellaceae families. Thus, uremia profoundly alters the composition of the gut ...
Function: Get / set the tab-delimited file that defines the OTU taxonomic assignemts. The first four columns (out of 12) should be: OTU ID, taxonomic string, E-value, taxonomic ID. For example: 345 k__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Propionibacteriaceae; g__Propionibacterium; s__acnes 5e-138 1042485 95.67 300 13 0 1 300 878 579 346 k__Bacteria; p__Firmicutes; c__Bacilli; o__; f__; g__; s__ 8e-134 1064834 99.59 245 1 0 1 245 909 665 347 k__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__ 2e-103 959954 98.99 198 2 0 103 300 718 521 The taxonomic assignment files generated by QIIME (rep_set_tax_assignments.txt) follow this format. Usage : $summarizer-,taxassign_file(rep_set_tax_assignments.txt); Args : taxonomic assignment file name Returns : taxonomic assignment file ...
Acetobacter tropicalis cyto3, cyto1, cyto2, adhA, adhB genes for cytochrome o ubiquinol oxidase subunit III, cytochrome o ubiquinol oxidase subunit I, cytochrome o ubiquinol oxidase subunit II, hypothetical protein, membrane-bound alcohol dehydrogenase subunit I, membrane-bound alcohol dehydrogenase subunit II, complete cds, strain: NBRC ...
In this study, we demonstrated the role of Mg2+ as a stimulator and also a restoring factor for cell growth of S. yanoikuyae EC-S001. Mg2+ is one of the essential elements for living bacterial cells due to its function as a cofactor of DNA polymerase and ATPase, among others (20). In relation to Mg2+, some additional requirements for certain physiological behaviors of microorganisms are also known. As Nakagawa et al. recently reported, Mg2+ activates the degradation of carbazole by the resting cells of Sphingomonas sp. strain CDH-7 (15). This restoring effect of Mg2+ on certain enzymes associated with xenobiotic metabolism shows that Mg2+ behaves as an activator for Sphingomonas sp. strain CDH-7 in its environmental response and resource utilization. Indeed, Mg2+ is also known as a growth-stimulating factor of submerged mycelia of Streptomyces azureus (18), a role similar to its effect on EC-S001.. In our study, the Mg2+ contents of standard PD medium and NB medium were 1.2 mg/liter (0.05 mM) ...
For the Predefined groups, the R-group definitions specify the enumerable library as User-defined groups. I.e. these groups definitions can be customized. These structures are characteristic to the Homology group and encompass simple and large structures as well.. We have to emphasize, that these definitions are used only for enumeration and do not affect searching. As noted earlier, arbitrary structures fulfilling the requirements for the Homology group will match such a target.. Enumeration definitions contain two attachment points as default. After enumeration these are the atoms which connect to the first two neighbors of the group. If the enumerated Homology groups Pseudo atom has more than two connections, then further attachment points are added. These are put on atoms that have free valence and comply the requirements for externally connecting atoms of the given group. E.g. for aryl only aromatic ring atoms can be the connection points. The atoms of the definition are investigated in ...
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p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.,/p> ,p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.,/p> ,p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).,/p> ,p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x,sup>64,/sup> + x,sup>4,/sup> + x,sup>3,/sup> + x + 1. The algorithm is described in the ISO 3309 standard. ,/p> ,p class=publication>Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.,br /> ,strong>Cyclic redundancy and other checksums,/strong>,br /> ,a href=http://www.nrbook.com/b/bookcpdf.php>Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993),/a>),/p> Checksum:i ...
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A nursery-cultivated cactus species with a large degree of variation. Cacti of this type produce large flowers in a kaleidoscopic range of colours ranging from lemon yellow, to apricot and dark magenta.
Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1 ...
Using interposon mutagenesis, we have generated strains of Pseudomonas aeruginosa which lack or overexpress the substrate-selective OprB porin of this species. A marked decrease or increase in the initial uptake of glucose by these strains verified the role of OprB in facilitating the diffusion of glucose across the outer membrane of P. aeruginosa. However, we also demonstrated that the loss or overexpression of OprB had a similar effect on the uptake of three other sugars able to support the growth of this bacterium (mannitol, glycerol, and fructose). This effect was restricted to carbohydrate transport; arginine uptake was identical in mutant and wild-type strains. These results indicated that OprB cannot be considered strictly a glucose-selective porin; rather, it acts as a central component of carbohydrate transport and is more accurately described as a carbohydrate-selective porin. ...
p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.,/p> ,p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.,/p> ,p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).,/p> ,p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x,sup>64,/sup> + x,sup>4,/sup> + x,sup>3,/sup> + x + 1. The algorithm is described in the ISO 3309 standard. ,/p> ,p class=publication>Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.,br /> ,strong>Cyclic redundancy and other checksums,/strong>,br /> ,a href=http://www.nrbook.com/b/bookcpdf.php>Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993),/a>),/p> Checksum:i ...
A process for the preparation of compound of formula (I A), decahydro-2a,4a,6a,8a-tetraazacyclopent[fg]accnaphthylene and the corresponding functionalized compounds of general formula (I), intermediates for the preparation of 1,4,7,10-tetraazacyclododecane (II A) and corresponding derivatives (II), by preparation of compounds of general formula (III) and subsequent reduction thereof. ##STR1##
Position - Plant your climbing cactus in full sun. If your plant has to be in a partly shaded spot, ensure that the tips are always in the sun so that they can bloom. The cactus needs some support to grow on, unlike most other cactus species. So, plant it next to a fence or … Dragon Fruit Rooted Cuttings - Dark Star Read More »
The membrane-bound alcohol dehydrogenase (ADH) activity of Acetobacter pasteurianus NCI1380 was enhanced more than 10-fold by the addition of ethanol to the medium. In order to elucidate the mechanism of the ethanol induction, a gene cluster encoding the dehydrogenase and cytochrome c subunits of ADH was cloned from this strain, and its nucleotide sequence was determined. Comparison of the deduced amino acid sequences and the NH2-terminal sequences determined with purified proteins showed that the dehydrogenase and cytochrome c subunits contained typical signal peptides of 35 and 26 amino acids, respectively. Transcriptional analysis of the cloned genes by primer extension revealed that the gene cluster was transcribed from two different promoters upstream from the dehydrogenase gene. One (59 bp upstream of the ATG start codon) of the two promoters was used in the presence of ethanol, whereas the other (232 bp upstream of the ATG start codon) was used in the absence of ethanol. Immunoblot ...
Background 5-Ketofructose (5-KF) has recently been identified as a promising non-nutritive natural sweetener. Gluconobacter oxydans strains have been developed that allow efficient production of 5-KF from fructose by plasmid-based expression of the fructose dehydrogenase genes fdhSCL of Gluconobacter japonicus. As plasmid-free strains are preferred for industrial production of food additives, we aimed at the construction of efficient 5-KF production strains with the fdhSCL genes chromosomally integrated.. Results For plasmid-free 5-KF production, we selected four sites in the genome of G. oxydans IK003.1 and inserted the fdhSCL genes under control of the strong P264 promoter into each of these sites. All four recombinant strains expressed fdhSCL and oxidized fructose to 5-KF, but site-specific differences were observed suggesting that the genomic vicinity influenced gene expression. For further improvement, a second copy of the fdhSCL genes under control of P264 was inserted into the second-best ...
This communication presents a morphological study of the changes in ribosome content and organization which occur during the maturation of erythroid cells of th
Buy Acetobacter; pasteurianus; subsp. pasteurianus reference standards from Microorganisms. Available to purchase online at LGC Standards.
23. o-Bromofluorobenzene reacts with lithium amalgam in presence of furan to form 1,4-- epoxy-- 1,4 --dihydronaphthalene. Identify the reaction intermediate in above reaction ...
Taxobox , color = lightgrey , name = Pseudomonas , image = Pseudomonas aeruginosa 01.jpg , image_width = 280px , image_caption = P. aeruginosa colonies on an [[agar plate]]. , regnum = [[Bacterium,Bacteria]] , phylum = [[Proteobacteria]] , classis = [[Proteobacteria,Gamma Proteobacteria]] , ordo = [[Pseudomonadales]] , familia = [[Pseudomonadaceae]] , genus = Pseudomonas , genus_authority = Migula 1894 , type_species = [[Pseudomonas aeruginosa]] , subdivision_ranks = Species , subdivision = P. aeruginosa group :[[Pseudomonas aeruginosa,P. aeruginosa]] :[[Pseudomonas alcaligenes,P. alcaligenes]] :[[Pseudomonas anguilliseptica,P. anguilliseptica]] :[[Pseudomonas argentinensis,P. argentinensis]] :[[Pseudomonas borbori,P. borbori]] :[[Pseudomonas citronellolis,P. citronellolis]] :[[Pseudomonas flavescens,P. flavescens]] :[[Pseudomonas mendocina,P. mendocina]] :[[Pseudomonas nitroreducens,P. nitroreducens]] :[[Pseudomonas ...
Describe the appearance, habitat, etc. of the organism, and why it is important enough to have its genome sequenced. Describe how and where it was isolated. Include a picture or two (with sources) if you can find them. Gluconobacter oxydans, previously known as Acetobacter suboxydans, are Gram-negative rod or oval shaped bacterium ranging from about 0.5 to 0.8mm x to 4.2mm. They tend to have a small genome size because of their limited metabolic abilities. These abilites include partially oxidizing carbohydrates and alcohols through the process of oxidative fermentation, and they can be used for sythesis of Vitamin C, D-gluconis acid and ketogluconic acids. G. oxydans are found in flowers, fruits, garden soil, alcoholic beverages, cider, and soft drinks because they are capable of growing strains in high concentrations of sugar solutions and low pH values (optimal pH for growth is 5.5-6.0.) Although they are able to grow in extreme conditions, its growth rate is slow and the concentration of ...
Peanuts have not one, but two ways to make the amino acid tyrosine, an essential plant and human nutrient. Using X-ray crystallography, scientists discovered a mutated form of a key enzyme plants used to make tyrosine. In cherry tomatoes, the basic canonical form of the enzyme dominates; peanuts can switch hit; and some strains of soybeans have lost the canonical form. The discovery demonstrates that primary metabolism can evolve.. Researchers have tied this major evolutionary change in plant metabolism to a single mutation in the new enzyme. The more recently evolved of the two pathways for making tyrosine is much less constrained than the earlier one, raising the possibility of using it in commercial production of drugs or nutrients at high yields.. ...
Describe any interesting features and/or cell structures; how it gains energy; what important molecules Gluconobacter oxydans has two membranes and no flagella and are thus non-motile. This bacteria usually contains ubiquinone-10 [3]. Since they are aerobes, they must oxidize to get their energy[3]. One method involves oxidation of sugars, aliphatic and cyclic alcohols, and steroids to oxidation product. Another method is through the pentose phosphate pathway where phosphorylation occurs initially then proceeds with oxidation through the pathway. It is suggested that G. oxydans has an incomplete set of tricarboxylic acid cycle (TCA)enzymes because the carbon dioxide produced from glucose was from the pentose phosphate pathway. They possess properties for TCA because they are primarily responsible for the biosynthesis of glutamate, aspartate, and succinate. The main function of G. oxydans is their oxidative capabilites. It uses membrane-bound dehydrogenases to oxidize polyols into ketones and ...
Fluorescent pseudomonads from banana rhizospheric soil were isolated and screened for the production of enzymes and hormones such as phosphatase, indole-3-acetic acid (IAA), 1-aminocyclopropane-1-carboxylate (ACC) deaminase, protease, and antifungal metabolites. Of 95 isolates, 50 (52%) isolates sol …
TY - JOUR. T1 - Reclassification of Pseudomonas fluorescens subsp. cellulosa NCIMB 10462 (Ueda et al. 1952) as Cellvibrio japonicus sp. nov. and revival of Cellvibrio vulgaris sp. nov., nom. rev. and Cellvibrio fulvus sp. nov., nom. rev.. AU - Humphry, David. AU - Black, Gary. AU - Cummings, Stephen. N1 - Principal investigator in research, devised and supervised the experimental work and wrote the paper. This study developed methodologies that are subsequently being applied in the characterisation of a number of clinically significant bacterial isolates.. PY - 2003/1. Y1 - 2003/1. KW - CML. KW - carboxymethyl curdlan (carboxymethyl laminarin). U2 - 10.1099/ijs.0.02271-0. DO - 10.1099/ijs.0.02271-0. M3 - Article. VL - 53. SP - 393. EP - 400. JO - International Journal of Systematic and Evolutionary Microbiology. JF - International Journal of Systematic and Evolutionary Microbiology. SN - 1466-5026. IS - 2. ER - ...
Green fingers and plant enthusiasts will appreciate the Botanic Gardens even more for its fern and cactus properties. A number of fern and cactus species which might be definitely rare and Specific can be found listed here. You can find an aroid walkway, which has about hundreds species of aroids (users of your Araceae family of plants) getting shown. Besides these, you will pay a stop by towards the lily pond which can be a favourite amongst site visitors. With The range of colourful flowering crops from a broad diversity of Malaysia flora seen right here, it is actually no wonder which the Penang Botanic Gardens continues to be chosen since the host for your annual Worldwide Flora Pageant that can take put in Might every year ...
Green fingers and plant enthusiasts will really like the Botanic Gardens even more for its fern and cactus houses. Quite a few fern and cactus species which can be definitely exceptional and Exclusive are available right here. There is certainly an aroid walkway, family hotel in penang which has about hundreds species of aroids (users from the Araceae family of vegetation) currently being shown. Besides these, you can pay a visit for the lily pond which is a favorite among visitors. With the variety of colourful flowering crops from a wide range of Malaysia flora seen right here, it can be No surprise the Penang Botanic Gardens has actually been picked because the host to the once-a-year Worldwide Flora Competition that requires location in May possibly yearly ...
1,2-Dihydro-1,1,6-trimethylnaphthalene, also known as 1,1,6-trimethyl-1,2-dihydro-naphthalene or TDN, belongs to the class of organic compounds known as naphthalenes. Naphthalenes are compounds containing a naphthalene moiety, which consists of two fused benzene rings. 1,2-Dihydro-1,1,6-trimethylnaphthalene is possibly neutral ...
Buy high purity recombinant enzyme endo-1-4-beta-Mannanase Cellvibrio japonicus for use in research, biochemical enzyme assays and in vitro diagnostic analysis.
A composition containing 3,3′-thiobis(propane-1,2-dithiol) and one or more enic compounds which composition is photocurable and can give a cured product having a high refractive index and adequate hardness.
he Jointed Cactus will bring the desert to your party with the realistic cactus print. Our giant 4 ? high cactus is richly printed on both sides on cardstock.
Biotin synthesis in Escherichia coli requires the functions of the bioH and bioC genes to synthesize the precursor pimelate moiety by use of a modified fatty acid biosynthesis pathway. However, it was previously noted that bioH has been replaced with bioG or bioK within the biotin synthetic gene clusters of other bacteria. We report that each of four BioG proteins from diverse bacteria and two cyanobacterial BioK proteins functionally replace E. coli BioH in vivo. Moreover, purified BioG proteins have esterase activity against pimeloyl-ACP methyl ester, the physiological substrate of BioH. Two of the BioG proteins block biotin synthesis when highly expressed and these toxic proteins were shown to have more promiscuous substrate specificities than the non-toxic BioG proteins. A postulated BioG-BioC fusion protein was shown to functionally replace both the BioH and BioC functions of E. coli. Although the BioH, BioG and BioK esterases catalyze a common reaction, the proteins are evolutionarily distinct.
Most cacti possess spines, some large enough to cause serious wounds. Glochids however, though smaller, commonly induce more troublesome, more persistent, dermatological manifestations in humans. Though minute, glochids commonly are barbed and once they have penetrated the skin barbed glochids are practically impossible to dislodge without leaving scraps of foreign material in the wound. Implantation of glochidia in the skin does sometimes cause immediate irritation, but not always, as one may deduce from the presentation of patients with granulomatous lesions around glochidia, patients who have no recollection of the penetration that caused the acute injury, even when it is clear that the injury is far from fresh. Distraction or excitement might cause the victim to overlook brushing past a cactus and picking up a few hundred barely visible glochids. In such cases, the irritant reaction may have a delayed onset. Shanon reported that brushing his axillary skin with sabra fruit resulted in no ...
The microbial degradation of the plant cell wall is a pivotal biological process that is of increasing industrial significance. One of the major plant structural polysaccharides is mannan, a beta-1,4-linked d-mannose polymer, which is hydrolyzed by endo- and exo-acting mannanases. The mechanisms by which the exo-acting enzymes target the chain ends of mannan and how galactose decorations influence activity are poorly understood. Here we report the crystal structure and biochemical properties of CjMan26C, a Cellvibrio japonicus GH26 mannanase. The exo-acting enzyme releases the disaccharide mannobiose from the nonreducing end of mannan and mannooligosaccharides, harnessing four mannose-binding subsites extending from -2 to +2. The structure of CjMan26C is very similar to that of the endo-acting C. japonicus mannanase CjMan26A. The exo-activity displayed by CjMan26C, however, reflects a subtle change in surface topography in which a four-residue extension of surface loop creates a steric block at ...
Citation: Boyd, D.R. et al. (1989) Sterospecific benzylic hydroxylation of bicyclic alkenes by Pseudomonas putida: isolation of (+) R 1 hydroxy 1,2 dihydronaphthalene, an arene hydrate of naphthalene from metabolism of 1,2 dihydronaphthalene. Journal of the Chemical Society: Chemical Communications, 6, pp. 339-340 ...
Gluconobacter suboxydans g5dhA gene for gluconate/polyol dehydrogenase,small subunit and ga5dhB gene for gluconate/polyol dehydrogenase, largesubunit, strain IFO ...
Fingerprint Dive into the research topics of Catalytic performance of a class III Old yellow enzyme and its cysteine variants. Together they form a unique fingerprint. ...
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General Information: Acetobacter aceti IFO 3283, was originally isolated from a pellicle (a kind of biofilm) on the surface of vinegar fermentation. Acetobacter pasteurianus is an acetic acid-producing bacterium commonly found associated with plants and plant products. This organism is used in the production of fermented foods, such as kefir, and vinegar. ...