A 5-carbon keto sugar.
Pentosephosphates are monosaccharides, specifically pentoses, that have a phosphate group attached, playing crucial roles in carbohydrate metabolism, such as being intermediates in the pentose phosphate pathway and serving as precursors for nucleotide synthesis.
Extracts of liver tissue containing uncharacterized specific factors with specific activities; a soluble thermostable fraction of mammalian liver is used in the treatment of pernicious anemia.
Xylose is a monosaccharide, a type of sugar, that is commonly found in woody plants and fruits, and it is used in medical testing to assess the absorptive capacity of the small intestine.
A five-carbon sugar alcohol derived from XYLOSE by reduction of the carbonyl group. It is as sweet as sucrose and used as a noncariogenic sweetener.
A class of carbohydrates that contains five carbon atoms.
Enzymes that catalyze the interconversion of aldose and ketose compounds.
An enzyme of the transferase class that catalyzes the conversion of sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate to D-ribose 5-phosphate and D-xylulose 5-phosphate in the PENTOSE PHOSPHATE PATHWAY. (Dorland, 27th ed) EC 2.2.1.1.
An enzyme that plays a role in the PENTOSES and GLUCURONATES interconversion pathway by catalyzing the oxidation of XYLITOL to D-xylulose. This enzyme has been found to be specific for NAD+.
Fructosephosphates are organic compounds resulting from the combination of fructose with a phosphate group, playing crucial roles in various metabolic processes, particularly within carbohydrate metabolism.
Enzymes that catalyze the epimerization of chiral centers within carbohydrates or their derivatives. EC 5.1.3.
An oxidative decarboxylation process that converts GLUCOSE-6-PHOSPHATE to D-ribose-5-phosphate via 6-phosphogluconate. The pentose product is used in the biosynthesis of NUCLEIC ACIDS. The generated energy is stored in the form of NADPH. This pathway is prominent in tissues which are active in the synthesis of FATTY ACIDS and STEROIDS.
Hexosephosphates are sugar phosphate molecules, specifically those derived from hexoses (six-carbon sugars), such as glucose-6-phosphate and fructose-6-phosphate, which play crucial roles in various metabolic pathways including glycolysis, gluconeogenesis, and the pentose phosphate pathway.
A group of enzymes that transfers a phosphate group onto an alcohol group acceptor. EC 2.7.1.
A primary source of energy for living organisms. It is naturally occurring and is found in fruits and other parts of plants in its free state. It is used therapeutically in fluid and nutrient replacement.

Biosynthesis of terpenoids: YchB protein of Escherichia coli phosphorylates the 2-hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (1/54)

A comparative analysis of all published complete genomes indicated that the putative orthologs of the unannotated ychB gene of Escherichia coli follow the distribution of the dxs, dxr, and ygbP genes, which have been shown to specify enzymes of the deoxyxylulose phosphate pathway of terpenoid biosynthesis, thus suggesting that the hypothetical YchB protein also is involved in that pathway. To test this hypothesis, the E. coli ychB gene was expressed in a homologous host. The recombinant protein was purified to homogeneity and was shown to phosphorylate 4-diphosphocytidyl-2C-methyl-D-erythritol in an ATP-dependent reaction. The reaction product was identified as 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate by NMR experiments with various (13)C-labeled substrate samples. A (14)C-labeled specimen of this compound was converted efficiently into carotenoids by isolated chromoplasts of Capsicum annuum. The sequence of E. coli YchB protein is similar to that of the protein predicted by the tomato cDNA pTOM41 (30% identity), which had been implicated in the conversion of chloroplasts to chromoplasts.  (+info)

Regulation of expression of the yiaKLMNOPQRS operon for carbohydrate utilization in Escherichia coli: involvement of the main transcriptional factors. (2/54)

The yiaKLMNOPQRS (yiaK-S) gene cluster of Escherichia coli is believed to be involved in the utilization of a hitherto unknown carbohydrate which generates the intermediate L-xylulose. Transcription of yiaK-S as a single message from the unique promoter found upstream of yiaK is proven in this study. The 5' end has been located at 60 bp upstream from the ATG. Expression of the yiaK-S operon is controlled in the wild-type strain by a repressor encoded by yiaJ. No inducer molecule of the yiaK-S operon has been identified among over 80 carbohydrate or derivative compounds tested, the system being expressed only in a mutant strain lacking the YiaJ repressor. The lacZ transcriptional fusions in the genetic background of the mutant strain revealed that yiaK-S is modulated by the integration host factor and by the cyclic AMP (cAMP)-cAMP receptor protein (Crp) activator complex. A twofold increase in the induction was observed during anaerobic growth, which was independent of ArcA or Fnr. Gel mobility shift assays showed that the YiaJ repressor binds to a promoter fragment extending from -50 to +121. These studies also showed that the cAMP-Crp complex can bind to two different sites. The lacZ transcriptional fusions of different fragments of the promoter demonstrated that binding of cAMP-Crp to the Crp site 1, centered at -106, is essential for yiaK-S expression. The 5' end of the yiaJ gene was determined, and its promoter region was found to overlap with the divergent yiaK-S promoter. Expression of yiaJ is autogenously regulated and reduced by the binding of Crp-cAMP to the Crp site 1 of the yiaK-S promoter.  (+info)

Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose. (3/54)

Genes yiaP and yiaR of the yiaKLMNOPQRS cluster of Escherichia coli are required for the metabolism of the endogenously formed L-xylulose, whereas yiaS is required for this metabolism only in araD mutants. Like AraD, YiaS was shown to have L-ribulose-5-phosphate 4-epimerase activity. Similarity of YiaR to several 3-epimerases suggested that this protein could catalyze the conversion of L-xylulose-5-phosphate into L-ribulose-5-phosphate, thus completing the pathway between L-xylulose and the general metabolism.  (+info)

Phosphorylation of 1-deoxy-D-xylulose by D-xylulokinase of Escherichia coli. (4/54)

1-deoxy-D-xylulose 5-phosphate serves as a precursor for the biosynthesis of the vitamins thiamine and pyridoxal and for the formation of isopentenyl pyrophosphate and dimethylallyl pyrophosphate via the nonmevalonate pathway of terpenoid biosynthesis. Earlier studies had shown that Escherichia coli incorporates unphosphorylated 1-deoxy-D-xylulose into the terpenoid side chain of ubiquinones with high efficacy. We show that D-xylulokinase of E. coli (EC 2.7.1.17) catalyzes the phosphorylation of 1-deoxy-D-xylulose at the hydroxy group of C-5 at a rate of 1.6 micromol.mg min-1. This reaction constitutes a potential salvage pathway for the generation of 1-deoxy-D-xylulose 5-phosphate from exogenous or endogenous 1-deoxy-D-xylulose as starting material for the biosynthesis of terpenoids, thiamine and pyridoxal.  (+info)

The plastidic pentose phosphate translocator represents a link between the cytosolic and the plastidic pentose phosphate pathways in plants. (5/54)

Plastids are the site of the reductive and the oxidative pentose phosphate pathways, which both generate pentose phosphates as intermediates. A plastidic transporter from Arabidopsis has been identified that is able to transport, in exchange with inorganic phosphate or triose phosphates, xylulose 5-phosphate (Xul-5-P) and, to a lesser extent, also ribulose 5-phosphate, but does not accept ribose 5-phosphate or hexose phosphates as substrates. Under physiological conditions, Xul-5-P would be the preferred substrate. Therefore, the translocator was named Xul-5-P/phosphate translocator (XPT). The XPT shares only approximately 35% to 40% sequence identity with members of both the triose phosphate translocator and the phosphoenolpyruvate/phosphate translocator classes, but a higher identity of approximately 50% to glucose 6-phosphate/phosphate translocators. Therefore, it represents a fourth group of plastidic phosphate translocators. Database analysis revealed that plant cells contain, in addition to enzymes of the oxidative branch of the oxidative pentose phosphate pathway, ribose 5-phosphate isomerase and ribulose 5-phosphate epimerase in both the cytosol and the plastids, whereas the transketolase and transaldolase converting the produced pentose phosphates to triose phosphates and hexose phosphates are probably solely confined to plastids. It is assumed that the XPT function is to provide the plastidic pentose phosphate pathways with cytosolic carbon skeletons in the form of Xul-5-P, especially under conditions of a high demand for intermediates of the cycles.  (+info)

Molecular cloning of XYL3 (D-xylulokinase) from Pichia stipitis and characterization of its physiological function. (6/54)

XYL3, which encodes a D-xylulokinase (EC 2.7.1.17), was isolated from Pichia stipitis CBS 6054 genomic DNA by using primers designed against conserved motifs. Disruption of XYL3 eliminated D-xylulokinase activity, but D-ribulokinase activity was still present. Southern analysis of P. stipitis genomic DNA with XYL3 as a probe confirmed the disruption and did not reveal additional related genes. Disruption of XYL3 stopped ethanol production from xylose, but the resulting mutant still assimilated xylose slowly and formed xylitol and arabinitol. These results indicate that XYL3 is critical for ethanol production from xylose but that P. stipitis has another pathway for xylose assimilation. Expression of XYL3 using its P. stipitis promoter increased Saccharomyces cerevisiae D-xylulose consumption threefold and enabled the transformants to produce ethanol from a mixture of xylose and xylulose, whereas the parental strain only accumulated xylitol. In vitro, D-xylulokinase activity in recombinant S. cerevisiae was sixfold higher with a multicopy than with a single-copy XYL3 plasmid, but ethanol production decreased with increased copy number. These results confirmed the function of XYL3 in S. cerevisiae.  (+info)

Biosynthesis of vitamin B6 in Rhizobium: in vitro synthesis of pyridoxine from 1-deoxy-D-xylulose and 4-hydroxy-L-threonine. (7/54)

Pyridoxine (vitamin B6) in Rhizobium is synthesized from 1-deoxy-D-xylulose and 4-hydroxy-L-threonine. To define the pathway enzymatically, we established an enzyme reaction system with a crude enzyme solution of R. meliloti IFO14782. The enzyme reaction system required NAD+, NADP+, and ATP as coenzymes, and differed from the E. coli enzyme reaction system comprising PdxA and PdxJ proteins, which requires only NAD+ for formation of pyridoxine 5'-phosphate from 1-deoxy-D-xylulose 5-phosphate and 4-(phosphohydroxy)-L-threonine.  (+info)

Contribution of the mevalonate and methylerythritol phosphate pathways to the biosynthesis of gibberellins in Arabidopsis. (8/54)

Gibberellins (GAs) are diterpene plant hormones essential for many developmental processes. Although the GA biosynthesis pathway has been well studied, our knowledge on its early stage is still limited. There are two possible routes for the biosynthesis of isoprenoids leading to GAs, the mevalonate (MVA) pathway in the cytosol and the methylerythritol phosphate (MEP) pathway in plastids. To distinguish these possibilities, metabolites from each isoprenoid pathway were selectively labeled with (13)C in Arabidopsis seedlings. Efficient (13)C-labeling was achieved by blocking the endogenous pathway chemically or genetically during the feed of a (13)C-labeled precursor specific to the MVA or MEP pathways. Gas chromatography-mass spectrometry analyses demonstrated that both MVA and MEP pathways can contribute to the biosyntheses of GAs and campesterol, a cytosolic sterol, in Arabidopsis seedlings. While GAs are predominantly synthesized through the MEP pathway, the MVA pathway plays a major role in the biosynthesis of campesterol. Consistent with some crossover between the two pathways, phenotypic defects caused by the block of the MVA and MEP pathways were partially rescued by exogenous application of the MEP and MVA precursors, respectively. We also provide evidence to suggest that the MVA pathway still contributes to GA biosynthesis when this pathway is limiting.  (+info)

Xylulose is a ketopentose, which is a type of sugar (monosaccharide) with five carbon atoms and a ketone functional group. It is a less common sugar compared to glucose or fructose. Xylulose can be found in small amounts in some fruits and vegetables, and it can also be produced in the human body during the metabolism of certain substances like xylitol, a sugar alcohol used as a sweetener. In the body, xylulose is converted into xylulose-5-phosphate, which plays a role in the pentose phosphate pathway, a metabolic route that generates reducing power (NADPH) for biosynthesis and provides precursors for nucleotide synthesis.

Pentose phosphates are monosaccharides that contain five carbon atoms and one phosphate group. They play a crucial role in various metabolic pathways, including the pentose phosphate pathway (PPP), which is a major source of NADPH and ribose-5-phosphate for the synthesis of nucleotides.

The pentose phosphate pathway involves two main phases: the oxidative phase and the non-oxidative phase. In the oxidative phase, glucose-6-phosphate is converted to ribulose-5-phosphate, producing NADPH and CO2 as byproducts. Ribulose-5-phosphate can then be further metabolized in the non-oxidative phase to produce other pentose phosphates or converted back to glucose-6-phosphate through a series of reactions.

Pentose phosphates are also important intermediates in the synthesis of nucleotides, coenzymes, and other metabolites. Abnormalities in pentose phosphate pathway enzymes can lead to various metabolic disorders, such as defects in erythrocyte function and increased susceptibility to oxidative stress.

Liver extracts are preparations made from animal livers, often from cows or pigs, that contain various nutrients, vitamins, and minerals found in liver tissue. They have been used historically in medicine as a source of nutrition and to treat certain medical conditions.

Liver extracts contain high levels of vitamin B12, iron, and other essential nutrients. They were once commonly prescribed to treat anemia, pernicious anemia (a type of anemia caused by vitamin B12 deficiency), and other conditions related to malnutrition. However, with the advent of more modern treatments and better methods for addressing nutritional deficiencies, liver extracts are less commonly used in modern medicine.

It's important to note that while liver extracts can be a good source of nutrition, they should not be used as a substitute for a balanced diet. Moreover, individuals with certain medical conditions, such as liver disease or hemochromatosis (a condition characterized by excessive iron absorption), should avoid liver extracts or use them only under the supervision of a healthcare provider.

Xylose is a type of sugar that is commonly found in plants and wood. In the context of medical definitions, xylose is often used in tests to assess the function of the small intestine. The most common test is called the "xylose absorption test," which measures the ability of the small intestine to absorb this sugar.

In this test, a patient is given a small amount of xylose to drink, and then several blood and/or urine samples are collected over the next few hours. The amount of xylose that appears in these samples is measured and used to determine how well the small intestine is absorbing nutrients.

Abnormal results on a xylose absorption test can indicate various gastrointestinal disorders, such as malabsorption syndromes, celiac disease, or bacterial overgrowth in the small intestine.

Xylitol is a type of sugar alcohol used as a sugar substitute in various food and dental products. It has a sweet taste similar to sugar but with fewer calories and less impact on blood sugar levels, making it a popular choice for people with diabetes or those looking to reduce their sugar intake. Xylitol is also known to have dental benefits, as it can help prevent tooth decay by reducing the amount of bacteria in the mouth that cause cavities.

Medically speaking, xylitol is classified as a carbohydrate and has a chemical formula of C5H12O5. It occurs naturally in some fruits and vegetables, but most commercial xylitol is produced from corn cobs or other plant materials through a process called hydrogenation. While generally considered safe for human consumption, it can have a laxative effect in large amounts and may be harmful to dogs, so it's important to keep it out of reach of pets.

A pentose is a monosaccharide (simple sugar) that contains five carbon atoms. The name "pentose" comes from the Greek word "pente," meaning five, and "ose," meaning sugar. Pentoses play important roles in various biological processes, such as serving as building blocks for nucleic acids (DNA and RNA) and other biomolecules.

Some common pentoses include:

1. D-Ribose - A naturally occurring pentose found in ribonucleic acid (RNA), certain coenzymes, and energy-carrying molecules like adenosine triphosphate (ATP).
2. D-Deoxyribose - A pentose that lacks a hydroxyl (-OH) group on the 2' carbon atom, making it a key component of deoxyribonucleic acid (DNA).
3. Xylose - A naturally occurring pentose found in various plants and woody materials; it is used as a sweetener and food additive.
4. Arabinose - Another plant-derived pentose, arabinose can be found in various fruits, vegetables, and grains. It has potential applications in the production of biofuels and other bioproducts.
5. Lyxose - A less common pentose that can be found in some polysaccharides and glycoproteins.

Pentoses are typically less sweet than hexoses (six-carbon sugars) like glucose or fructose, but they still contribute to the overall sweetness of many foods and beverages.

Aldose-ketose isomerases are a group of enzymes that catalyze the interconversion between aldoses and ketoses, which are different forms of sugars. These enzymes play an essential role in carbohydrate metabolism by facilitating the reversible conversion of aldoses to ketoses and vice versa.

Aldoses are sugars that contain a carbonyl group (a functional group consisting of a carbon atom double-bonded to an oxygen atom) at the end of the carbon chain, while ketoses have their carbonyl group located in the middle of the chain. The isomerization process catalyzed by aldose-ketose isomerases helps maintain the balance between these two forms of sugars and enables cells to utilize them more efficiently for energy production and other metabolic processes.

There are several types of aldose-ketose isomerases, including:

1. Triose phosphate isomerase (TPI): This enzyme catalyzes the interconversion between dihydroxyacetone phosphate (a ketose) and D-glyceraldehyde 3-phosphate (an aldose), which are both trioses (three-carbon sugars). TPI plays a crucial role in glycolysis, the metabolic pathway that breaks down glucose to produce energy.
2. Xylulose kinase: This enzyme is involved in the pentose phosphate pathway, which is a metabolic route that generates reducing equivalents (NADPH) and pentoses for nucleic acid synthesis. Xylulose kinase catalyzes the conversion of D-xylulose (a ketose) to D-xylulose 5-phosphate, an important intermediate in the pentose phosphate pathway.
3. Ribulose-5-phosphate 3-epimerase: This enzyme is also part of the pentose phosphate pathway and catalyzes the interconversion between D-ribulose 5-phosphate (an aldose) and D-xylulose 5-phosphate (a ketose).
4. Phosphoglucomutase: This enzyme catalyzes the reversible conversion of glucose 1-phosphate (an aldose) to glucose 6-phosphate (an aldose), which is an important intermediate in both glycolysis and gluconeogenesis.
5. Phosphomannomutase: This enzyme catalyzes the reversible conversion of mannose 1-phosphate (a ketose) to mannose 6-phosphate (an aldose), which is involved in the biosynthesis of complex carbohydrates.

These are just a few examples of enzymes that catalyze the interconversion between aldoses and ketoses, highlighting their importance in various metabolic pathways.

Transketolase is an enzyme found in most organisms, from bacteria to humans. It plays a crucial role in the pentose phosphate pathway (PPP), which is a metabolic pathway that runs alongside glycolysis in the cell cytoplasm. The PPP provides an alternative way of generating energy and also serves to provide building blocks for new cellular components, particularly nucleotides.

Transketolase functions by catalyzing the transfer of a two-carbon ketol group from a ketose (a sugar containing a ketone functional group) to an aldose (a sugar containing an aldehyde functional group). This reaction forms a new ketose and an aldose, effectively converting three-carbon sugars into five-carbon sugars, or vice versa.

In humans, transketolase is essential for the production of NADPH, an important reducing agent in the cell, and for the synthesis of certain amino acids and nucleotides. Deficiencies in this enzyme can lead to metabolic disorders such as pentosuria.

D-Xylulose Reductase is an enzyme that catalyzes the reduction of D-xylulose to xylitol using NADPH as a cofactor. This enzyme plays a role in the pentose phosphate pathway, which is a metabolic pathway that supplies reducing energy to cells by maintaining the level of the coenzyme NADPH. D-Xylulose Reductase is also involved in the metabolism of xylose, a type of sugar found in some fruits and vegetables, and is therefore of interest in the development of processes for the conversion of xylose to xylitol, a sweetener used in various food and pharmaceutical applications.

Fructose-1,6-bisphosphate (also known as fructose 1,6-diphosphate or Fru-1,6-BP) is the chemical compound that plays a crucial role in cellular respiration and glucose metabolism. It is not accurate to refer to "fructosephosphates" as a medical term, but fructose-1-phosphate and fructose-1,6-bisphosphate are important fructose phosphates with specific functions in the body.

Fructose-1-phosphate is an intermediate metabolite formed during the breakdown of fructose in the liver, while fructose-1,6-bisphosphate is a key regulator of glycolysis, the process by which glucose is broken down to produce energy in the form of ATP. Fructose-1,6-bisphosphate allosterically regulates the enzyme phosphofructokinase, which is the rate-limiting step in glycolysis, and its levels are tightly controlled to maintain proper glucose metabolism. Dysregulation of fructose metabolism has been implicated in various metabolic disorders, including insulin resistance, type 2 diabetes, and nonalcoholic fatty liver disease (NAFLD).

Carbohydrate epimerases are a group of enzymes that catalyze the interconversion of specific stereoisomers (epimers) of carbohydrates by the reversible oxidation and reduction of carbon atoms, usually at the fourth or fifth position. These enzymes play important roles in the biosynthesis and modification of various carbohydrate-containing molecules, such as glycoproteins, proteoglycans, and glycolipids, which are involved in numerous biological processes including cell recognition, signaling, and adhesion.

The reaction catalyzed by carbohydrate epimerases involves the transfer of a hydrogen atom and a proton between two adjacent carbon atoms, leading to the formation of new stereochemical configurations at these positions. This process can result in the conversion of one epimer into another, thereby expanding the structural diversity of carbohydrates and their derivatives.

Carbohydrate epimerases are classified based on the type of substrate they act upon and the specific stereochemical changes they induce. Some examples include UDP-glucose 4-epimerase, which interconverts UDP-glucose and UDP-galactose; UDP-N-acetylglucosamine 2-epimerase, which converts UDP-N-acetylglucosamine to UDP-N-acetylmannosamine; and GDP-fucose synthase, which catalyzes the conversion of GDP-mannose to GDP-fucose.

Understanding the function and regulation of carbohydrate epimerases is crucial for elucidating their roles in various biological processes and developing strategies for targeting them in therapeutic interventions.

The Pentose Phosphate Pathway (also known as the Hexose Monophosphate Shunt or HMP Shunt) is a metabolic pathway that runs parallel to glycolysis. It serves two major functions:

1. Providing reducing equivalents in the form of NADPH for reductive biosynthesis and detoxification processes.
2. Generating ribose-5-phosphate, a pentose sugar used in the synthesis of nucleotides and nucleic acids (DNA and RNA).

This pathway begins with the oxidation of glucose-6-phosphate to form 6-phosphogluconolactone, catalyzed by the enzyme glucose-6-phosphate dehydrogenase. The resulting NADPH is used in various anabolic reactions and antioxidant defense systems.

The Pentose Phosphate Pathway also includes a series of reactions called the non-oxidative branch, which interconverts various sugars to meet cellular needs for different types of monosaccharides. These conversions are facilitated by several enzymes including transketolase and transaldolase.

Hexose phosphates are organic compounds that consist of a hexose sugar molecule (a monosaccharide containing six carbon atoms, such as glucose or fructose) that has been phosphorylated, meaning that a phosphate group has been added to it. This process is typically facilitated by enzymes called kinases, which transfer a phosphate group from a donor molecule (usually ATP) to the sugar molecule.

Hexose phosphates play important roles in various metabolic pathways, including glycolysis, gluconeogenesis, and the pentose phosphate pathway. For example, glucose-6-phosphate is a key intermediate in both glycolysis and gluconeogenesis, while fructose-6-phosphate and fructose-1,6-bisphosphate are important intermediates in glycolysis. The pentose phosphate pathway, which is involved in the production of NADPH and ribose-5-phosphate, begins with the conversion of glucose-6-phosphate to 6-phosphogluconolactone by the enzyme glucose-6-phosphate dehydrogenase.

Overall, hexose phosphates are important metabolic intermediates that help regulate energy production and utilization in cells.

Glucose is a simple monosaccharide (or single sugar) that serves as the primary source of energy for living organisms. It's a fundamental molecule in biology, often referred to as "dextrose" or "grape sugar." Glucose has the molecular formula C6H12O6 and is vital to the functioning of cells, especially those in the brain and nervous system.

In the body, glucose is derived from the digestion of carbohydrates in food, and it's transported around the body via the bloodstream to cells where it can be used for energy. Cells convert glucose into a usable form through a process called cellular respiration, which involves a series of metabolic reactions that generate adenosine triphosphate (ATP)—the main currency of energy in cells.

Glucose is also stored in the liver and muscles as glycogen, a polysaccharide (multiple sugar) that can be broken down back into glucose when needed for energy between meals or during physical activity. Maintaining appropriate blood glucose levels is crucial for overall health, and imbalances can lead to conditions such as diabetes mellitus.

L-Xylulose accumulates in the urine in patients with pentosuria, due to a deficiency in L-xylulose reductase. Since L-xylulose ... Xylulose is a ketopentose, a monosaccharide containing five carbon atoms, and including a ketone functional group. It has the ... Data is for L-xylulose. Merck Index, 11th Edition, 9996. Winkelhausen, Eleonora; Kuzmanova, Slobodanka (1998). "Microbial ...
L-xylulose + NADPH + H+ Thus, the two substrates of this enzyme are xylitol and NADP+, whereas its 3 products are L-xylulose, ... Dicarbonyl/L-xylulose reductase, also known as carbonyl reductase II, is an enzyme that in human is encoded by the DCXR gene ... L-xylulose+reductase at the U.S. National Library of Medicine Medical Subject Headings (MeSH) Portal: Biology v t e (Articles ... Xylulose Xylitol (Note conversion of ketone to alcohol) This enzyme belongs to the superfamily of short-chain oxidoreductases, ...
D-Xylulose 5-phosphate (D-xylulose-5-P) is an intermediate in the pentose phosphate pathway. It is a ketose sugar formed from ... "Xylulose 5-phosphate mediates glucose-induced lipogenesis by xylulose 5-phosphate-activated protein phosphatase in rat liver". ... Xylulose-5-phosphate also plays a crucial role in the regulation of glycolysis through its interaction with the bifunctional ... In the non-oxidative branch of the pentose phosphate pathway, xylulose-5-phosphate acts as a donor of two-carbon ketone groups ...
D-xylulose + NADH + H+ Thus, the two substrates of this enzyme are xylitol and NAD+, whereas its 3 products are D-xylulose, ... The systematic name of this enzyme class is xylitol:NAD+ 2-oxidoreductase (D-xylulose-forming). Other names in common use ... In enzymology, a D-xylulose reductase (EC 1.1.1.9) is an enzyme that catalyzes the chemical reaction xylitol + NAD+ ⇌ {\ ... Hickman J; Ashwell G (1959). "A sensitive and stereospecific enzymatic assay for xylulose". J. Biol. Chem. 234: 758-761. PMID ...
In enzymology, a 1-deoxy-d-xylulose-5-phosphate synthase (EC 2.2.1.7) is an enzyme in the non-mevalonate pathway that catalyzes ... Kuzuyama T, Takagi M, Takahashi S, Seto H (2000). "Cloning and characterization of 1-deoxy-D-xylulose 5-phosphate synthase from ... 1-deoxy-d-xylulose 5-phosphate + CO2 Thus, the two substrates of this enzyme are pyruvate and d-glyceraldehyde 3-phosphate, ... whereas its two products are 1-deoxy-d-xylulose 5-phosphate and CO2. This enzyme belongs to the family of transferases, ...
I. Enzymic formation of xylulose in liver". J. Biochem. 47: 741-754. Portal: Biology v t e (EC 4.1.1, Enzymes of unknown ...
D-xylulose is then phosphorylated to D-xylulose-5-phosphate as in the oxido-reductase pathway. At equilibrium, the isomerase ... Xylitol is then oxidized to D-xylulose by XDH, using the cofactor NAD. In the last step D-xylulose is phosphorylated by an ATP ... D-xylulose because the conversion of xylose to xylulose is energetically unfavorable. The Weimberg pathway is an oxidative ... XR catalyze the formation of xylitol from D-xylose and XDH the formation of D-xylulose from xylitol. Saccharomyces cerevisiae ...
... d-Ribulose is the diastereomer of d-xylulose. Ribulose sugars are composed in the pentose phosphate pathway from arabinose. ...
In enzymology, a xylose isomerase (EC 5.3.1.5) is an enzyme that catalyzes the interconversion of D-xylose and D-xylulose. This ... Twenty hexoses and nine pentoses, including xylulose, were considered to be "rare sugars". Hence D-xylose isomerase is used to ... Mitsuhashi, S.; Lampen, J. (1953). "Conversion of D-xylose to D-xylulose in extracts of Lactobacillus pentosus" (PDF). Journal ... Hochster RM, Watson RW (1954). "Enzymatic isomerization of D-xylose to D-xylulose". Arch. Biochem. Biophys. 48 (1): 120-9. doi: ...
... and L-xylulose kinase EC 2.7.1.53 (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. These enzymes ...
I. The cleavage of xylulose 5-phosphate by phosphoketolase". J. Biol. Chem. 231 (2): 1009-29. PMID 13539033. Schramm M, Klybas ... The enzyme phosphoketolase(EC 4.1.2.9) catalyzes the chemical reactions D-xylulose 5-phosphate + phosphate ⇌ {\displaystyle \ ... Glenn, Katie; Smith, Kerry S. (2015-01-20). "Allosteric Regulation of Lactobacillus plantarum Xylulose 5-Phosphate/Fructose 6- ...
Ribulose and xylulose occur in the pentose phosphate pathway. Galactose, a component of milk sugar lactose, is found in ...
... which transforms xylitol to D-xylulose. Specific xylulokinase phosphorylates it to D-xylulose-5-phosphate. This then goes to ... Food portal Medicine portal Aspartame Birch sap L-Xylulose reductase Xylonic acid Safety data sheet for xylitol Archived 3 ...
It is associated with a deficiency of L-xylulose reductase, necessary for xylitol metabolism. L-Xylulose is a reducing sugar, ... L-xylulose reductase, contained in red blood cells, is composed of both a major and minor isozyme. For those diagnosed with ... Lane, A.B. (February 1984). "On the Nature of L-Xylulose Reductase Deficiency in Essential Pentosuria". Biochemical Genetics. ...
DHA synthase acts as a transferase (transketolase) to transfer part of xylulose 5-phosphate to DHA. Then these 3 molecules of ... The other 2 molecules are used to regenerate xylulose 5-phosphate. As key players in the carbon cycle, methylotrophs work to ... This pathway assimilates three molecules of formaldehyde into 1 molecule of DHAP using 3 molecules of xylulose 5-phosphate as ... The dihydroxyacetone (DHA) pathway, also known as the xylulose monophosphate (XuMP) pathway, is found exclusively in yeast. ...
D-xylulose 5-phosphate Thus, the two substrates of this enzyme are ATP and D-xylulose, whereas its two products are ADP and D- ... In enzymology, a xylulokinase (EC 2.7.1.17) is an enzyme that catalyzes the chemical reaction ATP + D-xylulose ⇌ ADP + ... The systematic name of this enzyme class is ATP:D-xylulose 5-phosphotransferase. Other names in common use include xylulokinase ... Stumpf PK, Horecker BL (February 1956). "The role of xylulose 5-phosphate in xylose metabolism of Lactobacillus pentosus". The ...
This was accomplished via overexpressing heterologous xylulose kinase and endogenous xylose isomerase. A European patent has ...
Lichtenthaler HK (June 1999). "The 1-Deoxy-D-Xylulose-5-Phosphate Pathway of Isoprenoid Biosynthesis in Plants". Annual Review ...
L-xylulose 5-phosphate Thus, the two substrates of this enzyme are ATP and L-xylulose, whereas its two products are ADP and L- ... The systematic name of this enzyme class is ATP:L-xylulose 5-phosphotransferase. This enzyme is also called L-xylulokinase ( ... In enzymology, a L-xylulokinase (EC 2.7.1.53) is an enzyme that catalyzes the chemical reaction ATP + L-xylulose ⇌ {\ ... xylulose 5-phosphate. This enzyme belongs to the family of transferases, specifically those transferring phosphorus-containing ...
Isolation of beta-keto-L-gluconic acid, an intermediate in L-xylulose biosynthesis". J. Biol. Chem. 236: 2975-2980. Scott DBM; ...
His doctoral thesis was about the metabolism of glucuronic acid, ribitol, and xylulose. He then completed a postdoctoral ...
Lichtenthaler HK (June 1999). "The 1-deoxy-d-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants". Annual Review ...
Lichtenthaler HK (June 1999). "The 1-dideoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants". Annual ...
Isolation of beta-keto-L-gluconic acid, an intermediate in L-xylulose biosynthesis". J. Biol. Chem. 236: 357-364. Portal: ...
The 1-deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants. Annu. Rev. Plant Physiol. PlantMol. Biol. 50, ...
Lichtenthaler H (1999). "The 1-Deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants". Annu Rev Plant ... pathway-also appearing as the mevalonate-independent pathway and the 2-C-methyl-D-erythritol 4-phosphate/1-deoxy-D-xylulose 5- ...
The systematic name of this enzyme class is 3-dehydro-L-gulonate carboxy-lyase (L-xylulose-forming). This enzyme participates ... Isolation of beta-keto-L-gluconic acid, an intermediate in L-xylulose biosynthesis". J. Biol. Chem. 236: 357-364. Portal: ... L-xylulose + CO2 This enzyme belongs to the family of lyases, specifically the carboxy-lyases, which cleave carbon-carbon bonds ...
Isoprenoids can be synthesized through mevalonate or 1-deoxy-D-xylulose 5-phosphate pathways. Isoprenogenesis significantly ...
In enzymology, a formaldehyde transketolase (EC 2.2.1.3) is an enzyme that catalyzes the chemical reaction D-xylulose 5- ... the two substrates of this enzyme are D-xylulose 5-phosphate and formaldehyde, whereas its two products are glyceraldehyde 3- ... The systematic name of this enzyme class is D-xylulose-5-phosphate:formaldehyde glycolaldehydetransferase. This enzyme is also ...
"The L-xylulose-xylitol enzyme and other polyol dehydrogenases of guinea pig liver mitochondria". The Journal of Biological ...
L-Xylulose accumulates in the urine in patients with pentosuria, due to a deficiency in L-xylulose reductase. Since L-xylulose ... Xylulose is a ketopentose, a monosaccharide containing five carbon atoms, and including a ketone functional group. It has the ... Data is for L-xylulose. Merck Index, 11th Edition, 9996. Winkelhausen, Eleonora; Kuzmanova, Slobodanka (1998). "Microbial ...
CAS 2080295-99-2. Molecular Weight 230.11 (free acid basis). Browse <SC>D</SC>-Xylulose 5-phosphate lithium salt ... lt;SC>D</SC>-Xylulose 5-phosphate lithium salt. ...
D-xylulose forming (NADP ) activity pathways, according to their Panther/Gene Ontology Classification ...
... is a highly conserved and phylogenetically widespread enzyme converting L-xylulose into xylitol. It also reduces highly ... Dicarbonyl/L-xylulose reductase (DCXR) is a highly conserved and phylogenetically widespread enzyme converting L-xylulose into ... Dicarbonyl/l-xylulose reductase (DCXR): The multifunctional pentosuria enzyme Sun-Kyung Lee 1 , Le Tho Son, Hee-Jung Choi, ... Dicarbonyl/l-xylulose reductase (DCXR): The multifunctional pentosuria enzyme Sun-Kyung Lee et al. Int J Biochem Cell Biol. ...
Further experiments showed xylulose transport through the HXT family of non-specific glucose transporters. A genome scale flux ... Xylulose phosphorylation by xylulokinase was identified as limiting in wild type Saccharomyces cerevisiae, but transport became ... A dynamic flux balance model and bottleneck identification of glucose, xylose, xylulose co-fermentation in Saccharomyces ... A dynamic flux balance model and bottleneck identification of glucose, xylose, xylulose co-fermentation in Saccharomyces ...
Mechanistic studies on enzymes of secondary metabolism : 5-fluoro-5-deoxyadenosine synthase and 1-deoxy-D-xylulose-5- ... mevalonate pathway to isopentenyl diphosphate and dimethylallyl diphosphate that catalyses the conversion of 1-deoxy-D-xylulose ...
E. coli recombinant L-xylulose kinase from E.coli E.C. No.: 2.7.1.53 Purity: min 95% by SDS-PAGE ... One unit is defined as the amount of enzyme that catalyzes the formation of 1 μmol L-xylulose 5- phosphate from L-xylulose and ... E. coli recombinant L-xylulose kinase from E.coli E.C. No.: 2.7.1.53. CAS: 37278-01-6. CAzy: MW: kDa. Purity: min 95% by SDS- ...
Xylulose 5-phosphate phosphoketolase from Lactococcus lactis
Recombinant Human L-Xylulose Reductase is produced by our E.coli expression system and the target gene encoding Met1-Cys244 is ...
GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity (Molecular function). Catalysis of the reaction: D-glyceraldehyde ... 3-phosphate + H+ + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2. [EC:2.2.1.7, RHEA:12605] ...
2 Enhancing the supply of xylulose 5-phosphate and NADPH in faa1Δ strain.. a, Scheme of the rational design for the enhancement ...
Essential pentosuria is a condition characterized by high levels of a sugar called L-xylulose in urine. Explore symptoms, ... One of its functions is to perform a chemical reaction that converts a sugar called L-xylulose to a molecule called xylitol. ... Essential pentosuria is a condition characterized by high levels of a sugar called L-xylulose in urine. The condition is so ... Lee SK, Son le T, Choi HJ, Ahnn J. Dicarbonyl/l-xylulose reductase (DCXR): The multifunctional pentosuria enzyme. Int J Biochem ...
1-deoxy-D-xylulose 5-phosphate reductoisomerase: AB. SMTL:PDB. SMTL Chain Id:. PDB Chain Id:. A. A ...
DCXR: dicarbonyl and L-xylulose reductase. *DDC: dopa decarboxylase. *DDX11: DEAD/H-box helicase 11 ...
Etude de linhibition de la 1-déoxy-D-xylulose-5-phosphate réductoisomérase (DXR). *POUYEZ, Jenny (PI) ...
1-Deoxy-d-Xylulose 5-phosphate Reductoisomerase (DXR) is an important rate-limiting enzyme in 2-C-Methyl-d-Erythritol 4- ... 1-Deoxy-d-Xylulose 5-phosphate Reductoisomerase (DXR) is an important rate-limiting enzyme in 2-C-Methyl-d-Erythritol 4- ... Mehmandoust Rad M, Abdossi V, Moradi P, Rakhshandehroo F, Mehrafarin A. Expression Analysis of Gene Encoding 1-Deoxy-d-Xylulose ... Expression Analysis of Gene Encoding 1-Deoxy-d-Xylulose 5-Phosphate Reductoisomerase (DXR) and Cardenolide and Digitoxin ...
The pentose excreted in this condition is xylulose.. Sex. No sex predilection has been reported; the known inherited disorders ...
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sex00053 sex01100 sex01120]. M00854 Glycogen biosynthesis, ...
Diacetyl/l-Xylulose Reductase Mediates Chemical Redox Cycling in Lung Epithelial Cells. Chem Res Toxicol. 2017 Jul 17;30(7): ...
M00344 Formaldehyde assimilation, xylulose monophosphate pathway * M00378 F420 biosynthesis, archaea * M00422 Acetyl-CoA ...
xylulose-5-phosphate. Metabolite. chebi:16332. sedoheptulose-1,7-bisphosphate. Metabolite. chebi:17969. ...
L-xylulose reductase. -. 1.1.1.100. 3-oxoacyl-[acyl-carrier-protein] reductase. -. 1.1.1.101. acylglycerone-phosphate reductase ...
PDB Compounds: (D:) 1-deoxy-D-xylulose 5-phosphate reductoisomerase. SCOPe Domain Sequences for d1r0kd2:. Sequence; same for ... Protein 1-deoxy-D-xylulose-5-phosphate reductoisomerase [69410] (2 species). *. Species Zymomonas mobilis [TaxId:542] [110420 ... d1r0kd2 c.2.1.3 (D:3-126,D:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} ... PDB Description: crystal structure of 1-deoxy-d-xylulose 5-phosphate reductoisomerase from zymomonas mobilis ...
Preliminary X-ray crystallographic analysis of the D-xylulose 5-phosphate phosphoketolase from Lactococcus lactis. Petrareanu G ... In this study we report the crystal structures of xylulose 5-phosphate/fructose 6-phosphate phosphoketolase from ... they are phosphorolytic cleavage of fructose 6-phosphate or xylulose 5-phosphate to produce aldose phosphate, acetyl phosphate ...
L-xylulose 5-phosphate(2-) lipoate + lipoic acid + malate(2-) + malic acid + ...
Inhibition of Deoxy-D-Xylulose Phosphate Synthase (F4/13). Inhibition of Microtubule Assembly (K1/3). Inhibition of Microtubule ...
  • L-Xylulose accumulates in the urine in patients with pentosuria, due to a deficiency in L-xylulose reductase. (wikipedia.org)
  • ??????????? : Homo sapiens dicarbonyl/L-xylulose reductase (DCXR), transcript variant 1. (ld.ru)
  • The second group inhibits deoxy-D-xylulose phosphate synthase (DOXP), a key component to plastid isoprenoid synthesis. (ufl.edu)
  • Xylulose is a ketopentose, a monosaccharide containing five carbon atoms, and including a ketone functional group. (wikipedia.org)
  • D-xylulose is a monosaccharide containing five carbon atoms. (foodcomex.org)
  • D-xylulose is converted from xylitol by the enzyme NAD+-linked xylitol dehydrogenase (EC 1.1.1.9) in the glucuronate pathway, the most important xylitol-handling metabolic pathway in mammals. (foodcomex.org)
  • 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Dxr) is an essential enzyme in the viability of many bacteria and catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (Dxp) to 2-C-methylerythritol 4-phosphate (MEP) within the MEP pathway found in plants and bacteria. (sc.edu)
  • 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway. (phytoab.com)
  • 1-Deoxy-D-xylulose-5-phosphate is used as a substrate for the identification, differentiation and characterization of procaryotic 1-Deoxy-D-xylulose-5-phosphate reductoisomerase(s) (Dxr) which catalyze the first committed step of the nonmevalonate pathway (NMP) for isoprenoid biosynthesis. (sigmaaldrich.com)
  • A combination of batch fermentations and genome scale flux balance analysis were used to identify and quantify the rate limiting reactions in the xylulose transport and utilization pathway. (oregonstate.edu)
  • 1-Deoxy-D-xylulose 5-phosphate reductoisomerase (DXR) is a key enzyme of the pathway that catalyzes the rearrangement and nicotinamide adenine dinucleotide phosphate (NADPH)-dependent reduction of 1-deoxy-D-xylulose 5-phosphate (DXP) to MEP. (unboundmedicine.com)
  • Since L-xylulose is a reducing sugar like D-glucose, pentosuria patients have been wrongly diagnosed in the past to be diabetic. (wikipedia.org)
  • Further experiments showed xylulose transport through the HXT family of non-specific glucose transporters. (oregonstate.edu)
  • Most likely, D-xylulose (as well as D-arabinose or D-ribulose) is a precursor of the pentiol D-arabitol, since pentitols are derived from their corresponding pentose phosphate precursors via pentoses. (foodcomex.org)
  • By an acyloin condensation of pyruvate with glyceraldehyde 3-phosphate, it produces 1-deoxy-D-xylulose 5-phosphate, a precursor of thiamine diphosphate (TPP), pyridoxal phosphate, and the isoprenoid building block isopentenyl diphosphate (IPP). (nih.gov)
  • Model predictions closely matched experimental xylulose utilization rates suggesting the combination of transport and xylulokinase constraints is sufficient to explain xylulose utilization limitation in S. cerevisiae. (oregonstate.edu)
  • Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. (nih.gov)
  • This proposal centers on studies of the microbial metabolic enzyme 1-deoxy-D-xylulose 5-phosphate synthase (DXPS). (hhs.gov)
  • A dynamic flux balance model and bottleneck identification of glucose, xylose, xylulose co-fermentation in Saccharomyces cerevisiae. (oregonstate.edu)
  • They act in a pathway to convert xylose into xylitol, xylulose, and xylulose-5-phosphate, before eventually producing ethanol. (nih.gov)
  • they are phosphorolytic cleavage of fructose 6-phosphate or xylulose 5-phosphate to produce aldose phosphate, acetyl phosphate, and H(2)O. The phosphoketolase reaction is different from other well studied ThDP-dependent enzymes because it involves a dehydration step. (nih.gov)
  • In this study we report the crystal structures of xylulose 5-phosphate/fructose 6-phosphate phosphoketolase from Bifidobacterium breve. (nih.gov)
  • One of its functions is to perform a chemical reaction that converts a sugar called L-xylulose to a molecule called xylitol. (medlineplus.gov)
  • Without this protein, L-xylulose is not converted to xylitol, and the excess sugar is released in the urine. (medlineplus.gov)
  • One unit is defined as the amount of enzyme that catalyzes the formation of 1 μmol L-xylulose 5- phosphate from L-xylulose and ATP per minute at 37 °C. (chemilyglycoscience.com)
  • Since L-xylulose is a reducing sugar like D-glucose, pentosuria patients have been wrongly diagnosed in the past to be diabetic. (wikipedia.org)
  • Essential pentosuria is a condition characterized by high levels of a sugar called L-xylulose in urine. (medlineplus.gov)
  • While essential pentosuria is caused by genetic mutations, some people develop a non-inherited form of pentosuria if they eat excessive amounts of fruits high in L-xylulose or another pentose called L-arabinose. (medlineplus.gov)
  • Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H+ + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2. (ntu.edu.sg)
  • Mehmandoust Rad M, Abdossi V, Moradi P, Rakhshandehroo F, Mehrafarin A. Expression Analysis of Gene Encoding 1-Deoxy-d-Xylulose 5-Phosphate Reductoisomerase (DXR) and Cardenolide and Digitoxin Production in Digitalis purpurea L. Using Polyamines and Methyl Jasmonate as Elicitors. (ac.ir)
  • The Combined Loss of Triose Phosphate and Xylulose 5-Phosphate/Phosphate Translocators Leads to Severe Growth Retardation and Impaired Photosynthesis in Arabidopsis thaliana tpt/xpt Double Mutants. (mpg.de)
  • A common structural basis for the inhibition of ribulose 1,5-bisphosphate carboxylase by 4-carboxyarabinitol 1,5-bisphosphate and xylulose 1,5-bisphosphate. (cathdb.info)
  • Further experiments showed xylulose transport through the HXT family of non-specific glucose transporters. (oregonstate.edu)
  • Model predictions closely matched experimental xylulose utilization rates suggesting the combination of transport and xylulokinase constraints is sufficient to explain xylulose utilization limitation in S. cerevisiae. (oregonstate.edu)
  • Xylulose phosphorylation by xylulokinase was identified as limiting in wild type Saccharomyces cerevisiae, but transport became limiting when xylulokinase was upregulated. (oregonstate.edu)
  • The condition is so named because L-xylulose is a type of sugar called a pentose. (medlineplus.gov)