A genus of colorless, filamentous, rod-shaped bacteria in the family THIOTRICHACEAE, containing sulfur globules. Thiothrix species are found as components of BIOFILMS in irrigation systems and wastewater treatment plants, and in marine environments as endosymbionts.
A family of colorless sulfur bacteria in the order Thiotrichales, class GAMMAPROTEOBACTERIA.
Worthless, damaged, defective, superfluous or effluent material from industrial operations.
An order of mostly marine CRUSTACEA containing more than 5500 species in over 100 families. Like ISOPODA, the other large order in the superorder Peracarida, members are shrimp-like in appearance, have sessile compound eyes, and no carapace. But unlike Isopoda, they possess thoracic gills and their bodies are laterally compressed.
A group of the proteobacteria comprised of facultatively anaerobic and fermentative gram-negative bacteria.
The discarding or destroying of liquid waste products or their transformation into something useful or innocuous.
A group of gram-negative, anaerobic bacteria that is able to oxidize acetate completely to carbon dioxide using elemental sulfur as the electron acceptor.
A genus of gram-negative, rod-shaped bacteria that derives energy from the oxidation of one or more reduced sulfur compounds. Many former species have been reclassified to other classes of PROTEOBACTERIA.
DNA sequences encoding RIBOSOMAL RNA and the segments of DNA separating the individual ribosomal RNA genes, referred to as RIBOSOMAL SPACER DNA.
Constituent of 30S subunit prokaryotic ribosomes containing 1600 nucleotides and 21 proteins. 16S rRNA is involved in initiation of polypeptide synthesis.
The presence of bacteria, viruses, and fungi in water. This term is not restricted to pathogenic organisms.
Habitat of hot water naturally heated by underlying geologic processes. Surface hot springs have been used for BALNEOLOGY. Underwater hot springs are called HYDROTHERMAL VENTS.
Refuse liquid or waste matter carried off by sewers.
An element that is a member of the chalcogen family. It has an atomic symbol S, atomic number 16, and atomic weight [32.059; 32.076]. It is found in the amino acids cysteine and methionine.
Chemical groups containing the covalent sulfur bonds -S-. The sulfur atom can be bound to inorganic or organic moieties.
The relationships of groups of organisms as reflected by their genetic makeup.
Genes, found in both prokaryotes and eukaryotes, which are transcribed to produce the RNA which is incorporated into RIBOSOMES. Prokaryotic rRNA genes are usually found in OPERONS dispersed throughout the GENOME, whereas eukaryotic rRNA genes are clustered, multicistronic transcriptional units.
Deoxyribonucleic acid that makes up the genetic material of bacteria.
The relative amounts of the PURINES and PYRIMIDINES in a nucleic acid.
A multistage process that includes cloning, physical mapping, subcloning, determination of the DNA SEQUENCE, and information analysis.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.

Molecular analysis of the distribution and phylogeny of dissimilatory adenosine-5'-phosphosulfate reductase-encoding genes (aprBA) among sulfur-oxidizing prokaryotes. (1/3)

Dissimilatory adenosine-5'-phosphosulfate (APS) reductase (AprBA) is a key enzyme of the dissimilatory sulfate-reduction pathway. Homologues have been found in photo- and chemotrophic sulfur-oxidizing prokaryotes (SOP), in which they are postulated to operate in the reverse direction, oxidizing sulfite to APS. Newly developed PCR assays allowed the amplification of 92-93 % (2.1-2.3 kb) of the APS reductase locus aprBA. PCR-based screening of 116 taxonomically divergent SOP reference strains revealed a distribution of aprBA restricted to photo- and chemotrophs with strict anaerobic or at least facultative anaerobic lifestyles, including Chlorobiaceae, Chromatiaceae, Thiobacillus, Thiothrix and invertebrate symbionts. In the AprBA-based tree, the SOP diverge into two distantly related phylogenetic lineages, Apr lineages I and II, with the proteins of lineage II (Chlorobiaceae and others) in closer affiliation to the enzymes of the sulfate-reducing prokaryotes (SRP). This clustering is discordant with the dissimilatory sulfite reductase (DsrAB) phylogeny and indicates putative lateral aprBA gene transfer from SRP to the respective SOB lineages. In support of lateral gene transfer (LGT), several beta- and gammaproteobacterial species harbour both aprBA homologues, the DsrAB-congruent 'authentic' and the SRP-related, LGT-derived gene loci, while some relatives possess exclusively the SRP-related apr genes as a possible result of resident gene displacement by the xenologue. The two-gene state might be an intermediate in the replacement of the resident essential gene. Collected genome data demonstrate the correlation between the AprBA tree topology and the composition/arrangement of the apr gene loci (occurrence of qmoABC or aprM genes) from SRP and SOP of lineages I and II. The putative functional role of the SRP-related APS reductases in photo- and chemotrophic SOP is discussed.  (+info)

Thiothrix caldifontis sp. nov. and Thiothrix lacustris sp. nov., gammaproteobacteria isolated from sulfide springs. (2/3)

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Niphargus-Thiothrix associations may be widespread in sulphidic groundwater ecosystems: evidence from southeastern Romania. (3/3)

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Thiothrix is a genus of filamentous, sulfur-oxidizing bacteria that can be found in various aquatic environments such as wastewater treatment systems and freshwater sediments. These bacteria are characterized by their ability to form long, thin, and flexible filaments that can attach to surfaces or float freely in the water.

The medical relevance of Thiothrix is relatively limited, but it has been associated with some cases of pulmonary disease in individuals exposed to contaminated aerosols from wastewater treatment plants or other industrial settings. In these cases, inhalation of Thiothrix bacteria can lead to respiratory symptoms such as coughing, wheezing, and shortness of breath. However, it is important to note that Thiothrix is not considered a significant human pathogen, and its role in pulmonary disease remains unclear.

In summary, Thiothrix is a genus of sulfur-oxidizing bacteria that can be found in various aquatic environments and has been associated with some cases of pulmonary disease in individuals exposed to contaminated aerosols. However, it is not considered a significant human pathogen.

Thiotrichaceae is a family of proteobacteria characterized by the ability to oxidize inorganic sulfur compounds. The name Thiotrichaceae comes from the Greek words "thio," meaning sulfur, and "tricha," meaning hair, which refers to the filamentous or hair-like appearance of many members of this family. These bacteria are often found in environments with high sulfur content, such as sulfur springs, hot vents, and sewage treatment plants. They play an important role in the biogeochemical cycling of sulfur in the environment.

I'm sorry for any confusion, but "industrial waste" is not a term that has a medical definition. Industrial waste is a term used to describe waste produced by industrial activities, such as manufacturing, mining, and construction. It can include a wide variety of materials, including chemicals, metals, soil, and water. Proper management and disposal of industrial waste are important for protecting the environment and public health. If you have any questions related to healthcare or medical terminology, I'd be happy to try to help answer those!

Amphipoda is an order of crustaceans characterized by a laterally compressed body and a distinctive jointed swimming leg, making them well-adapted for swimming in open water. They are commonly known as "sand fleas" or "beach fleas," although they are not actually fleas. Amphipods can be found in various aquatic habitats, including marine, freshwater, and brackish environments. Some species live on the seafloor, while others are planktonic or associate with other organisms. They vary greatly in size, ranging from less than a millimeter to over 30 centimeters in length.

The medical definition of 'Amphipoda' is not typically used since amphipods do not have direct relevance to human health or medicine. However, they can serve as bioindicators of environmental quality and may be involved in the transmission of certain diseases between aquatic organisms.

Gammaproteobacteria is a class of proteobacteria, a group of Gram-negative bacteria. This class includes several important pathogens that can cause various diseases in humans, animals, and plants. Some examples of Gammaproteobacteria include Escherichia coli (a common cause of food poisoning), Pseudomonas aeruginosa (a leading cause of hospital-acquired infections), Vibrio cholerae (the causative agent of cholera), and Yersinia pestis (the bacterium that causes plague).

Gammaproteobacteria are characterized by their single flagellum, which is used for motility, and their outer membrane, which contains lipopolysaccharides that can elicit an immune response in host organisms. They are found in a wide range of environments, including soil, water, and the guts of animals. Some species are capable of fixing nitrogen, making them important contributors to nutrient cycling in ecosystems.

It's worth noting that while Gammaproteobacteria includes many pathogenic species, the majority of proteobacteria are not harmful and play important roles in various ecological systems.

Fluid waste disposal in a medical context refers to the proper and safe management of liquid byproducts generated during medical procedures, patient care, or research. These fluids can include bodily excretions (such as urine, feces, or vomit), irrigation solutions, blood, or other biological fluids.

The process of fluid waste disposal involves several steps:

1. Collection: Fluid waste is collected in appropriate containers that are designed to prevent leakage and contamination.
2. Segregation: Different types of fluid waste may require separate collection and disposal methods based on their infectious or hazardous nature.
3. Treatment: Depending on the type and volume of fluid waste, various treatments can be applied, such as disinfection, sterilization, or chemical neutralization, to reduce the risk of infection or harm to the environment and personnel.
4. Disposal: Treated fluid waste is then disposed of according to local regulations, which may involve transporting it to a designated waste management facility for further processing or disposal in a safe and environmentally friendly manner (e.g., deep well injection, incineration, or landfilling).
5. Documentation and tracking: Proper records should be maintained to ensure compliance with regulatory requirements and to enable effective monitoring and auditing of the waste disposal process.

It is essential to handle fluid waste disposal carefully to minimize the risk of infection, protect the environment, and maintain regulatory compliance. Healthcare facilities must adhere to strict guidelines and regulations regarding fluid waste management to ensure the safety of patients, staff, and the community.

Sulfate-reducing bacteria (SRB) are a group of bacteria that chemically reduce sulfates to produce hydrogen sulfide, elemental sulfur, and other sulfur compounds. They are anaerobic, meaning they do not require oxygen to live and grow. These bacteria are commonly found in environments like soil, water, and the digestive tracts of animals, including humans.

In the medical context, SRB can be associated with certain health conditions. For example, they can contribute to dental cavities by producing acid as a byproduct of their metabolism. They can also cause infections in people with compromised immune systems or implanted medical devices, such as heart valves or joint replacements. These infections can lead to the production of harmful sulfur compounds that can damage tissues and cause symptoms like pain, swelling, and discharge.

SRB are also known to play a role in some types of anaerobic digestion, where they help break down organic matter in wastewater treatment plants and other industrial settings. However, their ability to produce corrosive sulfur compounds can cause problems in these environments, such as damage to pipes and equipment.

Thiobacillus is a genus of gram-negative, rod-shaped bacteria that are capable of oxidizing inorganic sulfur compounds and sulfides to produce sulfuric acid. These bacteria play a significant role in the biogeochemical cycles of sulfur and carbon, particularly in environments like soil, water, and sediments. They are widely distributed in nature and can be found in various habitats such as acid mine drainage, sewage treatment plants, and even in the human respiratory system. Some species of Thiobacillus have been used in industrial applications for the bioremediation of heavy metal-contaminated soils and wastewater treatment. However, they can also contribute to the corrosion of metals and concrete structures due to their acid production.

Ribosomal DNA (rDNA) refers to the specific regions of DNA in a cell that contain the genes for ribosomal RNA (rRNA). Ribosomes are complex structures composed of proteins and rRNA, which play a crucial role in protein synthesis by translating messenger RNA (mRNA) into proteins.

In humans, there are four types of rRNA molecules: 18S, 5.8S, 28S, and 5S. These rRNAs are encoded by multiple copies of rDNA genes that are organized in clusters on specific chromosomes. In humans, the majority of rDNA genes are located on the short arms of acrocentric chromosomes 13, 14, 15, 21, and 22.

Each cluster of rDNA genes contains both transcribed and non-transcribed spacer regions. The transcribed regions contain the genes for the four types of rRNA, while the non-transcribed spacers contain regulatory elements that control the transcription of the rRNA genes.

The number of rDNA copies varies between species and even within individuals of the same species. The copy number can also change during development and in response to environmental factors. Variations in rDNA copy number have been associated with various diseases, including cancer and neurological disorders.

Ribosomal RNA (rRNA) is a type of RNA that combines with proteins to form ribosomes, which are complex structures inside cells where protein synthesis occurs. The "16S" refers to the sedimentation coefficient of the rRNA molecule, which is a measure of its size and shape. In particular, 16S rRNA is a component of the smaller subunit of the prokaryotic ribosome (found in bacteria and archaea), and is often used as a molecular marker for identifying and classifying these organisms due to its relative stability and conservation among species. The sequence of 16S rRNA can be compared across different species to determine their evolutionary relationships and taxonomic positions.

Water microbiology is not a formal medical term, but rather a branch of microbiology that deals with the study of microorganisms found in water. It involves the identification, enumeration, and characterization of bacteria, viruses, parasites, and other microscopic organisms present in water sources such as lakes, rivers, oceans, groundwater, drinking water, and wastewater.

In a medical context, water microbiology is relevant to public health because it helps to assess the safety of water supplies for human consumption and recreational activities. It also plays a critical role in understanding and preventing waterborne diseases caused by pathogenic microorganisms that can lead to illnesses such as diarrhea, skin infections, and respiratory problems.

Water microbiologists use various techniques to study water microorganisms, including culturing, microscopy, genetic analysis, and biochemical tests. They also investigate the ecology of these organisms, their interactions with other species, and their response to environmental factors such as temperature, pH, and nutrient availability.

Overall, water microbiology is a vital field that helps ensure the safety of our water resources and protects public health.

'Hot Springs' are a type of geothermal feature where water is heated by the Earth's internal heat and emerges from the ground at temperatures greater than the surrounding air temperature. The water in hot springs can range in temperature from warm to extremely hot, and it is often rich in minerals such as calcium, magnesium, sulfur, and sodium.

People have been using hot springs for thousands of years for various purposes, including relaxation, recreation, and therapeutic benefits. The heat and mineral content of the water can help to soothe sore muscles, improve circulation, and promote healing in some cases. However, it is important to note that not all hot springs are safe for bathing, as some may contain harmful bacteria or pollutants. It is always recommended to check with local authorities before using a hot spring for therapeutic purposes.

Sewage is not typically considered a medical term, but it does have relevance to public health and medicine. Sewage is the wastewater that is produced by households and industries, which contains a variety of contaminants including human waste, chemicals, and other pollutants. It can contain various pathogens such as bacteria, viruses, and parasites, which can cause diseases in humans if they come into contact with it or consume contaminated food or water. Therefore, the proper treatment and disposal of sewage is essential to prevent the spread of infectious diseases and protect public health.

Sulfur is not typically referred to in the context of a medical definition, as it is an element found in nature and not a specific medical condition or concept. However, sulfur does have some relevance to certain medical topics:

* Sulfur is an essential element that is a component of several amino acids (the building blocks of proteins) and is necessary for the proper functioning of enzymes and other biological processes in the body.
* Sulfur-containing compounds, such as glutathione, play important roles in antioxidant defense and detoxification in the body.
* Some medications and supplements contain sulfur or sulfur-containing compounds, such as dimethyl sulfoxide (DMSO), which is used topically for pain relief and inflammation.
* Sulfur baths and other forms of sulfur-based therapies have been used historically in alternative medicine to treat various conditions, although their effectiveness is not well-established by scientific research.

It's important to note that while sulfur itself is not a medical term, it can be relevant to certain medical topics and should be discussed with a healthcare professional if you have any questions or concerns about its use in medications, supplements, or therapies.

In the context of medicine and toxicology, sulfides refer to inorganic or organic compounds containing the sulfide ion (S2-). Sulfides can be found in various forms such as hydrogen sulfide (H2S), metal sulfides, and organic sulfides (also known as thioethers).

Hydrogen sulfide is a toxic gas with a characteristic rotten egg smell. It can cause various adverse health effects, including respiratory irritation, headaches, nausea, and, at high concentrations, loss of consciousness or even death. Metal sulfides, such as those found in some minerals, can also be toxic and may release hazardous sulfur dioxide (SO2) when heated or reacted with acidic substances.

Organic sulfides, on the other hand, are a class of organic compounds containing a sulfur atom bonded to two carbon atoms. They can occur naturally in some plants and animals or be synthesized in laboratories. Some organic sulfides have medicinal uses, while others may pose health risks depending on their concentration and route of exposure.

It is important to note that the term "sulfide" has different meanings in various scientific contexts, so it is essential to consider the specific context when interpreting this term.

Phylogeny is the evolutionary history and relationship among biological entities, such as species or genes, based on their shared characteristics. In other words, it refers to the branching pattern of evolution that shows how various organisms have descended from a common ancestor over time. Phylogenetic analysis involves constructing a tree-like diagram called a phylogenetic tree, which depicts the inferred evolutionary relationships among organisms or genes based on molecular sequence data or other types of characters. This information is crucial for understanding the diversity and distribution of life on Earth, as well as for studying the emergence and spread of diseases.

rRNA (ribosomal RNA) is not a type of gene itself, but rather a crucial component that is transcribed from genes known as ribosomal DNA (rDNA). In cells, rRNA plays an essential role in protein synthesis by assembling with ribosomal proteins to form ribosomes. Ribosomes are complex structures where the translation of mRNA into proteins occurs. There are multiple types of rRNA molecules, including 5S, 5.8S, 18S, and 28S rRNAs in eukaryotic cells, each with specific functions during protein synthesis.

In summary, 'Genes, rRNA' would refer to the genetic regions (genes) that code for ribosomal RNA molecules, which are vital components of the protein synthesis machinery within cells.

Bacterial DNA refers to the genetic material found in bacteria. It is composed of a double-stranded helix containing four nucleotide bases - adenine (A), thymine (T), guanine (G), and cytosine (C) - that are linked together by phosphodiester bonds. The sequence of these bases in the DNA molecule carries the genetic information necessary for the growth, development, and reproduction of bacteria.

Bacterial DNA is circular in most bacterial species, although some have linear chromosomes. In addition to the main chromosome, many bacteria also contain small circular pieces of DNA called plasmids that can carry additional genes and provide resistance to antibiotics or other environmental stressors.

Unlike eukaryotic cells, which have their DNA enclosed within a nucleus, bacterial DNA is present in the cytoplasm of the cell, where it is in direct contact with the cell's metabolic machinery. This allows for rapid gene expression and regulation in response to changing environmental conditions.

Base composition in genetics refers to the relative proportion of the four nucleotide bases (adenine, thymine, guanine, and cytosine) in a DNA or RNA molecule. In DNA, adenine pairs with thymine, and guanine pairs with cytosine, so the base composition is often expressed in terms of the ratio of adenine + thymine (A-T) to guanine + cytosine (G-C). This ratio can vary between species and even between different regions of the same genome. The base composition can provide important clues about the function, evolution, and structure of genetic material.

DNA Sequence Analysis is the systematic determination of the order of nucleotides in a DNA molecule. It is a critical component of modern molecular biology, genetics, and genetic engineering. The process involves determining the exact order of the four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - in a DNA molecule or fragment. This information is used in various applications such as identifying gene mutations, studying evolutionary relationships, developing molecular markers for breeding, and diagnosing genetic diseases.

The process of DNA Sequence Analysis typically involves several steps, including DNA extraction, PCR amplification (if necessary), purification, sequencing reaction, and electrophoresis. The resulting data is then analyzed using specialized software to determine the exact sequence of nucleotides.

In recent years, high-throughput DNA sequencing technologies have revolutionized the field of genomics, enabling the rapid and cost-effective sequencing of entire genomes. This has led to an explosion of genomic data and new insights into the genetic basis of many diseases and traits.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

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