An analytical method used in determining the identity of a chemical based on its mass using mass analyzers/mass spectrometers.
The property of emitting radiation while being irradiated. The radiation emitted is usually of longer wavelength than that incident or absorbed, e.g., a substance can be irradiated with invisible radiation and emit visible light. X-ray fluorescence is used in diagnosis.
Measurement of the intensity and quality of fluorescence.
A mass spectrometry technique used for analysis of nonvolatile compounds such as proteins and macromolecules. The technique involves preparing electrically charged droplets from analyte molecules dissolved in solvent. The electrically charged droplets enter a vacuum chamber where the solvent is evaporated. Evaporation of solvent reduces the droplet size, thereby increasing the coulombic repulsion within the droplet. As the charged droplets get smaller, the excess charge within them causes them to disintegrate and release analyte molecules. The volatilized analyte molecules are then analyzed by mass spectrometry.
A mass spectrometry technique using two (MS/MS) or more mass analyzers. With two in tandem, the precursor ions are mass-selected by a first mass analyzer, and focused into a collision region where they are then fragmented into product ions which are then characterized by a second mass analyzer. A variety of techniques are used to separate the compounds, ionize them, and introduce them to the first mass analyzer. For example, for in GC-MS/MS, GAS CHROMATOGRAPHY-MASS SPECTROMETRY is involved in separating relatively small compounds by GAS CHROMATOGRAPHY prior to injecting them into an ionization chamber for the mass selection.
Microscopy of specimens stained with fluorescent dye (usually fluorescein isothiocyanate) or of naturally fluorescent materials, which emit light when exposed to ultraviolet or blue light. Immunofluorescence microscopy utilizes antibodies that are labeled with fluorescent dye.
A microanalytical technique combining mass spectrometry and gas chromatography for the qualitative as well as quantitative determinations of compounds.
A mass spectrometric technique that is used for the analysis of large biomolecules. Analyte molecules are embedded in an excess matrix of small organic molecules that show a high resonant absorption at the laser wavelength used. The matrix absorbs the laser energy, thus inducing a soft disintegration of the sample-matrix mixture into free (gas phase) matrix and analyte molecules and molecular ions. In general, only molecular ions of the analyte molecules are produced, and almost no fragmentation occurs. This makes the method well suited for molecular weight determinations and mixture analysis.
Measurement of the polarization of fluorescent light from solutions or microscopic specimens. It is used to provide information concerning molecular size, shape, and conformation, molecular anisotropy, electronic energy transfer, molecular interaction, including dye and coenzyme binding, and the antigen-antibody reaction.
A type of IN SITU HYBRIDIZATION in which target sequences are stained with fluorescent dye so their location and size can be determined using fluorescence microscopy. This staining is sufficiently distinct that the hybridization signal can be seen both in metaphase spreads and in interphase nuclei.
Agents that emit light after excitation by light. The wave length of the emitted light is usually longer than that of the incident light. Fluorochromes are substances that cause fluorescence in other substances, i.e., dyes used to mark or label other compounds with fluorescent tags.
A type of FLUORESCENCE SPECTROSCOPY using two FLUORESCENT DYES with overlapping emission and absorption spectra, which is used to indicate proximity of labeled molecules. This technique is useful for studying interactions of molecules and PROTEIN FOLDING.
Chromatographic techniques in which the mobile phase is a liquid.
Liquid chromatographic techniques which feature high inlet pressures, high sensitivity, and high speed.
A mass-spectrometric technique that is used for microscopic chemical analysis. A beam of primary ions with an energy of 5-20 kiloelectronvolts (keV) bombards a small spot on the surface of the sample under ultra-high vacuum conditions. Positive and negative secondary ions sputtered from the surface are analyzed in a mass spectrometer in regards to their mass-to-charge ratio. Digital imaging can be generated from the secondary ion beams and their intensity can be measured. Ionic images can be correlated with images from light or other microscopy providing useful tools in the study of molecular and drug actions.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
A method used to study the lateral movement of MEMBRANE PROTEINS and LIPIDS. A small area of a cell membrane is bleached by laser light and the amount of time necessary for unbleached fluorescent marker-tagged proteins to diffuse back into the bleached site is a measurement of the cell membrane's fluidity. The diffusion coefficient of a protein or lipid in the membrane can be calculated from the data. (From Segen, Current Med Talk, 1995).
The systematic study of the complete complement of proteins (PROTEOME) of organisms.
Fluorescence microscopy utilizing multiple low-energy photons to produce the excitation event of the fluorophore. Multiphoton microscopes have a simplified optical path in the emission side due to the lack of an emission pinhole, which is necessary with normal confocal microscopes. Ultimately this allows spatial isolation of the excitation event, enabling deeper imaging into optically thick tissue, while restricting photobleaching and phototoxicity to the area being imaged.
The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION.
A mass spectrometric technique that is used for the analysis of a wide range of biomolecules, such as glycoalkaloids, glycoproteins, polysaccharides, and peptides. Positive and negative fast atom bombardment spectra are recorded on a mass spectrometer fitted with an atom gun with xenon as the customary beam. The mass spectra obtained contain molecular weight recognition as well as sequence information.
The rate dynamics in chemical or physical systems.
An essential amino acid that is necessary for normal growth in infants and for NITROGEN balance in adults. It is a precursor of INDOLE ALKALOIDS in plants. It is a precursor of SEROTONIN (hence its use as an antidepressant and sleep aid). It can be a precursor to NIACIN, albeit inefficiently, in mammals.
The process in which substances, either endogenous or exogenous, bind to proteins, peptides, enzymes, protein precursors, or allied compounds. Specific protein-binding measures are often used as assays in diagnostic assessments.
Protein analogs and derivatives of the Aequorea victoria green fluorescent protein that emit light (FLUORESCENCE) when excited with ULTRAVIOLET RAYS. They are used in REPORTER GENES in doing GENETIC TECHNIQUES. Numerous mutants have been made to emit other colors or be sensitive to pH.
The protein complement of an organism coded for by its genome.
The transfer of energy of a given form among different scales of motion. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed). It includes the transfer of kinetic energy and the transfer of chemical energy. The transfer of chemical energy from one molecule to another depends on proximity of molecules so it is often used as in techniques to measure distance such as the use of FORSTER RESONANCE ENERGY TRANSFER.
The statistical reproducibility of measurements (often in a clinical context), including the testing of instrumentation or techniques to obtain reproducible results. The concept includes reproducibility of physiological measurements, which may be used to develop rules to assess probability or prognosis, or response to a stimulus; reproducibility of occurrence of a condition; and reproducibility of experimental results.
A family of 3,6-di(substituted-amino)-9-benzoate derivatives of xanthene that are used as dyes and as indicators for various metals; also used as fluorescent tracers in histochemistry.
The location of the atoms, groups or ions relative to one another in a molecule, as well as the number, type and location of covalent bonds.
Proteins which are involved in the phenomenon of light emission in living systems. Included are the "enzymatic" and "non-enzymatic" types of system with or without the presence of oxygen or co-factors.
The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain).
Determination, by measurement or comparison with a standard, of the correct value of each scale reading on a meter or other measuring instrument; or determination of the settings of a control device that correspond to particular values of voltage, current, frequency or other output.
Binary classification measures to assess test results. Sensitivity or recall rate is the proportion of true positives. Specificity is the probability of correctly determining the absence of a condition. (From Last, Dictionary of Epidemiology, 2d ed)
A family of spiro(isobenzofuran-1(3H),9'-(9H)xanthen)-3-one derivatives. These are used as dyes, as indicators for various metals, and as fluorescent labels in immunoassays.
Members of the class of compounds composed of AMINO ACIDS joined together by peptide bonds between adjacent amino acids into linear, branched or cyclical structures. OLIGOPEPTIDES are composed of approximately 2-12 amino acids. Polypeptides are composed of approximately 13 or more amino acids. PROTEINS are linear polypeptides that are normally synthesized on RIBOSOMES.
A light microscopic technique in which only a small spot is illuminated and observed at a time. An image is constructed through point-by-point scanning of the field in this manner. Light sources may be conventional or laser, and fluorescence or transmitted observations are possible.
An analytical method for detecting and measuring FLUORESCENCE in compounds or targets such as cells, proteins, or nucleotides, or targets previously labeled with FLUORESCENCE AGENTS.
Compounds that contain three methine groups. They are frequently used as cationic dyes used for differential staining of biological materials.
The use of light interaction (scattering, absorption, and fluorescence) with biological tissue to obtain morphologically based information. It includes measuring inherent tissue optical properties such as scattering, absorption, and autofluorescence; or optical properties of exogenous targeted fluorescent molecular probes such as those used in optical MOLECULAR IMAGING, or nontargeted optical CONTRAST AGENTS.
The normality of a solution with respect to HYDROGEN ions; H+. It is related to acidity measurements in most cases by pH = log 1/2[1/(H+)], where (H+) is the hydrogen ion concentration in gram equivalents per liter of solution. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
Substances used for the detection, identification, analysis, etc. of chemical, biological, or pathologic processes or conditions. Indicators are substances that change in physical appearance, e.g., color, at or approaching the endpoint of a chemical titration, e.g., on the passage between acidity and alkalinity. Reagents are substances used for the detection or determination of another substance by chemical or microscopical means, especially analysis. Types of reagents are precipitants, solvents, oxidizers, reducers, fluxes, and colorimetric reagents. (From Grant & Hackh's Chemical Dictionary, 5th ed, p301, p499)
A change from planar to elliptic polarization when an initially plane-polarized light wave traverses an optically active medium. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
Electrophoresis in which a second perpendicular electrophoretic transport is performed on the separate components resulting from the first electrophoresis. This technique is usually performed on polyacrylamide gels.
The parts of a macromolecule that directly participate in its specific combination with another molecule.
Fluoroimmunoassay where detection of the hapten-antibody reaction is based on measurement of the increased polarization of fluorescence-labeled hapten when it is combined with antibody. The assay is very useful for the measurement of small haptenic antigens such as drugs at low concentrations.
Elements of limited time intervals, contributing to particular results or situations.
Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures.
Determination of the spectra of ultraviolet absorption by specific molecules in gases or liquids, for example Cl2, SO2, NO2, CS2, ozone, mercury vapor, and various unsaturated compounds. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
A basis of value established for the measure of quantity, weight, extent or quality, e.g. weight standards, standard solutions, methods, techniques, and procedures used in diagnosis and therapy.
The spectrometric analysis of fluorescent X-RAYS, i.e. X-rays emitted after bombarding matter with high energy particles such as PROTONS; ELECTRONS; or higher energy X-rays. Identification of ELEMENTS by this technique is based on the specific type of X-rays that are emitted which are characteristic of the specific elements in the material being analyzed. The characteristic X-rays are distinguished and/or quantified by either wavelength dispersive or energy dispersive methods.
Light-induced change in a chromophore, resulting in the loss of its absorption of light of a particular wave length. The photon energy causes a conformational change in the photoreceptor proteins affecting PHOTOTRANSDUCTION. This occurs naturally in the retina (ADAPTATION, OCULAR) on long exposure to bright light. Photobleaching presents problems when occurring in PHOTODYNAMIC THERAPY, and in FLUORESCENCE MICROSCOPY. On the other hand, this phenomenon is exploited in the technique, FLUORESCENCE RECOVERY AFTER PHOTOBLEACHING, allowing measurement of the movements of proteins and LIPIDS in the CELL MEMBRANE.
Discrete concentrations of energy, apparently massless elementary particles, that move at the speed of light. They are the unit or quantum of electromagnetic radiation. Photons are emitted when electrons move from one energy state to another. (From Hawley's Condensed Chemical Dictionary, 11th ed)
Spectroscopic method of measuring the magnetic moment of elementary particles such as atomic nuclei, protons or electrons. It is employed in clinical applications such as NMR Tomography (MAGNETIC RESONANCE IMAGING).
An optical source that emits photons in a coherent beam. Light Amplification by Stimulated Emission of Radiation (LASER) is brought about using devices that transform light of varying frequencies into a single intense, nearly nondivergent beam of monochromatic radiation. Lasers operate in the infrared, visible, ultraviolet, or X-ray regions of the spectrum.
Spectrophotometric techniques by which the absorption or emmision spectra of radiation from atoms are produced and analyzed.
The property of objects that determines the direction of heat flow when they are placed in direct thermal contact. The temperature is the energy of microscopic motions (vibrational and translational) of the particles of atoms.
A class of organic compounds which contain an anilino (phenylamino) group linked to a salt or ester of naphthalenesulfonic acid. They are frequently used as fluorescent dyes and sulfhydryl reagents.
Concentration or quantity that is derived from the smallest measure that can be detected with reasonable certainty for a given analytical procedure.
A phthalic indicator dye that appears yellow-green in normal tear film and bright green in a more alkaline medium such as the aqueous humor.
A research technique to measure solvent exposed regions of molecules that is used to provide insight about PROTEIN CONFORMATION.
Domesticated bovine animals of the genus Bos, usually kept on a farm or ranch and used for the production of meat or dairy products or for heavy labor.
Detection of drugs that have been abused, overused, or misused, including legal and illegal drugs. Urine screening is the usual method of detection.
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.
An atom or group of atoms that have a positive or negative electric charge due to a gain (negative charge) or loss (positive charge) of one or more electrons. Atoms with a positive charge are known as CATIONS; those with a negative charge are ANIONS.
The use of molecularly targeted imaging probes to localize and/or monitor biochemical and cellular processes via various imaging modalities that include RADIONUCLIDE IMAGING; ULTRASONOGRAPHY; MAGNETIC RESONANCE IMAGING; FLUORESCENCE IMAGING; and MICROSCOPY.
Porphyrin derivatives containing magnesium that act to convert light energy in photosynthetic organisms.
A naphthalene derivative with carcinogenic action.
Fluorescent probe capable of being conjugated to tissue and proteins. It is used as a label in fluorescent antibody staining procedures as well as protein- and amino acid-binding techniques.
Techniques for labeling a substance with a stable or radioactive isotope. It is not used for articles involving labeled substances unless the methods of labeling are substantively discussed. Tracers that may be labeled include chemical substances, cells, or microorganisms.
Theoretical representations that simulate the behavior or activity of chemical processes or phenomena; includes the use of mathematical equations, computers, and other electronic equipment.
A chemical reaction in which an electron is transferred from one molecule to another. The electron-donating molecule is the reducing agent or reductant; the electron-accepting molecule is the oxidizing agent or oxidant. Reducing and oxidizing agents function as conjugate reductant-oxidant pairs or redox pairs (Lehninger, Principles of Biochemistry, 1982, p471).
A group of condensed ring hydrocarbons.
The tendency of a gas or solute to pass from a point of higher pressure or concentration to a point of lower pressure or concentration and to distribute itself throughout the available space. Diffusion, especially FACILITATED DIFFUSION, is a major mechanism of BIOLOGICAL TRANSPORT.
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
Partial proteins formed by partial hydrolysis of complete proteins or generated through PROTEIN ENGINEERING techniques.
A colorless, odorless, highly water soluble vinyl monomer formed from the hydration of acrylonitrile. It is primarily used in research laboratories for electrophoresis, chromatography, and electron microscopy and in the sewage and wastewater treatment industries.
Analysis of PEPTIDES that are generated from the digestion or fragmentation of a protein or mixture of PROTEINS, by ELECTROPHORESIS; CHROMATOGRAPHY; or MASS SPECTROMETRY. The resulting peptide fingerprints are analyzed for a variety of purposes including the identification of the proteins in a sample, GENETIC POLYMORPHISMS, patterns of gene expression, and patterns diagnostic for diseases.
The lipid- and protein-containing, selectively permeable membrane that surrounds the cytoplasm in prokaryotic and eukaryotic cells.
Proteins prepared by recombinant DNA technology.
The level of protein structure in which combinations of secondary protein structures (alpha helices, beta sheets, loop regions, and motifs) pack together to form folded shapes called domains. Disulfide bridges between cysteines in two different parts of the polypeptide chain along with other interactions between the chains play a role in the formation and stabilization of tertiary structure. Small proteins usually consist of only one domain but larger proteins may contain a number of domains connected by segments of polypeptide chain which lack regular secondary structure.
Established cell cultures that have the potential to propagate indefinitely.
The marking of biological material with a dye or other reagent for the purpose of identifying and quantitating components of tissues, cells or their extracts.
An extraction method that separates analytes using a solid phase and a liquid phase. It is used for preparative sample cleanup before analysis by CHROMATOGRAPHY and other analytical methods.
Deuterium. The stable isotope of hydrogen. It has one neutron and one proton in the nucleus.
That portion of the electromagnetic spectrum in the visible, ultraviolet, and infrared range.
Fractionation of a vaporized sample as a consequence of partition between a mobile gaseous phase and a stationary phase held in a column. Two types are gas-solid chromatography, where the fixed phase is a solid, and gas-liquid, in which the stationary phase is a nonvolatile liquid supported on an inert solid matrix.
A basic element found in nearly all organized tissues. It is a member of the alkaline earth family of metals with the atomic symbol Ca, atomic number 20, and atomic weight 40. Calcium is the most abundant mineral in the body and combines with phosphorus to form calcium phosphate in the bones and teeth. It is essential for the normal functioning of nerves and muscles and plays a role in blood coagulation (as factor IV) and in many enzymatic processes.
Proteins found in any species of bacterium.
Compounds that contain a 1-dimethylaminonaphthalene-5-sulfonyl group.
The sequence of carbohydrates within POLYSACCHARIDES; GLYCOPROTEINS; and GLYCOLIPIDS.
A highly-sensitive (in the picomolar range, which is 10,000-fold more sensitive than conventional electrophoresis) and efficient technique that allows separation of PROTEINS; NUCLEIC ACIDS; and CARBOHYDRATES. (Segen, Dictionary of Modern Medicine, 1992)
Chromatography on thin layers of adsorbents rather than in columns. The adsorbent can be alumina, silica gel, silicates, charcoals, or cellulose. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
A class of organic compounds that contains a naphthalene moiety linked to a sulfonic acid salt or ester.
Cells propagated in vitro in special media conducive to their growth. Cultured cells are used to study developmental, morphologic, metabolic, physiologic, and genetic processes, among others.
Disruption of the non-covalent bonds and/or disulfide bonds responsible for maintaining the three-dimensional shape and activity of the native protein.
A fluorescent compound that emits light only in specific configurations in certain lipid media. It is used as a tool in the study of membrane lipids.
Artificial, single or multilaminar vesicles (made from lecithins or other lipids) that are used for the delivery of a variety of biological molecules or molecular complexes to cells, for example, drug delivery and gene transfer. They are also used to study membranes and membrane proteins.
Theoretical representations that simulate the behavior or activity of biological processes or diseases. For disease models in living animals, DISEASE MODELS, ANIMAL is available. Biological models include the use of mathematical equations, computers, and other electronic equipment.
Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations.
Recombinant proteins produced by the GENETIC TRANSLATION of fused genes formed by the combination of NUCLEIC ACID REGULATORY SEQUENCES of one or more genes with the protein coding sequences of one or more genes.
The development and use of techniques to study physical phenomena and construct structures in the nanoscale size range or smaller.
The study of PHYSICAL PHENOMENA and PHYSICAL PROCESSES as applied to living things.
The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence.
Nanometer sized fragments of semiconductor crystalline material which emit PHOTONS. The wavelength is based on the quantum confinement size of the dot. They can be embedded in MICROBEADS for high throughput ANALYTICAL CHEMISTRY TECHNIQUES.
A rigorously mathematical analysis of energy relationships (heat, work, temperature, and equilibrium). It describes systems whose states are determined by thermal parameters, such as temperature, in addition to mechanical and electromagnetic parameters. (From Hawley's Condensed Chemical Dictionary, 12th ed)
Electrophoresis in which a polyacrylamide gel is used as the diffusion medium.
The measurement of the amplitude of the components of a complex waveform throughout the frequency range of the waveform. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
The phenomenon whereby certain chemical compounds have structures that are different although the compounds possess the same elemental composition. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 5th ed)
Derivatives of phosphatidic acids in which the phosphoric acid is bound in ester linkage to a choline moiety. Complete hydrolysis yields 1 mole of glycerol, phosphoric acid and choline and 2 moles of fatty acids.
The species Oryctolagus cuniculus, in the family Leporidae, order LAGOMORPHA. Rabbits are born in burrows, furless, and with eyes and ears closed. In contrast with HARES, rabbits have 22 chromosome pairs.
Technique using an instrument system for making, processing, and displaying one or more measurements on individual cells obtained from a cell suspension. Cells are usually stained with one or more fluorescent dyes specific to cell components of interest, e.g., DNA, and fluorescence of each cell is measured as it rapidly transverses the excitation beam (laser or mercury arc lamp). Fluorescence provides a quantitative measure of various biochemical and biophysical properties of the cell, as well as a basis for cell sorting. Other measurable optical parameters include light absorption and light scattering, the latter being applicable to the measurement of cell size, shape, density, granularity, and stain uptake.
The process of cleaving a chemical compound by the addition of a molecule of water.
A thiol-containing non-essential amino acid that is oxidized to form CYSTINE.
Processes involved in the formation of TERTIARY PROTEIN STRUCTURE.
The systematic identification and quantitation of all the metabolic products of a cell, tissue, organ, or organism under varying conditions. The METABOLOME of a cell or organism is a dynamic collection of metabolites which represent its net response to current conditions.
The characteristic three-dimensional shape of a molecule.
The physical characteristics and processes of biological systems.
Any of a variety of procedures which use biomolecular probes to measure the presence or concentration of biological molecules, biological structures, microorganisms, etc., by translating a biochemical interaction at the probe surface into a quantifiable physical signal.
A procedure consisting of a sequence of algebraic formulas and/or logical steps to calculate or determine a given task.
A compound produced from succinyl-CoA and GLYCINE as an intermediate in heme synthesis. It is used as a PHOTOCHEMOTHERAPY for actinic KERATOSIS.
A serine endopeptidase that is formed from TRYPSINOGEN in the pancreas. It is converted into its active form by ENTEROPEPTIDASE in the small intestine. It catalyzes hydrolysis of the carboxyl group of either arginine or lysine. EC 3.4.21.4.
Use of various chemical separation and extraction methods, such as SOLID PHASE EXTRACTION; CHROMATOGRAPHY; and SUPERCRITICAL FLUID EXTRACTION; to prepare samples for analytical measurement of components.
The development and use of techniques and equipment to study or perform chemical reactions, with small quantities of materials, frequently less than a milligram or a milliliter.
The art or process of comparing photometrically the relative intensities of the light in different parts of the spectrum.
A cell line derived from cultured tumor cells.
The level of protein structure in which regular hydrogen-bond interactions within contiguous stretches of polypeptide chain give rise to alpha helices, beta strands (which align to form beta sheets) or other types of coils. This is the first folding level of protein conformation.
Test for tissue antigen using either a direct method, by conjugation of antibody with fluorescent dye (FLUORESCENT ANTIBODY TECHNIQUE, DIRECT) or an indirect method, by formation of antigen-antibody complex which is then labeled with fluorescein-conjugated anti-immunoglobulin antibody (FLUORESCENT ANTIBODY TECHNIQUE, INDIRECT). The tissue is then examined by fluorescence microscopy.
A group of atoms or molecules attached to other molecules or cellular structures and used in studying the properties of these molecules and structures. Radioactive DNA or RNA sequences are used in MOLECULAR GENETICS to detect the presence of a complementary sequence by NUCLEIC ACID HYBRIDIZATION.
Layers of lipid molecules which are two molecules thick. Bilayer systems are frequently studied as models of biological membranes.
The deductive study of shape, quantity, and dependence. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
Analysis based on the mathematical function first formulated by Jean-Baptiste-Joseph Fourier in 1807. The function, known as the Fourier transform, describes the sinusoidal pattern of any fluctuating pattern in the physical world in terms of its amplitude and its phase. It has broad applications in biomedicine, e.g., analysis of the x-ray crystallography data pivotal in identifying the double helical nature of DNA and in analysis of other molecules, including viruses, and the modified back-projection algorithm universally used in computerized tomography imaging, etc. (From Segen, The Dictionary of Modern Medicine, 1992)
A spectroscopic technique in which a range of wavelengths is presented simultaneously with an interferometer and the spectrum is mathematically derived from the pattern thus obtained.
A broad class of substances containing carbon and its derivatives. Many of these chemicals will frequently contain hydrogen with or without oxygen, nitrogen, sulfur, phosphorus, and other elements. They exist in either carbon chain or carbon ring form.
A strong organic base existing primarily as guanidium ions at physiological pH. It is found in the urine as a normal product of protein metabolism. It is also used in laboratory research as a protein denaturant. (From Martindale, the Extra Pharmacopoeia, 30th ed and Merck Index, 12th ed) It is also used in the treatment of myasthenia and as a fluorescent probe in HPLC.
A tricarbocyanine dye that is used diagnostically in liver function tests and to determine blood volume and cardiac output.
Methodologies used for the isolation, identification, detection, and quantitation of chemical substances.
A molecule that binds to another molecule, used especially to refer to a small molecule that binds specifically to a larger molecule, e.g., an antigen binding to an antibody, a hormone or neurotransmitter binding to a receptor, or a substrate or allosteric effector binding to an enzyme. Ligands are also molecules that donate or accept a pair of electrons to form a coordinate covalent bond with the central metal atom of a coordination complex. (From Dorland, 27th ed)
Liquids that dissolve other substances (solutes), generally solids, without any change in chemical composition, as, water containing sugar. (Grant & Hackh's Chemical Dictionary, 5th ed)
Methods for assessing flow through a system by injection of a known quantity of an indicator, such as a dye, radionuclide, or chilled liquid, into the system and monitoring its concentration over time at a specific point in the system. (From Dorland, 28th ed)
A characteristic feature of enzyme activity in relation to the kind of substrate on which the enzyme or catalytic molecule reacts.
Any of various enzymatically catalyzed post-translational modifications of PEPTIDES or PROTEINS in the cell of origin. These modifications include carboxylation; HYDROXYLATION; ACETYLATION; PHOSPHORYLATION; METHYLATION; GLYCOSYLATION; ubiquitination; oxidation; proteolysis; and crosslinking and result in changes in molecular weight and electrophoretic motility.
Proteins which are found in membranes including cellular and intracellular membranes. They consist of two types, peripheral and integral proteins. They include most membrane-associated enzymes, antigenic proteins, transport proteins, and drug, hormone, and lectin receptors.
The homogeneous mixtures formed by the mixing of a solid, liquid, or gaseous substance (solute) with a liquid (the solvent), from which the dissolved substances can be recovered by physical processes. (From Grant & Hackh's Chemical Dictionary, 5th ed)
That portion of the electromagnetic spectrum usually sensed as heat. Infrared wavelengths are longer than those of visible light, extending into the microwave frequencies. They are used therapeutically as heat, and also to warm food in restaurants.
Lipids containing one or more phosphate groups, particularly those derived from either glycerol (phosphoglycerides see GLYCEROPHOSPHOLIPIDS) or sphingosine (SPHINGOLIPIDS). They are polar lipids that are of great importance for the structure and function of cell membranes and are the most abundant of membrane lipids, although not stored in large amounts in the system.
The motion of phospholipid molecules within the lipid bilayer, dependent on the classes of phospholipids present, their fatty acid composition and degree of unsaturation of the acyl chains, the cholesterol concentration, and temperature.
Chemicals and substances that impart color including soluble dyes and insoluble pigments. They are used in INKS; PAINTS; and as INDICATORS AND REAGENTS.
The application of medical knowledge to questions of law.
Carbohydrates consisting of between two (DISACCHARIDES) and ten MONOSACCHARIDES connected by either an alpha- or beta-glycosidic link. They are found throughout nature in both the free and bound form.
The dynamic collection of metabolites which represent a cell's or organism's net metabolic response to current conditions.
The process by which two molecules of the same chemical composition form a condensation product or polymer.
A noninvasive technique that uses the differential absorption properties of hemoglobin and myoglobin to evaluate tissue oxygenation and indirectly can measure regional hemodynamics and blood flow. Near-infrared light (NIR) can propagate through tissues and at particular wavelengths is differentially absorbed by oxygenated vs. deoxygenated forms of hemoglobin and myoglobin. Illumination of intact tissue with NIR allows qualitative assessment of changes in the tissue concentration of these molecules. The analysis is also used to determine body composition.
The sum of the weight of all the atoms in a molecule.
Atomic species differing in mass number but having the same atomic number. (Grant & Hackh's Chemical Dictionary, 5th ed)
The chemical or biochemical addition of carbohydrate or glycosyl groups to other chemicals, especially peptides or proteins. Glycosyl transferases are used in this biochemical reaction.
Porphyrins with four methyl, two vinyl, and two propionic acid side chains attached to the pyrrole rings. Protoporphyrin IX occurs in hemoglobin, myoglobin, and most of the cytochromes.
Inorganic or organic compounds that contain boron as an integral part of the molecule.
A clear, odorless, tasteless liquid that is essential for most animal and plant life and is an excellent solvent for many substances. The chemical formula is hydrogen oxide (H2O). (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
Any visual display of structural or functional patterns of organs or tissues for diagnostic evaluation. It includes measuring physiologic and metabolic responses to physical and chemical stimuli, as well as ultramicroscopy.
An adenine nucleotide containing three phosphate groups esterified to the sugar moiety. In addition to its crucial roles in metabolism adenosine triphosphate is a neurotransmitter.
The first continuously cultured human malignant CELL LINE, derived from the cervical carcinoma of Henrietta Lacks. These cells are used for VIRUS CULTIVATION and antitumor drug screening assays.
A benzofuran derivative used as a protein reagent since the terminal N-NBD-protein conjugate possesses interesting fluorescence and spectral properties. It has also been used as a covalent inhibitor of both beef heart mitochondrial ATPase and bacterial ATPase.
The characteristic 3-dimensional shape of a carbohydrate.
Colorless, odorless crystals that are used extensively in research laboratories for the preparation of polyacrylamide gels for electrophoresis and in organic synthesis, and polymerization. Some of its polymers are used in sewage and wastewater treatment, permanent press fabrics, and as soil conditioning agents.
Devices for accelerating charged particles in a spiral path by a constant-frequency alternating electric field. This electric field is synchronized with the movement of the particles in a constant magnetic field.
Methods for determining interaction between PROTEINS.
Drugs that are pharmacologically inactive but when exposed to ultraviolet radiation or sunlight are converted to their active metabolite to produce a beneficial reaction affecting the diseased tissue. These compounds can be administered topically or systemically and have been used therapeutically to treat psoriasis and various types of neoplasms.
Lipids, predominantly phospholipids, cholesterol and small amounts of glycolipids found in membranes including cellular and intracellular membranes. These lipids may be arranged in bilayers in the membranes with integral proteins between the layers and peripheral proteins attached to the outside. Membrane lipids are required for active transport, several enzymatic activities and membrane formation.
A technique using antibodies for identifying or quantifying a substance. Usually the substance being studied serves as antigen both in antibody production and in measurement of antibody by the test substance.
Methods of creating machines and devices.
The vapor state of matter; nonelastic fluids in which the molecules are in free movement and their mean positions far apart. Gases tend to expand indefinitely, to diffuse and mix readily with other gases, to have definite relations of volume, temperature, and pressure, and to condense or liquefy at low temperatures or under sufficient pressure. (Grant & Hackh's Chemical Dictionary, 5th ed)
Any of various animals that constitute the family Suidae and comprise stout-bodied, short-legged omnivorous mammals with thick skin, usually covered with coarse bristles, a rather long mobile snout, and small tail. Included are the genera Babyrousa, Phacochoerus (wart hogs), and Sus, the latter containing the domestic pig (see SUS SCROFA).
Filamentous proteins that are the main constituent of the thin filaments of muscle fibers. The filaments (known also as filamentous or F-actin) can be dissociated into their globular subunits; each subunit is composed of a single polypeptide 375 amino acids long. This is known as globular or G-actin. In conjunction with MYOSINS, actin is responsible for the contraction and relaxation of muscle.
Measurable and quantifiable biological parameters (e.g., specific enzyme concentration, specific hormone concentration, specific gene phenotype distribution in a population, presence of biological substances) which serve as indices for health- and physiology-related assessments, such as disease risk, psychiatric disorders, environmental exposure and its effects, disease diagnosis, metabolic processes, substance abuse, pregnancy, cell line development, epidemiologic studies, etc.
A large multisubunit protein complex found in the THYLAKOID MEMBRANE. It uses light energy derived from LIGHT-HARVESTING PROTEIN COMPLEXES to catalyze the splitting of WATER into DIOXYGEN and of reducing equivalents of HYDROGEN.
Expanded structures, usually green, of vascular plants, characteristically consisting of a bladelike expansion attached to a stem, and functioning as the principal organ of photosynthesis and transpiration. (American Heritage Dictionary, 2d ed)
Mixtures of many components in inexact proportions, usually natural, such as PLANT EXTRACTS; VENOMS; and MANURE. These are distinguished from DRUG COMBINATIONS which have only a few components in definite proportions.
The use of devices which use detector molecules to detect, investigate, or analyze other molecules, macromolecules, molecular aggregates, or organisms.
A technique of inputting two-dimensional images into a computer and then enhancing or analyzing the imagery into a form that is more useful to the human observer.
The phenomenon whereby compounds whose molecules have the same number and kind of atoms and the same atomic arrangement, but differ in their spatial relationships. (From McGraw-Hill Dictionary of Scientific and Technical Terms, 5th ed)
The chemical alteration of an exogenous substance by or in a biological system. The alteration may inactivate the compound or it may result in the production of an active metabolite of an inactive parent compound. The alterations may be divided into METABOLIC DETOXICATION, PHASE I and METABOLIC DETOXICATION, PHASE II.
Salts and esters of the 12-carbon saturated monocarboxylic acid--lauric acid.
The introduction of a phosphoryl group into a compound through the formation of an ester bond between the compound and a phosphorus moiety.
The first chemical element in the periodic table. It has the atomic symbol H, atomic number 1, and atomic weight [1.00784; 1.00811]. It exists, under normal conditions, as a colorless, odorless, tasteless, diatomic gas. Hydrogen ions are PROTONS. Besides the common H1 isotope, hydrogen exists as the stable isotope DEUTERIUM and the unstable, radioactive isotope TRITIUM.
A chromatography technique in which the stationary phase is composed of a non-polar substance with a polar mobile phase, in contrast to normal-phase chromatography in which the stationary phase is a polar substance with a non-polar mobile phase.
A trypanocidal agent and possible antiviral agent that is widely used in experimental cell biology and biochemistry. Ethidium has several experimentally useful properties including binding to nucleic acids, noncompetitive inhibition of nicotinic acetylcholine receptors, and fluorescence among others. It is most commonly used as the bromide.
The chemical and physical integrity of a pharmaceutical product.
Spectrophotometry in the infrared region, usually for the purpose of chemical analysis through measurement of absorption spectra associated with rotational and vibrational energy levels of molecules. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
The diversion of RADIATION (thermal, electromagnetic, or nuclear) from its original path as a result of interactions or collisions with atoms, molecules, or larger particles in the atmosphere or other media. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
The assembly of the QUATERNARY PROTEIN STRUCTURE of multimeric proteins (MULTIPROTEIN COMPLEXES) from their composite PROTEIN SUBUNITS.
Compounds formed by the joining of smaller, usually repeating, units linked by covalent bonds. These compounds often form large macromolecules (e.g., BIOPOLYMERS; PLASTICS).
The degree of similarity between sequences of amino acids. This information is useful for the analyzing genetic relatedness of proteins and species.
Genetically engineered MUTAGENESIS at a specific site in the DNA molecule that introduces a base substitution, or an insertion or deletion.
The relationship between the chemical structure of a compound and its biological or pharmacological activity. Compounds are often classed together because they have structural characteristics in common including shape, size, stereochemical arrangement, and distribution of functional groups.
Europium. An element of the rare earth family of metals. It has the atomic symbol Eu, atomic number 63, and atomic weight 152. Europium is used in the form of its salts as coatings for cathode ray tubes and in the form of its organic derivatives as shift reagents in NMR spectroscopy.
The process of moving proteins from one cellular compartment (including extracellular) to another by various sorting and transport mechanisms such as gated transport, protein translocation, and vesicular transport.
A purine that is an isomer of ADENINE (6-aminopurine).

Relocating the active site of activated protein C eliminates the need for its protein S cofactor. A fluorescence resonance energy transfer study. (1/12106)

The effect of replacing the gamma-carboxyglutamic acid domain of activated protein C (APC) with that of prothrombin on the topography of the membrane-bound enzyme was examined using fluorescence resonance energy transfer. The average distance of closest approach (assuming kappa2 = 2/3) between a fluorescein in the active site of the chimera and octadecylrhodamine at the membrane surface was 89 A, compared with 94 A for wild-type APC. The gamma-carboxyglutamic acid domain substitution therefore lowered and/or reoriented the active site, repositioning it close to the 84 A observed for the APC. protein S complex. Protein S enhances wild-type APC cleavage of factor Va at Arg306, but the inactivation rate of factor Va Leiden by the chimera alone is essentially equal to that by wild-type APC plus protein S. These data suggest that the activities of the chimera and of the APC.protein S complex are equivalent because the active site of the chimeric protein is already positioned near the optimal location above the membrane surface to cleave Arg306. Thus, one mechanism by which protein S regulates APC activity is by relocating its active site to the proper position above the membrane surface to optimize factor Va cleavage.  (+info)

Mapping the functional domains of BRCA1. Interaction of the ring finger domains of BRCA1 and BARD1. (2/12106)

Breast cancer 1 (BRCA1) and BRCA1-associated RING domain 1 (BARD1) are multidomain proteins that interact in vivo via their N-terminal RING finger motif regions. To characterize functional aspects of the BRCA1/BARD1 interaction, we have defined the structural domains required for the interaction, as well as their oligomerization state, relative stability, and possible nucleic acid binding activity. We have found that the RING finger motifs do not themselves constitute stable structural domains but are instead part of larger domains comprising residues 1-109 of BRCA1 and residues 26-119 of BARD1. These domains exist as homodimers and preferentially form a stable heterodimer. Shorter BRCA1 RING finger constructs do not interact with BARD1 or with longer BRCA1 constructs, indicating that the heterodimeric and homodimer interactions are mediated by regions outside the canonical RING finger motif. Nucleic acid binding is a generally proposed function of RING finger domains. We show that neither the homodimers nor the heterodimer displays affinity for nucleic acids, indicating that the proposed roles of BRCA1 and BARD1 in DNA repair and/or transcriptional activation must be mediated either by other regions of the proteins or by additional cofactors.  (+info)

Tolerance of a protein to multiple polar-to-hydrophobic surface substitutions. (3/12106)

Hydrophobic substitutions at solvent-exposed positions in two alpha-helical regions of the bacteriophage P22 Arc repressor were introduced by combinatorial mutagenesis. In helix A, hydrophobic residues were tolerated individually at each of the five positions examined, but multiple substitutions were poorly tolerated as shown by the finding that mutants with more than two additional hydrophobic residues were biologically inactive. Several inactive helix A variants were purified and found to have reduced thermal stability relative to wild-type Arc, with a rough correlation between the number of polar-to-hydrophobic substitutions and the magnitude of the stability defect. Quite different results were obtained in helix B, where variants with as many as five polar-to-hydrophobic substitutions were found to be biologically active and one variant with three hydrophobic substitutions had a t(m) 6 degrees C higher than wild-type. By contrast, a helix A mutant with three similar polar-to-hydrophobic substitutions was 23 degrees C less stable than wild-type. Also, one set of three polar-to-hydrophobic substitutions in helix B was tolerated when introduced into the wild-type background but not when introduced into an equally active mutant having a nearly identical structure. Context effects occur both when comparing different regions of the same protein and when comparing the same region in two different homologues.  (+info)

Folding of apocytochrome c induced by the interaction with negatively charged lipid micelles proceeds via a collapsed intermediate state. (4/12106)

Unfolded apocytochrome c acquires an alpha-helical conformation upon interaction with lipid. Folding kinetic results below and above the lipid's CMC, together with energy transfer measurements of lipid bound states, and salt-induced compact states in solution, show that the folding transition of apocytochrome c from the unfolded state in solution to a lipid-inserted helical conformation proceeds via a collapsed intermediate state (I(C)). This initial compact state is driven by a hydrophobic collapse of the polypeptide chain in the absence of the heme group and may represent a heme-free analogue of an early compact intermediate detected on the folding pathway of cytochrome c in solution. Insertion into the lipid phase occurs via an unfolding step of I(C) through a more extended state associated with the membrane surface (I(S)). While I(C) appears to be as compact as salt-induced compact states in solution with substantial alpha-helix content, the final lipid-inserted state (Hmic) is as compact as the unfolded state in solution at pH 5 and has an alpha-helix content which resembles that of native cytochrome c.  (+info)

Esterases in serum-containing growth media counteract chloramphenicol acetyltransferase activity in vitro. (5/12106)

The spirochete Borrelia burgdorferi was unexpectedly found to be as susceptible to diacetyl chloramphenicol, the product of the enzyme chloramphenicol acetyltransferase, as it was to chloramphenicol itself. The susceptibilities of Escherichia coli and Bacillus subtilis, as well as that of B. burgdorferi, to diacetyl chloramphenicol were then assayed in different media. All three species were susceptible to diacetyl chloramphenicol when growth media were supplemented with rabbit serum or, to a lesser extent, human serum. Susceptibility of E. coli and B. subtilis to diacetyl chloramphenicol was not observed in the absence of serum, when horse serum was used, or when the rabbit or human serum was heated first. In the presence of 10% rabbit serum, a strain of E. coli bearing the chloramphenicol acetyltransferase (cat) gene had a fourfold-lower resistance to chloramphenicol than in the absence of serum. A plate bioassay for chloramphenicol activity showed the conversion by rabbit, mouse, and human sera but not bacterial cell extracts or heated serum of diacetyl chloramphenicol to an inhibitory compound. Deacetylation of acetyl chloramphenicol by serum components was demonstrated by using fluorescent substrates and thin-layer chromatography. These studies indicate that esterases of serum can convert diacetyl chloramphenicol back to an active antibiotic, and thus, in vitro findings may not accurately reflect the level of chloramphenicol resistance by cat-bearing bacteria in vivo.  (+info)

Morphological behavior of acidic and neutral liposomes induced by basic amphiphilic alpha-helical peptides with systematically varied hydrophobic-hydrophilic balance. (6/12106)

Lipid-peptide interaction has been investigated using cationic amphiphilic alpha-helical peptides and systematically varying their hydrophobic-hydrophilic balance (HHB). The influence of the peptides on neutral and acidic liposomes was examined by 1) Trp fluorescence quenched by brominated phospholipid, 2) membrane-clearing ability, 3) size determination of liposomes by dynamic light scattering, 4) morphological observation by electron microscopy, and 5) ability to form planar lipid bilayers from channels. The peptides examined consist of hydrophobic Leu and hydrophilic Lys residues with ratios 13:5, 11:7, 9:9, 7:11, and 5:13 (abbreviated as Hels 13-5, 11-7, 9-9, 7-11, and 5-13, respectively; Kiyota, T., S. Lee, and G. Sugihara. 1996. Biochemistry. 35:13196-13204). The most hydrophobic peptide (Hel 13-5) induced a twisted ribbon-like fibril structure for egg PC liposomes. In a 3/1 (egg PC/egg PG) lipid mixture, Hel 13-5 addition caused fusion of the liposomes. Hel 13-5 formed ion channels in neutral lipid bilayer (egg PE/egg PC = 7/3) at low peptide concentrations, but not in an acidic bilayer (egg PE/brain PS = 7/3). The peptides with hydrophobicity less than Hel 13-5 (Hels 11-7 and Hel 9-9) were able to partially immerse their hydrophobic part of the amphiphilic helix in lipid bilayers and fragment liposome to small bicelles or micelles, and then the bicelles aggregated to form a larger assembly. Peptides Hel 11-7 and Hel 9-9 each formed strong ion channels. Peptides (Hel 7-11 and Hel 5-13) with a more hydrophilic HHB interacted with an acidic lipid bilayer by charge interaction, in which the former immerses the hydrophobic part in lipid bilayer, and the latter did not immerse, and formed large assemblies by aggregation of original liposomes. The present study clearly showed that hydrophobic-hydrophilic balance of a peptide is a crucial factor in understanding lipid-peptide interactions.  (+info)

Localization and environment of tryptophans in soluble and membrane-bound states of a pore-forming toxin from Staphylococcus aureus. (7/12106)

The location and environment of tryptophans in the soluble and membrane-bound forms of Staphylococcus aureus alpha-toxin were monitored using intrinsic tryptophan fluorescence. Fluorescence quenching of the toxin monomer in solution indicated varying degrees of tryptophan burial within the protein interior. N-Bromosuccinimide readily abolished 80% of the fluorescence in solution. The residual fluorescence of the modified toxin showed a blue-shifted emission maximum, a longer fluorescence lifetime as compared to the unmodified and membrane-bound alpha-toxin, and a 5- to 6-nm red edge excitation shift, all indicating a restricted tryptophan environment and deeply buried tryptophans. In the membrane-bound form, the fluorescence of alpha-toxin was quenched by iodide, indicating a conformational change leading to exposure of some tryptophans. A shorter average lifetime of tryptophans in the membrane-bound alpha-toxin as compared to the native toxin supported the conclusions based on iodide quenching of the membrane-bound toxin. Fluorescence quenching of membrane-bound alpha-toxin using brominated and spin-labeled fatty acids showed no quenching of fluorescence using brominated lipids. However, significant quenching was observed using 5- and 12-doxyl stearic acids. An average depth calculation using the parallax method indicated that the doxyl-quenchable tryptophans are located at an average depth of 10 A from the center of the bilayer close to the membrane interface. This was found to be in striking agreement with the recently described structure of the membrane-bound form of alpha-toxin.  (+info)

Photophysical analysis of class I major histocompatibility complex protein assembly using a xanthene-derivatized beta2-microglobulin. (8/12106)

Spectral changes and a sixfold increase in the emission intensity were observed in the fluorescence of a single xanthene probe (Texas red) attached to beta2m-microglobulin (beta2m) upon assembly of beta2m into a ternary complex with mouse H-2Kd heavy chain and influenza nuclear protein peptide. Dissociation of the labeled beta2m from the ternary complex restored the probe's fluorescence and absorption spectra and reduced the emission intensity. Thus changes in xanthene probe fluorescence upon association/dissociation of the labeled beta2m molecule with/from the ternary complex provide a simple and convenient method for studying the assembly/dissociation mechanism of the class I major histocompatibility complex (MHC-I) encoded molecule. The photophysical changes in the probe can be accounted for by the oligomerization of free labeled beta2m molecules. The fluorescence at 610 nm is due to beta2m dimers, where the probes are significantly separated spatially so that their emission and excitation properties are close to those of xanthene monomers. Fluorescence around 630 nm is due to beta2m oligomers where xanthene probes interact. Minima in the steady-state excitation (550 nm) and emission (630 nm) anisotropy spectra correlate with the maxima of the high-order oligomer excitation and emission spectra, showing that their fluorescence is more depolarized. These photophysical features are explained by splitting of the first singlet excited state of interacting xanthene probes that can be modeled by exciton theory.  (+info)

BAVILI TABRIZI, Ahad y DEHGHANI TEYMURLOUIE, Nadereh. Application of Sodium Dodecyl Sulfate Coated Iron Oxide Magnetic Nanoparticles for the Extraction and Spectrofluorimetric Determination of Propranolol in Different Biological Samples. J. Mex. Chem. Soc [online]. 2016, vol.60, n.3, pp.108-116. ISSN 1870-249X.. A new analytical approach was developed involving magnetic solid-phase extraction (MSPE) and spectrofluorimetric determination of propranolol (PRO) in biological fluids. A urine or plasma sample was prepared and adjusted to pH 3-4, then PRO was quickly extracted using Fe3O4 magnetic nanoparticles (MNPs) modified by the surfactant sodium dodecyl sulfate (SDS) and determined applying spectrofluorimetry. Experimental conditions, such as the amount of MNPs and SDS, pH value, standing time, desorption solvent and maximal extraction volume have been adjusted to optimize the extraction process and to obtain analytical characteristics of the method. Linearity was observed in the analytes ...
TY - JOUR. T1 - Multispectral scanning time-resolved fluorescence spectroscopy (TRFS) technique for intravascular diagnosis. AU - Xie, Hongtao. AU - Bec, Julien. AU - Liu, Jing. AU - Sun, Yang. AU - Lam, Matthew. AU - Yankelevich, Diego R.. AU - Marcu, Laura. PY - 2012/7/1. Y1 - 2012/7/1. N2 - This study describes a scanning time-resolved fluorescence spectroscopy (TRFS) system designed to continuously acquire fluorescence emission and to reconstruct fluorescence lifetime images (FLIM) from a luminal surface by using a catheter-based optical probe with rotary joint and pull-back device. The ability of the system to temporally and spectrally resolve the fluorescence emission from tissue was validated using standard dyes and tissue phantoms (e.g., ex vivo pig aorta phantom). Current results demonstrate that this system is capable to reliably resolve the fluorescence emission of multiple fluorophores located in the lumen; and suggest its potential for intravascular detection of distinct biochemical ...
A rapid, simple and sensitive synchronous specrtofluorimetric method has been developed for the simultaneous analysis of binary mixture of metoprolol (MTP) and felodipine (FDP). The method is based upon measurement of the synchronous fluorescence intensity of the two drugs at Δλ of 70 nm in aqueous solution. The different experimental parameters affecting the synchronous fluorescence intensities of the two drugs were carefully studied and optimized. The fluorescence intensity-concentration plots were rectilinear over the ranges of 0.5-10 μg/mL and 0.2-2 μg/mL for MTP and FDP, respectively. The limits of detection were 0.11 and 0.02 μg/mL and quantification limits were 0.32 and 0.06 μg/mL for MTP and FDP, respectively. The proposed method was successfully applied for the determination of the two compounds in their commercial tablets and the results obtained were favorably compared to those obtained with a comparison method.
The paper reviewed the application these years of fluorescence spectrophotometry in environmental monitoring.The content includes the principle,the establishment of methods,the study of fluorescence system and the development of the combination with other techniques. It indicated that fluorescence method is sensitive, selective, less sample using and simple. It is an effective way for the analysis of trace elements and substances in complicated environmental samples. It will have a broad prospect in environmental analysis with the combination with other techniques.
TY - JOUR. T1 - Steady-state and time-resolved fluorescence spectroscopic studies on interaction of the N-terminal region with the hairpin loop of the phytocystain Scb. AU - Doi-Kawano, Keiko. AU - Nishimoto, Etsuko. AU - Kouzuma, Yoshiaki. AU - Takahashi, Daisuke. AU - Yamashita, Shoji. AU - Kimura, Makoto. PY - 2009/7/1. Y1 - 2009/7/1. N2 - The steady-state and time-resolved fluorescece spectroscopy is one of the most powerful method to detect and analyze subtle conformation change and interaction between peptide elements in protein. Phytocystatin Scb isolated from sunflower seeds includes a single Trp residue at position 85. In an attempt to investigate the interaction of the N-terminal region of Scb with the first and second hairpin loops by fluorescence spectroscopy of Trp residue, two Scb mutants in which single Trp locates at position 52 and 58, respectively, and their N-terminal removed mutants were generated. The N-terminal truncation changed the fluorescence decay kinetics of Trp52 ...
TY - JOUR. T1 - Fluorescence correlation spectroscopy of finite-sized particles. AU - Wu, Bin. AU - Chen, Yan. AU - Müller, Joachim D.. PY - 2008/4. Y1 - 2008/4. N2 - A theory is presented to study fluorescence correlation spectroscopy for particles with size comparable to the beam waist of the observation volume. Analytical correlation curves are derived for some experimentally interesting particle geometries. It is found that the finiteness of the particle generally decreases the value of the correlation amplitude and increases the correlation time compared to a point particle model. Furthermore, not only the size but also the distribution of fluorophores affects the shape of the correlation function. This is experimentally demonstrated with surface and internally labeled fluorescent spheres. In addition, experiments are performed on fluorescent spheres of different radii to validate the model by comparing the results to theoretical predictions.. AB - A theory is presented to study ...
TY - JOUR. T1 - Detection of Pentosidine Cross-Links in Cell-Secreted Decellularized Matrices Using Time Resolved Fluorescence Spectroscopy. AU - Mitra, Debika. AU - Fatakdawala, Hussain. AU - Nguyen-Truong, Michael. AU - Creecy, Amy. AU - Nyman, Jeffry. AU - Marcu, Laura. AU - Leach, Jonathan K. PY - 2017/9/11. Y1 - 2017/9/11. N2 - Hyperglycemia-mediated, nonenzymatic collagen cross-links such as pentosidine (PENT) can have deleterious effects on cellular interactions with the extracellular matrix (ECM). Present techniques to quantify PENT are limited, motivating the need for improved methods to study the accumulation and contribution of PENT toward diabetic clinical challenges such as impaired bone healing. Current methods for studying PENT are destructive, laborious, and frequently employ oversimplified collagen films that lack the complexity of the native ECM. The primary goal of this study was to evaluate the capacity of time-resolved fluorescence spectroscopy (TRFS) to detect PENT in ...
We compared various spectroscopic properties of a norfloxacin-single stranded DNA complex with those of norfloxacin-double stranded DNA complex. Norfloxacin binds to both double- and single stranded DNA, and we observed the following spectroscopic changes for both complexes: hypochromism in the norfloxacin absorption region in the absorption spectrum, the characteristic induced CD spectrum consisting of a weak positive band at 323 nm and a strong positive band at 280-300 nm followed by a negative band in the 260 nm region, a strong decrease in the fluorescence intensity and a red-shift in the fluorescence emission spectrum, and shorter fluorescence decay times. These results indicate that the environments of the bound norfloxacin in both DNAs are similar, although the equilibrium constant of the norfloxacin-single stranded DNA was twice as high as the norfloxacin-double stranded DNA complex. Both complexes were thermodynamically favored with similar negative ΔGo. Negative ΔHo terms contribute ...
Berland, K.M., So, P.T., Gratton, E. 1995. Two-photon fluorescence correlation spectroscopy: method and application to the intracellular environment. Biophys J. 68(2):694-701. PubMed. Chen Y, Müller JD, So PTC, Gratton E. 1999. The photon counting histogram in fluorescence fluctuation spectroscopy. Biophys J. 77: 553-567. PubMed. Elson EL. 2001. Fluorescence correlation spectroscopy measures molecular transport in cells. Traffic 2(11):789-96. PubMed. Elson EL, Magde D. 1974. Fluorescence correlation spectroscopy. I. Conceptual basis and theory. Biopolymers, 13(1):1-27. Kask P, Palo K, Ullmann D and Gall K. 1999. Fluorescence-intensity distribution analysis and its application in biomolecular detection technology. Proc Natl Acad Sci USA 96:13756-13761. PubMed Kis-Petikova K, Chen Y, Müeller JD, Gratton E. 2000. Application of scanning fluorescent correlation spectroscopy for determination of particle shape. Biophys. J., 78(1), 2603. Koppel DE, Axelrod D, Schlessinger J, Elson EL, Webb WW. 1976. ...
291309859 - EP 1259805 A1 2002-11-27 - LIPOPROTEIN ASSAY - [origin: WO0153829A1] A method of assaying to determine the identity and/or concentration or relative concentration in a sample solution of a particular one of a number of different target molecule types, comprise the steps of: i) adding to the sample a probe substance which binds to the or each target molecule type and which when so bound fluoresces under appropriate excitation; ii) performing a time-resolved fluorescence measurement on the sample; and iii) making said determination from analysis of the time decay data obtained from said time-resolved fluorescence measurement.[origin: WO0153829A1] A method of assaying to determine the identity and/or concentration or relative concentration in a sample solution of a particular one of a number of different target molecule types, comprise the steps of: i) adding to the sample a probe substance which binds to the or each target molecule type and which when so bound fluoresces under appropriate
The detailed analysis of the processes of electronic energy relaxation in a substance, taking place after the short optical impulses of excitation, shows that mathematical models of the detected optical intensity decay can not be expressed by a combination of elementary mathematical functions. In the present work we suggest the approach to the parameter estimation of the decay curves, obtained from the time-resolved fluorescence experiments, based on the computer simulation methods. By means of simulation elementary processes of energy relaxation can be reproduced with the highest level of the detailed elaboration. Given processes are characterized by a set of parameters which have to be estimated. For the estimation we tried several methods, which do not require calculation of the derivatives, as in widespread Marquardt algorithm, that could be difficult for the decay curves, represented by a simulation model. The main advantage of the proposed approach is that it is possible to estimate the ...
Article Three-dimensional excitation emission matrix fluorescence spectroscopy and gel-permeating chromatography to characterize extracellular polymeric substances in aerobic granulation. Three-dimensional excitation emission matrix (EEM) fluorescenc...
Steady State Spectrofluorometer from HORIBA Scientific. The FluoroLog-3, a modular instrument, is the Worlds Most Sensitive Spectrofluorometer
Fluorescence correlation spectroscopy (FCS) is a very useful tool for examining mobility and interactions in a variety of systems including membranes. FCS is highly sensitive to small differences in the diffusion rates of proteins and lipids, which allows for instance to characterize differences in phase behavior of lipid bilayers. FCS is used to analyze the binding of diffusible ligands to membrane receptors, such as membrane proteins or glycolipids. Changes in the fluorescence brightness parameter reveal membrane protein oligomerization. Moreover, the use of dual-color fluorescence cross-correlation (dcFCCS) allows to assess protein-protein binding in cases, where binding does not lead to significant changes in diffusion rates. The dual-color cross-correlation technique can also be employed to detect dynamic co-localization of labeled cargo molecules in small, mobile carriers, such as transport vesicles. Owing to the use of fluorescent labels, FCS is highly specific and can be applied both to ...
In flow cytometry, the fluorescence decay time of an excitable species has been largely underutilized and is not likely found as a standard parameter on any imaging cytometer, sorting, or analyzing system
Nanosecond time-resolved emission spectral techniques have been applied to the problem of the origin and nature of the well-known temperature-dependent spectral shifts characteristic of the aminophthalimides in alcohol solvents. It is demonstrated that the temperature-dependent spectral shifts are in fact due to time-dependent spectral shifts. At least two relaxation times characterize this phenomenon. One relaxation time is observed to be subnanosecond in character and may be associated with the exciplex that presumably is present in the system. The other relaxation time is presumably associated with the non-specific dipolar reorientation although it has distinctly different characteristics from the solvent dielectric relaxation time. Wavelength-dependent fluorescence decay that can be explained by the time dependence of the emission spectrum is also observed. (Author)(*IMIDES
Department of Biological Sciences, Texas Tech University, Lubbock 79409, USA. [email protected] The function of Lhca4, a gene encoding the photosystem 1 type IV chlorophyll a/b-binding protein complex in Arabidopsis, was investigated using antisense technology. Lhca4 protein was reduced in a number of mutant lines and abolished in one. The inhibition of protein was not correlated with the inhibition of mRNA. No depletion of Lhca1 was observed, but the low-temperature fluorescence emission spectrum was drastically altered in the mutants. The emission maximum was blue-shifted by 6 nm, showing that chlorophyll molecules bound to Lhca4 are responsible for most of the long-wavelength fluorescence emission. Some mutants also showed an unexplainable delay in flowering time and an increase in seed weight.. MeSH Terms ...
To understand the function of cellular protein networks, spatial and temporal context is essential. Fluorescence correlation spectroscopy (FCS) is a single-molecule method to study the abundance, mobility and interactions of fluorescence-labeled biomolecules in living cells. However, manual acquisition and analysis procedures have restricted live-cell FCS to short-term experiments of a few proteins. Here, we present high-throughput (HT)-FCS, which automates screening and time-lapse acquisition of FCS data at specific subcellular locations and subsequent data analysis. We demonstrate its utility by studying the dynamics of 53 nuclear proteins. We made 60,000 measurements in 10,000 living human cells, to obtain biophysical parameters that allowed us to classify proteins according to their chromatin binding and complex formation. We also analyzed the cell-cycle-dependent dynamics of the mitotic kinase complex Aurora B/INCENP and showed how a rise in Aurora concentration triggers two-step complex ...
Background: The accumulation of fibrillar deposits of amyloid beta-peptide (A beta) in brain parenchyma and cerebromeningeal blood vessels is a key step in the pathogenesis of Alzheimers disease. In this report, polymerization of A beta was studied using fluorescence correlation spectroscopy (FCS), a technique capable of detecting small molecules and large aggregates simultaneously in solution. Results: The polymerization of A beta dissolved in Tris-buffered saline, pH 7.4, occurred above a critical concentration of 50 mu M and proceeded from monomers/dimers into two discrete populations of large aggregates, without any detectable amount of oligomers. The aggregation showed very high cooperativity and reached a maximum after 40 min, followed by an increase in the amount of monomers/dimers and a decrease in the size of the large aggregates. Electron micrographs of samples prepared at the time for maximum aggregation showed a mixture of an amorphous network and short diffuse fibrils, whereas only ...
The retinoic acid receptor (RAR) is a member of the nuclear receptor superfamily. This ligand‐inducible transcription factor binds to DNA as a heterodimer with the retinoid X receptor (RXR) in the nucleus. The nucleus is a dynamic compartment and live‐cell imaging techniques make it possible to investigate transcription factor action in real‐time. We studied the diffusion of EGFP-RAR by fluorescence correlation spectroscopy (FCS) to uncover the molecular interactions determining receptor mobility. In the absence of ligand, we identified two distinct species with different mobilities. The fast component has a diffusion coefficient of D1 = 1.8−6.0 µm2/second corresponding to small oligomeric forms, whereas the slow component with D2 = 0.05−0.10 µm2/second corresponds to interactions of RAR with the chromatin or other large structures. The RAR ligand‐binding‐domain fragment also has a slow component, probably as a result of indirect DNA‐binding through RXR, with lower affinity ...
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We report a novel, compact and automated multidimensional spectrofluorometer that exploits a fibre-laser-pumped ultrafast supercontinuum source to provide resolution with respect to intensity, excitation and emission wavelength, decay time and polarisation. This instrument has been applied to study the photophysics of the phase-sensitive membrane probe di-4-ANEPPDHQ and to characterise protein-protein interactions via Förster resonance energy transfer. It can be applied to in situ measurements via a fibre-optic probe in medical and other contexts and is demonstrated here to provide a comprehensive characterisation of tissue autofluorescence.
We demonstrate a smartphone-integrated handheld detection instrument capable of utilizing the internal rear-facing camera as a high-resolution spectrometer for measuring the colorimetric absorption spectrum, fluorescence emission spectrum, and resonant reflection spectrum from a microfluidic cartridge insert
Rhodopsin self-associates in the plasma membrane. At low concentrations, the interactions are consistent with a monomer-dimer equilibrium (Comar et al., J Am Chem Soc 136(23):8342-8349, 2014). At high
Metallic nano-antennas provide strong field confinement and intensity enhancement in hotspots and thus can ultimately enhance fluorescence detection and provide ultra small detection volumes. In solution-based fluorescence measurements, the diffraction limited focus driving the nano-antenna can outshine the fluorescence originating from the hotspot and thus render the benefits of the hotspot negligible. We introduce a model to calculate the effect of a nano-antenna, or any other object creating a nontrivial intensity distribution, for fluorescence fluctuation measurements. Approximating the local field enhancement of the nano-antenna by a 3D Gaussian profile, we show which hotspot sizes and intensities are the most beneficial for an FCS measurement and compare it to realistic antenna parameters from literature.. © 2014 Optical Society of America. Full Article , PDF Article ...
Read independent reviews on NANOPHOX - Photon Cross-correlation Spectroscopy for size and stability analysis of nano-suspensions and emulsions from 1 nm to 10,000 nm from Sympatec GmbH on SelectScience
Transmembrane domains (TMD) connect the inner with the outer world of a living cell. Single TMD containing (bitopic) receptors are of particular interest, because their oligomerization seems to be a common activation mechanism in cell signaling. We analyzed the composition of TMDs in bitopic proteins within the proteomes of 12 model organisms. The average number of strongly polar and charged residues decreases during evolution, while the occurrence of a dimerization motif, GxxxG, remains unchanged. This may reflect the avoidance of unspecific binding within a growing receptor interaction network. In addition, we propose a new experimental approach for studying helix-helix interactions in giant plasma membrane vesicles using scanning fluorescence cross-correlation spectroscopy. Measuring eGFP/mRFP tagged versions of cytokine receptors confirms the homotypic interactions of the erythropoietin receptor in contrast to the Interleukin-4 receptor chains. As a proof of principle, by swapping the TMDs, ...
This invention relates to a diagnostic apparatus and particularly to an apparatus for the diagnosis of malignant tumor and the method of using the apparatus for diagnosis. The apparatus employs an ultraviolet light source with an emitting waveband of 3000A-4000A. Light from the light source is transmitted through a bundle of quartz optic fibers to the surface of the tumor, whether benign or malignant, to stimulate it, which then generates a specific intrinsic fluorescence spectrum. The intrinsic fluorescence spectrum reflected from the surface of the tumor is transmitted by a second bundles of glass fibers placed near it to a color resolution means, then processed by a scanning means and a circuit means, and displayed recorded by a display recording means. The display may be a graphic presentation of the intrinsic fluorescence spectrum of the tumor that is tested. If the graphic presentation displayed includes a single peak within the range of the blue color band, it indicates that the tumor being
Abstract A study of the photoluminescence excitation spectrum in a crystal of mercury diiodide is reported. Each of the two luminescence bands peaking at 543 and 572-575 nm investigated was found to have its own excitation spectrum. The excitation spectrum of the 575-nm line in the... mehr ...
Fast and non-invasive, diagnostic techniques based on fluorescence spectroscopy have the potential to link the biochemical and morphologic properties of tissues to individual patient care. One of the most widely explored applications of fluorescence spectroscopy is the detection of endoscopically invisible, early neoplastic growth in epithelial tissue sites. Currently, there are no effective diagnostic techniques for these early tissue transformations. If fluorescence spectroscopy can be applied successfully as a diagnostic technique in this clinical context, it may increase the potential for curative treatment, and thus, reduce complications and health care costs. Steady-state, fluorescence measurements from small tissue regions as well as relatively large tissue fields have been performed. To a much lesser extent, time-resolved, fluorescence measurements have also been explored for tissue characterization. Furthermore, sources of both intrinsic (endogenous fluorophores) and extrinsic ...
TY - JOUR. T1 - Highly photostable ketopyrrolyl-BODIPYs with red aggregation-induced emission characteristics for ultrafast wash-free mitochondria-targeted bioimaging. AU - Wu, Hao. AU - Guo, Xing. AU - Yu, Changjiang. AU - Wong, Wai Yeung. AU - Hao, Erhong. AU - Jiao, Lijuan. PY - 2020/5. Y1 - 2020/5. N2 - Subcellular organelle-specific probes, including mitochondria-targeted fluorescent probes, have attracted enormous research interests because they can monitor or visualize the morphology or biological activities of specific organelles and play an indispensable role in disease diagnosis. To follow the process, highly specific and photostable fluorescent probes are in demand. However, commercially available mitochondria probes normally suffer from poor photostability under laser irradiation and aggregation caused quenching (ACQ) in the aggregate state. In this work, two simple aggregation-induced emission(AIE)-active meso-2-ketopyrrolyl BODIPYs were developed via a convenient one-pot synthetic ...
There are various fluorescent probes such as ANS (anilinonapthalene 8-sulphonate) and N-methyl-2-anilino-6-naphthalene sulphonate (MNS). They both contain charged and hydrophobic areas and therefore are situated at the water-lipid interface of the membrane. The fluorescent properties of the molecule vary with its mobility and also with the polarity of the environment. Studies with the ANS probe has shown that structural changes occur in mitochondrial membrane during oxidative phosphorylation. These probes have also helped in giving information about the structural features of the plasma membrane. ...
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Single-molecule fluorescence spectroscopy and super-resolution microscopy are important elements of the ongoing technical revolution to reveal biochemical and cellular processes in unprecedented clarity and precision. Demands placed on the photophysical properties of the fluorophores are stringent a …
A new imaging contrast agent is reported that provides an increased fluorescent signal upon application of ultrasound (US). Liposomes containing lipids labelled with pyrene were optically excited and the excimer fluorescence emission intensity was detected in the absence and presence of an ultrasound field using an acousto-fluorescence setup. The acousto-fluorescence dynamics of liposomes containing lipids with pyrene labelled on the fatty acid tail group (PyPC) and the head group (PyPE) were compared. An increase in excimer emission intensity following exposure to US was observed for both cases studied. The increased intensity and time constants were found to be different for the PyPC and PyPE systems, and dependent on the applied US pressure and exposure time. The greatest change in fluorescence intensity (130%) and smallest rise time constant (0.33 s) are achieved through the use of PyPC labelled liposomes. The mechanism underlying the observed increase of the excimer emission intensity in ...
Calcium ions play an important role in cell function, acting as effectors and/or signaling molecules for a variety of cellular biochemical and physiological processes. The development of a variety of Ca2+-sensitive fluorescent indicators and advancements in imaging technology have enhanced the ability to follow both global and localized changes in intracellular Ca2+ at ever improving temporal and spatial resolution. Ratiometric Ca2+ indicators like fura-2 permit the measurement of intracellular Ca2+ concentration (Grynkiewicz et al., 1985). But, they tend to have a limited dynamic range and a significant fluorescence background, which reduce their sensitivity to small local increases in Ca2+. On the other hand, certain nonratiometric Ca2+ indicators, such as fluo-3, although not able to give a dynamic direct read-out of the Ca2+ concentration, have very low fluorescence when not bound to Ca2+ and have a significant increase in fluorescence intensity upon binding Ca2+ (e.g., ∼200 times for ...
This thesis describes the development of sensitive and high-resolution fluorescence spectroscopic and microscopic techniques and their application to probe biomolecules and their interactions in solution, lipid membrane model systems and in cells. Paper I-IV are largely focused on methodological developments. In paper I, a new fluorescence method based on fluorescence correlation spectroscopy (FCS) for detecting single particles was realized, requiring no fluorescent labeling of the particles. The method can yield information both about the diffusion properties of the particles as well as about their volumes. In paper II, a modified fluorescence cross correlation spectroscopy procedure with well characterized instrumental calibration was developed and applied to study cis interactions between an inhibitory receptor and its Major Histocompatibility Complex class I ligand molecule, both within the same cellular membranes. The quantitative analysis brought new insights into the Nature killer cells ...
Some APC-Cy7 conjugates show changes in their emission spectra with prolonged exposure to paraformaldehyde. For instruments equipped with a 561 nm Yellow-Green laser, a 585/15 nm filter is recommended for detection. When making decisions about which fluorochromes to use in your experiments, youll want to know their relative emission spectra. APC (Allophycocyanin) spectrum - APC (Allophycocyanin) is ... excitation and emission wavelengths using the interactive Spectrum Viewer - A web application for viewing and comparing spectra of various fluorescent compounds. BV605 is a tandem fluorochrome that combines BD Horizon BV421 and an acceptor dye with emission at 605nm. APC-H7 conjugates provide greater stability in light and paraformaldehyde fixatives and have less spillover into the APC channel than APC-Cy7 conjugates. However, because of its peak emission at 667 nm, Alexa Fluor® 647 cannot be seen well by eye, and it cannot be excited optimally with a mercury lamp. BV650 is a tandem fluorochrome ...
The cell membrane is organized in to different structures and it has been difficult to visualize these structures since they are believed to possess sizes below the optical resolution limit. Hence the development of new tools probing the biophysical properties of membranes is necessary. Imaging FCS is one such tool which allows the measurement of mobility at contiguous locations on cell membranes of live cells by analyzing the autocorrelation functions. In this thesis, Imaging FCS is being extended to Imaging FCCS enabling one to calculate cross-correlations and to extract parameters from the same. The next part discusses methods to characterize organization of membranes. The last part describes the study of membrane proteins and anti-microbials carried out using Imaging FCS. Unlike single point FCS which yields only mobility, imaging FCS provides mobility and heterogeneity and proved to be a valuable biophysical tool to characterize the dynamics and organization of cell membranes ...
To enable not only long sequence read but also high throughput in a DNA sequencer, the single molecule sequencing method based on direct observation of processive DNA polymerization is very promising. In this method, only incorporated nucleotides labeled with fluorescent dye should be detected under high concentration of unreacted nucleotides. Enhanced local field produced by plasmonic nanostructure is very suitable for such application because of its small size of a few ten nanometers. We have fabricated platinum bowtie nanostructure arrays producing fluorescence enhancement and have evaluated the performance using two-photon photoluminescence and single molecule fluorescence measurements. To enable use of multicolor dye labeling, visible light excitation around 500 nm is preferable, so that gold well known as a plasmonic material cannot be used. We explored suitable materials comprehensively by electromagnetic simulation and consequently chose platinum. Observation of bright photoluminescence from Pt
The single-molecule spectroscopy group is engaged in the development of new methods of single-molecule fluorescence spectroscopy and related photon data analysis. By utilizing the developed methods, we investigate the complex behavior of biomolecular systems, such as proteins, nucleic acids, and lipid membranes. Through the integrated approach of laser spectroscopy, biophysical chemistry, and statistical data analysis, we pursue creating a new field of molecular science ...
PA-Mode Single Wavelength allows the detection and fusion of photoacoustic signals with detailed anatomical images. Using a tuneable near infrared laser, the subject is illuminated at the desired wavelength (680-970nm and 1200-2000nm*) in order to visualize chromophores such as hemoglobin, melanin, dyes and nanoparticles.
What is Fluorescence Spectroscopy? Fluorescence is a type of luminescence caused by photons exciting a molecule, raising it to an electronic excited state. Overview of what is fluorescence, what is a fluorescence spectrum, what materials exhibit fluorescence.
TY - JOUR. T1 - Radiative and non-radiative decays from the excited state of Ti3+ ions in oxide crystals. AU - Yamaga, M.. AU - Gao, Y.. AU - Rasheed, F.. AU - ODonnell, K. P.. AU - Henderson, B.. AU - Cockayne, B.. PY - 1990/11/1. Y1 - 1990/11/1. N2 - The fluorescence spectra of Ti3+ in Y3Al5O12 (YAG), Al2O3 (sapphire), YAlO3 (YAP) observed at 10 K are composed of zero-phonon lines accompanied by the broad vibronic sidebands. The temperature dependence of the fluorescence lifetime and of the total intensity of the broadband measured in YAG and Al2O3 indicate that the radiative decay times from the excited states are nearly constant in the range 10-300 K. This demonstrates that the broadband radiative emissions in Ti3+:YAG and Ti3+:Al2O3 are due to magnetic dipole transitions or to electric dipole transitions induced by static odd-parity distortion, respectively. The decrease of the fluorescence lifetime with increasing temperature in Ti3+:YAG and Ti3+:Al2O3 is due to non-radiative decay from ...
TY - JOUR. T1 - Andreev bound states at the onset of phase coherence in Bi2Sr2CaCu2O8. AU - Aubin, H.. AU - Greene, L. H.. AU - Jian, Sha. AU - Hinks, D. G.. PY - 2002/10/21. Y1 - 2002/10/21. N2 - A study of Bi2212/CaF2/Ag planar tunnel junctions realized on crystallographic faces parallel to the c axis of Bi2212 single crystals was performed. Data show that the low energy excitation spectrum depends on the crystallographic orientation of the exposed surfaces of the sample, with a predominant ZBCP. The ZBCP appeared simultaneously with the establishment of the bulk superconducting phase coherence.. AB - A study of Bi2212/CaF2/Ag planar tunnel junctions realized on crystallographic faces parallel to the c axis of Bi2212 single crystals was performed. Data show that the low energy excitation spectrum depends on the crystallographic orientation of the exposed surfaces of the sample, with a predominant ZBCP. The ZBCP appeared simultaneously with the establishment of the bulk superconducting phase ...
Quantifying Gene Expression and Regulation in Living Cells by Fluorescence Fluctuation Imaging2017-01-112017-01-11Department of Biochemistry and Molecular Biology , CSU200px200px ...
Fluorophores currently used as fluorescent probes offer sufficient permutations of wavelength range, Stokes shift and spectral bandwidth to meet requirements imposed by instrumentation (e.g., 488 nm excitation), while allowing flexibility in the design of multicolor labeling experiments. Our online Fluorescence SpectraViewer (www.invitrogen.com/handbook/spectraviewer) provides an interactive utility for evaluating these factors during the experimental design process (Using the Fluorescence SpectraViewer-Note 23.1). The fluorescence output of a given dye depends on the efficiency with which it absorbs and emits photons, and its ability to undergo repeated excitation/emission cycles. Absorption and emission efficiencies are most usefully quantified in terms of the molar extinction coefficient (EC) for absorption and the quantum yield (QY) for fluorescence. Both are constants under specific environmental conditions. The value of EC is specified at a single wavelength (usually the absorption ...
The research of biomolecular processes on the level of single molecules and in volume ranges equivalent to the size of a single bacterium is of immense importance, both in basic research and in industrial high-throughput screening. The combination of modern confocal optics, new fluorescent dyes, sensitive photomultipliers and improved data processing has revolutionised the technique of fluorescence correlation spectroscopy (FCS). Over the past few years this has led to its widespread application, and alongside the technological advances in hardware development, Greiner Bio-One worked hand-in-hand with customers and instrument suppliers to develop the glass bottom microplates. These better satisfy the requirements of fluorescence correlation spectroscopy with regard to optical clarity and deformation when compared to standard polystyrene plates ...
This review exposes the current poor understanding of the internal segmental chain dynamics of dendrimers in solution probed by monitoring the process of excimer formation between pyrene labels covalently attached to the chain ends of dendrimers. The review begins by covering the bases of fluorescence and the kinetics of pyrene excimer formation before describing a procedure based on the Model Free (MF) analysis that is used to analyze quantitatively the fluorescence decays acquired for dendrimers, the ends of which have been fully and covalently labeled with pyrene. Comparison of the various trends obtained by different research groups describing the efficiency of pyrene excimer formation with the generation number of dendrimers illustrates the lack of consensus between the few studies devoted to the topic. One possible reason for this disagreement might reside in the presence of minute amounts of unattached pyrene labels which act as potent fluorescent impurities and affect the analysis of the
TY - JOUR. T1 - Fluorescence correlation spectroscopy in surface plasmon coupled emission microscope. AU - Borejdo, J.. AU - Calander, N.. AU - Gryczynski, Z.. AU - Gryczynski, I.. PY - 2006. Y1 - 2006. N2 - Study of dynamics of single molecules by Fluorescence Correlation Spectroscopy (PCS) requires that the rate of photon detection per molecule be high, that the background be low, and that there be a large change in fluorescent signal associated with change in a position of a molecule. PCS applied to microscopic Surface Plasmon Coupled Emission (SPCE) suggests a powerful method to meet those requirements. In this method, the observational volume is made shallow by placing a sample on a thin metal film and illuminating it with the laser beam at Surface Plasmon Resonance (SPR) angle through high numerical aperture objective. The illuminating light excites surface plasmons in the metal film that produce an evanescent wave on the aqueous side of the interface. The thickness of the detection volume ...
Novel core-shell nanoparticles were prepared as encapsulating agents for fluorescent organic dyes. These particles protect the dyes from polar solvents, allowing their use in aqueous environments, such as biological systems. The nanoparticles were synthesized using a ternary surfactant system containing the dyes as templates, using octadecyltrimethoxysilane (OTMS) as a reactive surfactant. Silanol groups were formed by the hydrolysis and condensation of the OTMS methoxy groups, to act as anchoring points for the growth of a siloxane shell. The dyes used in this study are polarity and rigidity sensitive; as a consequence, the dyes emission was studied by steady state fluorescence (SSF) and fluorescent lifetime measurements. The data obtained showed the effects of the isolation of the dyes from the solvent. An increase in the viscosity, together with a decrease in the polarity of the encapsulation volume, produced changes in the emission maxima of the dyes, demonstrating that the dyes were effectively
© The Author(s). Published by IOP Publishing Ltd. Probing the diffusion of molecules has become a routine measurement across the life sciences, chemistry and physics. It provides valuable insights into reaction dynamics, oligomerisation, molecular (re-)organisation or cellular heterogeneities. Fluorescence correlation spectroscopy (FCS) is one of the widely applied techniques to determine diffusion dynamics in two and three dimensions. This technique relies on the temporal autocorrelation of intensity fluctuations but recording these fluctuations has thus far been limited by the detection electronics, which could not efficiently and accurately time-tag photons at high count rates. This has until now restricted the range of measurable dye concentrations, as well as the data quality of the FCS recordings, especially in combination with super-resolution stimulated emission depletion (STED) nanoscopy. Here, we investigate the applicability and reliability of (STED-)FCS at high photon count rates (average
Protein encapsulated gold nanoclusters have received much attention due to the possibility of using them as a non-toxic fluorescent probe or marker for biomedical applications, however one major disadvantage currently is their low brightness and quantum yield in comparison to currently used fluorescent markers. A method of increasing the fluorescence emission of Human Serum Albumin (HSA) encapsulated gold nanoclusters (AuNCs) via a Polyallylamide hydrochloride (PAH) coating is described. PAH molecules with a molecular weight of ~17,500 Da were found to enhance the fluorescence emission of HSA-AuNCs by 3-fold when the protein/polymer concentration ratio is 2:1 in solution. Interestingly, the fluorescence lifetime of the AuNCs was found to decrease while the native tryptophan (TRP) fluorescence lifetime also decreased during the fluorescence emission intensity enhancement caused by the PAH binding. Coinciding with the decrease in fluorescence lifetime, the zeta potential of the system was observed ...
During the past five decades, the use of X-ray analytical methods has increased in the areas of materials characterization and phase identification. The wide range of applicability of the X-ray fluorescence method has made it a technique employed in thousands of laboratories all over the world. Over the years, many techniques and procedures have been developed that greatly enhance the versatility of the method. The purpose of the X-ray clinic is to combine theoretical and practical application of X-ray fluorescence spectrometry ...
Laser-induced fluorescence emission contains information about both spectra and time, so the different shapes, intensities and fluorescent lifetimes of fluorescence emission spectra can be used to measure the categories and contents of fluorescent substances with high sensitivity and good selectivity. To measure the oil micro-contamination in water, we utilized femtosecond ultraviolet laser pulse (fs Laser: MaiTai, Spectra Physics, US) as driving source and gated enhanced type ICCD (Time-resolved Fluorescence Spectroscopy, Lavision, German) as detector. We carried through laser-induced fluorescence measurement on DaGang crude oils and machine oils, accomplished data processing, and analyzed the differences of shapes of fluorescence spectra and lifetimes between crude oil and refined oil ...
Using a confocal epi-illuminated microscope with a polarizing beam splitter and dual-channel detection of single-molecule fluorescence induced by pulsed laser excitation, a new application of the three-dimensional, real-time spectroscopic technique BIFL (burst integrated fluorescence lifetime) is introduced. BIFL allows simultaneous registration of fluorescence intensity, lifetime, and anisotropy. It is shown to be well-suited to identify the freely diffusing fluorescent molecule Rhodamine 123 and the Enhanced Yellow Fluorescent Protein via their characteristic fluorescence anisotropy using a time-resolved analysis. Furthermore, data analysis is discussed and rotational correlation times of single molecules are determined. Applications for multidimensional single-molecule identification are outlined.
The fluorescence properties of tryptophan residues are sensitive to the microenvironment of fluorophores in proteins. Therefore, fluorescence characteristics are widely used to study structural transitions in proteins. However, the decoding of the structural information from spectroscopic data is challenging. Here we present a review of approaches developed for the decomposition of multi-component protein tryptophan fluorescence spectra and correlation of these spectral parameters with protein structural properties.
1. The fluorescent ATP analogue 1,N6-etheno-ATP is a good substrate and an efficient allosteric inhibitor of rabbit skeletal-muscle phosphofructokinase. 2. Fluorescence energy transfer occurs between bound 1,N6-etheno-ATP and phosphofructokinase. 1,N6-Etheno-ATP fluorescence is enhanced, intrinsic protein fluorescence is quenched, and the excitation spectrum of 1,N6-etheno-ATP fluorescence is characteristic of protein absorption. 3. The binding reaction of 1,N6-etheno-ATP observed by stopped-flow fluorimetry is biphasic. The fast phase results from binding to the catalytic site alone. The slow phase results from the allosteric transition of the R conformation into the T conformation induced by the binding of 1,N6-etheno-ATP to the regulatory site. 4. The fluorescence signal that allows the transition of the R conformation into the T conformation to be observed does not arise from 1,N6-etheno-ATP bound to the regulatory site. It arises instead from 1,N6-etheno-ATP bound to the catalytic site as a ...
The ethanol-water mixtures can emit fluorescence when excited by the ultraviolet (UV) light, which is different from pure ethanol and water. There are three emission bands of the mixtures and the center bands are located at 290, 305, and 330 nm, respectively. The fluorescence lifetimes of different emission bands are tested respectively: the average lifetime of 330-nm fluorescence band is about 26.5 ns, for the 305-nm emission band 2.5 ns, and for the 290-nm band 11 ns. By the spectral characteristic and the time-resolved spectroscopy one can conclude that there are several components in the solution of ethanol-water mixture. © 2005 Chinese Optics Letters. PDF Article ...
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TY - JOUR. T1 - Nanosecond fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy to localize the protein interactions in a single living cell. AU - Elangovan, M.. AU - Day, R. N.. AU - Periasamy, A.. PY - 2002/2/18. Y1 - 2002/2/18. N2 - Visualizing and quantifying protein-protein interactions is a recent trend in biomedical imaging. The current advances in fluorescence microscopy, coupled with the development of new fluorescent probes such as green fluorescent proteins, allow fluorescence resonance energy transfer (FRET) to be used to study protein interactions in living specimens. Intensity-based FRET microscopy is limited by spectral bleed-through and fluorophore concentration. Fluorescence lifetime imaging (FLIM) microscopy and lifetime measurements are independent of change in fluorophore concentration or excitation intensity, and the combination of FRET and FLIM provides high spatial (nanometre) and temporal (nanoseconds) resolution. Because only the donor ...
In this work, fluorescence correlation spectroscopy (FCS) was used to investigate the effects of potassium iodide (KI) on the electronic-state population kinetics of a range of organic dyes in the visible wavelength range. Apart from a heavy atom effect promoting intersystem crossing to the triplet states in all dyes, KI was also found to enhance the triplet-state decay rate by a charge-coupled deactivation. This deactivation was only found for dyes with excitation maximum in the blue range, not for those with excitation maxima at wavelengths in the green range or longer. Consequently, under excitation conditions sufficient for triplet state formation, KI can promote the triplet state buildup of one dye and reduce it for another, red-shifted dye. This anticorrelated, spectrally separable response of two different dyes to the presence of one and the same agent may provide a useful readout for biomolecular interaction and microenvironmental monitoring studies. In contrast to the typical notion of ...
Sterile α motif (SAM) domains are found in many different proteins and shown to play important roles in various biological processes. The N-terminal domain of deleted in liver cancer 1 (DLC1) protein is a SAM domain which exists in a monomeric form in aqueous solution and facilitates the distribution of EF1A1 to the membrane periphery and ruffles upon growth factor stimulation. Here, we report the structure of an N-terminal truncated DLC1 SAM domain (DLC1-SAM) and its urea-induced equilibrium unfolding investigated with various biophysical methods such as CD, fluorescence emission spectroscopy, and NMR. CD and tryptophan intrinsic fluorescence emission data imply that the unfolding of DLC1-SAM follows a simple two-state mechanism, yet the NMR data suggest the presence of at least one intermediate state. The intermediate cannot be detected by NMR, but it does not exist in large aggregates as shown by analytical ultracentrifugation experiments. Analysis of the free energy values for different ...
TY - JOUR. T1 - Stark effects in gas-phase electronic spectra. Dipole moment of aniline in its excited S1 state. AU - Korter, T. M.. AU - Borst, D. R.. AU - Butler, C. J.. AU - Pratt, D. W.. PY - 2001/1/10. Y1 - 2001/1/10. N2 - Measurements of the Stark effect on the rotationally resolved S1←S0 fluorescence excitation spectrum of aniline are reported, providing quantitative information about the degree of charge transfer in the electronic transition. We find that μa(S1 = 2.801 ± 0.007 D, a value that is ∼150% larger than the ground state, μa(S0) = 1.129 ± 0.005 D. The enhanced value of the dipole moment in the S1 state is attributed to more efficient electron donation by the quasi-planar amino group to the aromatic ring.. AB - Measurements of the Stark effect on the rotationally resolved S1←S0 fluorescence excitation spectrum of aniline are reported, providing quantitative information about the degree of charge transfer in the electronic transition. We find that μa(S1 = 2.801 ± 0.007 ...
ortho-Aminobenzoic acid (Abz) has been used as a convenient fluorescent donor group in internally quenched fluorescent peptides, which are employed as substrates for several proteolytic enzymes. As Abz is usually bound to the N-amino terminal of these peptides, it is of interest to investigate the Abz group fluorescent properties bound to different amino acids. We report in this article the optical absorption and fluorescent properties, in aqueous media, of Abz bound to the alpha-amino group of Ala, Gly, Leu, ne, Val, Pro, Phe, Arg, Glu, Met, Asn, Tyr, and Trp, with monomethyl-amidated alpha-carboxyl group, in order to explore the origin of the drastic reduction of Abz attached to N-alpha amino group of prolyl-peptides, we also examined the fluorescence properties of Abz-NHCH3, Abz-N(CH3)(2), and Abz-pyrrolidine. Molecular dynamics simulation and NMR data indicated a lack of periplanarity of the Abz-dimethylamide, which could be the origin of low fluorescence quantum yield of ...
Fluorescence spectroscopy is spectroscopy which is based on the analysis of fluorescence light. It can be used in fields like chemistry, medicine and pharmacy, biomedical research and environmental monitoring.
Tryptophan fluorescence quenching is a type of fluorescence spectroscopy used for binding assays. The assay relies on the ability to quench the intrinsic fluorescence of tryptophan residues within a protein that results from changes in the local environment polarity experienced by the tryptophan(s) upon the addition of a binding partner or ligand. The quenching can arise from local changes near the interaction site or from binding-induced conformational changes. In cases where the titrant absorbs at or near the excitation or emission wavelengths of tryptophan, significant quenching can occur even without an interaction. This is known as the inner filter effect. This protocol describes how to use tryptophan fluorescence quenching to investigate the binding affinity of a protein for its partner/ligand and how to check and correct for the inner filter effect. As an example, we measured the binding affinity of the haem-binding protein, HusA, from Porphyromonas gingivalis for haem, and showed how we
Nowadays, emission regulations and the requirement to reduce greenhouse gas emissions have escalated engine development efforts. In the present work, the effect of compression ratio on the performance, combustion and emission characteristics of a spark-ignition engine is evaluated at different opera
合成系列含缩醛的双链正离子类脂分子,并用荧光光谱研究其与牛血清蛋白(BSA)的相互作用.通过荧光的变化,解释蛋白质构象的变化.在低类脂浓度时,少量类脂分子束缚在牛血清蛋白周围,荧光有很大幅度的淬灭,蛋白质本身肽链被解开,与此同时最大发射波长从(344±1) nm 蓝移到(331±1) nm.由于疏水相互作用,更多类脂分子不断地聚集在蛋白质周围,牛血清蛋白中的两个色氨酸残基被完全地包裹在类脂分子形成的双分子膜中,荧光强度不断增加直到恒定不变.;Interactions of a series of dialkyl cationic lipids linking with bovine serum albumin (BSA) through acetal (linker) have been studied by the fluorescence spectroscopy. At low concentrations of cationic lipids, the fluorescence intensity of BSA decreased with binding of cationic lipid, and the maximum of emission wavelength shifted from (344±1)nm to (331±1)nm. It indicates that the BSA goes to uncoiled flexible
PAN, Xiangliang et al. A comparison of five extraction methods for extracellular polymeric substances (EPS) from biofilm by using three-dimensional excitation-emission matrix (3DEEM) fluorescence spectroscopy. Water SA [online]. 2010, vol.36, n.1, pp.111-116. ISSN 1816-7950.. Two physical methods (centrifugation and ultrasonication) and 3 chemical methods (extraction with EDTA, extraction with formaldehyde, and extraction with formaldehyde plus NaOH) for extraction of EPS from alga-bacteria biofilm were assessed. Pretreatment with ultrasound at low intensity doubled the EPS yield without significant modification of the composition of EPS. Extraction with EDTA or extraction with formaldehyde plus NaOH increased yield by about 1 order of magnitude compared with other methods. However, the protein and polysaccharide content in EPS prepared with EDTA or formaldehyde plus NaOH were low. Two fluorescence peaks belonging to protein-like peaks and 2 fluorescence peaks belonging to humic acid-like ...
article{744458, author = {Remaut, Katrien and Sanders, Niek and De Geest, Bruno and Braeckmans, Kevin and Demeester, Jo and De Smedt, Stefaan}, issn = {0927-796X}, journal = {MATERIALS SCIENCE \& ENGINEERING R-REPORTS}, keyword = {SINGLE-PARTICLE TRACKING,FLUORESCENCE CORRELATION SPECTROSCOPY,CROSS-CORRELATION SPECTROSCOPY,advanced light microscopy,nuclear uptake,endocytosis,extracellular matrix,non-viral carriers,gene therapy,GLYCOL-POLYETHYLENIMINE/DNA COMPLEXES,CYSTIC-FIBROSIS SPUTUM,BLOCK-COPOLYMER MICELLES,RESONANCE ENERGY-TRANSFER,CAVEOLAE-MEDIATED ENDOCYTOSIS,INTRAVENOUS GENE DELIVERY,IMAGE CORRELATION SPECTROSCOPY}, language = {eng}, pages = {117--161}, title = {Nucleic acid delivery: Where material sciences and bio-sciences meet}, url = {http://dx.doi.org/10.1016/j.mser.2007.06.001}, volume = {58}, year = {2007 ...
A membrane-based assay device for detecting the presence or quantity of an analyte residing in a test sample is provided. The device utilizes time-resolved fluorescence to detect the signals generated by excited fluorescent labels. Because the labels can have relatively long emission lifetime, short-lived background interference can be practically eliminated through delayed fluorescence detection. In addition, the resulting fluorescent reader can have a simple and inexpensive design. For instance, in one embodiment, the reader can utilize a silicon photodiode and a pulsed light-emitting diode (LED) to accurately excite labels and detect fluorescence on a membrane-based assay device without requiring the use of expensive components, such as monochromators or narrow emission band width optical filters.
Current far-field fluorescence nanoscopes provide subdiffraction resolution by exploiting a mechanism of fluorescence inhibition. This mechanism is implemented such that features closer than the diffraction limit emit separately when simultaneously exposed to excitation light. A basic mechanism for such transient fluorescence inhibition is the depletion of the fluorophore ground state by transferring it (via a triplet) in a dark state, a mechanism which is workable in most standard dyes. Here we show that microscopy based on ground state depletion followed by individual molecule return (GSDIM) can effectively provide multicolor diffraction-unlimited resolution imaging of immunolabeled fixed and SNAP-tag labeled living cells. Implemented with standard labeling techniques, GSDIM is demonstrated to separate up to four different conventional fluorophores using just two detection channels and a single laser line. The method can be expanded to even more colors by choosing optimized dichroic mirrors and
Protein-RNA and protein-protein interactions involved in the assembly of the signal recognition particle (SRP) were examined using fluorescence spectroscopy. Fluorescein was covalently attached to the 3′-terminal ribose of SRP RNA following periodate oxidation, and the resulting SRP RNA-Fl was reconstituted into a fluorescent SRP species that was functional in promoting translocation of secretory proteins across the membrane of the endoplasmic reticulum. Each of the two protein heterodimers purified from SRP elicited a substantial change in fluorescein emission upon association with the modified RNA. The binding of SRP9/14 to singly-labeled SRP RNA-Fl increased fluorescein emission intensity by 41% at pH 7.5 and decreased its anisotropy from 0.18 to 0.16. The binding of SRP68/72 increased the fluorescein anisotropy from 0.18 to 0.23 but did not alter the emission intensity of SRP RNA-Fl. These fluorescence changes did not result from a direct interaction between the dye and protein because the ...
A new branch of fluorescence has emerged with the use of metallic nanostructures to enhance optical signals: Plasmon enhanced fluorescence (PEF). In the literature it has grown with two different names: surface enhanced fluorescence (SEF) and also metal enhanced fluorescence (MEF). In this thesis, we have explored some of the peculiar properties of plasmon enhanced fluorescence. In particular, we try to relate intrinsic molecular properties of fluorescence such as cross section and quantum yield to the enhanced signal. The source and basic properties of localized surface plasmon resonances is also discussed. The attention is then centre in the plasmon signature on the fluorescence spectrum or spectral profile modification. The matching of plasmon scattering and fluorescence emission assists in constructing fluorophore-nanoparticle systems for PEF applications. Specific experiments are discussed design to test the impact of the fluorophore quantum yield in observed enhancement. Finally, a practical
We use all-atom MD simulations, combined with patch-clamp electrophysiology and time-resolved fluorescence spectroscopy, to investigate functional dynamics of neurotransmitter transporters and Cl- channels. We developed kinetic state models to explain the functional coupling of secondary active glutamate transport and channel-like anion conduction in EAAT glutamate transporters (1-3), and advanced noise analysis techniques to measure unitary properties of transporter-associated channels (4). Using stopped-flow fluorescence recordings, we identified an induced-fit substrate binding mechanism in EAATs (4). The prokaryotic EAAT homolog GltPh is the founding member of the group of transporters with an elevator transport mechanism, and we used essential dynamics sampling to simulate the inward-outward transition path (5). We identified the Cl- permeation pathway and Cl- conduction mechanism in EAATs (5,6) using Computational Electrophysiology, a simulation technique for all-atom MD simulations of ...
7-AAD Staining Solution is a ready-to-use reagent suitable for the evaluation of cell viability in mono- or multiparametric analyses of human peripheral blood using flow cytometry. 7-AAD (7-amino-actinomycin D) is a fluorescent dye that intercalates into double-stranded DNA (GC rich regions). It is excluded from viable cells, but can penetrate cell membranes of dead or dying cells. Therefore, it can be used instead of propidium iodide (PI) for the evaluation of cell death and apoptosis. The fluorescence emission maximum for 7-AAD is at 647 nm. When excited at 488 nm, 7-AAD is detected in the red fluorescence channel commonly used for R-phycoerythrin (PE)-Cy® 5 tandem dye detection, with minimal spectral overlap into the yellow fluorescence channel commonly used for PE detection. - Schweiz
7-AAD Staining Solution is a ready-to-use reagent suitable for the evaluation of cell viability in mono- or multiparametric analyses of human peripheral blood using flow cytometry.7-AAD (7-amino-actinomycin D) is a fluorescent dye that intercalates into double-stranded DNA (GC rich regions). It is excluded from viable cells, but can penetrate cell membranes of dead or dying cells. Therefore, it can be used instead of propidium iodide (PI) for the evaluation of cell death and apoptosis.The fluorescence emission maximum for 7-AAD is at 647 nm. When excited at 488 nm, 7-AAD is detected in the red fluorescence channel commonly used for R-phycoerythrin (PE)-Cy®5 tandem dye detection, with minimal spectral overlap into the yellow fluorescence channel commonly used for PE detection. - Nederland
Nine novel 2-aryl-6-(aryleneethynylene)-1H-indoles were prepared by one pot Sonogashira cross-coupling in DMSO and fluoride promoted cyclization followed by N-alkylation. The photophysical properties of these compounds are described. Absorption and excitation spectra of these compounds were independent of the solvent polarity, while their emission spectra showed a pronounced dependence. Fluorescence quantum yields in solution were very high and decreased with solvent polarity; possible processes that account for excessive values of ? are discussed. Cyclic voltammetry studies indicate irreversible redox processes and DFT calculations suggest they occur in the indole segment. ...
Thawing permafrost due to increasingly warm temperatures in northern subarctic regions is releasing mercury. The consequent formation of thaw ponds in the peatland palsa valley of the Sasapimakwananisikw (SAS) river in Whapmagoostui-Kuujjuarapik, Québec may provide a pool for MMHg formation and a potential risk to aquatic and human life, if these ponds facilitate MMHg export through hydrological connections to nearby waterways. Hg methylation and MMHg demethylation activities were examined in thaw pond sediments using a Hg tracer isotope incubation experiment. Analysis by coupling gas chromatography cold-vapor atomic fluorescence spectrophotometry (GC-CVAFS) with inductively coupled mass spectrometry (ICP-MS) techniques showed that MMHg was produced at a higher rate and within the first 2 h of incubation for both summer and winter seasons. For thaw ponds SAS1A, SAS1B and SAS2A, MMHg was formed at 0.0048 % h-1, 0.0012 % h-1, and 0.0008 % h-1, respectively during winter and at 0.0001 % h-1, ...
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Fluorescence techniques are being used and applied increasingly in academics and industry. The Principles of Fluorescence Techniques course will outline the basic concepts of fluorescence techniques and the successful utilization of the currently available commercial instrumentation.. The course is designed for students who utilize fluorescence techniques and instrumentation and for researchers and industrial scientists who wish to deepen their knowledge of fluorescence applications. Key scientists in the field will deliver theoretical lectures. The lectures will be complemented by the direct utilization of steady-state and lifetime fluorescence instrumentation and confocal microscopy for FLIM and FFS applications.. Participants are recommended to have at least a bachelors degree in the life sciences, physical sciences or engineering before attending. Interactions between participants and lecturers will be fostered. Students will have ample opportunity to personally explain their research ...
Fluorescence techniques are being used and applied increasingly in academics and industry. The Principles of Fluorescence Techniques course will outline the basic concepts of fluorescence techniques and the successful utilization of the currently available commercial instrumentation.. The course is designed for students who utilize fluorescence techniques and instrumentation and for researchers and industrial scientists who wish to deepen their knowledge of fluorescence applications. Key scientists in the field will deliver theoretical lectures. The lectures will be complemented by the direct utilization of steady-state and lifetime fluorescence instrumentation and confocal microscopy for FLIM and FFS applications.. Participants are recommended to have at least a bachelors degree in the life sciences, physical sciences or engineering before attending. Interactions between participants and lecturers will be fostered. Students will have ample opportunity to personally explain their research ...
Vulnerable plaques, which are responsible for most acute ischemic events, are presently invisible to x-ray angiography. Their primary morphological features include a thin or ulcerated fibrous cap, a large necrotic core, superficial foam cells, and intraplaque hemorrhage. We present evidence that multimodal spectroscopy (MMS), a novel method that combines diffuse reflectance spectroscopy (DRS), intrinsic fluorescence spectroscopy (IFS), and Raman spectroscopy (RS), can detect these markers of plaque vulnerability. To test this concept, we perform an MMS feasibility study on 17 human carotid artery specimens. Following the acquisition of spectra, each specimen is histologically evaluated. Two parameters from DRS, hemoglobin concentration and a scattering parameter, are used to detect intraplaque hemorrhage and foam cells; an IFS parameter that relates to the amount of collagen in the topmost layers of the tissue is used to detect the presence of a thin fibrous cap; and an RS parameter related to ...
While this paper had no mention of wetting, surfaces, or capillary forces, the technique of fluorescence correlation spectroscopy is probably worth mentioning, as it is employed specifically in soft matter experiments. FCS is typically used to measure diffusion constants of fluorescent molecules in solution. The number of fluorescent molecules in the focal spot will follow a Poisson distribution, and the relative change in fluorescence over time with therefore vary both with the number of fluorescent particles (which determines the amplitude of the autocorrelation function) and the rate of diffusion of these particles (which determines the decay rate in the autocorrelation function). So if particles diffuse more slowly, then the fluorescence changes more slowly, and the correlation in fluorescence will apply over longer periods of time. The authors apply this principle of FCS to a two-state system: the MS2-GFP protein, where MS2 is the domain that will bind to a specific RNA target, and GFP is ...
Rapid activation of guanine nucleotide-binding protein (G protein)-mediated signal transduction mechanisms occurs in many tissues. The human neutrophil provides a useful model for studying the mechanisms of these fast processes. Fluorescent chemotactic tetrapeptide and pentapeptide exhibit 30-50% quenching of fluorescence upon binding to the neutrophil formyl peptide receptor, and their binding affinity is strongly regulated by the G protein Gi. We used rapid kinetic spectrofluorometric methods to study the assembly and disassembly of the ternary complex of ligand, receptor, and G protein in digitonin-permeabilized human neutrophils. Binding was studied up to 20 nM ligand, where the half-time for association was 1.2 sec. The rate constant of association was near that for diffusion-limited reactions of ligands and proteins, 2 x 10(7) M-1 sec-1. The rate of uncoupling of formyl peptide receptor from G protein in the presence of high concentrations of guanine nucleotide was , or = 5 sec-1 (i.e., ...
We report the use of the macrocyclic host cucurbit[7]uril (CB7) as a supramolecular additive in nanosecond time-resolved fluorescence (Nano-TRF) assays for proteases to enhance the discrimination of substrates and products and, thereby, the sensitivity. A peptide substrate was labeled with 2,3-diazabicyclo[2.2.2]oct-2-ene (DBO) as a long-lived (>300 ns) fluorescent probe and 3-nitrotyrosine was established as a non-fluorescent fluorescence resonance energy transfer (FRET) acceptor that acts as a
Correlation Spectroscopy is an increasingly popular method of analyzing spectral data, with the goal of improved understanding of sample chemistry, physics and spectroscopy. The original form of this method dealt exclusively with cases where a single sample is analyzed spectroscopically while being perturbed mechanically in a sinusoidal manner. However, more recent extensions towards spectroscopic data that is collected in the presence of any sample perturbation led to the concept of Generalized 2D Correlation Spectroscopy, which is the subject of this course.. The course will begin with an explanation of the principles of classical Correlation Spectroscopy. This will include a discussion of the two complementary methods to display the temporal correlation behavior in spectral data sets: the synchronous and asynchronous maps.. Several chemometric methods can be particularly useful when combined with Correlation Spectroscopy, including Self-Modeling Curve Resolution (a series of methods ...
Rothwell, P. J.; Berger, S.; Kensch, O.; Felekyan, S.; Antonik, M.; Woehrl, B. M.; Restle, T.; Goody, R. S.; Seidel, C.: Multiparameter single-molecule fluorescence spectroscopy reveals heterogeneity of HIV-1 reverse transcriptase: primer/template complexes. Proceedings of the National Academy of Sciences of the United States of America 100 (4), S. 1655 - 1660 (2003 ...
The nuclei of embryonic Swiss mouse fibroblasts in culture were targeted with the nucleic acid probe DAPI, which has an excitation maximum at 358 nanometers and an emission maximum at 461 nanometers when bound to DNA in cell cultures and tissue sections.
Because one of the main bottlenecks in determining the structure of protein molecules is producing good isolated single crystals, improved crystallization techniques would be useful in a wide range of genomics and pharmaceutical research.. Research reported in The Journal of Chemical Physics uses fluorescence correlation spectroscopy (FCS) to investigate the processes at the surface of a growing crystal. By focusing a laser on the crystal surface and measuring the resulting fluorescence, FCS can resolve dimensions as small as a single wavelength of the light.. Another advantage of fluorescence is that it provides a high signal-to-noise ratio, says author Shinpei Tanaka of Hiroshima University in Japan. We are able to measure very dilute solutions at the crystal interface.. The researchers found that when single tetragonal crystals of egg-white lysozyme formed, there was no concentration gradient between the solution and the crystal surface. However, in formation of clumps of needle-like ...
This thesis proposes mechanisms by which a spiked mobile phase fluorescence detector (SMP-FD) for HPLC is able to detect not only fluorescent compounds, but non-fluorescent chromophoric and non-fluorescent, non-chromophoric compounds as well. This reconfigured fluorescent detector is achieved simply.... Full description. ...
This thesis proposes mechanisms by which a spiked mobile phase fluorescence detector (SMP-FD) for HPLC is able to detect not only fluorescent compounds, but non-fluorescent chromophoric and non-fluorescent, non-chromophoric compounds as well. This reconfigured fluorescent detector is achieved simply.... Full description. ...
Oligomerization of membrane proteins has received intense research interest because of their importance in cellular signaling and the large pharmacological and clinical potential this offers. Fluorescence imaging methods are emerging as a valid tool to quantify membrane protein oligomerization at high spatial and temporal resolution. Here, we provide a detailed protocol for an image-based method to determine the number and oligomerization state of fluorescently labeled prototypical G-protein-coupled receptors (GPCRs) on the basis of small out-of-equilibrium fluctuations in fluorescence (i.e., molecular brightness) in single cells. The protocol provides a step-by-step procedure that includes instructions for (i) a flexible labeling strategy for the protein of interest (using fluorescent proteins, small self-labeling tags or bio-orthogonal labeling) and the appropriate controls, (ii) performing temporal and spatial brightness image acquisition on a confocal microscope and (iii) analyzing and ...
Fluorescence reading or fluorescence measurement is the measurement of the light rays coming out of the fluorescent particle by energizing through the light at much greater energy and comparatively much lesser wavelength. In this process, a sample is energized through the light generated using a source of light and then screened at a certain wavelength, either using a screener or monochromator.. The samples post being energized mostly radiate the lights at minimal energy and greater wavelength in comparison with the energized light and fluorescence within no time after energizing. The light post emission is screened, captured, and measured as well using detectors. Fluorescence reader comes handy in such occasions.. Energy emission mechanism. Great to see is the way the fluorescence has developed in terms of its standard in the past twenty years. This has made the intensity calculation of fluorescence a highly acclaimed method of fluorescence reader. Making things even more encouraging, there are ...
TY - JOUR. T1 - Synthesis and characterization of membrane stable bis(arylimino)isoindole dyes and their potential application in nano-biotechnology. AU - Kim, Benjamin. AU - Yalaz, Ceren. AU - Pan, Dipanjan. PY - 2012/8/8. Y1 - 2012/8/8. N2 - A synthetic methodology of preparing novel membrane stable, responsive dyes is revealed in this manuscript. 1,3-Bis(arylimino)isoindole dyes were synthesized and their properties to undergo intramolecular hydrogen bonding was studied with fluorescence spectroscopy in varying solvent polarities. Based on the functional moieties, compound that is capable of hydrogen donor and acceptor interactions produces predominant photoexcitation in comparison to the responsive dyes that lack these functionalities. These dyes, by the virtue of the presence of long chain acyl groups could be incorporated stably within the phospholipids membrane of core-shell nanoparticles. Nanoparticle was cracked to release the dye from a hydrophobic to a hydrophilic environment. A ...
... fluorescence, phosphorescence, and luminescence; Raman spectroscopy and FT-Raman; X-ray (XRF, XRD, and microanalysis); mass ... spectrometry; magnetic resonance (NMR, EPR, MRI); surface analysis (ESCA, SIMS, Auger); and laser-based spectroscopic ...
"FIBER OPTICAL ASSEMBLY FOR FLUORESCENCE SPECTROMETRY". United States Patent Application 20110042585. Retrieved 2011-08-19. " ... Thus, once deployed for use in a facility, the fluorescence information can be fiberoptically transmitted to a remote location ... The conventional method of performing laser-induced fluorescence, as well as other types of spectroscopic measurements, such as ... increasing the amount of fluorescence signal by around a factor of 10 over conventional apparatus. SOFIA is an apparatus and ...
ISBN 0-89236-469-6. Lee, Lynn (2013-12-09). "Boot Camp for Conservators Explores X-Ray Fluorescence Spectrometry". The Getty ... requires obtaining a sample from an object or artwork and exposing it to X-Ray radiation X-Ray Fluorescence Spectroscopy (XRF) ...
This includes chromatographic techniques coupled to mass spectrometry and fluorescence detectors. All of the chromatographic ... Chromatographic methods with fluorescence detection Liquid chromatography with fluorescence detection (LC-FLD) provides a ... YTX analysis limits of detection of 30 mg/g of shellfish tissue for chromatographic methods coupled to mass spectrometry have ... The techniques used for YTX analysis include: CE with ultraviolet (UV) detection and CE coupled to mass spectrometry (MS). CEUV ...
Deng, C.; Xiong, X.; Krutchinsky, A. N. (2009). "Unifying Fluorescence Microscopy and Mass Spectrometry for Studying Protein ...
Biophysics: calorimetry, CD, fluorescence, light scattering, SPR, ultracentrifugation. Flow Cytometry Fluorescence Activating ... Mass Spectrometry: qualitative, quantitative, and structural analysis of proteins, carbohydrates, oligonucleotides, and lipids ... 2019 Richard M. Caprioli for the discovery of temporal and spatial processing in biological systems using mass spectrometry. ... Mass Spectrometry. 2011 Sir Alec John Jeffreys: Developed techniques for DNA fingerprinting and DNA profiling 2010 Pat Brown: ...
199, p 1-60, (2017). A flexible setup for angle-resolved X-ray fluorescence spectrometry with laboratory sources. M. Spanier, C ... Wherry described an X-ray micro-fluorescence analyzer which combines the nondestructive analytical method of X-ray fluorescence ... X-Ray Spectrometry, Vol 38, No 3, p 216-221, (2009). Improvements of the low-energy performance of a micro-focus x-ray source ... X‐Ray Spectrometry: An International Journal 38.4 (2009): 308-311. A microfocus X-ray source for improved EDS and XRF analysis ...
"A LabVIEW-controlled portable x-ray fluorescence spectrometer for the analysis of art objects". X-Ray Spectrometry. 35 (5): 280 ...
Typical methods for PMI include X-ray fluorescence (XRF) and optical emission spectrometry (OES). PMI is a portable method of ... X-ray fluorescence (XRF) PMI can not detect small elements such as carbon. This means that when undertaking analysis of ... This however can be analysed with optical emission spectrometry (OES) "Positive Material Identification (PMI)". www.intertek. ...
"Investigating the origin and authenticity of Victoria Cross medals using X-ray fluorescence spectrometry". Scientific Reports. ...
... ultra sensitive detection of atoms and molecules using laser Fluorescence and resonance ionization mass spectrometry; the ...
Law for Quantitative X-ray Fluorescence by the Fundamental Parameters Method". X-Ray Spectrometry. 6 (4): 201. Bibcode:1977XRS ... Rene Van Grieken; Andrzej Markowicz (2001). Handbook of X-Ray Spectrometry. CRC Press. p. 3. ISBN 978-0-203-90870-9. Knipp, J.K ...
Law for Quantitative X-ray Fluorescence by the Fundamental Parameters Method". X-Ray Spectrometry. 6 (4): 201. Bibcode:1977XRS ...
The other two systems are the X-ray fluorescence Spectrometry (XRF) and X-ray fluorescence Diffractometry (XRD). The XRF is a ... The collected samples were analyzed for REE and thorium using X-ray fluorescence (XRF) and uranium determination using ... Applied Physics Research Section The PNRI houses the Mössbauer Effect Spectrometry (MES) system, which studies nuclear ... In the Radiometric / Gamma ray Spectrometry, gamma ray spectrometers are used for geological mapping, radiogenic mineral ...
In forensic toxicology, techniques involving gas chromatography coupled to mass spectrometry (GC-MS) are the most widely used ... High-performance liquid chromatography (HPLC) is used with ultraviolet, fluorescence, electrochemical, and electrospray mass ... These techniques include ion mobility spectrometry, capillary zone electrophoresis, ultraviolet spectroscopy, and infrared ... psilocybin and psilocin in Psilocybe subcubensis Guzmán by ion mobility spectrometry and gas chromatography-mass spectrometry ...
2005: Gold - JEOL Ltd - DART (direct analysis real-time) ionisation technology for mass spectrometry; Silver - ESA Biosciences ... Portable S2 PICOFOX total reflection X-ray fluorescence spectrometer. 2007: Gold - Waters Corp - Synapt high definition mass ... Full Spectrum Molecular Imaging integrating MALDI, DESI, and ion mobility mass spectrometry techniques and informatics ... Nexera UC fully automated supercritical fluid extraction - supercritical fluid chromatography - mass spectrometry system; ...
... optical emission and x-ray fluorescence (XRF) spectrometry. SPECTRO is a major provider or analytical instrumentation with an ... Instruments is a manufacturer of elemental analyzers using optical emission spectroscopy and x-ray fluorescence spectrometry. ...
Smalley's group employed the use of this method with time-of-flight mass spectrometry by analyzing Al clusters. With the work ... They used laser-induced fluorescence to characterize multiple molecules like SnBi and SiC2. ...
The composition of the coins was later verified using the traditional wet method and X-ray fluorescence spectrometry. ...
Fluorescence polarization immunoassay is widely used. This test is slower and has a lower sensitivity than digoxin immunoassay ... Electrospray Tandem Mass Spectrometry". Journal of Agricultural and Food Chemistry. 53 (11): 4322-5. doi:10.1021/jf050201s. ... Digoxin III). A direct analytic technique like liquid chromatography-electrospray tandem mass spectrometry is used when there ...
Mass spectrometry is seen as the most relevant new spectrometry technique. Several manufacturers have products that are under ... or quench the fluorescence of a polymer. Chemiluminescence was used frequently in the 1990s, but is less common than the ... include ion trap mobility spectrometry (ITMS), and differential mobility spectrometry (DMS). Amplifying fluorescent polymers ( ... The most common technology for this application, as seen in US airports, is ion mobility spectrometry (IMS). This method is ...
Additionally, HPLC, mass spectrometry, and fluorescence spectroscopy can be employed to measure the amount of iso-alpha acids ...
An HPLC method with post-column reaction with alkali and fluorescence has been developed to determine tetrodotoxin and its ... The alkali degradation products can be confirmed as their trimethylsilyl derivatives by gas chromatography/mass spectrometry.[ ...
Light sheet fluorescence microscopy for the observation of development and LILBID mass spectrometry for the analysis of ... Native mass spectrometry has emerged as an important tool in structural biology. Advantages of mass spectrometry compared to ... Using mass spectrometry, a global analysis of the ubiquitinome of Salmonella-infected cells was carried out, that enabled CEF ... Mass spectrometry analysis revealed that SidJ is a glutamylase that modifies the catalytic glutamate in the mono-ADP ribosyl ...
Ultraviolet fluorescence and infrared analysis are used to detect repairs or earlier painting present on canvasses. Atomic ... Pyrolysis-gas chromatography-mass spectrometry (Py-GC-MS) can be used to analyze the paint-binding medium. Similar to AAS and ... X-ray fluorescence (bathing the object with radiation causes it to emit X-rays) which can reveal if the metals in a metal ... Absorption Spectrophotometry (AAS) and Inductively Coupled Plasma Mass Spectrometry (ICP-MS) are used to detect anomalies in ...
SPIE 1843: 315-322 (1992). Michael Robert Descour, "Non-scanning imaging spectrometry", PhD Thesis, University of Arizona (1994 ... "Large-image-format computed tomography imaging spectrometer for fluorescence microscopy". Optics Express. 9 (9): 444. doi: ... Imaging Spectrometry IX. SPIE. 5159: 380-391. doi:10.1117/12.506426. Descour, Michael; Dereniak, Eustace (1995-08-01). " ... "Computed Tomography-Based Spectral Imaging For Fluorescence Microscopy". Biophysical Journal. 80 (2): 986-993. doi:10.1016/ ...
X-ray fluorescence spectroscopy can confirm the presence of bromine (Br), but it does not indicate the BFR concentration or ... Ion attachment mass spectrometry (IAMS) can be used to measure BFR concentrations in plastics. The BFR ban has significantly ... REACH Battery Directive Electronic waste Green computing Ion attachment mass spectrometry - used to enforce RoHS limits on ...
These include scanning electron microscopy-x-ray spectroscopy, x-ray fluorescence spectroscopy, mass spectrometry, optical ...
X-ray fluorescence and absorption spectrometry. In 1966 he was appointed Deputy Director of the NPL. He was elected a Fellow of ...
Meanwhile, the taurine-fluorescence-HPLC assay used for cyanide detection is identical to the assay used to detect glutathione ... Cyanide and thiocyanate assays have been run with mass spectrometry (LC/MS/MS), which are considered specific tests. Since ... and the taurine fluorescence-HPLC but like all colorimetric assays these are prone to false positives. Lipid peroxidation ...
Affinity purification coupled to mass spectrometry[edit]. Main article: Mass spectrometry. Affinity purification coupled to ... These include co-immunoprecipitation, protein microarrays, analytical ultracentrifugation, light scattering, fluorescence ... "Mass Spectrometry Reviews. 38 (1): 79-111. doi:10.1002/mas.21574. ISSN 0277-7037. PMID 29957823.. ... Chen GI, Gingras AC (July 2007). "Affinity-purification mass spectrometry (AP-MS) of serine/threonine phosphatases". Methods. ...
... or more reliably by gas chromatography combined with mass spectrometry (GC/MS). Liquid chromatography (LC) techniques are also ... to determine mRNA levels by reverse transcriptase-polymerase chain reaction from leukocyte subsets purified by fluorescence- ... "Analysis of alkamides in roots and achenes of Echinacea purpurea by liquid chromatography-electrospray mass spectrometry". ...
DNA damage is considered to be the primary underlying cause of malignant neoplasms known as cancers.[18] Its central role in progression to cancer is illustrated in the figure in this section, in the box near the top. (The central features of DNA damage, epigenetic alterations and deficient DNA repair in progression to cancer are shown in red.) DNA damage is very common. Naturally occurring DNA damages (mostly due to cellular metabolism and the properties of DNA in water at body temperatures) occur at a rate of more than 60,000 new damages, on average, per human cell, per day[citation needed] [also see article DNA damage (naturally occurring) ]. Additional DNA damages can arise from exposure to exogenous agents. Tobacco smoke causes increased exogenous DNA damage, and these DNA damages are the likely cause of lung cancer due to smoking.[19] UV light from solar radiation causes DNA damage that is important in melanoma.[20] Helicobacter pylori infection produces high levels of reactive oxygen ...
Immunostaining of cells on slides by Microscopy (ImmunoHistoChemistry or Fluorescence), on microplates by photometry including ... in Mass Spectrometry. Generally there are multiple separate steps done before an assay and are called preanalytic processing. ... or a blocking reagent in a binding reaction that prevents nonspecific binding or a quenching reagent in a fluorescence ...
DNA damage is considered to be the primary underlying cause of malignant neoplasms known as cancers.[18] Its central role in progression to cancer is illustrated in the figure in this section, in the box near the top. (The central features of DNA damage, epigenetic alterations and deficient DNA repair in progression to cancer are shown in red.) DNA damage is very common. Naturally occurring DNA damages (mostly due to cellular metabolism and the properties of DNA in water at body temperatures) occur at a rate of more than 60,000 new damages, on average, per human cell, per day[citation needed] [also see article DNA damage (naturally occurring) ]. Additional DNA damages can arise from exposure to exogenous agents. Tobacco smoke causes increased exogenous DNA damage, and these DNA damages are the likely cause of lung cancer due to smoking.[19] UV light from solar radiation causes DNA damage that is important in melanoma.[20] Helicobacter pylori infection produces high levels of reactive oxygen ...
This is the mechanism of fluorescence and thermal emission. A photon with the correct wavelength to be absorbed by a transition ... Gould's notes included possible applications for a laser, such as spectrometry, interferometry, radar, and nuclear fusion. He ... to excite fluorescence as a white light source. This permits a much smaller emitting area due to the much greater radiance of a ... making them candidates for use in fluorescence suppressed Raman spectroscopy. ...
... s have useful absorption, photoluminescence (fluorescence), and Raman spectroscopy properties. Spectroscopic ... Characterization of single-wall carbon nanotubes using scanning electron microscopy and energy dispersive X-ray spectrometry ... coupled with energy dispersive X-ray spectrometry analysis.[94][95] ... UV-visible-near infrared fluorescence spectroscopy and absorption spectroscopy, scanning electron microscopy, and transmission ...
... , obtained from an 80 kg sample of Carrara marble, is used as the IAEA-603 isotopic standard in mass spectrometry for ... Manganese may be responsible for the fluorescence of impure calcite, as may traces of organic compounds. Ancient Egyptians ... Calcite is transparent to opaque and may occasionally show phosphorescence or fluorescence. A transparent variety called " ...
... a mass spectrometry approach". Journal of the American Society for Mass Spectrometry. 21 (9): 1633-42. doi:10.1016/j.jasms. ... Chen BH, Wang CC, Lu LY, Hung KS, Yang YS (Feb 2013). "Fluorescence assay for protein post-translational tyrosine sulfation". ... the crystallized structure of the catalytic region of TPST-2 and different experiments other methods using mass spectrometry ...
Release of AMC fluorescence by DUB enzymes can be monitored using 380 nm excitation and 460 nm emission wavelengths. Substrate ... Substrate profiling of deubiquitin hydrolases with a positional scanning library and mass spectrometry. Biochemistry, 43, 6535- ...
Mass Spectrometry: ICP-MS Inductively coupled plasma: ICP-OES Atomic Spectrometry: AAS , AFS , Microwave Molecular Spectroscopy ... fluorescence reader, spectrophotometer and liquid handling Kits for manual or automated nucleic acid isolation as well as ... With this acquisition, the Company entered the rapidly growing global ICP-MS (Inductively Coupled Plasma Mass Spectrometry) ... marked the beginning of the research and development of analytical systems in the area of atomic absorption spectrometry and ...
Time-resolved mass spectrometry Terahertz time-domain spectroscopy Ultrafast laser spectroscopy Surface states Attophysics ... Coherent anti-Stokes Raman or two-photon-excited fluorescence. The fascinating in Ultrafast scanning electron microscopy is how ...
... to human chromosome 12q24.3 and rat chromosome 12 by somatic cell hybrid panels and fluorescence in situ hybridization". ... "Large-scale mapping of human protein-protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/ ...
"Using Tandem Mass Spectrometry for Metabolic Disease Screening Among Newborns". www.cdc.gov. Centers for Disease Control (CDC ... The development of molecular cytogenetics involving techniques such as fluorescence in situ hybridization (FISH) followed, ...
Jenkins, R. A.; De Vries, J. L. (1982). Practical X-Ray Spectrometry. Springer. ISBN 978-1-468-46282-1. Kosasih, Felix Utama; ... X-ray beam excitation is used in X-ray fluorescence (XRF) spectrometers. A detector is used to convert X-ray energy into ...
Using Southern blotting and fluorescence in situ hybridization (FISH) on the genome, the researchers found no evidence of DNA ... They also performed mass spectrometry on the translated protein to verify that the chimeric RNA is translated into protein. ...
"X-Ray Fluorescence (XRF): Understanding Characteristic X-Rays" (PDF). Archived from the original (PDF) on 28 December 2013. ... K-alpha line in copper is frequently used as the primary source of X-ray radiation in lab-based X-ray diffraction spectrometry ... This property is used in various techniques, including X-ray fluorescence spectroscopy, particle-induced X-ray emission, energy ...
... on the statue and with the assistance of technology such as ultraviolet-visual absorption spectrometry and X-ray fluorescence ...
In addition to neutron activation, the laboratory maintains and operates several X-ray fluorescence spectrometers, multiple ICP ... spectrometers, and a multi-collector ICP-MS for isotope-ratio mass spectrometry. The laboratory is one of only a handful of ...
Traditional visible region spectrophotometers cannot detect if a colorant or the base material has fluorescence. This can make ... emission spectroscopy Inductively coupled plasma atomic emission spectroscopy Inductively coupled plasma mass spectrometry LBOZ ... Where a colorant contains fluorescence, a bi-spectral fluorescent spectrophotometer is used. There are two major setups for ...
Using fluorescence in-situ hybridization, the full length 90K cDNA has been localized to chromosome 17q25. The native protein ... stable isotope labeling and mass spectrometry". Nat. Biotechnol. 21 (6): 660-6. doi:10.1038/nbt827. PMID 12754519. S2CID 581283 ...
Developments in mass spectrometry led to the adoption of oxygen-16 as the standard substance, in lieu of natural oxygen.[ ... 1991). "Low-cost, high-sensitivity laser-induced fluorescence detection for DNA sequencing by capillary gel electrophoresis". ...
Once being incorporated, one can use fluorescence-detection techniques to visualize the location of new PG formation as well as ... mass spectrometry, flow cytometry. FDAA consists of a D-amino acid and a fluorophore (coupled through the amino acid side chain ...
PEG is often used (as an internal calibration compound) in mass spectrometry experiments, with its characteristic fragmentation ... been used to passivate microscope glass slides for avoiding non-specific sticking of proteins in single-molecule fluorescence ... Mw and Mn can be measured by mass spectrometry. PEGylation is the act of covalently coupling a PEG structure to another larger ...
... head Total effective dose equivalent Total external reflection Total internal reflection Total internal reflection fluorescence ... flywheel effect Thermal hydraulics Thermal inertia Thermal insulation Thermal ionization Thermal ionization mass spectrometry ...
X-ray fluorescence offers rapid and non-destructive determination of the elemental composition of a nuclear material based on ... The sputtered, secondary ions are directed onto the mass spectrometry system to be measured. The secondary ions are a result of ... This is well above mass spectrometry.[citation needed] This technique tends to be hindered by matrix affects, which must be ... For nuclear forensic purposes it is essential that the mass spectrometry offers excellent resolution in order to distinguish ...
These techniques include: X-ray fluorescence (XRF) inductively coupled plasma mass spectrometry (ICP-MS) neutron activation ...
Start Over You searched for: Subjects Spectrometry, Fluorescence ✖Remove constraint Subjects: Spectrometry, Fluorescence ... 1. Fluorescence of the uranyl salts Author(s): Nichols, E. L. (Edward Leamington), 1854-1937, author. Howes, H. L. (Horace ...
"X-ray fluorescence spectrometry (XRF)". 0-9. A. B. C. D. E. F. G. H. I. J. K. L. M. N. O. P. Q. R. S. T. U. V. W. X. Y. Z. * 0- ...
... determination of heavy metals in electronic cigarette refill liquids using Total Reflection X-ray Fluorescence Spectrometry. ... determination of heavy metals in electronic cigarette refill liquids using Total Reflection X-ray Fluorescence Spectrometry ...
The NanoSIMS was shown to faithfully reproduce the information from fluorescence microscopy, but at a much higher spatial ... with fluorescence microscopy to provide subcellular information on the location of small molecules in cultured cells. We ... by comparing the distribution of 5-bromo-2-deoxyuridine in the same cells given by both NanoSIMS analysis and by fluorescence ... ensured that the images formed by SIMS mapping of bromine ions could be co-registered exactly with images from fluorescence ...
... Date. ... N. Ertas, E. Akkaya, and O. Y. Ataman, "Simultaneous determination of Cd and Zn by fluorescence spectrometry using a novel ... Simultaneous determination of cadmium and zinc using a fiber optic device and fluorescence spectrometry. ... Effect of experimental variables on fluorescence intensities and on the spectral behavior of the metal-ligand in several types ...
... *Shiel was a Bachelor of Science download X with systems from ... download X Ray Fluorescence Spectrometry (XRF) in Geoarchaeology and career Joab Tzur has an own evil source that is quicker ... download X Ray Fluorescence Spectrometry (XRF): A finding down of something of the Semantic New to include and gander Topics ... download X Ray Fluorescence Spectrometry (XRF) in above for all the genes. You are download stands not see! That script ...
X-ray Fluorescence (XRF) Spectrometry. XRF was used to measure the elemental components of soil samples. All XRF data were ... Total partial fluorescence yield (PFY) counts of all spectra (10-15 kpc) were well below the detector saturation limit (20-30 ... Most mass spectrometry (MS) techniques and liquid-state 13C nuclear magnetic resonance (NMR) spectroscopy require the ...
X-ray fluorescence (XRF) spectrometry. X-ray fluorescence (XRF) spectrometry detects elemental composition by measuring the ... Inductively coupled plasma-mass spectrometry (ICP-MS). Inductively coupled plasma mass spectrometry (ICP-MS) is a type of mass ... The X-rays emitted by the atoms during the process of fluorescence are detected and used for sample identification and ... spectrometry used for the highly sensitive quantification of various metals and non-metals in the concentration range of below ...
X-ray Fluorescence Spectrometry (XRF). XRF is ideal for rapid and accurate whole bulk elemental analysis in rock or soil ...
E2926-17 Standard Test Method for Forensic Comparison of Glass Using Micro X-ray Fluorescence (µ-XRF) Spectrometry ... E2999-17 Standard Test Method for Analysis of Organic Compounds in Smokeless Powder by Gas Chromatography-Mass Spectrometry and ... E3296-22 Standard Guide for Using Pyrolysis Gas Chromatography and Pyrolysis Gas Chromatography-Mass Spectrometry in Forensic ... E1588-20 Standard Practice for Gunshot Residue Analysis by Scanning Electron Microscopy/Energy Dispersive X-Ray Spectrometry ...
BBA, bead-based assay; EV, extracellular vesicle; LC-MS/MS, liquid chromatography-tandem mass spectrometry; MFI, median ... fluorescence intensity; NTA, nanoparticle tracking analysis; SEC, size-exclusion chromatography.. Main Article ...
Fluorescence spectrometry; Author Keywords: Pesticide; Smartphone; Fluorescence; Aptasensor; Spectrum reader ...
The interaction of the WSG with the PLA(2) is confirmed by fluorescence quenching and gel-permeation chromatography. Chemical ... Spectrometry, Fluorescence * Withania / chemistry* Substances * Cobra Neurotoxin Proteins * Elapid Venoms * Glycoproteins * ...
New and existing sources for atomic emission, absorption, fluorescence and mass spectrometry and those that provide both atomic ... For authors who want to publish their article gold open access, Journal of Analytical Atomic Spectrometry charges an article ... Journal of Analytical Atomic Spectrometry is a hybrid journal and gives authors the choice of publishing their research either ... The Journal of Analytical Atomic Spectrometry (JAAS) is the central journal for publishing innovative research on fundamentals ...
IP PM ET: Crude Oil - Determination of sulfur content - Wavelength-dispersive X-ray fluorescence spectrometry. Document options ...
Insights from Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS), Fluorescence Titration and Molecular Docking Studies. ... Insights from Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS), Fluorescence Titration and Molecular Docking Studies.. ... Insights from Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS), Fluorescence Titration and Molecular Docking Studies.. ... Insights from Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS), Fluorescence Titration and Molecular Docking Studies. ...
Method using hydride generation atomic fluorescence spectrometry (HG-AFS) ... Water quality - Determination of selenium - Part 1: Method using hydride generation atomic fluorescence spectrometry (HG-AFS). ...
Detection of dietary external markers using portable X-ray fluorescence spectrometry for estimation of digestibility in beef ...
A new portable XRF system is described as an alternative for the traditionally applied K-X-ray fluorescence technology for in ... and scanning electron microscopy with energy-dispersive spectrometry (SEM-EDS), which showed only minor contents of other ...
... Edinburgh Instruments. in Product Guide Imaging Widefield Fluorescence Imaging Lab Equipment CO/ ... CO2 Gas Lasers Fluorescence Lifetime Spectrometers Fluorometers Lifetime and Phosphorescence Spectrometers Spectrofluorometers ...
... of coproporphyrin and protoporphyrin in feces by derivative matrix isopotential synchronous fluorescence spectrometry. Clin ... To assess for cutaneous porphyria, the plasma porphyrin level should be measured, using fluorescence emission spectroscopy. ... To assess for cutaneous porphyria, the plasma porphyrin level should be measured, using fluorescence emission spectroscopy. ... For example, in congenital erythropoietic porphyria, pink fluorescence of the amniotic fluid examined fortuitously in sunlight ...
Spectrometry, Fluorescence. Yang L, Broderick D, Campbell Y, Gombart AF, Stevens JF, Jiang Y, Hsu VL, Bisson WH, Maier CS. 2016 ... Insights from hydrogen deuterium exchange mass spectrometry (HDX-MS), fluorescence titration and molecular docking studies.. ... Insights from hydrogen deuterium exchange mass spectrometry (HDX-MS), fluorescence titration and molecular docking studies.. ... Insights from hydrogen deuterium exchange mass spectrometry (HDX-MS), fluorescence titration and molecular docking studies.. ...
Fluorescence Microscopy. *Immunological Techniques. *Mass Spectrometry. *Protein Microarray. Segmentation by Labelling ...
We performed an untargeted plasma metabolic profiling (gas chromatography and capillary electrophoresis-mass spectrometry (GC ... We performed an untargeted plasma metabolic profiling (gas chromatography and capillary electrophoresis-mass spectrometry (GC ... Garcia A, Barbas C. Gas Chromatography-Mass Spectrometry (GC-MS)-Based Metabolomics. Methods Mol Biol (2011) 708:191-204. doi: ... fluorescence intensity; IDO, indoleamine-pyrrole 2,3-dioxygenase; LOOCV, leave-one-out cross-validation; GC-MS, like gas ...
... is a micro-focus X-ray fluorescence instrument for examining fine scale chemical variations in rocks and soils on planetary ... Major ion geochemistry in Na-Ca-Mg-K-Cl-SO4 brines using portable X-ray fluorescence spectrometry. *E. Kipnis, B. Bowen, Sean J ... Performance of a Borehole X-Ray Fluorescence Spectrometer for Planetary Exploration. *W. Kelliher, I. A. Carlberg, W. Elam, E. ... Determination of X-ray fluorescence sample geometry from compton backscatter energy. *K. Nielson, V. Rogers, R. Shuman ...
... with detection by inductively coupled plasma mass spectrometry (ICP-MS) or hydride generation atomic fluorescence spectrometry ... Water quality - Determination of selenium - Part 1: Method using hydride generation atomic fluorescence spectrometry (HG-AFS) ... Method using hydride generation atomic fluorescence spectrometry (HG-AFS) ... Water quality - Determination of 15 polycyclic aromatic hydrocarbons (PAH) in water by HPLC with fluorescence detection after ...
B1 albumin adducts assessed by isotope dilution mass spectrometry and high-performance liquid chromatography-fluorescence. ... Published results showed that isotope dilution LC-MS/MS was the most sensitive technique and HPLC-fluorescence was the least ... An isotope dilution mass spectrometry based method (LC-MS/MS triple quadrupole MS using electrospray ionization) was used for ... The two chromatographic methods showed satisfactory agreement (LC-MS/MS = HPLC-fluorescence ÷ 0.71). In summary, the results ...
  • To assess for cutaneous porphyria, the plasma porphyrin level should be measured, using fluorescence emission spectroscopy. (medscape.com)
  • This study aims to develop methods for determination of Ca, K, Mg and Na by laser-induced breakdown spectroscopy (LIBS) and Ca, K, Mg, Na, P, S, Fe and Zn by wavelength dispersive X-ray fluorescence (WDXRF) in pressed pellets bivalve mollusks. (usda.gov)
  • The interdisciplinary range of methods includes NMR, mass spectrometry and proteomics, crystallography, cryoEM/ET, fluorescence spectroscopy and microscopy. (uu.nl)
  • X-ray fluorescence (XRF) spectroscopy is increasingly the analytical tool of choice for the direct measurement of the concentration of atomic elements in a wide range of materials. (rigakuedxrf.com)
  • With the widespread availability and use of the personal computer (PC) as the industry standard platform in the mid-1980s, X-ray fluorescence spectroscopy became a simpler and lower cost-of-ownership alternative to earlier atomic spectroscopy analytical techniques. (rigakuedxrf.com)
  • Samples were also screened for PACs containing 4- to 6-rings using fluorescence spectroscopy. (cdc.gov)
  • The binding-induced conformational change in the protein was investigated using circular dichroism, synchronous fluorescence, 3D fluorescence and FTIR spectroscopy results. (jascoinc.com)
  • The MC of the enamel was determined before and after bleaching using Fourier transform (FT-Raman) spectroscopy and micro energy-dispersive x-ray fluorescence spectrometry (μEDXRF). (bvsalud.org)
  • This method had its basis in fluorescence spectroscopy and focused on the time-dependent change in emission of fluorescent light from the plant's chlorophyll. (fossanalytics.com)
  • For Kristian and three of his colleagues, this new discovery resulted in the birth of a university spin-out company, NutriNostica ApS, which sells fluorescence spectroscopy equipment to farmers, agricultural consultants, fertilizer companies and researchers. (fossanalytics.com)
  • The interaction of the WSG with the PLA(2) is confirmed by fluorescence quenching and gel-permeation chromatography. (nih.gov)
  • We performed an untargeted plasma metabolic profiling (gas chromatography and capillary electrophoresis-mass spectrometry (GC and CE-MS)) and cytokine evaluation. (frontiersin.org)
  • For all samples, a fully validated high-pressure liquid chromatography procedure with fluorescence detection was used. (erowid.org)
  • The found substances were also identified with liquid chromatography-tandem mass spectrometry. (erowid.org)
  • The coumarin tag is small and stable, which makes a subsequent liquid chromatography-mass spectrometry (LC‐MS)‐based protein identification possible. (chemistryviews.org)
  • Tandem Mass Tag Labeling Facilitates Reversed-Phase Liquid Chromatography-Mass Spectrometry Analysis of Hydrophilic Phosphopeptides. (harvard.edu)
  • Therapeutic drug monitoring is performed routinely by liquid chromatography-mass spectrometry (LC-MS) using instrumentation and methods originally developed and systematically configured for the high-volume, high-throughput analysis of drugs of abuse. (spectroscopyonline.com)
  • Liquid chromatography-mass spectrometry (LC-MS) has been an important analytical tool in support of drug discovery and drug development for some time. (spectroscopyonline.com)
  • Avantor has the resources to make your Chromatography or Mass Spectrometry applications run efficiently and effectively-from the measuring apparatus needed for chromatography, or the proteins used to fulfill sample manipulation during mass spectrometry. (vwrcanlab.com)
  • Development of a new bimodal imaging methodology: a combination of fluorescence microscopy and high-resolution secondary ion mass spectrometry. (ox.ac.uk)
  • In this paper, we present a new experimental methodology to combine mass spectrometry (NanoSIMS) with fluorescence microscopy to provide subcellular information on the location of small molecules in cultured cells. (ox.ac.uk)
  • The headspace vapors are analyzed using GC-mass spectrometry (MS), which provides a detection sensitivity of between 1 and 5 nM (0.056 and 0.28 g/L) acrolein in urine. (cdc.gov)
  • Inductively coupled plasma mass spectrometry (ICP-MS) is a type of mass spectrometry used for the highly sensitive quantification of various metals and non-metals in the concentration range of below 1 part per trillion (ppt). (sigmaaldrich.com)
  • Conformational Modulation of the Farnesoid X Receptor by Prenylflavonoids: Insights from Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS), Fluorescence Titration and Molecular Docking Studies. (oregonstate.edu)
  • We combined Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS) with computational studies for dissecting molecular recognition and conformational impact of prenylflavonoid interactions on the ligand binding domain (LBD) of human FXR. (oregonstate.edu)
  • An isotope dilution mass spectrometry based method (LC-MS/MS triple quadrupole MS using electrospray ionization) was used for routine quantitation of AFB-lys as a measure of individual exposure to aflatoxin B1. (cdc.gov)
  • Journal of the American Society for Mass Spectrometry. (wisc.edu)
  • International Journal of Mass Spectrometry. (wisc.edu)
  • Rapid Communications in Mass Spectrometry. (wisc.edu)
  • Here, we develop a sensitive method for glucose-containing disaccharide analysis by 1-(4-carboxyphenyl)-3-methyl-5-pyrazolone (CPMP) derivatization using mass spectrometry. (usda.gov)
  • Mass spectrometry provides an additional certainty by associating specific mass fragments to a target compound, allowing more confidence in the customer's results. (joomag.com)
  • Each of our peptides is accompanied by reliable HPLC and mass spectrometry data, detailed synthesis reports are provided, and the products are sent in a lyophilized state. (sbsgenetech.com)
  • Using risofos multi-stage mass spectrometry or NMR but their lower volume also leads to unnecessarily long analysis times. (goldgreiner.de)
  • Fiducial markers in the substrates ensured that the images formed by SIMS mapping of bromine ions could be co-registered exactly with images from fluorescence microscopy. (ox.ac.uk)
  • The NanoSIMS was shown to faithfully reproduce the information from fluorescence microscopy, but at a much higher spatial resolution. (ox.ac.uk)
  • Herein we have used transversely-heated graphite furnace atomic absorption spectrometry to measure aluminum in the brain of a donor with Alzheimer's disease, and we have developed and validated fluorescence microscopy and the fluor lumogallion to show the presence of aluminum in the same tissue. (iospress.com)
  • Herein we have optimized the fluor, lumogallion, for the identification of aluminum in human brain tissue using fluorescence microscopy. (iospress.com)
  • We have measured the aluminum content of brain tissue donated by an individual with Alzheimer's disease and complemented these data with the unequivocal visual identification of aluminum using fluorescence microscopy. (iospress.com)
  • Regarding the methods, microhardness 2,5 , scanning electron and polarized light microscopy 7,14 , micro energy-dispersive x-ray fluorescence spectrometry (μEDXRF) 11 , Fourier transform-Raman (FTRaman) spectroscopy10 and atomic absorption spectrometer (AAS) 10 have been used to determine the adverse effects resulting from bleaching techniques. (bvsalud.org)
  • Method 6200 : field portable x-ray fluorescence spectrometry for the determination of elemental concentrations in soil and sediment. (epa.gov)
  • In X-ray fluorescence (XRF), an electron can be ejected from its atomic orbital by the absorption of a light wave (photon) of sufficient energy. (rigakuedxrf.com)
  • the extracted air is measured using infrared absorption spectrometry. (unibe.ch)
  • Most of these tracers are analysed by fluorescence or absorption spectrometry. (unibe.ch)
  • IMSEAR at SEARO: Absorption and fluorescence studies on interaction between cationic dyes and Klebsiella K7 capsular polysaccharide. (who.int)
  • ISO 21079-1:2008 specifies methods for the chemical analysis of AZS (alumina, zirconia, and silica) refractory products (containing 5 % to 45 % of ZrO 2 ) and raw materials, using traditional ("wet") methods, inductively coupled plasma atomic emission (ICP-AE) spectrometry and flame atomic absorption (FAA) spectrometry. (iso.org)
  • From the introduction of commercial wavelength dispersive XRF spectrometers in the mid-1950s, to the development of energy dispersive X-ray fluorescence (EDXRF) instruments in the early 1970's, the increasing availability of affordable computational power was critical to the desirability and acceptance of the technique. (rigakuedxrf.com)
  • dilatam To use the dispersive, multichannel technique with array-detectors that provide fluorescence anafranil rejection. (goldgreiner.de)
  • The fractional factorial and Doehlert designs for optimization of a slurry sampling procedure to determine of nutrients in sugarcane juice by inductively coupled plasma optical emission spectrometry (ICP OES) were applied. (usda.gov)
  • The Fluorescence emission of GoodView bound to DNA is centered at 530 nm. (sbsgenetech.com)
  • Edinburgh Instruments has announced a new batch measurement option for its Fluoracle software for the FS5 Spectrofluorometer and FLS1000 Fluorescence Spectrometer. (photonics.com)
  • The Bruker AXS S4 Pioneer is a sequential X-ray Fluorescence Spectrometer designed for qualitative, semi-quantitative and quantitative elemental analysis of solids, liquids or powders. (uea.ac.uk)
  • We carried out non-destructive thickness and composition analysis of Zinc-Nickel coating on steel using the MESA-50 X-ray fluorescence analyzer. (horiba.com)
  • MESA-50 X-Ray Fluorescence Analyzer The worldwide RoHS, WEEE and ELV directives specify strict limits on the inclusio. (its-sciencemedical.com)
  • Cytogenetic studies included fluorescence in situ hybridization [‏FISH]‏ when indicated. (who.int)
  • In this thesis, I used a cohort of 421 lung cancer primary patient samples to screen prevalence of FGFR1 gene amplification among SQCLC and SCLC groups using fluorescence in situ hybridization technique (FISH). (uni-goettingen.de)
  • The spectral range is 200-1000 nm (Absorbance), 370-700 nm (Luminescence) and 230-900 nm (Fluorescence). (boku.ac.at)
  • Measurement of the intensity and quality of fluorescence. (bvsalud.org)
  • The Journal of Analytical Atomic Spectrometry ( JAAS ) is the central journal for publishing innovative research on fundamentals, instrumentation, and methods in the determination, speciation and isotopic analysis of (trace) elements within all fields of application. (rsc.org)
  • 4. Yating Qin, Hui Peng, Xiwen He, Wenyou Li* , Yukui Zhang, pH-Responsive Polymer-Stabilized ZIF-8 Nanocomposites for Fluorescence and Magnetic Resonance Dual-Modal Imaging-Guided Chemo-/Photodynamic Combinational Cancer Therapy, ACS Applied Materials & Interfaces , 2019, 11: 34268-34281. (dicp.ac.cn)
  • Upon binding Al 3 + and excitation at ca 500 nm, the 1 : 1 complex emits aluminum-specific fluorescence at ca 590 nm and these properties have already been adapted for the identification of aluminum in plant tissues [ 7 ] and recently to show the intracellular presence of aluminum in immune-reactive cells [ 8 ]. (iospress.com)
  • It emits green fluorescence when bound to DNA or RNA. (sbsgenetech.com)
  • In November 2018, the laboratory experienced instrumental problems with its fluorescence detector and post-column derivatization system that resulted in prolonged offsite repair and overhaul. (joomag.com)
  • Near-Infrared Fluorescence Imaging of Carotid Plaques in an Atherosclerotic Murine Model. (harvard.edu)
  • Simultaneous analysis was achieved by the significant perturbation in the fluorescence spectrum of the Cd-ligand complex while the Zn complex only results in enhancement in the fluorescence intensity as compared to ligand alone. (metu.edu.tr)
  • X-ray fluorescence (XRF) spectrometry detects elemental composition by measuring the wavelength and intensity of X-rays emitted by energized atoms in a sample. (sigmaaldrich.com)
  • Due to the photosensitivity of resveratrol (a major amount of trans-resveratrol is converted to cis-resveratrol during UV radiation), connection of a fluorescence detector in series with the photodiode-array detector is recommended to prevent decomposition by the strong excitation energy of the fluorescence detector. (shimadzu-webapp.eu)
  • Effect of experimental variables on fluorescence intensities and on the spectral behavior of the metal-ligand in several types of surfactants have been studied, The range of application is between 2.0 and 35 mu g/L for both zinc and cadmium. (metu.edu.tr)
  • We demonstrate this by comparing the distribution of 5-bromo-2-deoxyuridine in the same cells given by both NanoSIMS analysis and by fluorescence immunohistochemistry. (ox.ac.uk)
  • Microbialite Biosignature Analysis by Mesoscale X-ray Fluorescence (μXRF) Mapping. (semanticscholar.org)
  • Principles of quantitative X-ray fluorescence analysis / R. Tertian, F. Claisse. (who.int)
  • Temperature dependent fluorescence data showed the strength of the dye-protein complexation to be inversely proportional to temperature and the fluorescence quenching was static in nature. (jascoinc.com)
  • This new stain has two fluorescence excitation maxima when bound to nucleic acid, one centered at 268 nm and the other at 294 nm. (sbsgenetech.com)
  • 1.1 This test method covers the use of X-ray spectrometry to determine thickness of metallic and some nonmetallic coatings. (document-center.com)
  • In a second ERC Advanced Grant (deepSLice) H. Fischer and his group develop in collaboration with the group of L. Emmenegger at Empa a new Quantum Cascade Laser Spectrometry method for multicomponent greenhouse gas analyses on ice cores combined with a novel sublimation extraction system. (unibe.ch)
  • ISO 21079-1:2008 gives alternatives to the X-ray fluorescence (XRF) method given in ISO 12677. (iso.org)
  • be the download X Ray Fluorescence and principle community for the haste selectively as you would a t without an building. (southwayinc.com)
  • The X-rays emitted by the atoms during the process of fluorescence are detected and used for sample identification and quantitation. (sigmaaldrich.com)
  • The fluorescent probe 4,4-difluoro-5-(4-phenyl-1, 3-butadienyl)-4-bora-3a, 4a-diaza-s-indacene-3-undecanoic acidity (C11-BODIPY), found in the PLIR technique, modifies its fluorescence from reddish colored (FL2) to green (FL1)8,10 due to oxidation. (healthweblognews.info)