A poly(A) binding protein that has a variety of functions such as mRNA stabilization and protection of RNA from nuclease activity. Although poly(A) binding protein I is considered a major cytoplasmic RNA-binding protein it is also found in the CELL NUCLEUS and may be involved in transport of mRNP particles.
Proteins in the nucleus or cytoplasm that specifically bind RETINOIC ACID or RETINOL and trigger changes in the behavior of cells. Retinoic acid receptors, like steroid receptors, are ligand-activated transcription regulators. Several types have been recognized.
A group of adenine ribonucleotides in which the phosphate residues of each adenine ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
Proteins that bind to the 3' polyadenylated region of MRNA. When complexed with RNA the proteins serve an array of functions such as stabilizing the 3' end of RNA, promoting poly(A) synthesis and stimulating mRNA translation.
Enzymes that catalyze the transfer of multiple ADP-RIBOSE groups from nicotinamide-adenine dinucleotide (NAD) onto protein targets, thus building up a linear or branched homopolymer of repeating ADP-ribose units i.e., POLY ADENOSINE DIPHOSPHATE RIBOSE.
A group of cytosine ribonucleotides in which the phosphate residues of each cytosine ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
A family of synaptic vesicle-associated proteins involved in the short-term regulation of NEUROTRANSMITTER release. Synapsin I, the predominant member of this family, links SYNAPTIC VESICLES to ACTIN FILAMENTS in the presynaptic nerve terminal. These interactions are modulated by the reversible PHOSPHORYLATION of synapsin I through various signal transduction pathways. The protein is also a substrate for cAMP- and CALCIUM-CALMODULIN-DEPENDENT PROTEIN KINASES. It is believed that these functional properties are also shared by synapsin II.
A group of uridine ribonucleotides in which the phosphate residues of each uridine ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
Interferon inducer consisting of a synthetic, mismatched double-stranded RNA. The polymer is made of one strand each of polyinosinic acid and polycytidylic acid.
Transport proteins that carry specific substances in the blood or across cell membranes.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
A species of gram-negative, aerobic bacteria primarily found in purulent venereal discharges. It is the causative agent of GONORRHEA.
The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION.
An 11-kDa AT-hook motif-containing (AT-HOOK MOTIFS) protein that binds to the minor grove of AT-rich regions of DNA. It is the full-length product of the alternatively-spliced HMGA1 gene and may function as an architectural chromatin binding protein that is involved in transcriptional regulation.
Polydeoxyribonucleotides made up of deoxyadenine nucleotides and thymine nucleotides. Present in DNA preparations isolated from crab species. Synthetic preparations have been used extensively in the study of DNA.
A double-stranded polyribonucleotide comprising polyadenylic and polyuridylic acids.
A polynucleotide formed from the ADP-RIBOSE moiety of nicotinamide-adenine dinucleotide (NAD) by POLY(ADP-RIBOSE) POLYMERASES.
A group of guanine ribonucleotides in which the phosphate residues of each guanine ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
A group of inosine ribonucleotides in which the phosphate residues of each inosine ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
The process in which substances, either endogenous or exogenous, bind to proteins, peptides, enzymes, protein precursors, or allied compounds. Specific protein-binding measures are often used as assays in diagnostic assessments.
The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence.
A protein complex comprised of COATOMER PROTEIN and ADP RIBOSYLATION FACTOR 1. It is involved in transport of vesicles between the ENDOPLASMIC RETICULUM and the GOLGI APPARATUS.
A family of immunophilin proteins that bind to the immunosuppressive drugs TACROLIMUS (also known as FK506) and SIROLIMUS. EC 5.2.1.-
Proteins which bind to DNA. The family includes proteins which bind to both double- and single-stranded DNA and also includes specific DNA binding proteins in serum which can be used as markers for malignant diseases.
The sum of the weight of all the atoms in a molecule.
RNA sequences that serve as templates for protein synthesis. Bacterial mRNAs are generally primary transcripts in that they do not require post-transcriptional processing. Eukaryotic mRNA is synthesized in the nucleus and must be exported to the cytoplasm for translation. Most eukaryotic mRNAs have a sequence of polyadenylic acid at the 3' end, referred to as the poly(A) tail. The function of this tail is not known for certain, but it may play a role in the export of mature mRNA from the nucleus as well as in helping stabilize some mRNA molecules by retarding their degradation in the cytoplasm.
A poly(A) binding protein that is involved in promoting the extension of the poly A tails of MRNA. The protein requires a minimum of ten ADENOSINE nucleotides in order for binding to mRNA. Once bound it works in conjunction with CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR to stimulate the rate of poly A synthesis by POLY A POLYMERASE. Once poly-A tails reach around 250 nucleotides in length poly(A) binding protein II no longer stimulates POLYADENYLATION. Mutations within a GCG repeat region in the gene for poly(A) binding protein II have been shown to cause the disease MUSCULAR DYSTROPHY, OCULOPHARYNGEAL.
A group of thymine nucleotides in which the phosphate residues of each thymine nucleotide act as bridges in forming diester linkages between the deoxyribose moieties.
A subclass of retinol-binding proteins that take part in the intracellular storage and transport of RETINOL. They are both functionally and structurally distinct from PLASMA RETINOL-BINDING PROTEINS.
Proteins found in any species of bacterium.
Proteins that bind to RNA molecules. Included here are RIBONUCLEOPROTEINS and other proteins whose function is to bind specifically to RNA.
The parts of a macromolecule that directly participate in its specific combination with another molecule.
A family of soluble proteins that bind insulin-like growth factors and modulate their biological actions at the cellular level. (Int J Gynaecol Obstet 1992;39(1):3-9)
Proteins to which calcium ions are bound. They can act as transport proteins, regulator proteins, or activator proteins. They typically contain EF HAND MOTIFS.
Proteins which bind with RETINOL. The retinol-binding protein found in plasma has an alpha-1 mobility on electrophoresis and a molecular weight of about 21 kDa. The retinol-protein complex (MW=80-90 kDa) circulates in plasma in the form of a protein-protein complex with prealbumin. The retinol-binding protein found in tissue has a molecular weight of 14 kDa and carries retinol as a non-covalently-bound ligand.
'Nerve tissue proteins' are specialized proteins found within the nervous system's biological tissue, including neurofilaments, neuronal cytoskeletal proteins, and neural cell adhesion molecules, which facilitate structural support, intracellular communication, and synaptic connectivity essential for proper neurological function.
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
A group of 13 or more deoxyribonucleotides in which the phosphate residues of each deoxyribonucleotide act as bridges in forming diester linkages between the deoxyribose moieties.
Electrophoresis in which a polyacrylamide gel is used as the diffusion medium.
Established cell cultures that have the potential to propagate indefinitely.
The rate dynamics in chemical or physical systems.
Proteins which are found in membranes including cellular and intracellular membranes. They consist of two types, peripheral and integral proteins. They include most membrane-associated enzymes, antigenic proteins, transport proteins, and drug, hormone, and lectin receptors.
The insertion of recombinant DNA molecules from prokaryotic and/or eukaryotic sources into a replicating vehicle, such as a plasmid or virus vector, and the introduction of the resultant hybrid molecules into recipient cells without altering the viability of those cells.
Intracellular proteins that reversibly bind hydrophobic ligands including: saturated and unsaturated FATTY ACIDS; EICOSANOIDS; and RETINOIDS. They are considered a highly conserved and ubiquitously expressed family of proteins that may play a role in the metabolism of LIPIDS.
A family of low-molecular weight, non-histone proteins found in chromatin.
Proteins isolated from the outer membrane of Gram-negative bacteria.
Endogenous substances, usually proteins, which are effective in the initiation, stimulation, or termination of the genetic transcription process.
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
The biosynthesis of RNA carried out on a template of DNA. The biosynthesis of DNA from an RNA template is called REVERSE TRANSCRIPTION.
DNA sequences which are recognized (directly or indirectly) and bound by a DNA-dependent RNA polymerase during the initiation of transcription. Highly conserved sequences within the promoter include the Pribnow box in bacteria and the TATA BOX in eukaryotes.
Proteins prepared by recombinant DNA technology.
Any of the processes by which nuclear, cytoplasmic, or intercellular factors influence the differential control (induction or repression) of gene action at the level of transcription or translation.
An enzyme that catalyzes the synthesis of polyadenylic acid from ATP. May be due to the action of RNA polymerase (EC 2.7.7.6) or polynucleotide adenylyltransferase (EC 2.7.7.19). EC 2.7.7.19.
A family of nonbiting midges, in the order DIPTERA. Salivary glands of the genus Chironomus are used in studies of cellular genetics and biochemistry.
One of the six homologous soluble proteins that bind insulin-like growth factors (SOMATOMEDINS) and modulate their mitogenic and metabolic actions at the cellular level.
A group of 13 or more ribonucleotides in which the phosphate residues of each ribonucleotide act as bridges in forming diester linkages between the ribose moieties.
A 700-kDa cytosolic protein complex consisting of seven equimolar subunits (alpha, beta, beta', gamma, delta, epsilon and zeta). COATOMER PROTEIN and ADP-RIBOSYLATION FACTOR 1 are principle components of COAT PROTEIN COMPLEX I and are involved in vesicle transport between the ENDOPLASMIC RETICULUM and the GOLGI APPARATUS.
Periplasmic proteins that scavenge or sense diverse nutrients. In the bacterial environment they usually couple to transporters or chemotaxis receptors on the inner bacterial membrane.
Partial proteins formed by partial hydrolysis of complete proteins or generated through PROTEIN ENGINEERING techniques.
Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations.
Domesticated bovine animals of the genus Bos, usually kept on a farm or ranch and used for the production of meat or dairy products or for heavy labor.
The introduction of a phosphoryl group into a compound through the formation of an ester bond between the compound and a phosphorus moiety.
Recombinant proteins produced by the GENETIC TRANSLATION of fused genes formed by the combination of NUCLEIC ACID REGULATORY SEQUENCES of one or more genes with the protein coding sequences of one or more genes.
Cells propagated in vitro in special media conducive to their growth. Cultured cells are used to study developmental, morphologic, metabolic, physiologic, and genetic processes, among others.
A group of acidic proteins that are major components of SECRETORY GRANULES in the endocrine and neuroendocrine cells. They play important roles in the aggregation, packaging, sorting, and processing of secretory protein prior to secretion. They are cleaved to release biologically active peptides. There are various types of granins, usually classified by their sources.
A 12-KDa tacrolimus binding protein that is found associated with and may modulate the function of calcium release channels. It is a peptidyl-prolyl cis/trans isomerase which is inhibited by both tacrolimus (commonly called FK506) and SIROLIMUS.
Proteins found in the nucleus of a cell. Do not confuse with NUCLEOPROTEINS which are proteins conjugated with nucleic acids, that are not necessarily present in the nucleus.
A family of secreted multidomain proteins that were originally identified by their association with the latent form of TRANSFORMING GROWTH FACTORS. They interact with a variety of EXTRACELLULAR MATRIX PROTEINS and may play a role in the regulation of TGB-beta bioavailability.
The first continuously cultured human malignant CELL LINE, derived from the cervical carcinoma of Henrietta Lacks. These cells are used for VIRUS CULTIVATION and antitumor drug screening assays.
Tryptamine substituted with two hydroxyl groups in positions 5 and 7. It is a neurotoxic serotonin analog that destroys serotonergic neurons preferentially and is used in neuropharmacology as a tool.
The degree of similarity between sequences of amino acids. This information is useful for the analyzing genetic relatedness of proteins and species.
Organic compounds that generally contain an amino (-NH2) and a carboxyl (-COOH) group. Twenty alpha-amino acids are the subunits which are polymerized to form proteins.
Identification of proteins or peptides that have been electrophoretically separated by blot transferring from the electrophoresis gel to strips of nitrocellulose paper, followed by labeling with antibody probes.
The uptake of naked or purified DNA by CELLS, usually meaning the process as it occurs in eukaryotic cells. It is analogous to bacterial transformation (TRANSFORMATION, BACTERIAL) and both are routinely employed in GENE TRANSFER TECHNIQUES.
Phosphoproteins are proteins that have been post-translationally modified with the addition of a phosphate group, usually on serine, threonine or tyrosine residues, which can play a role in their regulation, function, interaction with other molecules, and localization within the cell.
One of the six homologous soluble proteins that bind insulin-like growth factors (SOMATOMEDINS) and modulate their mitogenic and metabolic actions at the cellular level.
The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain).
A type of chromogranin which was first isolated from CHROMAFFIN CELLS of the ADRENAL MEDULLA but is also found in other tissues and in many species including human, bovine, rat, mouse, and others. It is an acidic protein with 431 to 445 amino acid residues. It contains fragments that inhibit vasoconstriction or release of hormones and neurotransmitter, while other fragments exert antimicrobial actions.
Proteins that are secreted into the blood in increased or decreased quantities by hepatocytes in response to trauma, inflammation, or disease. These proteins can serve as inhibitors or mediators of the inflammatory processes. Certain acute-phase proteins have been used to diagnose and follow the course of diseases or as tumor markers.
A general transcription factor that plays a major role in the activation of eukaryotic genes transcribed by RNA POLYMERASES. It binds specifically to the TATA BOX promoter element, which lies close to the position of transcription initiation in RNA transcribed by RNA POLYMERASE II. Although considered a principal component of TRANSCRIPTION FACTOR TFIID it also takes part in general transcription factor complexes involved in RNA POLYMERASE I and RNA POLYMERASE III transcription.
Acute infectious disease characterized by primary invasion of the urogenital tract. The etiologic agent, NEISSERIA GONORRHOEAE, was isolated by Neisser in 1879.
The biosynthesis of PEPTIDES and PROTEINS on RIBOSOMES, directed by MESSENGER RNA, via TRANSFER RNA that is charged with standard proteinogenic AMINO ACIDS.
TRANSPORT VESICLES formed when cell-membrane coated pits (COATED PITS, CELL-MEMBRANE) invaginate and pinch off. The outer surface of these vesicles is covered with a lattice-like network of COP (coat protein complex) proteins, either COPI or COPII. COPI coated vesicles transport backwards from the cisternae of the GOLGI APPARATUS to the rough endoplasmic reticulum (ENDOPLASMIC RETICULUM, ROUGH), while COPII coated vesicles transport forward from the rough endoplasmic reticulum to the Golgi apparatus.
One of the six homologous proteins that specifically bind insulin-like growth factors (SOMATOMEDINS) and modulate their mitogenic and metabolic actions. The function of this protein is not completely defined. However, several studies demonstrate that it inhibits IGF binding to cell surface receptors and thereby inhibits IGF-mediated mitogenic and cell metabolic actions. (Proc Soc Exp Biol Med 1993;204(1):4-29)
Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures.
Extrachromosomal, usually CIRCULAR DNA molecules that are self-replicating and transferable from one organism to another. They are found in a variety of bacterial, archaeal, fungal, algal, and plant species. They are used in GENETIC ENGINEERING as CLONING VECTORS.
A protein that has been shown to function as a calcium-regulated transcription factor as well as a substrate for depolarization-activated CALCIUM-CALMODULIN-DEPENDENT PROTEIN KINASES. This protein functions to integrate both calcium and cAMP signals.
Compounds and molecular complexes that consist of very large numbers of atoms and are generally over 500 kDa in size. In biological systems macromolecular substances usually can be visualized using ELECTRON MICROSCOPY and are distinguished from ORGANELLES by the lack of a membrane structure.
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.
Within a eukaryotic cell, a membrane-limited body which contains chromosomes and one or more nucleoli (CELL NUCLEOLUS). The nuclear membrane consists of a double unit-type membrane which is perforated by a number of pores; the outermost membrane is continuous with the ENDOPLASMIC RETICULUM. A cell may contain more than one nucleus. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
The addition of a tail of polyadenylic acid (POLY A) to the 3' end of mRNA (RNA, MESSENGER). Polyadenylation involves recognizing the processing site signal, (AAUAAA), and cleaving of the mRNA to create a 3' OH terminal end to which poly A polymerase (POLYNUCLEOTIDE ADENYLYLTRANSFERASE) adds 60-200 adenylate residues. The 3' end processing of some messenger RNAs, such as histone mRNA, is carried out by a different process that does not include the addition of poly A as described here.
A serine endopeptidase that is formed from TRYPSINOGEN in the pancreas. It is converted into its active form by ENTEROPEPTIDASE in the small intestine. It catalyzes hydrolysis of the carboxyl group of either arginine or lysine. EC 3.4.21.4.
The species Oryctolagus cuniculus, in the family Leporidae, order LAGOMORPHA. Rabbits are born in burrows, furless, and with eyes and ears closed. In contrast with HARES, rabbits have 22 chromosome pairs.
A calbindin protein found in many mammalian tissues, including the UTERUS, PLACENTA, BONE, PITUITARY GLAND, and KIDNEYS. In intestinal ENTEROCYTES it mediates intracellular calcium transport from apical to basolateral membranes via calcium binding at two EF-HAND MOTIFS. Expression is regulated in some tissues by VITAMIN D.
An important regulator of GENE EXPRESSION during growth and development, and in NEOPLASMS. Tretinoin, also known as retinoic acid and derived from maternal VITAMIN A, is essential for normal GROWTH; and EMBRYONIC DEVELOPMENT. An excess of tretinoin can be teratogenic. It is used in the treatment of PSORIASIS; ACNE VULGARIS; and several other SKIN DISEASES. It has also been approved for use in promyelocytic leukemia (LEUKEMIA, PROMYELOCYTIC, ACUTE).
A member of the p300-CBP transcription factor family that was initially identified as a binding partner for CAMP RESPONSE ELEMENT-BINDING PROTEIN. Mutations in CREB-binding protein are associated with RUBINSTEIN-TAYBI SYNDROME.
Polymers of organic acids and alcohols, with ester linkages--usually polyethylene terephthalate; can be cured into hard plastic, films or tapes, or fibers which can be woven into fabrics, meshes or velours.
A change from planar to elliptic polarization when an initially plane-polarized light wave traverses an optically active medium. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
Technique involving the diffusion of antigen or antibody through a semisolid medium, usually agar or agarose gel, with the result being a precipitin reaction.
A family of ribonucleoproteins that were originally found as proteins bound to nascent RNA transcripts in the form of ribonucleoprotein particles. Although considered ribonucleoproteins they are primarily classified by their protein component. They are involved in a variety of processes such as packaging of RNA and RNA TRANSPORT within the nucleus. A subset of heterogeneous-nuclear ribonucleoproteins are involved in additional functions such as nucleocytoplasmic transport (ACTIVE TRANSPORT, CELL NUCLEUS) of RNA and mRNA stability in the CYTOPLASM.
The level of protein structure in which combinations of secondary protein structures (alpha helices, beta sheets, loop regions, and motifs) pack together to form folded shapes called domains. Disulfide bridges between cysteines in two different parts of the polypeptide chain along with other interactions between the chains play a role in the formation and stabilization of tertiary structure. Small proteins usually consist of only one domain but larger proteins may contain a number of domains connected by segments of polypeptide chain which lack regular secondary structure.
A basic element found in nearly all organized tissues. It is a member of the alkaline earth family of metals with the atomic symbol Ca, atomic number 20, and atomic weight 40. Calcium is the most abundant mineral in the body and combines with phosphorus to form calcium phosphate in the bones and teeth. It is essential for the normal functioning of nerves and muscles and plays a role in blood coagulation (as factor IV) and in many enzymatic processes.
A RNA-binding protein that binds to polypyriminidine rich regions in the INTRONS of messenger RNAs. Polypyrimidine tract-binding protein may be involved in regulating the ALTERNATIVE SPLICING of mRNAs since its presence on an intronic RNA region that is upstream of an EXON inhibits the splicing of the exon into the final mRNA product.
A class of proteins that were originally identified by their ability to bind the DNA sequence CCAAT. The typical CCAAT-enhancer binding protein forms dimers and consists of an activation domain, a DNA-binding basic region, and a leucine-rich dimerization domain (LEUCINE ZIPPERS). CCAAT-BINDING FACTOR is structurally distinct type of CCAAT-enhancer binding protein consisting of a trimer of three different subunits.
The lipid- and protein-containing, selectively permeable membrane that surrounds the cytoplasm in prokaryotic and eukaryotic cells.
An alpha-globulin found in the plasma of man and other vertebrates. It is apparently synthesized in the liver and carries vitamin D and its metabolites through the circulation and mediates the response of tissue. It is also known as group-specific component (Gc). Gc subtypes are used to determine specific phenotypes and gene frequencies. These data are employed in the classification of population groups, paternity investigations, and in forensic medicine.
Reagents with two reactive groups, usually at opposite ends of the molecule, that are capable of reacting with and thereby forming bridges between side chains of amino acids in proteins; the locations of naturally reactive areas within proteins can thereby be identified; may also be used for other macromolecules, like glycoproteins, nucleic acids, or other.
A family of enzymes that catalyze the conversion of ATP and a protein to ADP and a phosphoprotein.
The process by which a DNA molecule is duplicated.
Compounds formed by the joining of smaller, usually repeating, units linked by covalent bonds. These compounds often form large macromolecules (e.g., BIOPOLYMERS; PLASTICS).
Tests that are dependent on the clumping of cells, microorganisms, or particles when mixed with specific antiserum. (From Stedman, 26th ed)
One of the six homologous soluble proteins that bind insulin-like growth factors (SOMATOMEDINS) and modulate their mitogenic and metabolic actions at the cellular level.
Porins are protein molecules that were originally found in the outer membrane of GRAM-NEGATIVE BACTERIA and that form multi-meric channels for the passive DIFFUSION of WATER; IONS; or other small molecules. Porins are present in bacterial CELL WALLS, as well as in plant, fungal, mammalian and other vertebrate CELL MEMBRANES and MITOCHONDRIAL MEMBRANES.
Complexes of RNA-binding proteins with ribonucleic acids (RNA).
A polynucleotide consisting essentially of chains with a repeating backbone of phosphate and ribose units to which nitrogenous bases are attached. RNA is unique among biological macromolecules in that it can encode genetic information, serve as an abundant structural component of cells, and also possesses catalytic activity. (Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed)
One of the six homologous soluble proteins that bind insulin-like growth factors (SOMATOMEDINS) and modulate their mitogenic and metabolic actions at the cellular level.
A stack of flattened vesicles that functions in posttranslational processing and sorting of proteins, receiving them from the rough ENDOPLASMIC RETICULUM and directing them to secretory vesicles, LYSOSOMES, or the CELL MEMBRANE. The movement of proteins takes place by transfer vesicles that bud off from the rough endoplasmic reticulum or Golgi apparatus and fuse with the Golgi, lysosomes or cell membrane. (From Glick, Glossary of Biochemistry and Molecular Biology, 1990)
Polynucleotides are long, multiple-unit chains of nucleotides, the monomers that make up DNA and RNA, which carry genetic information and play crucial roles in various biological processes.
The arrangement of two or more amino acid or base sequences from an organism or organisms in such a way as to align areas of the sequences sharing common properties. The degree of relatedness or homology between the sequences is predicted computationally or statistically based on weights assigned to the elements aligned between the sequences. This in turn can serve as a potential indicator of the genetic relatedness between the organisms.
A sterol regulatory element binding protein that regulates expression of GENES involved in FATTY ACIDS metabolism and LIPOGENESIS. Two major isoforms of the protein exist due to ALTERNATIVE SPLICING.
The spatial arrangement of the atoms of a nucleic acid or polynucleotide that results in its characteristic 3-dimensional shape.
The interaction of two or more substrates or ligands with the same binding site. The displacement of one by the other is used in quantitative and selective affinity measurements.
Substances elaborated by bacteria that have antigenic activity.
An integrin found in FIBROBLASTS; PLATELETS; MONOCYTES, and LYMPHOCYTES. Integrin alpha5beta1 is the classical receptor for FIBRONECTIN, but it also functions as a receptor for LAMININ and several other EXTRACELLULAR MATRIX PROTEINS.
Peptidoglycan is a complex, cross-linked polymer of carbohydrates and peptides that forms the rigid layer of the bacterial cell wall, providing structural support and protection while contributing to the bacterium's susceptibility or resistance to certain antibiotics.
Single-stranded complementary DNA synthesized from an RNA template by the action of RNA-dependent DNA polymerase. cDNA (i.e., complementary DNA, not circular DNA, not C-DNA) is used in a variety of molecular cloning experiments as well as serving as a specific hybridization probe.
An alpha-adrenergic antagonist with long duration of action. It has been used to treat hypertension and as a peripheral vasodilator.
The 7th cranial nerve. The facial nerve has two parts, the larger motor root which may be called the facial nerve proper, and the smaller intermediate or sensory root. Together they provide efferent innervation to the muscles of facial expression and to the lacrimal and SALIVARY GLANDS, and convey afferent information for TASTE from the anterior two-thirds of the TONGUE and for TOUCH from the EXTERNAL EAR.
A well-characterized basic peptide believed to be secreted by the liver and to circulate in the blood. It has growth-regulating, insulin-like, and mitogenic activities. This growth factor has a major, but not absolute, dependence on GROWTH HORMONE. It is believed to be mainly active in adults in contrast to INSULIN-LIKE GROWTH FACTOR II, which is a major fetal growth factor.
A serine endopeptidase secreted by the pancreas as its zymogen, CHYMOTRYPSINOGEN and carried in the pancreatic juice to the duodenum where it is activated by TRYPSIN. It selectively cleaves aromatic amino acids on the carboxyl side.
Connective tissue cells which secrete an extracellular matrix rich in collagen and other macromolecules.
Proteins which maintain the transcriptional quiescence of specific GENES or OPERONS. Classical repressor proteins are DNA-binding proteins that are normally bound to the OPERATOR REGION of an operon, or the ENHANCER SEQUENCES of a gene until a signal occurs that causes their release.
Periplasmic proteins that bind MALTOSE and maltodextrin. They take part in the maltose transport system of BACTERIA.
A biocompatible polymer used as a surgical suture material.
Nucleoside Diphosphate Sugars (NDPs) are biomolecules consisting of a nucleoside monophosphate sugar molecule, which is formed from the condensation of a nucleotide and a sugar molecule through a pyrophosphate bond.
Screening techniques first developed in yeast to identify genes encoding interacting proteins. Variations are used to evaluate interplay between proteins and other molecules. Two-hybrid techniques refer to analysis for protein-protein interactions, one-hybrid for DNA-protein interactions, three-hybrid interactions for RNA-protein interactions or ligand-based interactions. Reverse n-hybrid techniques refer to analysis for mutations or other small molecules that dissociate known interactions.
Sites on an antigen that interact with specific antibodies.
Factors that are involved in directing the cleavage and POLYADENYLATION of the of MESSENGER RNA near the site of the RNA 3' POLYADENYLATION SIGNALS.
Pinched-off nerve endings and their contents of vesicles and cytoplasm together with the attached subsynaptic area of the membrane of the post-synaptic cell. They are largely artificial structures produced by fractionation after selective centrifugation of nervous tissue homogenates.
The phenotypic manifestation of a gene or genes by the processes of GENETIC TRANSCRIPTION and GENETIC TRANSLATION.
The resection or removal of the nerve to an organ or part. (Dorland, 28th ed)
The part of CENTRAL NERVOUS SYSTEM that is contained within the skull (CRANIUM). Arising from the NEURAL TUBE, the embryonic brain is comprised of three major parts including PROSENCEPHALON (the forebrain); MESENCEPHALON (the midbrain); and RHOMBENCEPHALON (the hindbrain). The developed brain consists of CEREBRUM; CEREBELLUM; and other structures in the BRAIN STEM.
The extent to which an RNA molecule retains its structural integrity and resists degradation by RNASE, and base-catalyzed HYDROLYSIS, under changing in vivo or in vitro conditions.
A chromatographic technique that utilizes the ability of biological molecules to bind to certain ligands specifically and reversibly. It is used in protein biochemistry. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
Ganglia of the sympathetic nervous system including the paravertebral and the prevertebral ganglia. Among these are the sympathetic chain ganglia, the superior, middle, and inferior cervical ganglia, and the aorticorenal, celiac, and stellate ganglia.
A single chain of deoxyribonucleotides that occurs in some bacteria and viruses. It usually exists as a covalently closed circle.
Lipid-containing polysaccharides which are endotoxins and important group-specific antigens. They are often derived from the cell wall of gram-negative bacteria and induce immunoglobulin secretion. The lipopolysaccharide molecule consists of three parts: LIPID A, core polysaccharide, and O-specific chains (O ANTIGENS). When derived from Escherichia coli, lipopolysaccharides serve as polyclonal B-cell mitogens commonly used in laboratory immunology. (From Dorland, 28th ed)
The process of moving proteins from one cellular compartment (including extracellular) to another by various sorting and transport mechanisms such as gated transport, protein translocation, and vesicular transport.

Retinoic acid receptors (RARs) are a type of nuclear receptor proteins that play crucial roles in the regulation of gene transcription. They are activated by retinoic acid, which is a metabolite of vitamin A. There are three subtypes of RARs, namely RARα, RARβ, and RARγ, each encoded by different genes.

Once retinoic acid binds to RARs, they form heterodimers with another type of nuclear receptor called retinoid X receptors (RXRs). The RAR-RXR complex then binds to specific DNA sequences called retinoic acid response elements (RAREs) in the promoter regions of target genes. This binding event leads to the recruitment of coactivator proteins and the modification of chromatin structure, ultimately resulting in the activation or repression of gene transcription.

Retinoic acid and its receptors play essential roles in various biological processes, including embryonic development, cell differentiation, apoptosis, and immune function. In addition, RARs have been implicated in several diseases, such as cancer, where they can act as tumor suppressors or oncogenes depending on the context. Therefore, understanding the mechanisms of RAR signaling has important implications for the development of novel therapeutic strategies for various diseases.

"Poly A" is an abbreviation for "poly(A) tail" or "polyadenylation." It refers to the addition of multiple adenine (A) nucleotides to the 3' end of eukaryotic mRNA molecules during the process of transcription. This poly(A) tail plays a crucial role in various aspects of mRNA metabolism, including stability, transport, and translation. The length of the poly(A) tail can vary from around 50 to 250 nucleotides depending on the cell type and developmental stage.

I'm sorry for any confusion, but "Poly C" is not a widely recognized medical term or abbreviation in the field of medicine or biology. It might be a typographical error or a shorthand notation used in a specific context. If you could provide more context or clarify what you mean by "Poly C," I would be happy to help further.

Synapsins are a family of proteins found in the presynaptic terminals of neurons. They play a crucial role in the regulation of neurotransmitter release and synaptic plasticity, which is the ability of synapses to strengthen or weaken over time in response to increases or decreases in their activity.

Synapsins are associated with the cytoskeleton of presynaptic terminals and help to tether vesicles containing neurotransmitters to the cytoskeleton. This allows for the rapid mobilization of vesicles to the active zone of the synapse, where they can be released in response to an action potential.

Synapsins are also involved in the regulation of vesicle pool size and the clustering of calcium channels at the active zone. They have been implicated in various neurological disorders, including epilepsy, fragile X syndrome, and Alzheimer's disease.

I'm sorry for any confusion, but "Poly U" is not a recognized medical term or abbreviation in the English language. It could potentially refer to Polytechnic University or Hong Kong Polytechnic University, but it does not have a specific medical connotation. If you have more context or information, I'd be happy to help further!

Poly(I):C is a synthetic double-stranded RNA (dsRNA) molecule made up of polycytidylic acid (poly C) and polyinosinic acid (poly I), joined by a 1:1 ratio of their phosphodiester linkages. It is used in research as an immunostimulant, particularly to induce the production of interferons and other cytokines, and to activate immune cells such as natural killer (NK) cells, dendritic cells, and macrophages. Poly(I):C has been studied for its potential use in cancer immunotherapy and as a vaccine adjuvant. It can also induce innate antiviral responses and has been explored as an antiviral agent itself.

Carrier proteins, also known as transport proteins, are a type of protein that facilitates the movement of molecules across cell membranes. They are responsible for the selective and active transport of ions, sugars, amino acids, and other molecules from one side of the membrane to the other, against their concentration gradient. This process requires energy, usually in the form of ATP (adenosine triphosphate).

Carrier proteins have a specific binding site for the molecule they transport, and undergo conformational changes upon binding, which allows them to move the molecule across the membrane. Once the molecule has been transported, the carrier protein returns to its original conformation, ready to bind and transport another molecule.

Carrier proteins play a crucial role in maintaining the balance of ions and other molecules inside and outside of cells, and are essential for many physiological processes, including nerve impulse transmission, muscle contraction, and nutrient uptake.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

Neisseria gonorrhoeae is a species of gram-negative, aerobic diplococcus that is the etiologic agent of gonorrhea, a sexually transmitted infection. It is commonly found in the mucous membranes of the reproductive tract, including the cervix, urethra, and rectum, as well as the throat and eyes. The bacterium can cause a range of symptoms, including discharge, burning during urination, and, in women, abnormal menstrual bleeding. If left untreated, it can lead to more serious complications, such as pelvic inflammatory disease and infertility. It is important to note that N. gonorrhoeae has developed resistance to many antibiotics over time, making treatment more challenging. A culture or nucleic acid amplification test (NAAT) is used for the diagnosis of this infection.

An amino acid sequence is the specific order of amino acids in a protein or peptide molecule, formed by the linking of the amino group (-NH2) of one amino acid to the carboxyl group (-COOH) of another amino acid through a peptide bond. The sequence is determined by the genetic code and is unique to each type of protein or peptide. It plays a crucial role in determining the three-dimensional structure and function of proteins.

High Mobility Group AT-Hook 1 (HMGA1) is a non-histone chromosomal protein that belongs to the HMGA family. The HMGA proteins are characterized by their ability to bind to AT-rich regions in the minor groove of DNA and modulate the chromatin structure, thereby regulating gene transcription.

The HMGA1 protein exists in two isoforms, HMGA1a and HMGA1b, which differ in their amino acid sequences due to alternative splicing of the HMGA1 pre-mRNA. The HMGA1a isoform has 108 amino acids, while HMGA1b has 109 amino acids.

HMGA1 proteins play crucial roles in various cellular processes, including proliferation, differentiation, and apoptosis. Dysregulation of HMGA1 expression has been implicated in several human diseases, such as cancer, where it functions as a transcriptional regulator of genes involved in tumorigenesis.

"Poly dA-dT" is not a medical term, but rather a molecular biology term that refers to a synthetic double-stranded DNA molecule. It is composed of two complementary strands: one strand consists of repeated adenine (dA) nucleotides, while the other strand consists of repeated thymine (dT) nucleotides. The "poly" prefix indicates that multiple units of these nucleotides are linked together in a chain-like structure.

This type of synthetic DNA molecule is often used as a substrate for various molecular biology techniques, such as in vitro transcription or translation assays, where it serves as a template for the production of RNA or proteins. It can also be used to study the interactions between DNA and proteins, such as transcription factors, that bind specifically to certain nucleotide sequences.

"Poly A-U" is not a standard medical term. However, in biochemistry and genetics, "poly A" and "poly U" refer to repeating sequences of adenine (A) or uracil (U) nucleotides in DNA or RNA molecules, respectively.

"Poly A" is a post-transcriptional modification that occurs in mRNA, where multiple adenine nucleotides are added to the 3' end of the transcript. This process is important for the stability and translation of mRNA in eukaryotic cells.

"Poly U," on the other hand, can be found in some RNA molecules such as in the 3' untranslated region (UTR) of certain mRNAs or in specific types of non-coding RNAs like U-rich small nuclear RNAs (snRNAs).

Therefore, "Poly A-U" may refer to alternating sequences of adenine and uracil nucleotides in a DNA or RNA molecule. However, it is essential to consider the context in which this term is used to provide an accurate interpretation.

Poly(ADP-ribose) (PAR) is not strictly referred to as "Poly Adenosine Diphosphate Ribose" in the medical or biochemical context, although the term ADP-ribose is a component of it. Poly(ADP-ribose) is a polymer of ADP-ribose units that are synthesized by enzymes called poly(ADP-ribose) polymerases (PARPs).

Poly(ADP-ribosyl)ation, the process of adding PAR polymers to target proteins, plays a crucial role in various cellular processes such as DNA repair, genomic stability, and cell death. In medical research, alterations in PAR metabolism have been implicated in several diseases, including cancer and neurodegenerative disorders. Therefore, understanding the function and regulation of poly(ADP-ribose) is of significant interest in biomedical sciences.

I'm sorry for any confusion, but "Poly G" does not have a specific medical definition. The term "poly" is a prefix in medicine that means many or multiple, and "G" could potentially refer to a variety of things (such as a genetic locus or a grade), but without more context it's impossible to provide an accurate medical definition for this term.

If you have a specific medical question or concern, I would be happy to try to help you with that. Please provide some additional context or clarify what you mean by "Poly G."

I'm sorry for any confusion, but "Poly I" is not a recognized medical term or abbreviation in the context of human diseases or conditions. It's possible that there might be a typo or misunderstanding in your query. If you intended to ask about a specific medical condition, medication, or concept, please provide the full and correct term so I can give you an accurate and helpful response.

Protein binding, in the context of medical and biological sciences, refers to the interaction between a protein and another molecule (known as the ligand) that results in a stable complex. This process is often reversible and can be influenced by various factors such as pH, temperature, and concentration of the involved molecules.

In clinical chemistry, protein binding is particularly important when it comes to drugs, as many of them bind to proteins (especially albumin) in the bloodstream. The degree of protein binding can affect a drug's distribution, metabolism, and excretion, which in turn influence its therapeutic effectiveness and potential side effects.

Protein-bound drugs may be less available for interaction with their target tissues, as only the unbound or "free" fraction of the drug is active. Therefore, understanding protein binding can help optimize dosing regimens and minimize adverse reactions.

A base sequence in the context of molecular biology refers to the specific order of nucleotides in a DNA or RNA molecule. In DNA, these nucleotides are adenine (A), guanine (G), cytosine (C), and thymine (T). In RNA, uracil (U) takes the place of thymine. The base sequence contains genetic information that is transcribed into RNA and ultimately translated into proteins. It is the exact order of these bases that determines the genetic code and thus the function of the DNA or RNA molecule.

Coat Protein Complex I (CPCI or COPI) is a protein complex involved in the intracellular transport of proteins within eukaryotic cells. It functions primarily in the retrograde transport of proteins from the Golgi apparatus to the endoplasmic reticulum (ER). The complex is composed of seven subunits, known as alpha, beta, gamma, delta, epsilon, zeta, and eta COPs (coat proteins), which form a cage-like structure around transport vesicles. This coat assists in the selection of cargo proteins, vesicle budding, and subsequent fusion with target membranes during the recycling of ER-derived proteins.

Tacrolimus binding proteins, also known as FK506 binding proteins (FKBPs), are a group of intracellular proteins that bind to the immunosuppressive drug tacrolimus (also known as FK506) and play a crucial role in its mechanism of action. Tacrolimus is primarily used in organ transplantation to prevent rejection of the transplanted organ.

FKBPs are a family of peptidyl-prolyl cis-trans isomerases (PPIases) that catalyze the conversion of proline residues from their cis to trans conformations in proteins, thereby regulating protein folding and function. FKBP12, a member of this family, has a high affinity for tacrolimus and forms a complex with it upon entry into the cell.

The formation of the tacrolimus-FKBP12 complex inhibits calcineurin, a serine/threonine phosphatase that plays a critical role in T-cell activation. Calcineurin inhibition prevents the dephosphorylation and nuclear translocation of the transcription factor NFAT (nuclear factor of activated T-cells), thereby blocking the expression of genes involved in T-cell activation, proliferation, and cytokine production.

In summary, tacrolimus binding proteins are intracellular proteins that bind to tacrolimus and inhibit calcineurin, leading to the suppression of T-cell activation and immune response, which is essential in organ transplantation and other immunological disorders.

DNA-binding proteins are a type of protein that have the ability to bind to DNA (deoxyribonucleic acid), the genetic material of organisms. These proteins play crucial roles in various biological processes, such as regulation of gene expression, DNA replication, repair and recombination.

The binding of DNA-binding proteins to specific DNA sequences is mediated by non-covalent interactions, including electrostatic, hydrogen bonding, and van der Waals forces. The specificity of binding is determined by the recognition of particular nucleotide sequences or structural features of the DNA molecule.

DNA-binding proteins can be classified into several categories based on their structure and function, such as transcription factors, histones, and restriction enzymes. Transcription factors are a major class of DNA-binding proteins that regulate gene expression by binding to specific DNA sequences in the promoter region of genes and recruiting other proteins to modulate transcription. Histones are DNA-binding proteins that package DNA into nucleosomes, the basic unit of chromatin structure. Restriction enzymes are DNA-binding proteins that recognize and cleave specific DNA sequences, and are widely used in molecular biology research and biotechnology applications.

Molecular weight, also known as molecular mass, is the mass of a molecule. It is expressed in units of atomic mass units (amu) or daltons (Da). Molecular weight is calculated by adding up the atomic weights of each atom in a molecule. It is a useful property in chemistry and biology, as it can be used to determine the concentration of a substance in a solution, or to calculate the amount of a substance that will react with another in a chemical reaction.

Messenger RNA (mRNA) is a type of RNA (ribonucleic acid) that carries genetic information copied from DNA in the form of a series of three-base code "words," each of which specifies a particular amino acid. This information is used by the cell's machinery to construct proteins, a process known as translation. After being transcribed from DNA, mRNA travels out of the nucleus to the ribosomes in the cytoplasm where protein synthesis occurs. Once the protein has been synthesized, the mRNA may be degraded and recycled. Post-transcriptional modifications can also occur to mRNA, such as alternative splicing and addition of a 5' cap and a poly(A) tail, which can affect its stability, localization, and translation efficiency.

I'm sorry for any confusion, but "Poly T" is not a standard medical term that I am aware of. It is possible that it could be an abbreviation or shorthand used in a specific context, such as a medical report or research study. If you have more information about where this term came from or how it is being used, I may be able to provide a more accurate and helpful response.

However, if "Poly T" is meant to refer to polycythemia vera, which is a type of blood cancer characterized by an overproduction of red blood cells, then here's the definition:

Polycythemia Vera (PV) is a myeloproliferative neoplasm (MPN), a type of blood cancer that affects the bone marrow. In PV, the body produces too many red blood cells, white blood cells, and platelets, leading to an increased risk of blood clots, enlargement of the spleen, and other complications. The exact cause of PV is not known, but it is thought to be related to genetic mutations that affect the regulation of cell growth and division in the bone marrow. Symptoms of PV can include fatigue, headache, dizziness, shortness of breath, and a bluish or reddish tint to the skin. Treatment for PV typically involves medications to reduce the production of blood cells, as well as regular monitoring to manage complications and prevent progression of the disease.

Retinol-binding proteins (RBPs) are a group of proteins found in the body that play a crucial role in transporting and delivering retinol (vitamin A alcohol) to various tissues and cells. RBPs are synthesized primarily in the liver and then secreted into the bloodstream, where they bind to retinol and form a complex called holo-RBP.

Cellular RBPs, also known as intracellular RBPs or CRBPs (cellular retinol-binding proteins), are a subclass of RBPs that function inside cells. They are responsible for transporting retinol within the cell and facilitating its conversion to retinal and then to retinoic acid, which are active forms of vitamin A involved in various physiological processes such as vision, immune function, and embryonic development.

CRBPs have a high affinity for retinol and help regulate its intracellular concentration by preventing its degradation and promoting its uptake into the cell. There are several isoforms of CRBPs, including CRBP-I, CRBP-II, CRBP-III, and CRBP-IV, each with distinct expression patterns and functions in different tissues and cells.

Overall, CRBPs play a critical role in maintaining the homeostasis of vitamin A metabolism and ensuring its proper utilization in various physiological processes.

Bacterial proteins are a type of protein that are produced by bacteria as part of their structural or functional components. These proteins can be involved in various cellular processes, such as metabolism, DNA replication, transcription, and translation. They can also play a role in bacterial pathogenesis, helping the bacteria to evade the host's immune system, acquire nutrients, and multiply within the host.

Bacterial proteins can be classified into different categories based on their function, such as:

1. Enzymes: Proteins that catalyze chemical reactions in the bacterial cell.
2. Structural proteins: Proteins that provide structural support and maintain the shape of the bacterial cell.
3. Signaling proteins: Proteins that help bacteria to communicate with each other and coordinate their behavior.
4. Transport proteins: Proteins that facilitate the movement of molecules across the bacterial cell membrane.
5. Toxins: Proteins that are produced by pathogenic bacteria to damage host cells and promote infection.
6. Surface proteins: Proteins that are located on the surface of the bacterial cell and interact with the environment or host cells.

Understanding the structure and function of bacterial proteins is important for developing new antibiotics, vaccines, and other therapeutic strategies to combat bacterial infections.

RNA-binding proteins (RBPs) are a class of proteins that selectively interact with RNA molecules to form ribonucleoprotein complexes. These proteins play crucial roles in the post-transcriptional regulation of gene expression, including pre-mRNA processing, mRNA stability, transport, localization, and translation. RBPs recognize specific RNA sequences or structures through their modular RNA-binding domains, which can be highly degenerate and allow for the recognition of a wide range of RNA targets. The interaction between RBPs and RNA is often dynamic and can be regulated by various post-translational modifications of the proteins or by environmental stimuli, allowing for fine-tuning of gene expression in response to changing cellular needs. Dysregulation of RBP function has been implicated in various human diseases, including neurological disorders and cancer.

In the context of medical and biological sciences, a "binding site" refers to a specific location on a protein, molecule, or cell where another molecule can attach or bind. This binding interaction can lead to various functional changes in the original protein or molecule. The other molecule that binds to the binding site is often referred to as a ligand, which can be a small molecule, ion, or even another protein.

The binding between a ligand and its target binding site can be specific and selective, meaning that only certain ligands can bind to particular binding sites with high affinity. This specificity plays a crucial role in various biological processes, such as signal transduction, enzyme catalysis, or drug action.

In the case of drug development, understanding the location and properties of binding sites on target proteins is essential for designing drugs that can selectively bind to these sites and modulate protein function. This knowledge can help create more effective and safer therapeutic options for various diseases.

Insulin-like growth factor binding proteins (IGFBPs) are a family of proteins that bind to and regulate the biological activity of insulin-like growth factors (IGFs), specifically IGF-1 and IGF-2. There are six distinct IGFBPs (IGFBP-1 to IGFBP-6) in humans, each with unique structural features, expression patterns, and functions.

The primary function of IGFBPs is to modulate the interaction between IGFs and their cell surface receptors, thereby controlling IGF-mediated intracellular signaling pathways involved in cell growth, differentiation, and survival. IGFBPs can either enhance or inhibit IGF actions depending on the specific context, such as cell type, subcellular localization, and presence of other binding partners.

In addition to their role in IGF regulation, some IGFBPs have IGF-independent functions, including direct interaction with cell surface receptors, modulation of extracellular matrix composition, and participation in cell migration and apoptosis. Dysregulation of IGFBP expression and function has been implicated in various pathological conditions, such as cancer, diabetes, and cardiovascular diseases.

Calcium-binding proteins (CaBPs) are a diverse group of proteins that have the ability to bind calcium ions (Ca^2+^) with high affinity and specificity. They play crucial roles in various cellular processes, including signal transduction, muscle contraction, neurotransmitter release, and protection against oxidative stress.

The binding of calcium ions to these proteins induces conformational changes that can either activate or inhibit their functions. Some well-known CaBPs include calmodulin, troponin C, S100 proteins, and parvalbumins. These proteins are essential for maintaining calcium homeostasis within cells and for mediating the effects of calcium as a second messenger in various cellular signaling pathways.

Retinol-binding proteins (RBPs) are specialized transport proteins that bind and carry retinol (vitamin A alcohol) in the bloodstream. The most well-known and studied RBP is serum retinol-binding protein 4 (RBP4), which is primarily produced in the liver and circulates in the bloodstream.

RBP4 plays a crucial role in delivering retinol to target tissues, where it gets converted into active forms of vitamin A, such as retinal and retinoic acid, which are essential for various physiological functions, including vision, immune response, cell growth, and differentiation. RBP4 binds to retinol in a 1:1 molar ratio, forming a complex that is stable and soluble in the bloodstream.

Additionally, RBP4 has been identified as an adipokine, a protein hormone produced by adipose tissue, and has been associated with insulin resistance, metabolic syndrome, and type 2 diabetes. However, the precise mechanisms through which RBP4 contributes to these conditions are not yet fully understood.

Nerve tissue proteins are specialized proteins found in the nervous system that provide structural and functional support to nerve cells, also known as neurons. These proteins include:

1. Neurofilaments: These are type IV intermediate filaments that provide structural support to neurons and help maintain their shape and size. They are composed of three subunits - NFL (light), NFM (medium), and NFH (heavy).

2. Neuronal Cytoskeletal Proteins: These include tubulins, actins, and spectrins that provide structural support to the neuronal cytoskeleton and help maintain its integrity.

3. Neurotransmitter Receptors: These are specialized proteins located on the postsynaptic membrane of neurons that bind neurotransmitters released by presynaptic neurons, triggering a response in the target cell.

4. Ion Channels: These are transmembrane proteins that regulate the flow of ions across the neuronal membrane and play a crucial role in generating and transmitting electrical signals in neurons.

5. Signaling Proteins: These include enzymes, receptors, and adaptor proteins that mediate intracellular signaling pathways involved in neuronal development, differentiation, survival, and death.

6. Adhesion Proteins: These are cell surface proteins that mediate cell-cell and cell-matrix interactions, playing a crucial role in the formation and maintenance of neural circuits.

7. Extracellular Matrix Proteins: These include proteoglycans, laminins, and collagens that provide structural support to nerve tissue and regulate neuronal migration, differentiation, and survival.

'Escherichia coli' (E. coli) is a type of gram-negative, facultatively anaerobic, rod-shaped bacterium that commonly inhabits the intestinal tract of humans and warm-blooded animals. It is a member of the family Enterobacteriaceae and one of the most well-studied prokaryotic model organisms in molecular biology.

While most E. coli strains are harmless and even beneficial to their hosts, some serotypes can cause various forms of gastrointestinal and extraintestinal illnesses in humans and animals. These pathogenic strains possess virulence factors that enable them to colonize and damage host tissues, leading to diseases such as diarrhea, urinary tract infections, pneumonia, and sepsis.

E. coli is a versatile organism with remarkable genetic diversity, which allows it to adapt to various environmental niches. It can be found in water, soil, food, and various man-made environments, making it an essential indicator of fecal contamination and a common cause of foodborne illnesses. The study of E. coli has contributed significantly to our understanding of fundamental biological processes, including DNA replication, gene regulation, and protein synthesis.

I'm sorry for any confusion, but "Polydeoxyribonucleotides" is not a widely recognized or established medical term. It seems to be a made-up or very obscure term that combines "poly," meaning many, "deoxy," referring to the lack of a hydroxyl group at the 2' carbon position in the ribose sugar, and "ribonucleotides," which are the building blocks of RNA.

If you meant "Polydeoxynucleotides" instead, it would refer to long, synthetic chains of deoxynucleotides, which are the building blocks of DNA. These chains can be used in various biochemical and biological research applications, such as studying enzyme mechanisms or constructing genetic circuits.

Electrophoresis, polyacrylamide gel (EPG) is a laboratory technique used to separate and analyze complex mixtures of proteins or nucleic acids (DNA or RNA) based on their size and electrical charge. This technique utilizes a matrix made of cross-linked polyacrylamide, a type of gel, which provides a stable and uniform environment for the separation of molecules.

In this process:

1. The polyacrylamide gel is prepared by mixing acrylamide monomers with a cross-linking agent (bis-acrylamide) and a catalyst (ammonium persulfate) in the presence of a buffer solution.
2. The gel is then poured into a mold and allowed to polymerize, forming a solid matrix with uniform pore sizes that depend on the concentration of acrylamide used. Higher concentrations result in smaller pores, providing better resolution for separating smaller molecules.
3. Once the gel has set, it is placed in an electrophoresis apparatus containing a buffer solution. Samples containing the mixture of proteins or nucleic acids are loaded into wells on the top of the gel.
4. An electric field is applied across the gel, causing the negatively charged molecules to migrate towards the positive electrode (anode) while positively charged molecules move toward the negative electrode (cathode). The rate of migration depends on the size, charge, and shape of the molecules.
5. Smaller molecules move faster through the gel matrix and will migrate farther from the origin compared to larger molecules, resulting in separation based on size. Proteins and nucleic acids can be selectively stained after electrophoresis to visualize the separated bands.

EPG is widely used in various research fields, including molecular biology, genetics, proteomics, and forensic science, for applications such as protein characterization, DNA fragment analysis, cloning, mutation detection, and quality control of nucleic acid or protein samples.

A cell line is a culture of cells that are grown in a laboratory for use in research. These cells are usually taken from a single cell or group of cells, and they are able to divide and grow continuously in the lab. Cell lines can come from many different sources, including animals, plants, and humans. They are often used in scientific research to study cellular processes, disease mechanisms, and to test new drugs or treatments. Some common types of human cell lines include HeLa cells (which come from a cancer patient named Henrietta Lacks), HEK293 cells (which come from embryonic kidney cells), and HUVEC cells (which come from umbilical vein endothelial cells). It is important to note that cell lines are not the same as primary cells, which are cells that are taken directly from a living organism and have not been grown in the lab.

In the context of medicine and pharmacology, "kinetics" refers to the study of how a drug moves throughout the body, including its absorption, distribution, metabolism, and excretion (often abbreviated as ADME). This field is called "pharmacokinetics."

1. Absorption: This is the process of a drug moving from its site of administration into the bloodstream. Factors such as the route of administration (e.g., oral, intravenous, etc.), formulation, and individual physiological differences can affect absorption.

2. Distribution: Once a drug is in the bloodstream, it gets distributed throughout the body to various tissues and organs. This process is influenced by factors like blood flow, protein binding, and lipid solubility of the drug.

3. Metabolism: Drugs are often chemically modified in the body, typically in the liver, through processes known as metabolism. These changes can lead to the formation of active or inactive metabolites, which may then be further distributed, excreted, or undergo additional metabolic transformations.

4. Excretion: This is the process by which drugs and their metabolites are eliminated from the body, primarily through the kidneys (urine) and the liver (bile).

Understanding the kinetics of a drug is crucial for determining its optimal dosing regimen, potential interactions with other medications or foods, and any necessary adjustments for special populations like pediatric or geriatric patients, or those with impaired renal or hepatic function.

Membrane proteins are a type of protein that are embedded in the lipid bilayer of biological membranes, such as the plasma membrane of cells or the inner membrane of mitochondria. These proteins play crucial roles in various cellular processes, including:

1. Cell-cell recognition and signaling
2. Transport of molecules across the membrane (selective permeability)
3. Enzymatic reactions at the membrane surface
4. Energy transduction and conversion
5. Mechanosensation and signal transduction

Membrane proteins can be classified into two main categories: integral membrane proteins, which are permanently associated with the lipid bilayer, and peripheral membrane proteins, which are temporarily or loosely attached to the membrane surface. Integral membrane proteins can further be divided into three subcategories based on their topology:

1. Transmembrane proteins, which span the entire width of the lipid bilayer with one or more alpha-helices or beta-barrels.
2. Lipid-anchored proteins, which are covalently attached to lipids in the membrane via a glycosylphosphatidylinositol (GPI) anchor or other lipid modifications.
3. Monotopic proteins, which are partially embedded in the membrane and have one or more domains exposed to either side of the bilayer.

Membrane proteins are essential for maintaining cellular homeostasis and are targets for various therapeutic interventions, including drug development and gene therapy. However, their structural complexity and hydrophobicity make them challenging to study using traditional biochemical methods, requiring specialized techniques such as X-ray crystallography, nuclear magnetic resonance (NMR) spectroscopy, and single-particle cryo-electron microscopy (cryo-EM).

Molecular cloning is a laboratory technique used to create multiple copies of a specific DNA sequence. This process involves several steps:

1. Isolation: The first step in molecular cloning is to isolate the DNA sequence of interest from the rest of the genomic DNA. This can be done using various methods such as PCR (polymerase chain reaction), restriction enzymes, or hybridization.
2. Vector construction: Once the DNA sequence of interest has been isolated, it must be inserted into a vector, which is a small circular DNA molecule that can replicate independently in a host cell. Common vectors used in molecular cloning include plasmids and phages.
3. Transformation: The constructed vector is then introduced into a host cell, usually a bacterial or yeast cell, through a process called transformation. This can be done using various methods such as electroporation or chemical transformation.
4. Selection: After transformation, the host cells are grown in selective media that allow only those cells containing the vector to grow. This ensures that the DNA sequence of interest has been successfully cloned into the vector.
5. Amplification: Once the host cells have been selected, they can be grown in large quantities to amplify the number of copies of the cloned DNA sequence.

Molecular cloning is a powerful tool in molecular biology and has numerous applications, including the production of recombinant proteins, gene therapy, functional analysis of genes, and genetic engineering.

Fatty acid-binding proteins (FABPs) are a group of small intracellular proteins that play a crucial role in the transport and metabolism of fatty acids within cells. They are responsible for binding long-chain fatty acids, which are hydrophobic molecules, and facilitating their movement across the cell while protecting the cells from lipotoxicity.

FABPs are expressed in various tissues, including the heart, liver, muscle, and brain, with different isoforms found in specific organs. These proteins have a high affinity for long-chain fatty acids and can regulate their intracellular concentration by controlling the uptake, storage, and metabolism of these molecules.

FABPs also play a role in modulating cell signaling pathways that are involved in various physiological processes such as inflammation, differentiation, and apoptosis. Dysregulation of FABP expression and function has been implicated in several diseases, including diabetes, obesity, cancer, and neurodegenerative disorders.

In summary, fatty acid-binding proteins are essential intracellular proteins that facilitate the transport and metabolism of long-chain fatty acids while regulating cell signaling pathways.

High mobility group proteins (HMG proteins) are a family of nuclear proteins that are characterized by their ability to bind to DNA and influence its structure and function. They are named "high mobility" because of their rapid movement in gel electrophoresis. HMG proteins are involved in various nuclear processes, including chromatin remodeling, transcription regulation, and DNA repair.

There are three main classes of HMG proteins: HMGA, HMGB, and HMGN. Each class has distinct structural features and functions. For example, HMGA proteins have a unique "AT-hook" domain that allows them to bind to the minor groove of AT-rich DNA sequences, while HMGB proteins have two "HMG-box" domains that enable them to bend and unwind DNA.

HMG proteins play important roles in many physiological and pathological processes, such as embryonic development, inflammation, and cancer. Dysregulation of HMG protein function has been implicated in various diseases, including neurodegenerative disorders, diabetes, and cancer. Therefore, understanding the structure, function, and regulation of HMG proteins is crucial for developing new therapeutic strategies for these diseases.

Bacterial outer membrane proteins (OMPs) are a type of protein found in the outer membrane of gram-negative bacteria. The outer membrane is a unique characteristic of gram-negative bacteria, and it serves as a barrier that helps protect the bacterium from hostile environments. OMPs play a crucial role in maintaining the structural integrity and selective permeability of the outer membrane. They are involved in various functions such as nutrient uptake, transport, adhesion, and virulence factor secretion.

OMPs are typically composed of beta-barrel structures that span the bacterial outer membrane. These proteins can be classified into several groups based on their size, function, and structure. Some of the well-known OMP families include porins, autotransporters, and two-partner secretion systems.

Porins are the most abundant type of OMPs and form water-filled channels that allow the passive diffusion of small molecules, ions, and nutrients across the outer membrane. Autotransporters are a diverse group of OMPs that play a role in bacterial pathogenesis by secreting virulence factors or acting as adhesins. Two-partner secretion systems involve the cooperation between two proteins to transport effector molecules across the outer membrane.

Understanding the structure and function of bacterial OMPs is essential for developing new antibiotics and therapies that target gram-negative bacteria, which are often resistant to conventional treatments.

Transcription factors are proteins that play a crucial role in regulating gene expression by controlling the transcription of DNA to messenger RNA (mRNA). They function by binding to specific DNA sequences, known as response elements, located in the promoter region or enhancer regions of target genes. This binding can either activate or repress the initiation of transcription, depending on the properties and interactions of the particular transcription factor. Transcription factors often act as part of a complex network of regulatory proteins that determine the precise spatiotemporal patterns of gene expression during development, differentiation, and homeostasis in an organism.

Deoxyribonucleic acid (DNA) is the genetic material present in the cells of organisms where it is responsible for the storage and transmission of hereditary information. DNA is a long molecule that consists of two strands coiled together to form a double helix. Each strand is made up of a series of four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - that are linked together by phosphate and sugar groups. The sequence of these bases along the length of the molecule encodes genetic information, with A always pairing with T and C always pairing with G. This base-pairing allows for the replication and transcription of DNA, which are essential processes in the functioning and reproduction of all living organisms.

Genetic transcription is the process by which the information in a strand of DNA is used to create a complementary RNA molecule. This process is the first step in gene expression, where the genetic code in DNA is converted into a form that can be used to produce proteins or functional RNAs.

During transcription, an enzyme called RNA polymerase binds to the DNA template strand and reads the sequence of nucleotide bases. As it moves along the template, it adds complementary RNA nucleotides to the growing RNA chain, creating a single-stranded RNA molecule that is complementary to the DNA template strand. Once transcription is complete, the RNA molecule may undergo further processing before it can be translated into protein or perform its functional role in the cell.

Transcription can be either "constitutive" or "regulated." Constitutive transcription occurs at a relatively constant rate and produces essential proteins that are required for basic cellular functions. Regulated transcription, on the other hand, is subject to control by various intracellular and extracellular signals, allowing cells to respond to changing environmental conditions or developmental cues.

Promoter regions in genetics refer to specific DNA sequences located near the transcription start site of a gene. They serve as binding sites for RNA polymerase and various transcription factors that regulate the initiation of gene transcription. These regulatory elements help control the rate of transcription and, therefore, the level of gene expression. Promoter regions can be composed of different types of sequences, such as the TATA box and CAAT box, and their organization and composition can vary between different genes and species.

Recombinant proteins are artificially created proteins produced through the use of recombinant DNA technology. This process involves combining DNA molecules from different sources to create a new set of genes that encode for a specific protein. The resulting recombinant protein can then be expressed, purified, and used for various applications in research, medicine, and industry.

Recombinant proteins are widely used in biomedical research to study protein function, structure, and interactions. They are also used in the development of diagnostic tests, vaccines, and therapeutic drugs. For example, recombinant insulin is a common treatment for diabetes, while recombinant human growth hormone is used to treat growth disorders.

The production of recombinant proteins typically involves the use of host cells, such as bacteria, yeast, or mammalian cells, which are engineered to express the desired protein. The host cells are transformed with a plasmid vector containing the gene of interest, along with regulatory elements that control its expression. Once the host cells are cultured and the protein is expressed, it can be purified using various chromatography techniques.

Overall, recombinant proteins have revolutionized many areas of biology and medicine, enabling researchers to study and manipulate proteins in ways that were previously impossible.

'Gene expression regulation' refers to the processes that control whether, when, and where a particular gene is expressed, meaning the production of a specific protein or functional RNA encoded by that gene. This complex mechanism can be influenced by various factors such as transcription factors, chromatin remodeling, DNA methylation, non-coding RNAs, and post-transcriptional modifications, among others. Proper regulation of gene expression is crucial for normal cellular function, development, and maintaining homeostasis in living organisms. Dysregulation of gene expression can lead to various diseases, including cancer and genetic disorders.

Polynucleotide adenylyltransferase is not a medical term per se, but rather a biological term used to describe an enzyme that catalyzes the addition of adenine residues to the 3'-hydroxyl end of polynucleotides. In other words, these enzymes transfer AMP (adenosine monophosphate) molecules to the ends of DNA or RNA strands, creating a chain of adenine nucleotides.

One of the most well-known examples of this class of enzyme is terminal transferase, which is often used in research settings for various molecular biology techniques such as adding homopolymeric tails to DNA molecules. It's worth noting that while these enzymes have important applications in scientific research, they are not typically associated with medical diagnoses or treatments.

Chironomidae is a family of nematoceran flies, also known as non-biting midges or lake flies. They are often mistaken for mosquitoes due to their similar appearance, but they do not bite and are not vectors for disease. Chironomidae species can be found in various aquatic habitats such as lakes, rivers, and wetlands. The larvae of these flies are an important food source for many fish and other aquatic organisms. Adult chironomids are also known to emerge in large numbers in a synchronized fashion, particularly near bodies of water, which can be a nuisance to nearby human populations.

Insulin-like Growth Factor Binding Protein 3 (IGFBP-3) is a protein that binds to and regulates the bioavailability and activity of Insulin-like Growth Factors (IGFs), specifically IGF-1 and IGF-2. It plays a crucial role in the growth, development, and homeostasis of various tissues and organs by modulating IGF signaling. IGFBP-3 is the most abundant IGF binding protein in circulation and has a longer half-life than IGFs, allowing it to act as a reservoir and transport protein for IGFs. Additionally, IGFBP-3 has been found to have IGF-independent functions, including roles in cell growth, differentiation, apoptosis, and tumor suppression.

Polyribonucleotides are long, chain-like molecules composed of multiple ribonucleotide monomers. Ribonucleotides themselves consist of a ribose sugar, a phosphate group, and one of the four nitrogenous bases: adenine (A), uracil (U), guanine (G), or cytosine (C). In polyribonucleotides, these ribonucleotide monomers are linked together by ester bonds between the phosphate group of one monomer and the ribose sugar of another.

These molecules play crucial roles in various biological processes, such as encoding genetic information, regulating gene expression, catalyzing chemical reactions, and serving as structural components within cells. Some examples of polyribonucleotides include messenger RNA (mRNA), ribosomal RNA (rRNA), transfer RNA (tRNA), and small nuclear RNA (snRNA).

In a medical context, polyribonucleotides may be used in therapeutic applications, such as gene therapy or vaccines. For instance, synthetic mRNAs can be designed to encode specific proteins, which can then be introduced into cells to stimulate the production of those proteins for various purposes, including immunization against infectious diseases or cancer treatment.

Coatomer is a protein complex that plays a role in the formation of transport vesicles within cells. These vesicles are responsible for carrying proteins and other cargo between different cellular compartments. Coatomer gets its name from the coat-like structure it forms on the surface of budding vesicles. It is composed of several individual protein subunits, known as α-COP, β-COP, γ-COP, δ-COP, ε-COP, ζ-COP, and η-COP. These subunits work together to help recognize and bind to specific proteins, curvature the membrane, and ultimately pinch off the vesicle from the donor compartment.

Coatomer protein is primarily involved in transport between the endoplasmic reticulum (ER) and the Golgi apparatus, but it also plays a role in other intracellular transport processes. Mutations or dysfunction in coatomer proteins have been linked to various diseases, including neurological disorders and cancer.

Periplasmic binding proteins (PBPs) are a type of water-soluble protein found in the periplasmic space of gram-negative bacteria. They play a crucial role in the bacterial uptake of specific nutrients, such as amino acids, sugars, and ions, through a process known as active transport.

PBPs function by specifically binding to their target substrates in the extracellular environment and then shuttling them across the inner membrane into the cytoplasm. This is achieved through a complex series of interactions with other proteins, including transmembrane permeases and ATP-binding cassette (ABC) transporters.

The binding of PBPs to their substrates typically results in a conformational change that allows for the transport of the substrate across the inner membrane. Once inside the cytoplasm, the substrate can be used for various metabolic processes, such as energy production or biosynthesis.

PBPs are often used as targets for the development of new antibiotics, as they play a critical role in bacterial survival and virulence. Inhibiting their function can disrupt essential physiological processes and lead to bacterial death.

A peptide fragment is a short chain of amino acids that is derived from a larger peptide or protein through various biological or chemical processes. These fragments can result from the natural breakdown of proteins in the body during regular physiological processes, such as digestion, or they can be produced experimentally in a laboratory setting for research or therapeutic purposes.

Peptide fragments are often used in research to map the structure and function of larger peptides and proteins, as well as to study their interactions with other molecules. In some cases, peptide fragments may also have biological activity of their own and can be developed into drugs or diagnostic tools. For example, certain peptide fragments derived from hormones or neurotransmitters may bind to receptors in the body and mimic or block the effects of the full-length molecule.

A mutation is a permanent change in the DNA sequence of an organism's genome. Mutations can occur spontaneously or be caused by environmental factors such as exposure to radiation, chemicals, or viruses. They may have various effects on the organism, ranging from benign to harmful, depending on where they occur and whether they alter the function of essential proteins. In some cases, mutations can increase an individual's susceptibility to certain diseases or disorders, while in others, they may confer a survival advantage. Mutations are the driving force behind evolution, as they introduce new genetic variability into populations, which can then be acted upon by natural selection.

"Cattle" is a term used in the agricultural and veterinary fields to refer to domesticated animals of the genus *Bos*, primarily *Bos taurus* (European cattle) and *Bos indicus* (Zebu). These animals are often raised for meat, milk, leather, and labor. They are also known as bovines or cows (for females), bulls (intact males), and steers/bullocks (castrated males). However, in a strict medical definition, "cattle" does not apply to humans or other animals.

Phosphorylation is the process of adding a phosphate group (a molecule consisting of one phosphorus atom and four oxygen atoms) to a protein or other organic molecule, which is usually done by enzymes called kinases. This post-translational modification can change the function, localization, or activity of the target molecule, playing a crucial role in various cellular processes such as signal transduction, metabolism, and regulation of gene expression. Phosphorylation is reversible, and the removal of the phosphate group is facilitated by enzymes called phosphatases.

Recombinant fusion proteins are artificially created biomolecules that combine the functional domains or properties of two or more different proteins into a single protein entity. They are generated through recombinant DNA technology, where the genes encoding the desired protein domains are linked together and expressed as a single, chimeric gene in a host organism, such as bacteria, yeast, or mammalian cells.

The resulting fusion protein retains the functional properties of its individual constituent proteins, allowing for novel applications in research, diagnostics, and therapeutics. For instance, recombinant fusion proteins can be designed to enhance protein stability, solubility, or immunogenicity, making them valuable tools for studying protein-protein interactions, developing targeted therapies, or generating vaccines against infectious diseases or cancer.

Examples of recombinant fusion proteins include:

1. Etaglunatide (ABT-523): A soluble Fc fusion protein that combines the heavy chain fragment crystallizable region (Fc) of an immunoglobulin with the extracellular domain of the human interleukin-6 receptor (IL-6R). This fusion protein functions as a decoy receptor, neutralizing IL-6 and its downstream signaling pathways in rheumatoid arthritis.
2. Etanercept (Enbrel): A soluble TNF receptor p75 Fc fusion protein that binds to tumor necrosis factor-alpha (TNF-α) and inhibits its proinflammatory activity, making it a valuable therapeutic option for treating autoimmune diseases like rheumatoid arthritis, ankylosing spondylitis, and psoriasis.
3. Abatacept (Orencia): A fusion protein consisting of the extracellular domain of cytotoxic T-lymphocyte antigen 4 (CTLA-4) linked to the Fc region of an immunoglobulin, which downregulates T-cell activation and proliferation in autoimmune diseases like rheumatoid arthritis.
4. Belimumab (Benlysta): A monoclonal antibody that targets B-lymphocyte stimulator (BLyS) protein, preventing its interaction with the B-cell surface receptor and inhibiting B-cell activation in systemic lupus erythematosus (SLE).
5. Romiplostim (Nplate): A fusion protein consisting of a thrombopoietin receptor agonist peptide linked to an immunoglobulin Fc region, which stimulates platelet production in patients with chronic immune thrombocytopenia (ITP).
6. Darbepoetin alfa (Aranesp): A hyperglycosylated erythropoiesis-stimulating protein that functions as a longer-acting form of recombinant human erythropoietin, used to treat anemia in patients with chronic kidney disease or cancer.
7. Palivizumab (Synagis): A monoclonal antibody directed against the F protein of respiratory syncytial virus (RSV), which prevents RSV infection and is administered prophylactically to high-risk infants during the RSV season.
8. Ranibizumab (Lucentis): A recombinant humanized monoclonal antibody fragment that binds and inhibits vascular endothelial growth factor A (VEGF-A), used in the treatment of age-related macular degeneration, diabetic retinopathy, and other ocular disorders.
9. Cetuximab (Erbitux): A chimeric monoclonal antibody that binds to epidermal growth factor receptor (EGFR), used in the treatment of colorectal cancer and head and neck squamous cell carcinoma.
10. Adalimumab (Humira): A fully humanized monoclonal antibody that targets tumor necrosis factor-alpha (TNF-α), used in the treatment of various inflammatory diseases, including rheumatoid arthritis, psoriasis, and Crohn's disease.
11. Bevacizumab (Avastin): A recombinant humanized monoclonal antibody that binds to VEGF-A, used in the treatment of various cancers, including colorectal, lung, breast, and kidney cancer.
12. Trastuzumab (Herceptin): A humanized monoclonal antibody that targets HER2/neu receptor, used in the treatment of breast cancer.
13. Rituximab (Rituxan): A chimeric monoclonal antibody that binds to CD20 antigen on B cells, used in the treatment of non-Hodgkin's lymphoma and rheumatoid arthritis.
14. Palivizumab (Synagis): A humanized monoclonal antibody that binds to the F protein of respiratory syncytial virus, used in the prevention of respiratory syncytial virus infection in high-risk infants.
15. Infliximab (Remicade): A chimeric monoclonal antibody that targets TNF-α, used in the treatment of various inflammatory diseases, including Crohn's disease, ulcerative colitis, rheumatoid arthritis, and ankylosing spondylitis.
16. Natalizumab (Tysabri): A humanized monoclonal antibody that binds to α4β1 integrin, used in the treatment of multiple sclerosis and Crohn's disease.
17. Adalimumab (Humira): A fully human monoclonal antibody that targets TNF-α, used in the treatment of various inflammatory diseases, including rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, Crohn's disease, and ulcerative colitis.
18. Golimumab (Simponi): A fully human monoclonal antibody that targets TNF-α, used in the treatment of rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, and ulcerative colitis.
19. Certolizumab pegol (Cimzia): A PEGylated Fab' fragment of a humanized monoclonal antibody that targets TNF-α, used in the treatment of rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, and Crohn's disease.
20. Ustekinumab (Stelara): A fully human monoclonal antibody that targets IL-12 and IL-23, used in the treatment of psoriasis, psoriatic arthritis, and Crohn's disease.
21. Secukinumab (Cosentyx): A fully human monoclonal antibody that targets IL-17A, used in the treatment of psoriasis, psoriatic arthritis, and ankylosing spondylitis.
22. Ixekizumab (Taltz): A fully human monoclonal antibody that targets IL-17A, used in the treatment of psoriasis and psoriatic arthritis.
23. Brodalumab (Siliq): A fully human monoclonal antibody that targets IL-17 receptor A, used in the treatment of psoriasis.
24. Sarilumab (Kevzara): A fully human monoclonal antibody that targets the IL-6 receptor, used in the treatment of rheumatoid arthritis.
25. Tocilizumab (Actemra): A humanized monoclonal antibody that targets the IL-6 receptor, used in the treatment of rheumatoid arthritis, systemic juvenile idiopathic arthritis, polyarticular juvenile idiopathic arthritis, giant cell arteritis, and chimeric antigen receptor T-cell-induced cytokine release syndrome.
26. Siltuximab (Sylvant): A chimeric monoclonal antibody that targets IL-6, used in the treatment of multicentric Castleman disease.
27. Satralizumab (Enspryng): A humanized monoclonal antibody that targets IL-6 receptor alpha, used in the treatment of neuromyelitis optica spectrum disorder.
28. Sirukumab (Plivensia): A human monoclonal antibody that targets IL-6, used in the treatment

"Cells, cultured" is a medical term that refers to cells that have been removed from an organism and grown in controlled laboratory conditions outside of the body. This process is called cell culture and it allows scientists to study cells in a more controlled and accessible environment than they would have inside the body. Cultured cells can be derived from a variety of sources, including tissues, organs, or fluids from humans, animals, or cell lines that have been previously established in the laboratory.

Cell culture involves several steps, including isolation of the cells from the tissue, purification and characterization of the cells, and maintenance of the cells in appropriate growth conditions. The cells are typically grown in specialized media that contain nutrients, growth factors, and other components necessary for their survival and proliferation. Cultured cells can be used for a variety of purposes, including basic research, drug development and testing, and production of biological products such as vaccines and gene therapies.

It is important to note that cultured cells may behave differently than they do in the body, and results obtained from cell culture studies may not always translate directly to human physiology or disease. Therefore, it is essential to validate findings from cell culture experiments using additional models and ultimately in clinical trials involving human subjects.

Chromogranins are a group of proteins that are stored in the secretory vesicles of neuroendocrine cells, including neurons and endocrine cells. These proteins are co-released with neurotransmitters and hormones upon stimulation of the cells. Chromogranin A is the most abundant and best studied member of this protein family.

Chromogranins have several functions in the body. They play a role in the biogenesis, processing, and storage of neuropeptides and neurotransmitters within secretory vesicles. Additionally, chromogranins can be cleaved into smaller peptides, some of which have hormonal or regulatory activities. For example, vasostatin-1, a peptide derived from chromogranin A, has been shown to have vasodilatory and cardioprotective effects.

Measurement of chromogranin levels in blood can be used as a biomarker for the diagnosis and monitoring of neuroendocrine tumors, which are characterized by excessive secretion of chromogranins and other neuroendocrine markers.

Tacrolimus Binding Protein 1A, also known as FKBP12 or FK506 binding protein 12, is a intracellular protein that binds to the immunosuppressive drug tacrolimus (FK506) and forms a complex. This complex inhibits the calcium-dependent serine/threonine phosphatase calcineurin, which plays a crucial role in T-cell activation. By inhibiting calcineurin, tacrolimus suppresses the immune response, particularly the activation of T-lymphocytes, and is used to prevent rejection in organ transplantation. FKBP12 is a member of the immunophilin family and has peptidyl-prolyl cis-trans isomerase activity.

Nuclear proteins are a category of proteins that are primarily found in the nucleus of a eukaryotic cell. They play crucial roles in various nuclear functions, such as DNA replication, transcription, repair, and RNA processing. This group includes structural proteins like lamins, which form the nuclear lamina, and regulatory proteins, such as histones and transcription factors, that are involved in gene expression. Nuclear localization signals (NLS) often help target these proteins to the nucleus by interacting with importin proteins during active transport across the nuclear membrane.

Latent Transforming Growth Factor-beta (TGF-β) binding proteins (LTBPs) are a family of extracellular matrix proteins that play a crucial role in the regulation and localization of TGF-β, a cytokine involved in various cellular processes such as cell growth, differentiation, and apoptosis. LTBPs bind to and help to stabilize the latent form of TGF-β, which is an inactive form of the cytokine. This binding keeps TGF-β in its inactive state until it is needed for use.

There are four members in the LTBP family (LTBP-1, -2, -3, and -4) that share structural similarities with fibrillin, a major component of microfibrils in the extracellular matrix. LTBPs can undergo proteolytic processing, releasing the latent TGF-β complex from the extracellular matrix, allowing for its activation and subsequent interaction with its receptors on the cell surface.

Abnormalities in LTBP function or expression have been implicated in various diseases, including fibrosis, cancer, and Marfan syndrome. Therefore, understanding the role of LTBPs in TGF-β regulation is essential for developing therapeutic strategies to target these conditions.

HeLa cells are a type of immortalized cell line used in scientific research. They are derived from a cancer that developed in the cervical tissue of Henrietta Lacks, an African-American woman, in 1951. After her death, cells taken from her tumor were found to be capable of continuous division and growth in a laboratory setting, making them an invaluable resource for medical research.

HeLa cells have been used in a wide range of scientific studies, including research on cancer, viruses, genetics, and drug development. They were the first human cell line to be successfully cloned and are able to grow rapidly in culture, doubling their population every 20-24 hours. This has made them an essential tool for many areas of biomedical research.

It is important to note that while HeLa cells have been instrumental in numerous scientific breakthroughs, the story of their origin raises ethical questions about informed consent and the use of human tissue in research.

5,7-Dihydroxytryptamine is a chemical compound that is a derivative of the neurotransmitter serotonin. It is formed by the hydroxylation of serotonin at the 5 and 7 positions of its indole ring. This compound is not typically found in significant concentrations in the body, but it can be synthesized and used for research purposes.

In the laboratory, 5,7-Dihydroxytryptamine has been used as a tool to study the role of serotonin in various physiological processes. For example, researchers have used this compound to selectively destroy serotonergic neurons in animal models, allowing them to investigate the functions of these neurons and their contributions to behavior and brain function.

It is important to note that 5,7-Dihydroxytryptamine is not a medication or therapeutic agent, and it should only be used in research settings under the guidance of trained professionals.

Sequence homology, amino acid, refers to the similarity in the order of amino acids in a protein or a portion of a protein between two or more species. This similarity can be used to infer evolutionary relationships and functional similarities between proteins. The higher the degree of sequence homology, the more likely it is that the proteins are related and have similar functions. Sequence homology can be determined through various methods such as pairwise alignment or multiple sequence alignment, which compare the sequences and calculate a score based on the number and type of matching amino acids.

Amino acids are organic compounds that serve as the building blocks of proteins. They consist of a central carbon atom, also known as the alpha carbon, which is bonded to an amino group (-NH2), a carboxyl group (-COOH), a hydrogen atom (H), and a variable side chain (R group). The R group can be composed of various combinations of atoms such as hydrogen, oxygen, sulfur, nitrogen, and carbon, which determine the unique properties of each amino acid.

There are 20 standard amino acids that are encoded by the genetic code and incorporated into proteins during translation. These include:

1. Alanine (Ala)
2. Arginine (Arg)
3. Asparagine (Asn)
4. Aspartic acid (Asp)
5. Cysteine (Cys)
6. Glutamine (Gln)
7. Glutamic acid (Glu)
8. Glycine (Gly)
9. Histidine (His)
10. Isoleucine (Ile)
11. Leucine (Leu)
12. Lysine (Lys)
13. Methionine (Met)
14. Phenylalanine (Phe)
15. Proline (Pro)
16. Serine (Ser)
17. Threonine (Thr)
18. Tryptophan (Trp)
19. Tyrosine (Tyr)
20. Valine (Val)

Additionally, there are several non-standard or modified amino acids that can be incorporated into proteins through post-translational modifications, such as hydroxylation, methylation, and phosphorylation. These modifications expand the functional diversity of proteins and play crucial roles in various cellular processes.

Amino acids are essential for numerous biological functions, including protein synthesis, enzyme catalysis, neurotransmitter production, energy metabolism, and immune response regulation. Some amino acids can be synthesized by the human body (non-essential), while others must be obtained through dietary sources (essential).

Western blotting is a laboratory technique used in molecular biology to detect and quantify specific proteins in a mixture of many different proteins. This technique is commonly used to confirm the expression of a protein of interest, determine its size, and investigate its post-translational modifications. The name "Western" blotting distinguishes this technique from Southern blotting (for DNA) and Northern blotting (for RNA).

The Western blotting procedure involves several steps:

1. Protein extraction: The sample containing the proteins of interest is first extracted, often by breaking open cells or tissues and using a buffer to extract the proteins.
2. Separation of proteins by electrophoresis: The extracted proteins are then separated based on their size by loading them onto a polyacrylamide gel and running an electric current through the gel (a process called sodium dodecyl sulfate-polyacrylamide gel electrophoresis or SDS-PAGE). This separates the proteins according to their molecular weight, with smaller proteins migrating faster than larger ones.
3. Transfer of proteins to a membrane: After separation, the proteins are transferred from the gel onto a nitrocellulose or polyvinylidene fluoride (PVDF) membrane using an electric current in a process called blotting. This creates a replica of the protein pattern on the gel but now immobilized on the membrane for further analysis.
4. Blocking: The membrane is then blocked with a blocking agent, such as non-fat dry milk or bovine serum albumin (BSA), to prevent non-specific binding of antibodies in subsequent steps.
5. Primary antibody incubation: A primary antibody that specifically recognizes the protein of interest is added and allowed to bind to its target protein on the membrane. This step may be performed at room temperature or 4°C overnight, depending on the antibody's properties.
6. Washing: The membrane is washed with a buffer to remove unbound primary antibodies.
7. Secondary antibody incubation: A secondary antibody that recognizes the primary antibody (often coupled to an enzyme or fluorophore) is added and allowed to bind to the primary antibody. This step may involve using a horseradish peroxidase (HRP)-conjugated or alkaline phosphatase (AP)-conjugated secondary antibody, depending on the detection method used later.
8. Washing: The membrane is washed again to remove unbound secondary antibodies.
9. Detection: A detection reagent is added to visualize the protein of interest by detecting the signal generated from the enzyme-conjugated or fluorophore-conjugated secondary antibody. This can be done using chemiluminescent, colorimetric, or fluorescent methods.
10. Analysis: The resulting image is analyzed to determine the presence and quantity of the protein of interest in the sample.

Western blotting is a powerful technique for identifying and quantifying specific proteins within complex mixtures. It can be used to study protein expression, post-translational modifications, protein-protein interactions, and more. However, it requires careful optimization and validation to ensure accurate and reproducible results.

Transfection is a term used in molecular biology that refers to the process of deliberately introducing foreign genetic material (DNA, RNA or artificial gene constructs) into cells. This is typically done using chemical or physical methods, such as lipofection or electroporation. Transfection is widely used in research and medical settings for various purposes, including studying gene function, producing proteins, developing gene therapies, and creating genetically modified organisms. It's important to note that transfection is different from transduction, which is the process of introducing genetic material into cells using viruses as vectors.

Phosphoproteins are proteins that have been post-translationally modified by the addition of a phosphate group (-PO3H2) onto specific amino acid residues, most commonly serine, threonine, or tyrosine. This process is known as phosphorylation and is mediated by enzymes called kinases. Phosphoproteins play crucial roles in various cellular processes such as signal transduction, cell cycle regulation, metabolism, and gene expression. The addition or removal of a phosphate group can activate or inhibit the function of a protein, thereby serving as a switch to control its activity. Phosphoproteins can be detected and quantified using techniques such as Western blotting, mass spectrometry, and immunofluorescence.

Insulin-like Growth Factor Binding Protein 2 (IGFBP-2) is a protein that belongs to the insulin-like growth factor binding protein family. These proteins play a crucial role in regulating the bioavailability and activity of insulin-like growth factors (IGFs), particularly IGF-I and IGF-II, which are important for cell growth, differentiation, and survival.

IGFBP-2 has a high affinity for both IGF-I and IGF-II and functions to modulate their interaction with the IGF receptors. By binding to IGFs, IGFBP-2 can either prolong or shorten their half-life, influence their distribution, and control their access to cell surface receptors. This regulation is essential for maintaining proper growth and development, as well as for preventing uncontrolled cell proliferation and cancer progression.

In addition to its IGF-binding function, IGFBP-2 has also been shown to have IGF-independent effects on various cellular processes, including inflammation, apoptosis, and angiogenesis. These properties make IGFBP-2 a potential biomarker for several diseases, such as cancer, diabetes, and neurodegenerative disorders.

Protein conformation refers to the specific three-dimensional shape that a protein molecule assumes due to the spatial arrangement of its constituent amino acid residues and their associated chemical groups. This complex structure is determined by several factors, including covalent bonds (disulfide bridges), hydrogen bonds, van der Waals forces, and ionic bonds, which help stabilize the protein's unique conformation.

Protein conformations can be broadly classified into two categories: primary, secondary, tertiary, and quaternary structures. The primary structure represents the linear sequence of amino acids in a polypeptide chain. The secondary structure arises from local interactions between adjacent amino acid residues, leading to the formation of recurring motifs such as α-helices and β-sheets. Tertiary structure refers to the overall three-dimensional folding pattern of a single polypeptide chain, while quaternary structure describes the spatial arrangement of multiple folded polypeptide chains (subunits) that interact to form a functional protein complex.

Understanding protein conformation is crucial for elucidating protein function, as the specific three-dimensional shape of a protein directly influences its ability to interact with other molecules, such as ligands, nucleic acids, or other proteins. Any alterations in protein conformation due to genetic mutations, environmental factors, or chemical modifications can lead to loss of function, misfolding, aggregation, and disease states like neurodegenerative disorders and cancer.

Chromogranin A is a protein that is widely used as a marker for neuroendocrine tumors. These are tumors that arise from cells of the neuroendocrine system, which is a network of cells throughout the body that produce hormones and help to regulate various bodily functions. Chromogranin A is stored in secretory granules within these cells and is released into the bloodstream when the cells are stimulated to release their hormones.

Chromogranin A is measured in the blood as a way to help diagnose neuroendocrine tumors, monitor the effectiveness of treatment, and track the progression of the disease. Elevated levels of chromogranin A in the blood may indicate the presence of a neuroendocrine tumor, although other factors can also cause an increase in this protein.

It's important to note that while chromogranin A is a useful marker for neuroendocrine tumors, it is not specific to any one type of tumor and should be used in conjunction with other diagnostic tests and clinical evaluation.

Acute-phase proteins (APPs) are a group of plasma proteins whose concentrations change in response to various inflammatory conditions, such as infection, trauma, or tissue damage. They play crucial roles in the body's defense mechanisms and help mediate the innate immune response during the acute phase of an injury or illness.

There are several types of APPs, including:

1. C-reactive protein (CRP): Produced by the liver, CRP is one of the most sensitive markers of inflammation and increases rapidly in response to various stimuli, such as bacterial infections or tissue damage.
2. Serum amyloid A (SAA): Another liver-derived protein, SAA is involved in lipid metabolism and immune regulation. Its concentration rises quickly during the acute phase of inflammation.
3. Fibrinogen: A coagulation factor produced by the liver, fibrinogen plays a vital role in blood clotting and wound healing. Its levels increase during inflammation.
4. Haptoglobin: This protein binds free hemoglobin released from red blood cells, preventing oxidative damage to tissues. Its concentration rises during the acute phase of inflammation.
5. Alpha-1 antitrypsin (AAT): A protease inhibitor produced by the liver, AAT helps regulate the activity of enzymes involved in tissue breakdown and repair. Its levels increase during inflammation to protect tissues from excessive proteolysis.
6. Ceruloplasmin: This copper-containing protein is involved in iron metabolism and antioxidant defense. Its concentration rises during the acute phase of inflammation.
7. Ferritin: A protein responsible for storing iron, ferritin levels increase during inflammation as part of the body's response to infection or tissue damage.

These proteins have diagnostic and prognostic value in various clinical settings, such as monitoring disease activity, assessing treatment responses, and predicting outcomes in patients with infectious, autoimmune, or inflammatory conditions.

The TATA-box binding protein (TBP) is a general transcription factor that plays a crucial role in the initiation of transcription of protein-coding genes in archaea and eukaryotes. It is named after its ability to bind to the TATA box, a conserved DNA sequence found in the promoter regions of many genes.

TBP is a key component of the transcription preinitiation complex (PIC), which also includes other general transcription factors and RNA polymerase II in eukaryotes. The TBP protein has a unique structure, characterized by a saddle-shaped DNA-binding domain that allows it to recognize and bind to the TATA box in a sequence-specific manner.

By binding to the TATA box, TBP helps to position the RNA polymerase II complex at the start site of transcription, allowing for the initiation of RNA synthesis. TBP also plays a role in regulating gene expression by interacting with various coactivators and corepressors that modulate its activity.

Mutations in the TBP gene have been associated with several human diseases, including some forms of cancer and neurodevelopmental disorders.

Gonorrhea is a sexually transmitted infection (STI) caused by the bacterium Neisseria gonorrhoeae, also known as "gono" bacteria. It can infect various parts of the body including the genitals, rectum, and throat. The bacteria are typically transmitted through sexual contact with an infected person.

Symptoms may vary but often include abnormal discharge from the genitals or rectum, painful or burning sensations during urination, and in women, vaginal bleeding between periods. However, many people with gonorrhea do not develop symptoms, making it essential to get tested regularly if you are sexually active with multiple partners or have unprotected sex.

If left untreated, gonorrhea can lead to severe complications such as pelvic inflammatory disease (PID) in women and epididymitis in men, which may result in infertility. In rare cases, it can spread to the bloodstream and cause life-threatening conditions like sepsis.

Gonorrhea is curable with appropriate antibiotic treatment; however, drug-resistant strains of the bacteria have emerged, making accurate diagnosis and effective treatment increasingly challenging. Prevention methods include using condoms during sexual activity and practicing safe sex habits.

Protein biosynthesis is the process by which cells generate new proteins. It involves two major steps: transcription and translation. Transcription is the process of creating a complementary RNA copy of a sequence of DNA. This RNA copy, or messenger RNA (mRNA), carries the genetic information to the site of protein synthesis, the ribosome. During translation, the mRNA is read by transfer RNA (tRNA) molecules, which bring specific amino acids to the ribosome based on the sequence of nucleotides in the mRNA. The ribosome then links these amino acids together in the correct order to form a polypeptide chain, which may then fold into a functional protein. Protein biosynthesis is essential for the growth and maintenance of all living organisms.

COP-coated vesicles refer to transport vesicles that are coated with coat proteins (COPs) during their formation and play a crucial role in intracellular trafficking. These vesicles are involved in the transport of proteins and lipids between different cellular compartments, such as the endoplasmic reticulum, Golgi apparatus, and plasma membrane.

There are two main types of COP-coated vesicles: COPI (coat protein I) and COPII (coat protein II) coated vesicles.

COPI-coated vesicles are involved in the retrograde transport of proteins from the Golgi apparatus to the endoplasmic reticulum, as well as intra-Golgi trafficking. They are formed by the assembly of coatomer proteins (COPs) around a budding membrane, which then pinches off to form a vesicle. The COPI coat is disassembled upon arrival at the target membrane, releasing the cargo and allowing for fusion with the target membrane.

On the other hand, COPII-coated vesicles are involved in the anterograde transport of proteins from the endoplasmic reticulum to the Golgi apparatus. They are formed by the assembly of Sar1, Sec23/24, and Sec13/31 coat proteins around a budding membrane, which then pinches off to form a vesicle. The COPII coat is disassembled upon arrival at the target membrane, releasing the cargo and allowing for fusion with the target membrane.

Overall, COP-coated vesicles are essential components of the intracellular transport machinery that enables cells to regulate their protein and lipid composition in a precise and coordinated manner.

Insulin-like growth factor binding protein 1 (IGFBP-1) is a protein that belongs to the insulin-like growth factor binding protein family. These proteins play a crucial role in regulating the biological actions of insulin-like growth factors (IGFs), specifically IGF-I and IGF-II, by controlling their availability and activity in the body.

IGFBP-1 is primarily produced by the liver and secreted into the bloodstream. It has a high affinity for IGF-I and, to a lesser extent, IGF-II, forming complexes that can either prolong or shorten the half-life of these growth factors in circulation, depending on various physiological conditions.

In addition to its role as an IGF carrier protein, IGFBP-1 also exhibits IGF-independent functions, such as interacting with cell surface receptors and extracellular matrix components, which contribute to the regulation of cell growth, differentiation, and survival. The expression and secretion of IGFBP-1 are influenced by several factors, including hormonal status, nutritional state, and metabolic conditions, making it a valuable biomarker for various physiological and pathological processes.

Molecular models are three-dimensional representations of molecular structures that are used in the field of molecular biology and chemistry to visualize and understand the spatial arrangement of atoms and bonds within a molecule. These models can be physical or computer-generated and allow researchers to study the shape, size, and behavior of molecules, which is crucial for understanding their function and interactions with other molecules.

Physical molecular models are often made up of balls (representing atoms) connected by rods or sticks (representing bonds). These models can be constructed manually using materials such as plastic or wooden balls and rods, or they can be created using 3D printing technology.

Computer-generated molecular models, on the other hand, are created using specialized software that allows researchers to visualize and manipulate molecular structures in three dimensions. These models can be used to simulate molecular interactions, predict molecular behavior, and design new drugs or chemicals with specific properties. Overall, molecular models play a critical role in advancing our understanding of molecular structures and their functions.

A plasmid is a small, circular, double-stranded DNA molecule that is separate from the chromosomal DNA of a bacterium or other organism. Plasmids are typically not essential for the survival of the organism, but they can confer beneficial traits such as antibiotic resistance or the ability to degrade certain types of pollutants.

Plasmids are capable of replicating independently of the chromosomal DNA and can be transferred between bacteria through a process called conjugation. They often contain genes that provide resistance to antibiotics, heavy metals, and other environmental stressors. Plasmids have also been engineered for use in molecular biology as cloning vectors, allowing scientists to replicate and manipulate specific DNA sequences.

Plasmids are important tools in genetic engineering and biotechnology because they can be easily manipulated and transferred between organisms. They have been used to produce vaccines, diagnostic tests, and genetically modified organisms (GMOs) for various applications, including agriculture, medicine, and industry.

CREB (Cyclic AMP Response Element-Binding Protein) is a transcription factor that plays a crucial role in regulating gene expression in response to various cellular signals. CREB binds to the cAMP response element (CRE) sequence in the promoter region of target genes and regulates their transcription.

When activated, CREB undergoes phosphorylation at a specific serine residue (Ser-133), which leads to its binding to the coactivator protein CBP/p300 and recruitment of additional transcriptional machinery to the promoter region. This results in the activation of target gene transcription.

CREB is involved in various cellular processes, including metabolism, differentiation, survival, and memory formation. Dysregulation of CREB has been implicated in several diseases, such as cancer, neurodegenerative disorders, and mood disorders.

Macromolecular substances, also known as macromolecules, are large, complex molecules made up of repeating subunits called monomers. These substances are formed through polymerization, a process in which many small molecules combine to form a larger one. Macromolecular substances can be naturally occurring, such as proteins, DNA, and carbohydrates, or synthetic, such as plastics and synthetic fibers.

In the context of medicine, macromolecular substances are often used in the development of drugs and medical devices. For example, some drugs are designed to bind to specific macromolecules in the body, such as proteins or DNA, in order to alter their function and produce a therapeutic effect. Additionally, macromolecular substances may be used in the creation of medical implants, such as artificial joints and heart valves, due to their strength and durability.

It is important for healthcare professionals to have an understanding of macromolecular substances and how they function in the body, as this knowledge can inform the development and use of medical treatments.

Proteins are complex, large molecules that play critical roles in the body's functions. They are made up of amino acids, which are organic compounds that are the building blocks of proteins. Proteins are required for the structure, function, and regulation of the body's tissues and organs. They are essential for the growth, repair, and maintenance of body tissues, and they play a crucial role in many biological processes, including metabolism, immune response, and cellular signaling. Proteins can be classified into different types based on their structure and function, such as enzymes, hormones, antibodies, and structural proteins. They are found in various foods, especially animal-derived products like meat, dairy, and eggs, as well as plant-based sources like beans, nuts, and grains.

The cell nucleus is a membrane-bound organelle found in the eukaryotic cells (cells with a true nucleus). It contains most of the cell's genetic material, organized as DNA molecules in complex with proteins, RNA molecules, and histones to form chromosomes.

The primary function of the cell nucleus is to regulate and control the activities of the cell, including growth, metabolism, protein synthesis, and reproduction. It also plays a crucial role in the process of mitosis (cell division) by separating and protecting the genetic material during this process. The nuclear membrane, or nuclear envelope, surrounding the nucleus is composed of two lipid bilayers with numerous pores that allow for the selective transport of molecules between the nucleoplasm (nucleus interior) and the cytoplasm (cell exterior).

The cell nucleus is a vital structure in eukaryotic cells, and its dysfunction can lead to various diseases, including cancer and genetic disorders.

Polyadenylation is a post-transcriptional modification process in which a string of adenine (A) nucleotides, known as a poly(A) tail, is added to the 3' end of a newly transcribed eukaryotic mRNA molecule. This process is essential for the stability, export, and translation of the mRNA. The addition of the poly(A) tail is catalyzed by a complex containing several proteins and the enzyme poly(A) polymerase. The length of the poly(A) tail typically ranges from 50 to 250 nucleotides and can be shortened or lengthened in response to various cellular signals, which contributes to the regulation of gene expression.

Trypsin is a proteolytic enzyme, specifically a serine protease, that is secreted by the pancreas as an inactive precursor, trypsinogen. Trypsinogen is converted into its active form, trypsin, in the small intestine by enterokinase, which is produced by the intestinal mucosa.

Trypsin plays a crucial role in digestion by cleaving proteins into smaller peptides at specific arginine and lysine residues. This enzyme helps to break down dietary proteins into amino acids, allowing for their absorption and utilization by the body. Additionally, trypsin can activate other zymogenic pancreatic enzymes, such as chymotrypsinogen and procarboxypeptidases, thereby contributing to overall protein digestion.

I believe there may be some confusion in your question. "Rabbits" is a common name used to refer to the Lagomorpha species, particularly members of the family Leporidae. They are small mammals known for their long ears, strong legs, and quick reproduction.

However, if you're referring to "rabbits" in a medical context, there is a term called "rabbit syndrome," which is a rare movement disorder characterized by repetitive, involuntary movements of the fingers, resembling those of a rabbit chewing. It is also known as "finger-chewing chorea." This condition is usually associated with certain medications, particularly antipsychotics, and typically resolves when the medication is stopped or adjusted.

S100 calcium binding protein G, also known as calgranulin A or S100A8, is a member of the S100 family of proteins. These proteins are characterized by their ability to bind calcium ions and play a role in intracellular signaling and regulation of various cellular processes.

S100 calcium binding protein G forms a heterodimer with S100 calcium binding protein B (S100A9) and is involved in the inflammatory response, immune function, and tumor growth and progression. The S100A8/A9 heterocomplex has been shown to play a role in neutrophil activation and recruitment, as well as the regulation of cytokine production and cell proliferation.

Elevated levels of S100 calcium binding protein G have been found in various inflammatory conditions, such as rheumatoid arthritis, Crohn's disease, and psoriasis, as well as in several types of cancer, including breast, lung, and colon cancer. Therefore, it has been suggested that S100 calcium binding protein G may be a useful biomarker for the diagnosis and prognosis of these conditions.

Tretinoin is a form of vitamin A that is used in the treatment of acne vulgaris, fine wrinkles, and dark spots caused by aging or sun damage. It works by increasing the turnover of skin cells, helping to unclog pores and promote the growth of new skin cells. Tretinoin is available as a cream, gel, or liquid, and is usually applied to the affected area once a day in the evening. Common side effects include redness, dryness, and peeling of the skin. It is important to avoid sunlight and use sunscreen while using tretinoin, as it can make the skin more sensitive to the sun.

CREB-binding protein (CBP) is a transcription coactivator that plays a crucial role in regulating gene expression. It is called a "coactivator" because it works together with other proteins, such as transcription factors, to enhance the process of gene transcription. CBP is so named because it can bind to the cAMP response element-binding (CREB) protein, which is a transcription factor that regulates the expression of various genes in response to different signals within cells.

CBP has intrinsic histone acetyltransferase (HAT) activity, which means it can add acetyl groups to histone proteins around which DNA is wound. This modification loosens the chromatin structure, making it more accessible for transcription factors and other proteins involved in gene expression. As a result, CBP acts as a global regulator of gene expression, influencing various cellular processes such as development, differentiation, and homeostasis.

Mutations in the CBP gene have been associated with several human diseases, including Rubinstein-Taybi syndrome, a rare genetic disorder characterized by growth retardation, mental deficiency, and distinct facial features. Additionally, CBP has been implicated in cancer, as its dysregulation can lead to uncontrolled cell growth and malignant transformation.

I'm sorry for any confusion, but "Polyesters" is not a medical term. It is a term used in materials science and textile industry to describe a type of synthetic fiber made from polymers characterized by the presence of ester groups in their main chain. If you have any questions related to medical terminology or concepts, I'd be happy to help with those instead!

Circular dichroism (CD) is a technique used in physics and chemistry to study the structure of molecules, particularly large biological molecules such as proteins and nucleic acids. It measures the difference in absorption of left-handed and right-handed circularly polarized light by a sample. This difference in absorption can provide information about the three-dimensional structure of the molecule, including its chirality or "handedness."

In more technical terms, CD is a form of spectroscopy that measures the differential absorption of left and right circularly polarized light as a function of wavelength. The CD signal is measured in units of millidegrees (mdeg) and can be positive or negative, depending on the type of chromophore and its orientation within the molecule.

CD spectra can provide valuable information about the secondary and tertiary structure of proteins, as well as the conformation of nucleic acids. For example, alpha-helical proteins typically exhibit a strong positive band near 190 nm and two negative bands at around 208 nm and 222 nm, while beta-sheet proteins show a strong positive band near 195 nm and two negative bands at around 217 nm and 175 nm.

CD spectroscopy is a powerful tool for studying the structural changes that occur in biological molecules under different conditions, such as temperature, pH, or the presence of ligands or other molecules. It can also be used to monitor the folding and unfolding of proteins, as well as the binding of drugs or other small molecules to their targets.

Immunodiffusion is a laboratory technique used in immunology to detect and measure the presence of specific antibodies or antigens in a sample. It is based on the principle of diffusion, where molecules move from an area of high concentration to an area of low concentration until they reach equilibrium. In this technique, a sample containing an unknown quantity of antigen or antibody is placed in a gel or agar medium that contains a known quantity of antibody or antigen, respectively.

The two substances then diffuse towards each other and form a visible precipitate at the point where they meet and reach equivalence, which indicates the presence and quantity of the specific antigen or antibody in the sample. There are several types of immunodiffusion techniques, including radial immunodiffusion (RID) and double immunodiffusion (Ouchterlony technique). These techniques are widely used in diagnostic laboratories to identify and measure various antigens and antibodies, such as those found in infectious diseases, autoimmune disorders, and allergic reactions.

Heterogeneous Nuclear Ribonucleoproteins (hnRNPs) are a type of nuclear protein complex associated with nascent RNA transcripts in the nucleus of eukaryotic cells. They play crucial roles in various aspects of RNA metabolism, including processing, transport, stability, and translation.

The term "heterogeneous" refers to the diverse range of proteins that make up these complexes, while "nuclear" indicates their location within the nucleus. The hnRNPs are composed of a core protein component and associated RNA molecules, primarily heterogeneous nuclear RNAs (hnRNAs) or pre-messenger RNAs (pre-mRNAs).

There are over 20 different hnRNP proteins identified so far, each with distinct functions and structures. Some of the well-known hnRNPs include hnRNP A1, hnRNP C, and hnRNP U. These proteins contain several domains that facilitate RNA binding, protein-protein interactions, and post-translational modifications.

The primary function of hnRNPs is to regulate gene expression at the post-transcriptional level by interacting with RNA molecules. They participate in splicing, 3' end processing, export, localization, stability, and translation of mRNAs. Dysregulation of hnRNP function has been implicated in various human diseases, including neurological disorders and cancer.

Tertiary protein structure refers to the three-dimensional arrangement of all the elements (polypeptide chains) of a single protein molecule. It is the highest level of structural organization and results from interactions between various side chains (R groups) of the amino acids that make up the protein. These interactions, which include hydrogen bonds, ionic bonds, van der Waals forces, and disulfide bridges, give the protein its unique shape and stability, which in turn determines its function. The tertiary structure of a protein can be stabilized by various factors such as temperature, pH, and the presence of certain ions. Any changes in these factors can lead to denaturation, where the protein loses its tertiary structure and thus its function.

Calcium is an essential mineral that is vital for various physiological processes in the human body. The medical definition of calcium is as follows:

Calcium (Ca2+) is a crucial cation and the most abundant mineral in the human body, with approximately 99% of it found in bones and teeth. It plays a vital role in maintaining structural integrity, nerve impulse transmission, muscle contraction, hormonal secretion, blood coagulation, and enzyme activation.

Calcium homeostasis is tightly regulated through the interplay of several hormones, including parathyroid hormone (PTH), calcitonin, and vitamin D. Dietary calcium intake, absorption, and excretion are also critical factors in maintaining optimal calcium levels in the body.

Hypocalcemia refers to low serum calcium levels, while hypercalcemia indicates high serum calcium levels. Both conditions can have detrimental effects on various organ systems and require medical intervention to correct.

Polypyrimidine Tract-Binding Protein (PTB) is a protein that binds to specific sequences of RNA molecules, including polypyrimidine tracts, which are stretches of uracil and cytosine nucleotides. PTB plays a crucial role in post-transcriptional regulation of gene expression by affecting alternative splicing, polyadenylation, stability, and translation of target RNAs. It has been implicated in various cellular processes, such as neuronal development, differentiation, and oncogenesis. Mutations in the PTB gene have been associated with several human diseases, including neurological disorders and cancer.

CCAAT-Enhancer-Binding Proteins (C/EBPs) are a family of transcription factors that play crucial roles in the regulation of various biological processes, including cell growth, development, and differentiation. They bind to specific DNA sequences called CCAAT boxes, which are found in the promoter or enhancer regions of many genes.

The C/EBP family consists of several members, including C/EBPα, C/EBPβ, C/EBPγ, C/EBPδ, and C/EBPε. These proteins share a highly conserved basic region-leucine zipper (bZIP) domain, which is responsible for their DNA-binding and dimerization activities.

C/EBPs can form homodimers or heterodimers with other bZIP proteins, allowing them to regulate gene expression in a combinatorial manner. They are involved in the regulation of various physiological processes, such as inflammation, immune response, metabolism, and cell cycle control. Dysregulation of C/EBP function has been implicated in several diseases, including cancer, diabetes, and inflammatory disorders.

A cell membrane, also known as the plasma membrane, is a thin semi-permeable phospholipid bilayer that surrounds all cells in animals, plants, and microorganisms. It functions as a barrier to control the movement of substances in and out of the cell, allowing necessary molecules such as nutrients, oxygen, and signaling molecules to enter while keeping out harmful substances and waste products. The cell membrane is composed mainly of phospholipids, which have hydrophilic (water-loving) heads and hydrophobic (water-fearing) tails. This unique structure allows the membrane to be flexible and fluid, yet selectively permeable. Additionally, various proteins are embedded in the membrane that serve as channels, pumps, receptors, and enzymes, contributing to the cell's overall functionality and communication with its environment.

Vitamin D-Binding Protein (DBP), also known as Group-specific Component (Gc-globulin), is a protein that binds and transports vitamin D and its metabolites in the bloodstream. It plays a crucial role in maintaining the homeostasis of vitamin D by regulating the amount of free, active vitamin D available to cells. DBP also has other functions, including acting as an actin scavenger to prevent the formation of harmful actin aggregates in circulation and participating in immune responses.

Cross-linking reagents are chemical agents that are used to create covalent bonds between two or more molecules, creating a network of interconnected molecules known as a cross-linked structure. In the context of medical and biological research, cross-linking reagents are often used to stabilize protein structures, study protein-protein interactions, and develop therapeutic agents.

Cross-linking reagents work by reacting with functional groups on adjacent molecules, such as amino groups (-NH2) or sulfhydryl groups (-SH), to form a covalent bond between them. This can help to stabilize protein structures and prevent them from unfolding or aggregating.

There are many different types of cross-linking reagents, each with its own specificity and reactivity. Some common examples include glutaraldehyde, formaldehyde, disuccinimidyl suberate (DSS), and bis(sulfosuccinimidyl) suberate (BS3). The choice of cross-linking reagent depends on the specific application and the properties of the molecules being cross-linked.

It is important to note that cross-linking reagents can also have unintended effects, such as modifying or disrupting the function of the proteins they are intended to stabilize. Therefore, it is essential to use them carefully and with appropriate controls to ensure accurate and reliable results.

Protein kinases are a group of enzymes that play a crucial role in many cellular processes by adding phosphate groups to other proteins, a process known as phosphorylation. This modification can activate or deactivate the target protein's function, thereby regulating various signaling pathways within the cell. Protein kinases are essential for numerous biological functions, including metabolism, signal transduction, cell cycle progression, and apoptosis (programmed cell death). Abnormal regulation of protein kinases has been implicated in several diseases, such as cancer, diabetes, and neurological disorders.

DNA replication is the biological process by which DNA makes an identical copy of itself during cell division. It is a fundamental mechanism that allows genetic information to be passed down from one generation of cells to the next. During DNA replication, each strand of the double helix serves as a template for the synthesis of a new complementary strand. This results in the creation of two identical DNA molecules. The enzymes responsible for DNA replication include helicase, which unwinds the double helix, and polymerase, which adds nucleotides to the growing strands.

In the context of medical definitions, polymers are large molecules composed of repeating subunits called monomers. These long chains of monomers can have various structures and properties, depending on the type of monomer units and how they are linked together. In medicine, polymers are used in a wide range of applications, including drug delivery systems, medical devices, and tissue engineering scaffolds. Some examples of polymers used in medicine include polyethylene, polypropylene, polystyrene, polyvinyl chloride (PVC), and biodegradable polymers such as polylactic acid (PLA) and polycaprolactone (PCL).

Agglutination tests are laboratory diagnostic procedures used to detect the presence of antibodies or antigens in a sample, such as blood or serum. These tests work by observing the clumping (agglutination) of particles, like red blood cells or bacteriophages, coated with specific antigens or antibodies when mixed with a patient's sample.

In an agglutination test, the sample is typically combined with a reagent containing known antigens or antibodies on the surface of particles, such as latex beads, red blood cells, or bacteriophages. If the sample contains the corresponding antibodies or antigens, they will bind to the particles, forming visible clumps or agglutinates. The presence and strength of agglutination are then assessed visually or with automated equipment to determine the presence and quantity of the target antigen or antibody in the sample.

Agglutination tests are widely used in medical diagnostics for various applications, including:

1. Bacterial and viral infections: To identify specific bacterial or viral antigens in a patient's sample, such as group A Streptococcus, Legionella pneumophila, or HIV.
2. Blood typing: To determine the ABO blood group and Rh type of a donor or recipient before a blood transfusion or organ transplantation.
3. Autoimmune diseases: To detect autoantibodies in patients with suspected autoimmune disorders, such as rheumatoid arthritis, systemic lupus erythematosus, or Hashimoto's thyroiditis.
4. Allergies: To identify specific IgE antibodies in a patient's sample to determine allergic reactions to various substances, such as pollen, food, or venom.
5. Drug monitoring: To detect and quantify the presence of drug-induced antibodies, such as those developed in response to penicillin or hydralazine therapy.

Agglutination tests are simple, rapid, and cost-effective diagnostic tools that provide valuable information for clinical decision-making and patient management. However, they may have limitations, including potential cross-reactivity with other antigens, false-positive results due to rheumatoid factors or heterophile antibodies, and false-negative results due to the prozone effect or insufficient sensitivity. Therefore, it is essential to interpret agglutination test results in conjunction with clinical findings and other laboratory data.

Insulin-like Growth Factor Binding Protein 4 (IGFBP-4) is a protein that belongs to the family of Insulin-like Growth Factor Binding Proteins (IGFBPs). These proteins play a crucial role in regulating the biological actions of Insulin-like Growth Factors (IGFs), particularly IGF-1 and IGF-2, by binding to them and controlling their availability to receptors.

IGFBP-4 is primarily produced by various cell types, including those found in the liver, skeletal muscle, and placenta. It has a high affinity for IGFs, reducing their bioavailability and modulating their interaction with cell surface receptors. This binding protein can also exert IGF-independent effects on cellular processes such as proliferation, differentiation, apoptosis, and migration.

In addition to its role in regulating IGF activity, IGFBP-4 has been implicated in several physiological and pathophysiological processes, including embryonic development, bone metabolism, cancer progression, and cardiovascular diseases. Its expression levels and post-translational modifications can serve as biomarkers for various conditions and disease states.

Porins are a type of protein found in the outer membrane of gram-negative bacteria. They form water-filled channels, or pores, that allow small molecules such as ions, nutrients, and waste products to pass through the otherwise impermeable outer membrane. Porins are important for the survival of gram-negative bacteria, as they enable the selective transport of essential molecules while providing a barrier against harmful substances.

There are different types of porins, classified based on their structure and function. Some examples include:

1. General porins (also known as nonspecific porins): These are the most common type of porins and form large, water-filled channels that allow passive diffusion of small molecules up to 600-700 Da in size. They typically have a trimeric structure, with three identical or similar subunits forming a pore in the membrane.
2. Specific porins: These porins are more selective in the molecules they allow to pass through and often have smaller pores than general porins. They can be involved in the active transport of specific molecules or ions, requiring energy from the cell.
3. Autotransporters: While not strictly considered porins, autotransporter proteins share some structural similarities with porins and are involved in the transport of protein domains across the outer membrane. They consist of an N-terminal passenger domain and a C-terminal translocator domain, which forms a β-barrel pore in the outer membrane through which the passenger domain is transported.

Porins have attracted interest as potential targets for antibiotic development, as they play crucial roles in bacterial survival and virulence. Inhibiting porin function or blocking the pores could disrupt essential processes in gram-negative bacteria, providing a new approach to treating infections caused by these organisms.

Ribonucleoproteins (RNPs) are complexes composed of ribonucleic acid (RNA) and proteins. They play crucial roles in various cellular processes, including gene expression, RNA processing, transport, stability, and degradation. Different types of RNPs exist, such as ribosomes, spliceosomes, and signal recognition particles, each having specific functions in the cell.

Ribosomes are large RNP complexes responsible for protein synthesis, where messenger RNA (mRNA) is translated into proteins. They consist of two subunits: a smaller subunit containing ribosomal RNA (rRNA) and proteins that recognize the start codon on mRNA, and a larger subunit with rRNA and proteins that facilitate peptide bond formation during translation.

Spliceosomes are dynamic RNP complexes involved in pre-messenger RNA (pre-mRNA) splicing, where introns (non-coding sequences) are removed, and exons (coding sequences) are joined together to form mature mRNA. Spliceosomes consist of five small nuclear ribonucleoproteins (snRNPs), each containing a specific small nuclear RNA (snRNA) and several proteins, as well as numerous additional proteins.

Other RNP complexes include signal recognition particles (SRPs), which are responsible for targeting secretory and membrane proteins to the endoplasmic reticulum during translation, and telomerase, an enzyme that maintains the length of telomeres (the protective ends of chromosomes) by adding repetitive DNA sequences using its built-in RNA component.

In summary, ribonucleoproteins are essential complexes in the cell that participate in various aspects of RNA metabolism and protein synthesis.

RNA (Ribonucleic Acid) is a single-stranded, linear polymer of ribonucleotides. It is a nucleic acid present in the cells of all living organisms and some viruses. RNAs play crucial roles in various biological processes such as protein synthesis, gene regulation, and cellular signaling. There are several types of RNA including messenger RNA (mRNA), ribosomal RNA (rRNA), transfer RNA (tRNA), small nuclear RNA (snRNA), microRNA (miRNA), and long non-coding RNA (lncRNA). These RNAs differ in their structure, function, and location within the cell.

Insulin-like Growth Factor Binding Protein 5 (IGFBP-5) is a protein that belongs to the insulin-like growth factor binding protein family. These proteins play a crucial role in regulating the biological actions of insulin-like growth factors (IGFs), particularly IGF-I and IGF-II, by controlling their availability and activity in the body.

IGFBP-5 has a high affinity for IGF-I and IGF-II and can inhibit or modulate their interactions with cell surface receptors. It is primarily produced by various cell types, including hepatocytes, fibroblasts, and osteoblasts, in response to growth hormone stimulation.

In addition to its role in regulating IGF activity, IGFBP-5 has been implicated in several other biological processes, such as:

1. Cell proliferation and differentiation: IGFBP-5 can either promote or inhibit cell growth depending on the context and cell type. It may also contribute to the regulation of cell differentiation, particularly in tissues like bone and cartilage.
2. Apoptosis (programmed cell death): IGFBP-5 has been shown to induce apoptosis under certain conditions, suggesting its potential role in tissue homeostasis and disease processes.
3. Extracellular matrix remodeling: IGFBP-5 can bind to various extracellular matrix components, such as collagens and proteoglycans, and participate in the regulation of matrix turnover and organization.
4. Cell adhesion and migration: IGFBP-5 may influence cell adhesion and migration through interactions with integrins and other cell surface receptors.

Dysregulation of IGFBP-5 expression and activity has been linked to several pathological conditions, including cancer, fibrosis, and bone diseases.

The Golgi apparatus, also known as the Golgi complex or simply the Golgi, is a membrane-bound organelle found in the cytoplasm of most eukaryotic cells. It plays a crucial role in the processing, sorting, and packaging of proteins and lipids for transport to their final destinations within the cell or for secretion outside the cell.

The Golgi apparatus consists of a series of flattened, disc-shaped sacs called cisternae, which are stacked together in a parallel arrangement. These stacks are often interconnected by tubular structures called tubules or vesicles. The Golgi apparatus has two main faces: the cis face, which is closest to the endoplasmic reticulum (ER) and receives proteins and lipids directly from the ER; and the trans face, which is responsible for sorting and dispatching these molecules to their final destinations.

The Golgi apparatus performs several essential functions in the cell:

1. Protein processing: After proteins are synthesized in the ER, they are transported to the cis face of the Golgi apparatus, where they undergo various post-translational modifications, such as glycosylation (the addition of sugar molecules) and sulfation. These modifications help determine the protein's final structure, function, and targeting.
2. Lipid modification: The Golgi apparatus also modifies lipids by adding or removing different functional groups, which can influence their properties and localization within the cell.
3. Protein sorting and packaging: Once proteins and lipids have been processed, they are sorted and packaged into vesicles at the trans face of the Golgi apparatus. These vesicles then transport their cargo to various destinations, such as lysosomes, plasma membrane, or extracellular space.
4. Intracellular transport: The Golgi apparatus serves as a central hub for intracellular trafficking, coordinating the movement of vesicles and other transport carriers between different organelles and cellular compartments.
5. Cell-cell communication: Some proteins that are processed and packaged in the Golgi apparatus are destined for secretion, playing crucial roles in cell-cell communication and maintaining tissue homeostasis.

In summary, the Golgi apparatus is a vital organelle involved in various cellular processes, including post-translational modification, sorting, packaging, and intracellular transport of proteins and lipids. Its proper functioning is essential for maintaining cellular homeostasis and overall organismal health.

Polynucleotides are long, chain-like molecules composed of repeating units called nucleotides. Each nucleotide contains a sugar molecule (deoxyribose in DNA or ribose in RNA), a phosphate group, and a nitrogenous base (adenine, guanine, cytosine, thymine in DNA or adenine, guanine, uracil, cytosine in RNA). In DNA, the nucleotides are joined together by phosphodiester bonds between the sugar of one nucleotide and the phosphate group of the next, creating a double helix structure. In RNA, the nucleotides are also joined by phosphodiester bonds but form a single strand. Polynucleotides play crucial roles in storing and transmitting genetic information within cells.

In genetics, sequence alignment is the process of arranging two or more DNA, RNA, or protein sequences to identify regions of similarity or homology between them. This is often done using computational methods to compare the nucleotide or amino acid sequences and identify matching patterns, which can provide insight into evolutionary relationships, functional domains, or potential genetic disorders. The alignment process typically involves adjusting gaps and mismatches in the sequences to maximize the similarity between them, resulting in an aligned sequence that can be visually represented and analyzed.

Sterol Regulatory Element Binding Protein 1 (SREBP-1) is a transcription factor that plays a crucial role in the regulation of lipid metabolism, primarily cholesterol and fatty acid biosynthesis. It binds to specific DNA sequences called sterol regulatory elements (SREs), which are present in the promoter regions of genes involved in lipid synthesis.

SREBP-1 exists in two isoforms, SREBP-1a and SREBP-1c, encoded by a single gene through alternative splicing. SREBP-1a is a stronger transcriptional activator than SREBP-1c and can activate both cholesterol and fatty acid synthesis genes. In contrast, SREBP-1c primarily regulates fatty acid synthesis genes.

Under normal conditions, SREBP-1 is found in the endoplasmic reticulum (ER) membrane as an inactive precursor bound to another protein called SREBP cleavage-activating protein (SCAP). When cells detect low levels of cholesterol or fatty acids, SCAP escorts SREBP-1 to the Golgi apparatus, where it undergoes proteolytic processing to release the active transcription factor. The active SREBP-1 then translocates to the nucleus and binds to SREs, promoting the expression of genes involved in lipid synthesis.

Overall, SREBP-1 is a critical regulator of lipid homeostasis, and its dysregulation has been implicated in various diseases, including obesity, insulin resistance, nonalcoholic fatty liver disease (NAFLD), and atherosclerosis.

Nucleic acid conformation refers to the three-dimensional structure that nucleic acids (DNA and RNA) adopt as a result of the bonding patterns between the atoms within the molecule. The primary structure of nucleic acids is determined by the sequence of nucleotides, while the conformation is influenced by factors such as the sugar-phosphate backbone, base stacking, and hydrogen bonding.

Two common conformations of DNA are the B-form and the A-form. The B-form is a right-handed helix with a diameter of about 20 Å and a pitch of 34 Å, while the A-form has a smaller diameter (about 18 Å) and a shorter pitch (about 25 Å). RNA typically adopts an A-form conformation.

The conformation of nucleic acids can have significant implications for their function, as it can affect their ability to interact with other molecules such as proteins or drugs. Understanding the conformational properties of nucleic acids is therefore an important area of research in molecular biology and medicine.

"Competitive binding" is a term used in pharmacology and biochemistry to describe the behavior of two or more molecules (ligands) competing for the same binding site on a target protein or receptor. In this context, "binding" refers to the physical interaction between a ligand and its target.

When a ligand binds to a receptor, it can alter the receptor's function, either activating or inhibiting it. If multiple ligands compete for the same binding site, they will compete to bind to the receptor. The ability of each ligand to bind to the receptor is influenced by its affinity for the receptor, which is a measure of how strongly and specifically the ligand binds to the receptor.

In competitive binding, if one ligand is present in high concentrations, it can prevent other ligands with lower affinity from binding to the receptor. This is because the higher-affinity ligand will have a greater probability of occupying the binding site and blocking access to the other ligands. The competition between ligands can be described mathematically using equations such as the Langmuir isotherm, which describes the relationship between the concentration of ligand and the fraction of receptors that are occupied by the ligand.

Competitive binding is an important concept in drug development, as it can be used to predict how different drugs will interact with their targets and how they may affect each other's activity. By understanding the competitive binding properties of a drug, researchers can optimize its dosage and delivery to maximize its therapeutic effect while minimizing unwanted side effects.

Bacterial antigens are substances found on the surface or produced by bacteria that can stimulate an immune response in a host organism. These antigens can be proteins, polysaccharides, teichoic acids, lipopolysaccharides, or other molecules that are recognized as foreign by the host's immune system.

When a bacterial antigen is encountered by the host's immune system, it triggers a series of responses aimed at eliminating the bacteria and preventing infection. The host's immune system recognizes the antigen as foreign through the use of specialized receptors called pattern recognition receptors (PRRs), which are found on various immune cells such as macrophages, dendritic cells, and neutrophils.

Once a bacterial antigen is recognized by the host's immune system, it can stimulate both the innate and adaptive immune responses. The innate immune response involves the activation of inflammatory pathways, the recruitment of immune cells to the site of infection, and the production of antimicrobial peptides.

The adaptive immune response, on the other hand, involves the activation of T cells and B cells, which are specific to the bacterial antigen. These cells can recognize and remember the antigen, allowing for a more rapid and effective response upon subsequent exposures.

Bacterial antigens are important in the development of vaccines, as they can be used to stimulate an immune response without causing disease. By identifying specific bacterial antigens that are associated with virulence or pathogenicity, researchers can develop vaccines that target these antigens and provide protection against infection.

Integrin α5β1, also known as very late antigen-5 (VLA-5) or fibronectin receptor, is a heterodimeric transmembrane receptor protein composed of two subunits: α5 and β1. This integrin is widely expressed in various cell types, including endothelial cells, smooth muscle cells, and fibroblasts.

Integrin α5β1 plays a crucial role in mediating cell-matrix adhesion by binding to the arginine-glycine-aspartic acid (RGD) sequence present in the extracellular matrix protein fibronectin. The interaction between integrin α5β1 and fibronectin is essential for various biological processes, such as cell migration, proliferation, differentiation, and survival. Additionally, this integrin has been implicated in several pathological conditions, including tumor progression, angiogenesis, and fibrosis.

Peptidoglycan is a complex biological polymer made up of sugars and amino acids that forms a crucial component of the cell walls of bacteria. It provides structural support and protection to bacterial cells, contributing to their shape and rigidity. Peptidoglycan is unique to bacterial cell walls and is not found in the cells of other organisms, such as plants, animals, or fungi.

The polymer is composed of linear chains of alternating units of N-acetylglucosamine (NAG) and N-acetylmuramic acid (NAM), which are linked together by glycosidic bonds. The NAM residues contain short peptide side chains, typically consisting of four amino acids, that cross-link adjacent polysaccharide chains, forming a rigid layer around the bacterial cell.

The composition and structure of peptidoglycan can vary between different species of bacteria, which is one factor contributing to their diversity. The enzymes responsible for synthesizing and degrading peptidoglycan are important targets for antibiotics, as inhibiting these processes can weaken or kill the bacterial cells without affecting host organisms.

Complementary DNA (cDNA) is a type of DNA that is synthesized from a single-stranded RNA molecule through the process of reverse transcription. In this process, the enzyme reverse transcriptase uses an RNA molecule as a template to synthesize a complementary DNA strand. The resulting cDNA is therefore complementary to the original RNA molecule and is a copy of its coding sequence, but it does not contain non-coding regions such as introns that are present in genomic DNA.

Complementary DNA is often used in molecular biology research to study gene expression, protein function, and other genetic phenomena. For example, cDNA can be used to create cDNA libraries, which are collections of cloned cDNA fragments that represent the expressed genes in a particular cell type or tissue. These libraries can then be screened for specific genes or gene products of interest. Additionally, cDNA can be used to produce recombinant proteins in heterologous expression systems, allowing researchers to study the structure and function of proteins that may be difficult to express or purify from their native sources.

Phenoxybenzamine is an antihypertensive medication that belongs to a class of drugs known as non-selective alpha blockers. It works by blocking both alpha-1 and alpha-2 receptors, which results in the relaxation of smooth muscle tissue in blood vessel walls and other organs. This leads to a decrease in peripheral vascular resistance and a reduction in blood pressure.

Phenoxybenzamine is primarily used for the preoperative management of patients with pheochromocytoma, a rare tumor that produces excessive amounts of catecholamines, such as adrenaline and noradrenaline. By blocking alpha receptors, phenoxybenzamine prevents the hypertensive crisis that can occur during surgery to remove the tumor.

It's important to note that phenoxybenzamine has a long duration of action (up to 14 days) and can cause orthostatic hypotension, tachycardia, and other side effects. Therefore, it should be used with caution and under the close supervision of a healthcare professional.

The facial nerve, also known as the seventh cranial nerve (CN VII), is a mixed nerve that carries both sensory and motor fibers. Its functions include controlling the muscles involved in facial expressions, taste sensation from the anterior two-thirds of the tongue, and secretomotor function to the lacrimal and salivary glands.

The facial nerve originates from the brainstem and exits the skull through the internal acoustic meatus. It then passes through the facial canal in the temporal bone before branching out to innervate various structures of the face. The main branches of the facial nerve include:

1. Temporal branch: Innervates the frontalis, corrugator supercilii, and orbicularis oculi muscles responsible for eyebrow movements and eyelid closure.
2. Zygomatic branch: Supplies the muscles that elevate the upper lip and wrinkle the nose.
3. Buccal branch: Innervates the muscles of the cheek and lips, allowing for facial expressions such as smiling and puckering.
4. Mandibular branch: Controls the muscles responsible for lower lip movement and depressing the angle of the mouth.
5. Cervical branch: Innervates the platysma muscle in the neck, which helps to depress the lower jaw and wrinkle the skin of the neck.

Damage to the facial nerve can result in various symptoms, such as facial weakness or paralysis, loss of taste sensation, and dry eyes or mouth due to impaired secretion.

Insulin-like growth factor I (IGF-I) is a hormone that plays a crucial role in growth and development. It is a small protein with structural and functional similarity to insulin, hence the name "insulin-like." IGF-I is primarily produced in the liver under the regulation of growth hormone (GH).

IGF-I binds to its specific receptor, the IGF-1 receptor, which is widely expressed throughout the body. This binding activates a signaling cascade that promotes cell proliferation, differentiation, and survival. In addition, IGF-I has anabolic effects on various tissues, including muscle, bone, and cartilage, contributing to their growth and maintenance.

IGF-I is essential for normal growth during childhood and adolescence, and it continues to play a role in maintaining tissue homeostasis throughout adulthood. Abnormal levels of IGF-I have been associated with various medical conditions, such as growth disorders, diabetes, and certain types of cancer.

Chymotrypsin is a proteolytic enzyme, specifically a serine protease, that is produced in the pancreas and secreted into the small intestine as an inactive precursor called chymotrypsinogen. Once activated, chymotrypsin helps to digest proteins in food by breaking down specific peptide bonds in protein molecules. Its activity is based on the recognition of large hydrophobic side chains in amino acids like phenylalanine, tryptophan, and tyrosine. Chymotrypsin plays a crucial role in maintaining normal digestion and absorption processes in the human body.

Fibroblasts are specialized cells that play a critical role in the body's immune response and wound healing process. They are responsible for producing and maintaining the extracellular matrix (ECM), which is the non-cellular component present within all tissues and organs, providing structural support and biochemical signals for surrounding cells.

Fibroblasts produce various ECM proteins such as collagens, elastin, fibronectin, and laminins, forming a complex network of fibers that give tissues their strength and flexibility. They also help in the regulation of tissue homeostasis by controlling the turnover of ECM components through the process of remodeling.

In response to injury or infection, fibroblasts become activated and start to proliferate rapidly, migrating towards the site of damage. Here, they participate in the inflammatory response, releasing cytokines and chemokines that attract immune cells to the area. Additionally, they deposit new ECM components to help repair the damaged tissue and restore its functionality.

Dysregulation of fibroblast activity has been implicated in several pathological conditions, including fibrosis (excessive scarring), cancer (where they can contribute to tumor growth and progression), and autoimmune diseases (such as rheumatoid arthritis).

Repressor proteins are a type of regulatory protein in molecular biology that suppress the transcription of specific genes into messenger RNA (mRNA) by binding to DNA. They function as part of gene regulation processes, often working in conjunction with an operator region and a promoter region within the DNA molecule. Repressor proteins can be activated or deactivated by various signals, allowing for precise control over gene expression in response to changing cellular conditions.

There are two main types of repressor proteins:

1. DNA-binding repressors: These directly bind to specific DNA sequences (operator regions) near the target gene and prevent RNA polymerase from transcribing the gene into mRNA.
2. Allosteric repressors: These bind to effector molecules, which then cause a conformational change in the repressor protein, enabling it to bind to DNA and inhibit transcription.

Repressor proteins play crucial roles in various biological processes, such as development, metabolism, and stress response, by controlling gene expression patterns in cells.

Maltose-binding proteins (MBPs) are a type of protein that are capable of binding to maltose, a disaccharide made up of two glucose molecules. MBPs are found in many organisms, including bacteria and plants. In bacteria such as Escherichia coli, MBPs play a role in the transport and metabolism of maltose and maltodextrins, which are polymers of glucose.

MBPs are often used in laboratory research as model systems for studying protein folding and stability. They have a well-characterized three-dimensional structure and are relatively small, making them easy to produce and study. MBPs are also known for their high binding affinity and specificity for maltose, making them useful for purifying and detecting this sugar in various applications.

Polyglycolic acid (PGA) is a synthetic polymer of glycolic acid, which is commonly used in surgical sutures. It is a biodegradable material that degrades in the body through hydrolysis into glycolic acid, which can be metabolized and eliminated from the body. PGA sutures are often used for approximating tissue during surgical procedures due to their strength, handling properties, and predictable rate of absorption. The degradation time of PGA sutures is typically around 60-90 days, depending on factors such as the size and location of the suture.

Nucleoside diphosphate sugars (NDP-sugars) are essential activated sugars that play a crucial role in the biosynthesis of complex carbohydrates, such as glycoproteins and glycolipids. They consist of a sugar molecule linked to a nucleoside diphosphate, which is formed from a nucleotide by removal of one phosphate group.

NDP-sugars are created through the action of enzymes called nucleoside diphosphate sugars synthases or transferases, which transfer a sugar molecule from a donor to a nucleoside diphosphate, forming an NDP-sugar. The resulting NDP-sugar can then be used as a substrate for various glycosyltransferases that catalyze the addition of sugars to other molecules, such as proteins or lipids.

NDP-sugars are involved in many important biological processes, including cell signaling, protein targeting, and immune response. They also play a critical role in maintaining the structural integrity of cells and tissues.

A two-hybrid system technique is a type of genetic screening method used in molecular biology to identify protein-protein interactions within an organism, most commonly baker's yeast (Saccharomyces cerevisiae) or Escherichia coli. The name "two-hybrid" refers to the fact that two separate proteins are being examined for their ability to interact with each other.

The technique is based on the modular nature of transcription factors, which typically consist of two distinct domains: a DNA-binding domain (DBD) and an activation domain (AD). In a two-hybrid system, one protein of interest is fused to the DBD, while the second protein of interest is fused to the AD. If the two proteins interact, the DBD and AD are brought in close proximity, allowing for transcriptional activation of a reporter gene that is linked to a specific promoter sequence recognized by the DBD.

The main components of a two-hybrid system include:

1. Bait protein (fused to the DNA-binding domain)
2. Prey protein (fused to the activation domain)
3. Reporter gene (transcribed upon interaction between bait and prey proteins)
4. Promoter sequence (recognized by the DBD when brought in proximity due to interaction)

The two-hybrid system technique has several advantages, including:

1. Ability to screen large libraries of potential interacting partners
2. High sensitivity for detecting weak or transient interactions
3. Applicability to various organisms and protein types
4. Potential for high-throughput analysis

However, there are also limitations to the technique, such as false positives (interactions that do not occur in vivo) and false negatives (lack of detection of true interactions). Additionally, the fusion proteins may not always fold or localize correctly, leading to potential artifacts. Despite these limitations, two-hybrid system techniques remain a valuable tool for studying protein-protein interactions and have contributed significantly to our understanding of various cellular processes.

An epitope is a specific region on the surface of an antigen (a molecule that can trigger an immune response) that is recognized by an antibody, B-cell receptor, or T-cell receptor. It is also commonly referred to as an antigenic determinant. Epitopes are typically composed of linear amino acid sequences or conformational structures made up of discontinuous amino acids in the antigen. They play a crucial role in the immune system's ability to differentiate between self and non-self molecules, leading to the targeted destruction of foreign substances like viruses and bacteria. Understanding epitopes is essential for developing vaccines, diagnostic tests, and immunotherapies.

mRNA cleavage and polyadenylation factors are a group of proteins that play a crucial role in the post-transcriptional modification of messenger RNA (mRNA). This process involves two main steps: mRNA cleavage and polyadenylation.

1. Cleavage: During this step, the mRNA molecule is cut at a specific site, resulting in the formation of two separate fragments. The fragment that will become the mature mRNA is called the 3' untranslated region (3' UTR).

2. Polyadenylation: Following cleavage, a string of adenine nucleotides (poly(A) tail) is added to the 3' end of the newly formed 3' UTR. This poly(A) tail plays an essential role in mRNA stability, transport from the nucleus to the cytoplasm, and translation initiation.

mRNA cleavage and polyadenylation factors include various proteins that orchestrate these events, such as:

* Cleavage and polyadenylation specificity factor (CPSF) complex: This complex recognizes and binds to the polyadenylation signal sequence in the pre-mRNA. It contains several subunits, including CPSF1, CPSF2, CPSF3, CPSF4, and CPSF7.
* Cleavage stimulation factor (CstF) complex: This complex recognizes and binds to the GU-rich region downstream of the polyadenylation signal sequence. It contains several subunits, including CstF50, CstF64, CstF77, and CstF80.
* Cleavage factors I (CFIm) and II (CFIIm): These complexes help position the CPSF complex at the correct site for cleavage and polyadenylation. CFIm contains the subunits CFIm25, CFIm59, and CFIm68, while CFIIm consists of the subunits CLIP1 and PAP73.
* Poly(A) polymerase (PAP): This enzyme adds the string of adenine residues to the 3' end of the pre-mRNA after cleavage.

Together, these factors work together to ensure accurate and efficient cleavage and polyadenylation of pre-mRNAs during gene expression.

Synaptosomes are subcellular structures that can be isolated from the brain tissue. They are formed during the fractionation process of brain homogenates and consist of intact presynaptic terminals, including the synaptic vesicles, mitochondria, and cytoskeletal elements. Synaptosomes are often used in neuroscience research to study the biochemical properties and functions of neuronal synapses, such as neurotransmitter release, uptake, and metabolism.

Gene expression is the process by which the information encoded in a gene is used to synthesize a functional gene product, such as a protein or RNA molecule. This process involves several steps: transcription, RNA processing, and translation. During transcription, the genetic information in DNA is copied into a complementary RNA molecule, known as messenger RNA (mRNA). The mRNA then undergoes RNA processing, which includes adding a cap and tail to the mRNA and splicing out non-coding regions called introns. The resulting mature mRNA is then translated into a protein on ribosomes in the cytoplasm through the process of translation.

The regulation of gene expression is a complex and highly controlled process that allows cells to respond to changes in their environment, such as growth factors, hormones, and stress signals. This regulation can occur at various stages of gene expression, including transcriptional activation or repression, RNA processing, mRNA stability, and translation. Dysregulation of gene expression has been implicated in many diseases, including cancer, genetic disorders, and neurological conditions.

Denervation is a medical term that refers to the loss or removal of nerve supply to an organ or body part. This can occur as a result of surgical intervention, injury, or disease processes that damage the nerves leading to the affected area. The consequences of denervation depend on the specific organ or tissue involved, but generally, it can lead to changes in function, sensation, and muscle tone. For example, denervation of a skeletal muscle can cause weakness, atrophy, and altered reflexes. Similarly, denervation of an organ such as the heart can lead to abnormalities in heart rate and rhythm. In some cases, denervation may be intentional, such as during surgical procedures aimed at treating chronic pain or spasticity.

The brain is the central organ of the nervous system, responsible for receiving and processing sensory information, regulating vital functions, and controlling behavior, movement, and cognition. It is divided into several distinct regions, each with specific functions:

1. Cerebrum: The largest part of the brain, responsible for higher cognitive functions such as thinking, learning, memory, language, and perception. It is divided into two hemispheres, each controlling the opposite side of the body.
2. Cerebellum: Located at the back of the brain, it is responsible for coordinating muscle movements, maintaining balance, and fine-tuning motor skills.
3. Brainstem: Connects the cerebrum and cerebellum to the spinal cord, controlling vital functions such as breathing, heart rate, and blood pressure. It also serves as a relay center for sensory information and motor commands between the brain and the rest of the body.
4. Diencephalon: A region that includes the thalamus (a major sensory relay station) and hypothalamus (regulates hormones, temperature, hunger, thirst, and sleep).
5. Limbic system: A group of structures involved in emotional processing, memory formation, and motivation, including the hippocampus, amygdala, and cingulate gyrus.

The brain is composed of billions of interconnected neurons that communicate through electrical and chemical signals. It is protected by the skull and surrounded by three layers of membranes called meninges, as well as cerebrospinal fluid that provides cushioning and nutrients.

RNA stability refers to the duration that a ribonucleic acid (RNA) molecule remains intact and functional within a cell before it is degraded or broken down into its component nucleotides. Various factors can influence RNA stability, including:

1. Primary sequence: Certain sequences in the RNA molecule may be more susceptible to degradation by ribonucleases (RNases), enzymes that break down RNA.
2. Secondary structure: The formation of stable secondary structures, such as hairpins or stem-loop structures, can protect RNA from degradation.
3. Presence of RNA-binding proteins: Proteins that bind to RNA can either stabilize or destabilize the RNA molecule, depending on the type and location of the protein-RNA interaction.
4. Chemical modifications: Modifications to the RNA nucleotides, such as methylation, can increase RNA stability by preventing degradation.
5. Subcellular localization: The subcellular location of an RNA molecule can affect its stability, with some locations providing more protection from ribonucleases than others.
6. Cellular conditions: Changes in cellular conditions, such as pH or temperature, can also impact RNA stability.

Understanding RNA stability is important for understanding gene regulation and the function of non-coding RNAs, as well as for developing RNA-based therapeutic strategies.

Affinity chromatography is a type of chromatography technique used in biochemistry and molecular biology to separate and purify proteins based on their biological characteristics, such as their ability to bind specifically to certain ligands or molecules. This method utilizes a stationary phase that is coated with a specific ligand (e.g., an antibody, antigen, receptor, or enzyme) that selectively interacts with the target protein in a sample.

The process typically involves the following steps:

1. Preparation of the affinity chromatography column: The stationary phase, usually a solid matrix such as agarose beads or magnetic beads, is modified by covalently attaching the ligand to its surface.
2. Application of the sample: The protein mixture is applied to the top of the affinity chromatography column, allowing it to flow through the stationary phase under gravity or pressure.
3. Binding and washing: As the sample flows through the column, the target protein selectively binds to the ligand on the stationary phase, while other proteins and impurities pass through. The column is then washed with a suitable buffer to remove any unbound proteins and contaminants.
4. Elution of the bound protein: The target protein can be eluted from the column using various methods, such as changing the pH, ionic strength, or polarity of the buffer, or by introducing a competitive ligand that displaces the bound protein.
5. Collection and analysis: The eluted protein fraction is collected and analyzed for purity and identity, often through techniques like SDS-PAGE or mass spectrometry.

Affinity chromatography is a powerful tool in biochemistry and molecular biology due to its high selectivity and specificity, enabling the efficient isolation of target proteins from complex mixtures. However, it requires careful consideration of the binding affinity between the ligand and the protein, as well as optimization of the elution conditions to minimize potential damage or denaturation of the purified protein.

Sympathetic ganglia are part of the autonomic nervous system, which controls involuntary bodily functions. These ganglia are clusters of nerve cell bodies located outside the central nervous system, along the spinal cord. They serve as a relay station for signals sent from the central nervous system to the organs and glands. The sympathetic ganglia are responsible for the "fight or flight" response, releasing neurotransmitters such as norepinephrine that prepare the body for action in response to stress or danger.

Single-stranded DNA (ssDNA) is a form of DNA that consists of a single polynucleotide chain. In contrast, double-stranded DNA (dsDNA) consists of two complementary polynucleotide chains that are held together by hydrogen bonds.

In the double-helix structure of dsDNA, each nucleotide base on one strand pairs with a specific base on the other strand through hydrogen bonding: adenine (A) with thymine (T), and guanine (G) with cytosine (C). This base pairing provides stability to the double-stranded structure.

Single-stranded DNA, on the other hand, lacks this complementary base pairing and is therefore less stable than dsDNA. However, ssDNA can still form secondary structures through intrastrand base pairing, such as hairpin loops or cruciform structures.

Single-stranded DNA is found in various biological contexts, including viral genomes, transcription bubbles during gene expression, and in certain types of genetic recombination. It also plays a critical role in some laboratory techniques, such as polymerase chain reaction (PCR) and DNA sequencing.

Lipopolysaccharides (LPS) are large molecules found in the outer membrane of Gram-negative bacteria. They consist of a hydrophilic polysaccharide called the O-antigen, a core oligosaccharide, and a lipid portion known as Lipid A. The Lipid A component is responsible for the endotoxic activity of LPS, which can trigger a powerful immune response in animals, including humans. This response can lead to symptoms such as fever, inflammation, and septic shock, especially when large amounts of LPS are introduced into the bloodstream.

Protein transport, in the context of cellular biology, refers to the process by which proteins are actively moved from one location to another within or between cells. This is a crucial mechanism for maintaining proper cell function and regulation.

Intracellular protein transport involves the movement of proteins within a single cell. Proteins can be transported across membranes (such as the nuclear envelope, endoplasmic reticulum, Golgi apparatus, or plasma membrane) via specialized transport systems like vesicles and transport channels.

Intercellular protein transport refers to the movement of proteins from one cell to another, often facilitated by exocytosis (release of proteins in vesicles) and endocytosis (uptake of extracellular substances via membrane-bound vesicles). This is essential for communication between cells, immune response, and other physiological processes.

It's important to note that any disruption in protein transport can lead to various diseases, including neurological disorders, cancer, and metabolic conditions.

... (PAB or PABP) is an RNA-binding protein which triggers the binding of eukaryotic initiation factor 4 ... Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F. NSP3A by taking the ... This binding forms the characteristic loop structure of eukaryotic protein synthesis. Poly(A)-binding proteins in the cytosol ... poly(G), and poly(C) were reportedly lower or undetectable in comparison. This shows that the poly(A)-binding protein is ...
... is a protein that in humans is encoded by the PAIP2B gene. Most mRNAs, except ... "Entrez Gene: Poly(A) binding protein interacting protein 2B". Retrieved 2018-05-10. This article incorporates text from the ... Poly(A)-binding protein (PABP; see MIM 604679) enhances translation by circularizing mRNA through its interaction with the ... Various PABP-binding proteins regulate PABP activity, including PAIP1 (MIM 605184), a translational stimulator, and PAIP2A (MIM ...
Gherzi R, Lee KY, Briata P, Wegmüller D, Moroni C, Karin M, Chen CY (June 2004). "A KH domain RNA binding protein, KSRP, ... The amino acid sequence of poly(A)-specific ribonuclease shows homology to the RNase D family of 3'-exonucleases. The protein ... Körner CG, Wahle E (April 1997). "Poly(A) tail shortening by a mammalian poly(A)-specific 3'-exoribonuclease". The Journal of ... "AU binding proteins recruit the exosome to degrade ARE-containing mRNAs". Cell. 107 (4): 451-64. doi:10.1016/S0092-8674(01) ...
Ganji M, Docter M, Le Grice SF, Abbondanzieri EA (September 2016). "DNA binding proteins explore multiple local configurations ... X-ray diffraction of protein crystals can reveal the atomic structure of the proteins. PEG is used to fuse two different types ... Polyethylene oxide, or high-molecular-weight polyethylene glycol, is synthesized by suspension polymerization. It is necessary ... Polyethylene glycol, Chemindustry.ru "PEG 4000, 6000, 8000, 12000 , Polyethylene glycol". www.venus-goa.com. Retrieved 19 ...
Poly(A) binding protein cytoplasmic 5 is a protein that in humans is encoded by the PABPC5 gene. This gene encodes a poly(A)- ... "Entrez Gene: Poly(A) binding protein cytoplasmic 5". Retrieved 2020-04-16. v t e This article incorporates text from the United ... binding protein that binds to the polyA tail found at the 3' end of most eukaryotic mRNAs. It is thought to play a role in the ...
Poly(rC)-binding protein 4 is a protein that in humans is encoded by the PCBP4 gene. This gene encodes a member of the KH ... "Entrez Gene: PCBP4 poly(rC) binding protein 4". Taylor WR, Stark GR (2001). "Regulation of the G2/M transition by p53". ... Makeyev AV, Liebhaber SA (2002). "The poly(C)-binding proteins: a multiplicity of functions and a search for mechanisms". RNA. ... Proteins of this subfamily, also referred to as alpha-CPs, bind to RNA with a specificity for C-rich pyrimidine regions. Alpha- ...
"Entrez Gene: PCBP3 poly(rC) binding protein 3". Makeyev AV, Liebhaber SA (2002). "The poly(C)-binding proteins: a multiplicity ... Poly(rC)-binding protein 3 is a protein that in humans is encoded by the PCBP3 gene. This gene encodes a member of the KH ... Proteins of this subfamily, also referred to as alpha-CPs, bind to RNA with a specificity for C-rich pyrimidine regions. Alpha- ... 2006). "A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration". Cell. ...
Poly(rC)-binding protein 2 is a protein that in humans is encoded by the PCBP2 gene. The protein encoded by this gene appears ... Pickering BM, Mitchell SA, Evans JR, Willis AE (2003). "Polypyrimidine tract binding protein and poly r(C) binding protein 1 ... Blyn LB, Swiderek KM, Richards O, Stahl DC, Semler BL, Ehrenfeld E (1996). "Poly(rC) binding protein 2 binds to stem-loop IV of ... "Novel binding of HuR and poly(C)-binding protein to a conserved UC-rich motif within the 3'-untranslated region of the androgen ...
"Bioinformatic analysis of the nicotinamide binding site in poly(ADP-ribose) polymerase family proteins". Cancers. 13 (6): 1201 ... The DNA-binding region is capable of doing so independent of the rest of the protein, cleaved or not. It is unable, however, to ... Poly (ADP-ribose) polymerase (PARP) is a family of proteins involved in a number of cellular processes such as DNA repair, ... the DNA-binding domain will bind the DNA and induce a conformational shift. It has been shown that this binding occurs ...
"Entrez Gene: PABPC3 poly(A) binding protein, cytoplasmic 3". Marques AC, Dupanloup I, Vinckenbosch N, et al. (2006). "Emergence ... PABPC3 is a member of a larger family of poly(A)-binding proteins in the human genome. GRCh38: Ensembl release 89: ... Morris CM, Bodger MP (Mar 1993). "Localization of the human poly(A)-binding protein gene (PAB1) to chromosomal regions 3q22-q25 ... Feral C, Mattei MG, Pawlak A, Guellaen G (Nov 1999). "Chromosomal localization of three human poly(A)-binding protein genes and ...
Chen Z, Li Y, Krug RM (1999). "Influenza A virus NS1 protein targets poly(A)-binding protein II of the cellular 3'-end ... Polyadenylate-binding protein 2 (PABP-2) also known as polyadenylate-binding nuclear protein 1 (PABPN1) is a protein that in ... This gene encodes an abundant nuclear protein that binds with high affinity to nascent poly(A) tails. The protein is required ... At steady-state, this protein is localized in the nucleus whereas a different poly(A) binding protein is localized in the ...
... interacts with poly(A)-binding proteins (PABPs) to initiate translation. PABPs consequently bind to the poly(A) tails of target ... Goss DJ, Kleiman FE (March 2013). "Poly(A) binding proteins: are they all created equal?". Wiley Interdisciplinary Reviews: RNA ... The DAZ (Deleted in AZoospermia) protein family is a group of three highly conserved RNA-binding proteins that are important in ... DAZ protein family is one of the few examples of a tissue-specific RNA-binding protein that acts as a developmental regulator. ...
Poly(A) binding protein, cytoplasmic 4-like is a protein that in humans is encoded by the PABPC4L gene. GRCh38: Ensembl release ... "Entrez Gene: Poly(A) binding protein, cytoplasmic 4-like". Retrieved 2013-10-10. v t e (Articles with short description, Short ... description matches Wikidata, Genes on human chromosome 4, Genes, Human proteins, All stub articles, Human chromosome 4 gene ...
... nuclease complex stimulated by poly(A)-binding protein". J. Biol. Chem. 279 (2): 1383-91. doi:10.1074/jbc.M309125200. PMID ... PAN3 poly(A) specific ribonuclease subunit is a protein that in humans is encoded by the PAN3 gene. GRCh38: Ensembl release 89 ... "Entrez Gene: PAN3 poly(A) specific ribonuclease subunit". Retrieved 2016-09-27. Uchida N, Hoshino S, Katada T (2004). " ... "Identification of a human cytoplasmic poly(A) ...
The protein encoded by this gene interacts with poly(A)-binding protein and with the cap-binding complex eIF4A. It is involved ... "Entrez Gene: PAIP1 poly(A) binding protein interacting protein 1". Roy G, De Crescenzo G, Khaleghpour K, Kahvejian A, O'Connor- ... Polyadenylate-binding protein-interacting protein 1 is a protein that in humans is encoded by the PAIP1 gene. ... McCourt M, Sonenberg N (Jun 2002). "Paip1 interacts with poly(A) binding protein through two independent binding motifs". Mol. ...
Senataxin interacts with RNA polymerase II and poly(A) binding proteins. At the C-terminal, senataxin has a DEAD box helicase ... This gene encodes a protein named senataxin, a 302kDa protein There is high homology between human SETX and yeast Sen1. Sen1 in ... SETX encodes the senataxin protein that has a N-terminal that is likely to be involved with interacting with other proteins. ... The senataxin protein, which has RNA-DNA helicase activity, and DHX9 human helicase can resolve R-loops. This allows XRN2, an ...
Polyadenylate-binding protein 4 (PABPC4) is a protein that in humans is encoded by the PABPC4 gene. Poly(A)-binding proteins ( ... "Entrez Gene: PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form)". "Glucose tolerance test data for Pabpc4". ... Yang H, Duckett CS, Lindsten T (1996). "iPABP, an inducible poly(A)-binding protein detected in activated human T cells". Mol. ... Féral C, Mattéi MG, Pawlak A, Guellaën G (Nov 1999). "Chromosomal localization of three human poly(A)-binding protein genes and ...
Once eIF4F is bound to the mRNA this protein complex interacts with the poly(A) binding protein which is present within the 3′ ... Svitkin YV, Imataka H, Khaleghpour K, Kahvejian A, Liebig HD, Sonenberg N (December 2001). "Poly(A)-binding protein interaction ... Unlike RNA1, RNA2 encodes for a movement protein (MP) and the mRNA of RNA2 contains no structural elements within the UTRs that ... poly (A) tail. RNA1 is required in replication as it encodes for RNA replicase components. This RNA contains structural ...
3CD then interacts with another protein that binds the poly(A) tail. This circularizes the RNA and allows RNA polymerase to ... Excluding the poly-A tail, the genome of TrV is 9010 nucleotides long. With the poly-A tail, the genome is approximately 10 kb ... ORF 2 contains the sequences for four structural proteins VP1, VP2, VP3, and minor protein VP4 which will be the main ... end of the RNA genome is bound by the 3CD protein. 3CD functions as an RNA-dependent RNA-polymerase. ...
"Entrez Gene: PAIP2 poly(A) binding protein interacting protein 2". Khaleghpour K, Kahvejian A, De Crescenzo G, Roy G, Svitkin ... Onesto C, Berra E, Grépin R, Pagès G (2004). "Poly(A)-binding protein-interacting protein 2, a strong regulator of vascular ... Polyadenylate-binding protein-interacting protein 2 is a protein that in humans is encoded by the PAIP2 gene. PAIP2 has been ... Berlanga JJ, Baass A, Sonenberg N (Jul 2006). "Regulation of poly(A) binding protein function in translation: Characterization ...
Ahel I, Ahel D, Matsusaka T, Clark AJ, Pines J, Boulton SJ, West SC (January 2008). "Poly(ADP-ribose)-binding zinc finger ... Neuvonen M, Ahola T (January 2009). "Differential activities of cellular and viral macro domain proteins in binding of ADP- ... Binding to ADP-ribose can be either covalent or non-covalent: in certain cases it is believed to bind non-covalently, while in ... and is thus a high-affinity ADP-ribose-binding module found in a number of otherwise unrelated proteins. ADP-ribosylation of ...
Poly(A)-binding protein (PABP) has been shown to bind to BC200 RNA further confirming their role as regulators of protein ... The TATA-box binding protein (TBP) binds here, and when inhibited, BC200 RNA levels decrease, indicating that the 100 base pair ... However, transcription is not dependent on the TATA-box binding protein binding to the TATA-like sequence. Both upstream and ... "Poly(A)-binding protein is associated with neuronal BC1 and BC200 ribonucleoprotein particles". Journal of Molecular Biology. ...
"Bioinformatic analysis of the nicotinamide binding site in poly(ADP-ribose) polymerase family proteins". Cancers. 13 (6): 1201 ... 7-Methylguanine is a natural inhibitor of poly (ADP-ribose) polymerase (PARP) and tRNA guanine transglycosylase (TGT) - and ... "Inhibition of poly(ADP-ribose) polymerase by nucleic acid metabolite 7-methylguanine". Int. J. Mol. Sci. 21 (6): 2159. doi: ... "Inhibition of poly(ADP-ribose) polymerase by nucleic acid metabolite 7-methylguanine". Acta Naturae. 8 (2): 108-115. doi: ...
The poly(A) tail acts as the binding site for poly(A)-binding protein. Poly(A)-binding protein promotes export from the nucleus ... Poly(A)-binding protein also can bind to, and thus recruit, several proteins that affect translation, one of these is ... nuclease interacts with the C-terminal domain of polyadenylate-binding protein domain from poly(A)-binding protein". The ... This protein binds to the poly(A) tail prior to mRNA export from the nucleus and in yeast also recruits poly(A) nuclease, an ...
Poly(A)-binding protein interacting protein 2B, Paip2b, which represses mRNA translation, is mainly expressed in the oocytes ... binding protein partner Paip2a controls translation during late spermiogenesis in mice". Journal of Clinical Investigation. 120 ... UCSC genome browser v t e v t e (MicroRNA, Antisense RNA, All stub articles, Molecular and cellular biology stubs, Protein ... Paip2b is a PAIP2 family protein, with 3 amino acids longer than its homologous Paip2a. Yanagiya, Akiko; Delbes, Geraldine; ...
First, NSP3 ejects poly(A)-binding protein (PABP) from the translation initiation factor eIF4F. PABP is required for efficient ... At least six of the twelve proteins encoded by the rotavirus genome bind RNA. The role of these proteins in rotavirus ... NSP3 is bound to viral mRNAs in infected cells and it is responsible for the shutdown of cellular protein synthesis. NSP3 ... NSP6 is a nucleic acid binding protein and is encoded by gene 11 from an out-of-phase open reading frame. This table is based ...
... nuclease complex stimulated by poly(A)-binding protein". The Journal of Biological Chemistry. 279 (2): 1383-91. doi:10.1074/jbc ... PAB-dependent poly(A)-specific ribonuclease subunit 2 is an enzyme that in humans is encoded by the PAN2 gene. GRCh38: Ensembl ... Lo KW, Naisbitt S, Fan JS, Sheng M, Zhang M (April 2001). "The 8-kDa dynein light chain binds to its targets via a conserved (K ... X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Research. 5 (3): ...
Cosson B, Berkova N, Couturier A, Chabelskaya S, Philippe M, Zhouravleva G (Sep 2002). "Poly(A)-binding protein and eRF3 are ... Poly(A) tail of mRNA. Direct association of erf3/GSPT with polyadenylate-binding protein". The Journal of Biological Chemistry ... Tompkins V, Hagen J, Zediak VP, Quelle DE (Mar 2006). "Identification of novel ARF binding proteins by two-hybrid screening". ... "A human homologue of the yeast GST1 gene codes for a GTP-binding protein and is expressed in a proliferation-dependent manner ...
Eisermann, Kurtis; Dar, Javid A.; Dong, Jun; Wang, Dan; Masoodi, Khalid Z.; Wang, Zhou (2015). "Poly (A) Binding Protein ...
Pegylation is the process of covalently binding polyethylene glycol (PEG) to proteins. Pegylation prolongs the half-life of the ... Gold-bound tumor necrosis factor (TNF) is in phase I trials for treatment of solid tumors. The trial found that gold-bound TNF ... Binding studies suggest GAGs have a natural affinity for cytokines, and cytokine binding to GAGs is mediated by nonspecific ... are mutated cytokines that have reduced binding affinity for their native receptor complex and enhanced binding affinity for a ...
Poly(A)-binding protein (PAB or PABP) is an RNA-binding protein which triggers the binding of eukaryotic initiation factor 4 ... Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F. NSP3A by taking the ... This binding forms the characteristic loop structure of eukaryotic protein synthesis. Poly(A)-binding proteins in the cytosol ... poly(G), and poly(C) were reportedly lower or undetectable in comparison. This shows that the poly(A)-binding protein is ...
PCBP2 poly(rC) binding protein 2 [Homo sapiens] PCBP2 poly(rC) binding protein 2 [Homo sapiens]. Gene ID:5094 ... Advances in poly(rC)-binding protein 2: Structure, molecular function, and roles in cancer. Title: Advances in poly(rC)-binding ... poly(rC)-binding protein 2. Names. alpha-CP2. epididymis secretory sperm binding protein. heterogeneous nuclear ... RNA-binding domain found in poly(rC)-binding protein 1 (PCBP1) and similar proteins. cd22518. Location:92 → 169. KH-I_PCBP1_2_ ...
A poly(A) binding protein that is involved in promoting the extension of the poly A tails of MRNA. The protein requires a ... Binding Protein II" by people in Profiles.. * The poly(A) binding protein is internalized in virus-induced vesicles or ... Binding Protein II" by people in Harvard Catalyst Profiles by year, and whether "Poly(A)-Binding Protein II" was a major or ... The nuclear poly(A) binding protein, PABP2, forms an oligomeric particle covering the length of the poly(A) tail. J Mol Biol. ...
Poly(A)-Binding Proteins. Poly(A)-Binding Protein I. Poly(A)-Binding Protein II ...
... Giamblanco N;MARLETTA ... and compare their protein responses. The functionalized copolymers consist in alternating poly(ethylene glycol) (PEG) chains ... and compare their protein responses. The functionalized copolymers consist in alternating poly(ethylene glycol) (PEG) chains ... In this study, we address the issue of the interactions of plasma proteins with polymer coated surfaces. To this aim, we use a ...
Inhibition of host poly(A)-binding protein by virus (kw:KW-1101). Poly(A) binding protein (PABPC1) normally stimulates mRNA ... The interaction between PABPC1 and eIF4G forms a protein bridge between 5- and 3-ends, enhancing cap binding by eIF4E and RNA ... Preventing the expression of host proteins is also a strategy to counteract the antiviral response. Viral inhibition can be ... Inhibiting host translation eventually leads to shutoff of host proteins expression and gives viruses transcripts a competitive ...
The wheat poly(A)-binding protein functionally complements pab1 in yeast.. Title. The wheat poly(A)-binding protein ... Plant Proteins, Poly(A)-Binding Proteins, RNA-Binding Proteins, Saccharomyces cerevisiae, Sequence Alignment, Sequence Homology ... Poly(A)-binding protein (PAB) binds to the poly(A) tail of most eukaryotic mRNAs and influences its translational efficiency as ... The wheat poly(A)-binding protein functionally complements pab1 in yeast.. ...
SRY protein, human * Sex-Determining Region Y Protein * Transcription Factors * Poly A ... A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif Nature. 1990 Jul ... fission yeast Schizosaccharomyces pombe and a conserved DNA-binding motif present in the nuclear high-mobility-group proteins ... It shares homology with the mating-type protein, Mc, from the ... Fungal Proteins / genetics * High Mobility Group Proteins / ...
Poly(ADP-ribose) polymerase-1 (PARP-1) facilitates local chromatin relaxation and the recruitment of DNA repair factors at ... Reprogramming cellular events by poly(ADP-ribose)-binding proteins. Mol. Aspects Med. 34, 1066-1087 (2013). ... Second, we measured the accumulation of replication protein A (RPA). RPA is an essential trimeric protein complex that binds to ... giving rise to poly(ADP-ribose) (PAR), onto itself or a variety of target proteins. Protein ADP-ribosylation permits the ...
Poly(A) Binding Protein 1 Enhances Cap-Independent Translation Initiation of Neurovirulence Factor from Avian Herpesvirus ... Poly(A) Binding Protein 1 Enhances Cap-Independent Translation Initiation of Neurovirulence Factor from Avian Herpesvirus ...
Selection and cloning of poly (rC)-binding protein 2 and Raf kinase inhibitor protein RNA activators of 2′, 5′-oligoadenylate ...
UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos ... Dive into the research topics of UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled ...
Moreover, poly(ADP-ribosyl)ation on the chromosomal insulator protein CTCF (CCCTC-binding factor) may be involved in epigenetic ... genes, which encode mitochondria-localizing poly(ADP-ribose) (PAR) degrading enzyme [42] and an anti-viral RNA-binding protein ... The regulation of TFs and nucleotide binding proteins by poly(ADP-ribosyl)ation. PARP inhibitors, such as talazoparib, ... Thus, the alteration of the profile of the GGAA-motif-binding proteins or their associated protein factors may allow for the ...
PABPN1: poly(A) binding protein nuclear 1. *PACS1: phosphofurin acidic cluster sorting protein 1 ... PRKAG2: protein kinase AMP-activated non-catalytic subunit gamma 2. *PRKAR1A: protein kinase cAMP-dependent type I regulatory ...
... influences the expression pattern of protein-coding genes. The purpose of this study was to determine the mRNA levels in the ... Rbs1 is a poly(A) mRNA-binding protein. Mutational analysis indicated that the R3H domain is required for mRNA interactions [2 ... The binding of Rbs1 to the 3′-untranslated region (UTR) in RPB10 mRNA leads to an increase in the synthesis of Rpb10 protein, ... The RBS1 gene encodes the RNA-binding protein, which stimulates Pol III biogenesis; whereas the product of the PRT1 gene is a ...
Biochemical reconstitution of deadenylation and analysis of binding kinetics reveals how RNA-binding proteins select their mRNA ... Poly(A)-binding protein (Pab1) contributes to translation initiation, and its release from mRNAs can repress translation ( ... A) RNA-binding proteins (RBPs) promote targeted deadenylation by simultaneously binding to RNA via an RNA-binding domain (RBD) ... Identification of mRNA targets of RNA-binding proteins. Even when the consensus motif recognized by an RNA-binding protein is ...
The structure of the macroH2A1.1 macrodomain in complex with ADP-ribose establishes a poly-ADP-ribose cap-binding function and ... Now macrodomain-containing proteins are shown to rapidly move to PARP1 activation sites, and recruitment of the macrodomain- ... which is deficient in poly-ADP-ribose binding, does not mediate chromatin rearrangements upon PARP1 activation. ... Poly-ADP-ribosylation is a post-translational modification catalyzed by PARP enzymes with roles in transcription and chromatin ...
Name: poly(rC) binding protein 3. Synonyms: AlphaCP-3. Type: Gene. Species: Mus musculus (mouse) ... Name: Tax1 (human T cell leukemia virus type I) binding protein 3 ... Name: CDC42 binding protein kinase alpha. Synonyms: DMPK-like, ...
Engineering human liver fatty acid binding protein for detection of poly- and perfluoroalkyl substances. Mann MM, Tang JD, ... Understanding how transmembrane domains regulate interactions between human BST-2 and the SARS-CoV-2 accessory protein ORF7a. ...
Poly(ADP-ribose)-binding protein RCD1 is a plant PARylation reader regulated by Photoregulatory Protein Kinases. Vainonen, J. P ... Stomatal CO2/bicarbonate sensor consists of two interacting protein kinases, Raf-like HT1 and nonkinase-activity activity ...
In addition, after transcription, a wide array of RNA-binding proteins interacts with cis-acting elements located mainly in the ... In addition, after transcription, a wide array of RNA-binding proteins interacts with cis-acting elements located mainly in the ... mRNA via interaction with AU-rich element RNA-binding protein 1 (AUF1) and poly A binding protein (PABP). Gene 1, 18. doi: ... poly-A polymerase-binding nuclear protein) is another critical piece of PAP activity. This protein stimulates the reaction of ...
Poly(rC) binding protein 1, hnRNP-E1, hnRNP-X, HNRPE1, HNRPX, Alpha-CP1, Heterogeneous nuclear ribonucleoprotein E1, Nucleic ... acid-binding protein SUB2.3, PCBP1.. Introduction. PCBP1 is a single-stranded nucleic acid binding protein that binds ... PCBP1 along with PCBP-2 and hnRNPK corresponds to the major cellular poly(rC)-binding protein. PCBP1 and PCBP-2 also functions ... For long term storage it is recommended to add a carrier protein (0.1% HSA or BSA).. Avoid multiple freeze-thaw cycles. ...
Poly(A)-binding proteins (PABPs) play roles in mRNA maturation, translational activity, and decay. The functions of PABPs, ...
Proteome-wide identification of poly(ADP-ribose) binding proteins and poly(ADP-ribose)-associated protein complexes. Nucleic ... Reprogramming cellular events by poly(ADP-ribose)-binding proteins. Molecular Aspects of Medicine. 34: 1066-87. PMID 23268355 ... Poly(ADP-ribose) (PAR) binding to apoptosis-inducing factor is critical for PAR polymerase-1-dependent cell death (parthanatos ... Poly(ADP-ribose) promotes toxicity of arginine-rich dipeptide repeat proteins. Science Translational Medicine. 14: eabq3215. ...
CREB binding protein interacts with nucleoporin-specific FG repeats that activate transcription and mediate NUP98-HOXA9 ... Nuclear export assays for poly(A) RNAs. Chakraborty, P., Satterly, N., Fontoura, B.M. Methods (2006) [Pubmed] ... VSV M protein binds the mRNA export factor Rae1 that is in complex with Nup98, resulting in nuclear retention of mRNAs [21]. ... Karyopherin beta2 mediates nuclear import of a mRNA binding protein. Bonifaci, N., Moroianu, J., Radu, A., Blobel, G. Proc. ...
This pathway involves the poly(A) binding protein PABPN1, the poly(A) polymerase PAP and the nuclear exosome complex. However, ... Li, S.; Liu, K.; Zhang, S.; Wang, X.; Rogers, K.; Ren, G.; Zhang, C.; Yu, B. STV1, a ribosomal protein, binds primary microRNA ... For instance, the protein Ars2 (Arsenite resistance protein 2) is necessary for the stability of a subset of pri-miRNAs in ... Interestingly, STV1, a conserved ribosomal protein, binds pri-miRNAs to promote their interaction with the processing complex ...
Poly(ADP-ribose) polymerase (PARP) inhibitors bind to nuclear PARP and trap the protein-inhibitor complex to DNA. This work ... Results: The maximum specific binding (Bmax), equilibrium dissociation constant (Kd), and nonspecific binding slope (NS) were ... Upregulation of Poly (ADP-Ribose) Polymerase-1 (PARP1) in Triple-Negative Breast Cancer and Other Primary Human Tumor Types ... Poly (ADP-ribose) polymerase (PARP) is a family of enzymes involved in DNA damage response. In this study, we looked for ...
A conserved motif in human BTG1 and BTG2 proteins mediates interaction with the poly(A) binding protein PABPC1 to stimulate ... The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions. * Fabienne Mauxion ... The latter process relies on specific marks to be efficient, namely the 5 mRNA cap and the 3 poly(A) tail. These ... Crystal structure of U2 snRNP SF3b components: Hsh49p in complex with Cus1p-binding domain. * A van Roon ...
Identification and characterization of proteins that interact with the carboxy terminus of poly(A) binding protein and inhibit ... Interaction between zucchini yellow mosaic potyvirus RNA-dependent RNA polymerase and host poly-(A)- binding protein. Virology ... Effect of substitution of the amino terminus of coat proteins of distinct potyvirus species on viral infectivity and host ... Localization of zucchini yellow mosaic virus to the veinal regions and role of viral coat protein in veinal chlorosis ...
  • Rotavirus mRNAs terminate a 3' GACC motif that is recognized by the viral protein NSP3. (wikipedia.org)
  • Poly(A)-binding protein (PABP) is a key player in mRNA circularization and translation initiation of polyadenylated mRNAs. (microbiologyresearch.org)
  • Non-Structural Protein 1 (NS1) is an IAV protein that is known to stimulate the translation of viral mRNAs in order to efficiently produce new virions. (escholarship.org)
  • Chapter 4 examines the binding of NS1 with longer, viral and non-viral mRNAs using filter binding to better understand the interactions with more representative RNAs. (escholarship.org)
  • Interestingly, data using both fluorescence anisotropy and filter binding assays show that NS1 does not preferentially bind to viral mRNAs. (escholarship.org)
  • The PABPN1 protein plays an important role in processing molecules called messenger RNAs (mRNAs), which serve as genetic blueprints for making proteins. (medlineplus.gov)
  • These proteins are associated with pre-mRNAs in the nucleus and appear to influence pre-mRNA processing and other aspects of mRNA metabolism and transport. (nih.gov)
  • Of interest is the human La antigen and La-related protein-4 (LARP4) in their ability to accommodate specific binding to precursor-tRNAs and mRNAs and influence their 3' end metabolism in the nucleus and cytoplasm respectively. (nih.gov)
  • Some mRNAs are transported to a specific location as directed by their zip-code sequences before starting protein production and remain translationally inactive until they reach their target location. (jove.com)
  • The mRNAs are then trapped by anchor proteins, which help them to remain at a specified location. (jove.com)
  • Selected mRNAs and their bound proteins are passed from stress granules (SGs) to processing bodies (PBs), according to evidence presented by Kedersha et al. (rupress.org)
  • Finally, analyses of both bulk poly(A) tails and specific endogenous transcripts reveals that a subset of nuclear RNAs are hyperadenylated in a PABPN1-dependent fashion, and this hyperadenylation can be either uncoupled or coupled with decay. (nih.gov)
  • The PABP-specific translation inhibitor PABP-interacting protein 2 (Paip2) interferes with the DENV 3′UTR-PABP interaction, and in vitro translation of DENV reporter RNAs in baby hamster kidney cell extracts is inhibited by Paip2 in a dose-dependent manner. (microbiologyresearch.org)
  • Although NS1 does not preferentially bind to viral mRNA, the binding to RNAs may still affect NS1's interaction with PABP1. (escholarship.org)
  • The protein encoded by this gene is located in the nucleoplasm and has three repeats of KH domains that binds to RNAs. (nih.gov)
  • Genome-wide sequencing approaches have lead to the discovery of non-coding RNAs (ncRNAs), which account for approximately 98% of the entire genome output, compared to the remaining 2% corresponding to protein-coding transcripts ( 14 ). (frontiersin.org)
  • Poly(A)-binding protein (PAB or PABP) is an RNA-binding protein which triggers the binding of eukaryotic initiation factor 4 complex (eIF4G) directly to the poly(A) tail of mRNA which is 200-250 nucleotides long. (wikipedia.org)
  • This domain does not contact RNA, and instead, it recognizes 15 residues sequences that are a part of the PABP interaction motif (PAM-2) found on such proteins as eukaryotic translation termination factor (eRF3) and PABP interacting proteins 1 and 2 (PAIP 1, PAIP2). (wikipedia.org)
  • The expression of mammalian poly(A)-binding protein is regulated at the translational level by a feed-back mechanism: the mRNA encoding PABP contains in its 5' UTR an A-rich sequence which binds poly(A)-binding protein. (wikipedia.org)
  • NSP3A by taking the place of PABP on eIF4GI, is responsible for the shut-off of cellular protein synthesis. (wikipedia.org)
  • Here, we report the binding of PABP to the non-polyadenylated 3′end of dengue virus (DENV) RNA. (microbiologyresearch.org)
  • PABP binds the DENV 3′ untranslated region (3′UTR) internally, upstream of the conserved 3′stem-loop near the two dumb-bell structures, and can be displaced by poly(A) RNA. (microbiologyresearch.org)
  • Our findings show an expanded translation mechanism for PABP, binding to a viral RNA lacking a terminal poly(A) tail. (microbiologyresearch.org)
  • 15. Poly(A) binding protein (PABP) homeostasis is mediated by the stability of its inhibitor, Paip2. (nih.gov)
  • Other interests include mRNA metabolism involving LARP4 and its relationship to poly(A) binding protein (PABP) and mRNA poly(A) tail (PAT) homeostasis. (nih.gov)
  • We test rosetta with a small 61 aminoacid protein (1I2T, Poly-A binding protein, PABP). (sbgrid.org)
  • The poly(A) tail is located on the 3' end of mRNA and was discovered by Mary Edmonds, who also characterized the poly-A polymerase enzyme that generates the poly(a) tail. (wikipedia.org)
  • The binding protein is also involved in mRNA precursors by helping polyadenylate polymerase add the poly(A) nucleotide tail to the pre-mRNA before translation. (wikipedia.org)
  • The nuclear isoform selectively binds to around 50 nucleotides and stimulates the activity of polyadenylate polymerase by increasing its affinity towards RNA. (wikipedia.org)
  • Once bound it works in conjunction with CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR to stimulate the rate of poly A synthesis by POLY A POLYMERASE. (musc.edu)
  • Inhibition of DNA binding by the phosphorylation of poly ADP-ribose polymerase protein catalysed by protein kinase C. Biochem Biophys Res Commun 187 , 730-736. (nih.gov)
  • Role of protein-protein interactions in the function of replication protein A (RPA): RPA modulates the activity of DNA polymerase alpha by multiple mechanisms. (nih.gov)
  • The researchers investigated whether NAD + levels can affect DNA repair through poly (ADP-ribose) polymerase 1 (PARP1). (nih.gov)
  • This binding forms the characteristic loop structure of eukaryotic protein synthesis. (wikipedia.org)
  • Interaction between the cellular protein eEF1A and the 3′-terminal stem-loop of West Nile virus genomic RNA facilitates viral minus-strand RNA synthesis. (microbiologyresearch.org)
  • Campbell along with other researchers believed that pain could be blocked by interrupting the pain-protein synthesis that is coded in mRNA facilitates within the genome. (ajmc.com)
  • We're manipulating one step of protein synthesis," Campbell explained. (ajmc.com)
  • Transcription termination by pol III is linked to posttranscriptional RNA processing because the mechanism of termination leads to synthesis of 3' oligo-U tracts on nascent transcripts, which serve as a sequence-specific binding site for the La protein. (nih.gov)
  • If the synthesized protein is a cell surface or secreted protein, its target peptide sequence will be recognized, and the whole complex of the mRNA, ribosome, and newly synthesized peptide will be transferred to the surface of the endoplasmic reticulum for further synthesis. (jove.com)
  • an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. (jove.com)
  • Poly(ADP-ribose) polymerases (PARPs) catalyze the synthesis of poly(ADP-ribose) (PAR) as a posttranslational modification. (peerj.com)
  • When complexed with RNA the proteins serve an array of functions such as stabilizing the 3' end of RNA , promoting poly(A) synthesis and stimulating mRNA translation. (bvsalud.org)
  • In order to determine whether NS1 preferentially binds to the 5'-UTR of viral genes, several short RNA substrates from viral and non-viral sequences were tested using anisotropy as presented in chapter 3. (escholarship.org)
  • One basic problem is how a decrease in tRNA levels, by downregulating Pol III efficiency, influences the expression pattern of protein-coding genes. (mdpi.com)
  • Evolutionary studies have demonstrated that the increase in organisms complexity corresponds to a decrease in the abundance of protein-coding genes and a concomitant rise in the number of ncRNAs, indicating that regulatory RNA diversification has been critical to increase vertebrate complexity ( 15 , 16 ). (frontiersin.org)
  • In this study, we uncover a mammalian RNA decay pathway that depends on the nuclear poly(A)-binding protein (PABPN1), the poly(A) polymerases (PAPs), PAPα and PAPγ, and the exosome subunits RRP6 and DIS3. (nih.gov)
  • The nuclear poly(A)-binding protein 1 (PABPN1) is a ubiquitously expressed protein that plays a critical role in polyadenylation. (unesp.br)
  • In addition, PABPN1 depletion caused nuclear accumulation of poly(A) RNA, revealing that PABPN1 is required for proper poly(A) RNA export from the nucleus. (unesp.br)
  • Bresson, SM & Conrad, NK 2013, ' The Human Nuclear Poly(A)-Binding Protein Promotes RNA Hyperadenylation and Decay ', PLoS genetics , vol. 9, no. 10, e1003893. (elsevierpure.com)
  • The hnRNPs are RNA binding proteins and they complex with heterogeneous nuclear RNA (hnRNA). (nih.gov)
  • Ionized silver is highly active, as it binds to tissue proteins and brings structural changes to the bacterial cell wall and nuclear membrane leading to cell distortion and death. (nature.com)
  • The trans -acting elements include mRNA binding proteins that recognize specific sequences or structures formed by the mRNA and, together with RNA, form heterogeneous nuclear ribonucleoprotein particles. (jove.com)
  • mRNA in these particles is then exported through nuclear pore complexes with the help of exporter proteins that associate with both the mRNA and the nuclear pore complexes. (jove.com)
  • For example, mRNA is exported through the nuclear pore complexes with the help of an exporter protein, which is a heterodimer of nuclear export factor 1 and nuclear export transporter 1. (jove.com)
  • Deleting the C-terminal 233 amino acids of SMG abrogates F-box protein interaction and confers immunity to degradation. (bvsalud.org)
  • The iron chaperone poly C binding protein 1 regulates iron efflux through intestinal ferroportin in mice. (nih.gov)
  • Poly(rC)-Binding Protein 2 Regulates Hippo Signaling To Control Growth in Breast Epithelial Cells. (nih.gov)
  • 4. Alpha4 is a ubiquitin-binding protein that regulates protein serine/threonine phosphatase 2A ubiquitination. (nih.gov)
  • 2017. Cytoplasmic poly (A) binding protein (PABPC2) critically regulates epidermal maintenance and turnover in planarian Schmidtea mediterranea. . (ncbs.res.in)
  • A conserved NAD + binding pocket that regulates protein-protein interactions during aging. (nih.gov)
  • mRNA polyadenylate-binding protein: gene isolation and sequencing and identification of a ribonucleoprotein consensus sequence. (microbiologyresearch.org)
  • A lower affinity to cytosolic proteins reveals VDAC3 isoform-specific role in mitochondrial biology. (nih.gov)
  • The poly(A)-binding protein may also protect the tail from degradation and regulate mRNA production. (wikipedia.org)
  • In conclusion, this study revealed a novel mechanism that KIF15 enhances LMS cell proliferation via preventing DEK protein from degradation by increasing USP15 mediated deubiquitylation. (nih.gov)
  • 1. Progestin-inducible EDD E3 ubiquitin ligase binds to α4 phosphoprotein to regulate ubiquitination and degradation of protein phosphatase PP2Ac. (nih.gov)
  • 3. The E3 ubiquitin ligase- and protein phosphatase 2A (PP2A)-binding domains of the Alpha4 protein are both required for Alpha4 to inhibit PP2A degradation. (nih.gov)
  • 14. Protein Phosphatase Methyl-Esterase PME-1 Protects Protein Phosphatase 2A from Ubiquitin/Proteasome Degradation. (nih.gov)
  • Without these two proteins in-tandem, then the poly(A) tail would not be added and the RNA would degrade quickly. (wikipedia.org)
  • Poly(A) tail extension appears to be necessary for decay, as cordycepin treatment or point mutations in the PAP-stimulating domain of PABPN1 leads to the accumulation of stable transcripts with shorter poly(A) tails than controls. (nih.gov)
  • It simultaneously binds the 3′ poly(A) tail of an mRNA and eukaryotic initiation factor 4G (eIF4G), which forms part of the translation initiation complex assembling at the 5′end, thus circularizing the RNA molecule and enhancing translation initiation. (microbiologyresearch.org)
  • Although significant data from in vitro biochemical assays define the function of PABPN1 in control of poly(A) tail length, little is known about the role of PABPN1 in mammalian cells. (unesp.br)
  • The PABPN1 protein attaches (binds) to the end of an mRNA molecule at a region called the polyadenine tail or poly(A) tail. (medlineplus.gov)
  • The PABPN1 protein helps add adenines to the poly(A) tail through a process called polyadenylation. (medlineplus.gov)
  • Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. (jove.com)
  • Since the two central β-strands are used for poly(A) oligonucleotide binding, the other face of the protein is free for protein-protein interactions. (wikipedia.org)
  • Likewise, we determined the X-ray crystal structures of caspases-3, -7, and -8 in complex with our lead peptide inhibitor to elucidate the binding mechanism and active site interactions that promote the selective recognition of caspase-3 over other highly homologous caspase family members. (proteopedia.org)
  • To the best of our knowledge, this is the first attempt to create a chemically stabilized mimic to competitively inhibit RNA to disrupt RNA-protein interactions," he said. (ajmc.com)
  • Expression of the SG protein TTP, which promotes mRNA decay, strengthened their interactions. (rupress.org)
  • Exposure to allergens prompts the immune system to make IgE antibodies that bind to that allergen. (nih.gov)
  • IgE antibodies also bind to the surfaces of immune cells known as mast cells. (nih.gov)
  • One targeted a protein on mast cells that normally engages IgE antibodies to activate the mast cell. (nih.gov)
  • They faced an important challenge: Antibodies are proteins, and protein structures and activities are often altered when they attach to nanoparticles. (nih.gov)
  • These secondary polyclonal antibodies bind both heavy and light chain to mouse IgG 1 , IgG 2a and IgG 2b . (thermofisher.com)
  • The size of the beads (2.8 μm) makes them particularly suitable for isolation of antibodies (Ab) and their target proteins. (thermofisher.com)
  • Cleaves and activates sterol regulatory element binding proteins (SREBPs). (proteopedia.org)
  • 8. Overexpression of the mTOR alpha4 phosphoprotein activates protein phosphatase 2A and increases Stat1alpha binding to PIAS1. (nih.gov)
  • Ataxia telangiectasia mutant protein activates c-Abl tyrosine kinase in response to ionizing radiation. (nih.gov)
  • Design of a synthetic Mdm2-binding mini-protein that activates the p53 response in vivo. (nih.gov)
  • In vitro studies have shown the binding affinities to be on the order of 2-7nM, while affinity for poly(U), poly(G), and poly(C) were reportedly lower or undetectable in comparison. (wikipedia.org)
  • This interaction enhances both the affinity of eIF4E for the cap structure and PABP1 for poly(A), effectively locking proteins onto both ends of the mRNA. (wikipedia.org)
  • Dynabeads® M-280 Sheep anti-Mouse IgG are uniform, superparamagnetic, polystyrene beads with affinity purified sheep anti-mouse IgG covalently bound to the bead surface. (thermofisher.com)
  • Alternatively, an indirect approach can be of benefit when the concentration of antibody is low, the antibody-antigen affinity is weak or the binding kinetics is slow. (thermofisher.com)
  • The identity of the PARylated proteins was tested by affinity precipitation with PAR-binding reagent followed by western blots. (peerj.com)
  • The protein responsible for the repeating structure of cytoplasmic poly(A)-ribonucleoprotein. (microbiologyresearch.org)
  • The cytoplasmic poly(A) binding protein (PABPC) has a minor inhibitory effect on Smaug-dependent deadenylation. (bvsalud.org)
  • Although SPR is extensively utilized in interaction studies, recent research of protein or cell adsorption on hydroxyapatite coatings for prostheses applications was not found. (mdpi.com)
  • 13. NMR studies of the C-terminus of alpha4 reveal possible mechanism of its interaction with MID1 and protein phosphatase 2A. (nih.gov)
  • Interaction between replication protein A and p53 is disrupted after UV damage in a DNA repair-dependent manner. (nih.gov)
  • Single-stranded-DNA binding alters human replication protein A structure and facilitates interaction with DNA-dependent protein kinase. (nih.gov)
  • I use biochemical and proteomics methods to elucidate the role of proteins involved in plant stresss response and characterise their interaction networks. (helsinki.fi)
  • Cytosolic poly-A binding protein (PABPC) is made up of four RNA recognition motifs (RRMs) and a C-terminal region known as the PABC domain. (wikipedia.org)
  • The overwhelming majority of full-length and truncated elements (82/86 and 40/49, respectively) contained one or two specific motifs required for binding of the VL30 RNA to the poly-pyrimidine tract-binding protein-associated splicing factor (PSF). (mendeley.com)
  • Two of these sites, FP3 (bases −7738 to −7715) and FP4 (bases −7698 to −7682), overlapped binding motifs for the orphan human pregnane X receptor (hPXR). (aspetjournals.org)
  • We wondered which PARP synthesizes the belt and which is the PARylation target protein. (peerj.com)
  • At the molecular level, PABPN1 depletion in myoblasts led to a shortening of mRNA poly(A) tails, demonstrating the cellular function of PABPN1 in polyadenylation control in a mammalian cell. (unesp.br)
  • Cytosolic iron chaperones: Proteins delivering iron cofactors in the cytosol of mammalian cells. (nih.gov)
  • These proteins recognize specific nucleotide sequences or stem-loop structures formed by the mRNA and can bind different types of mRNA with similar binding features. (jove.com)
  • The cytosolic isoform of eukaryotic poly(A)-binding protein binds to the initiation factor eIF4G via its C-terminal domain. (wikipedia.org)
  • eIF4G is a component of the eIF4F complex, containing eIF4E, another initiation factor bound to the 5' cap on the 5' end of mRNA. (wikipedia.org)
  • Poly(A)-binding proteins in the cytosol compete for the eIF4G binding sites. (wikipedia.org)
  • This is the location where NSP3 competes with poly(A)-binding protein for eIF4G binding. (wikipedia.org)
  • Previous studies have indicated that NS1 binds to the unique 5'-UTRs of viral mRNA and recruits PABP1 and eIF4G proteins, which leads to viral protein production. (escholarship.org)
  • The iron chaperone and nucleic acid-binding activities of poly(rC)-binding protein 1 are separable and independently essential. (nih.gov)
  • The hnRNP proteins have distinct nucleic acid binding properties. (nih.gov)
  • By showing that a DNA-protein complex can slide along another DNA molecule to search for a target, these results could lead to new insights into other systems in which it is necessary for protein-nucleic acid complexes to locate a particular sequence of bases. (elifesciences.org)
  • Rotavirus RNA-binding protein NSP3 interacts with eIF4GI and evicts the poly(A) binding protein from eIF4F. (wikipedia.org)
  • 2. alpha4 phosphoprotein interacts with EDD E3 ubiquitin ligase and poly(A)-binding protein. (nih.gov)
  • Other proteins are found only at SGs, such as eIF3 and poly(A)-binding proteins, or only at PBs, such as decapping enzymes. (rupress.org)
  • An antimicrobial nano-silver non-woven polyethylene terephthalate (PET) fabric has been prepared in a three step process. (nature.com)
  • Non-woven polyethylene terephthalate (PET) has been used in a wide range of applications due to its outstanding characteristics such as excellent mechanical strength and good chemical stability. (nature.com)
  • The protein requires a minimum of ten ADENOSINE nucleotides in order for binding to mRNA. (musc.edu)
  • Once poly-A tails reach around 250 nucleotides in length poly(A) binding protein II no longer stimulates POLYADENYLATION. (musc.edu)
  • A poly(A) binding protein that is involved in promoting the extension of the poly A tails of MRNA. (musc.edu)
  • Poly(A) tails consist of many copies of a molecule called adenine, which is one of the building blocks of RNA and its chemical cousin, DNA. (medlineplus.gov)
  • Poly(A) tails protect the mRNA from being broken down and allow the mRNA to be transported within the cell. (medlineplus.gov)
  • USP15 knockdown decreased DEK protein stability and canceled KIF15-mediated DEK stabilization. (nih.gov)
  • 16. Monoubiquitination promotes calpain cleavage of the protein phosphatase 2A (PP2A) regulatory subunit α4, altering PP2A stability and microtubule-associated protein phosphorylation. (nih.gov)
  • Poly(A)-Binding Protein II" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings) . (musc.edu)
  • Inhibition of Poly(A)-binding protein with a synthetic RNA mimic reduces pain sensitization in mice. (ajmc.com)
  • Poly(A)-binding protein is also present during stages of mRNA metabolism including nonsense-mediated decay and nucleocytoplasmic trafficking. (wikipedia.org)
  • Previous work has shown that hepatic levels of human glutathione transferase zeta 1 (GSTZ1) protein, involved in tyrosine catabolism and responsible for metabolism of the investigational drug dichloroacetate, increase in cytosol after birth before reaching a plateau around age 7. (aspetjournals.org)
  • Tankyrase-binding motif (TBM) sequences in hVCL gene were identified and VCL sequences from various vertebrates, Drosophila melanogaster and Caenorhabditis elegans were aligned and compared. (peerj.com)
  • As proteins can serve as a primary transport mechanism for PFAS, understanding PFAS binding to proteins is essential for predictive physiological models where accurate values of protein binding constants are vital. (uri.edu)
  • However, the mechanism regulating this change of expression is still unknown, and previous studies showed that GSTZ1 mRNA levels did not correlate with GSTZ1 protein expression. (aspetjournals.org)
  • Controlled adsorption of multiple bioactive proteins enables targeted mast cell nanotherapy. (nih.gov)
  • Poly(A)-binding protein is differentially required for translation mediated by viral internal ribosome entry sites. (microbiologyresearch.org)
  • 9. The three Type 2A protein phosphatases, PP2Ac, PP4c and PP6c, are differentially regulated by Alpha4. (nih.gov)
  • The structure of human poly(A)-binding protein found in the nucleus (PABPN1) has yet to be well determined but it has been shown to contain a single RRM domain and an arginine rich carboxy terminal domain. (wikipedia.org)
  • Nucleus-specific proteins detach from the mRNA before it is exported to the cytoplasm while exporter proteins leave the mRNA in the cytoplasm and return to the nucleus for further mRNA export. (jove.com)
  • 6. Prolactin-inducible EDD E3 ubiquitin ligase promotes TORC1 signalling, anti-apoptotic protein expression, and drug resistance in breast cancer cells. (nih.gov)
  • The direct binding of NAD + prevents DBC1 from forming an inhibitory complex with the DNA-repair protein PARP1. (nih.gov)
  • Our data represents the first example of a DNA bound multi-protein complex which can slide along another DNA to facilitate target search. (elifesciences.org)
  • now report evidence from experiments on Escherichia coli that support a model in which the protein catalyst (RecA in the case of E. coli ) combines with a single strand of DNA to form a filamentous DNA-protein complex (RecA filament) that can then slide along a double-stranded DNA molecule to search for a complementary sequence of base pairs. (elifesciences.org)
  • The CCR4-NOT complex is a multi-subunit poly(A)-specific 3' exoribonuclease that catalyzes the deadenylation of mRNA. (bvsalud.org)
  • The nanos RNA is regulated by the protein Smaug, which binds to Smaug recognition elements (SREs) in the nanos 3'-UTR and nucleates the assembly of a larger repressor complex including the eIF4E-T paralog Cup and five additional proteins. (bvsalud.org)
  • 12. Structural basis of protein phosphatase 2A stable latency. (nih.gov)
  • Analysis of LTRs revealed a high number of common transcription factor binding sites, possibly explaining the known inducible and tissue-specific expression of individual elements. (mendeley.com)
  • My research interests are molecular mechanisms of plant abiotic stress response especially regulation of the signaling pathways triggered by ROS and controlled by protein kinases and phosphatases. (helsinki.fi)
  • Solution structure of the orphan PABC domain from Saccharomyces cerevisiae poly(A)-binding protein. (expasy.org)
  • The information presented here shows that the model where NS1 binds preferentially to the 5'-UTR of viral mRNA to stimulate translation is not accurate. (escholarship.org)
  • Rather than coating existing nanoparticles to link them to proteins, the researchers developed a technique to create nanoparticles composed of a small compound called poly(propylene sulfone) that allows proteins to bind without being altered. (nih.gov)
  • The ability to create nanoparticles coated with combinations of active proteins will also enable researchers to engineer other bioactive nanoparticles for a wide range of applications. (nih.gov)
  • The researchers, who are at California Polytechnic State University, have collaborated on this project with other scientists at the University of Michigan School of Medicine. (newswise.com)
  • The sheep anti-mouse IgG bound to the surface of the beads will bind defined antigens via a mouse primary antibody. (thermofisher.com)
  • In the indirect approach, the primary antibody is allowed to bind to the target in suspension prior to addition of the Dynabeads® M-280 Sheep anti-Mouse IgG. (thermofisher.com)
  • If your downstream application involves purification and elution of a target protein, you might want to crosslink your primary antibody to the sheep anti-mouse IgG on the Dynabeads® before immunoprecipitation to prevent co-elution of the primary antibody. (thermofisher.com)
  • 7. MID1 catalyzes the ubiquitination of protein phosphatase 2A and mutations within its Bbox1 domain disrupt polyubiquitination of alpha4 but not of PP2Ac. (nih.gov)
  • Retinoblastoma protein recruits histone deacetylase to repress transcription. (nih.gov)
  • The human rad51 protein: Polarity of strand transfer and stimulation by hRPA. (nih.gov)
  • From a total of 2578 human miRNAs tested, 63 miRNAs were more than 2-fold down-regulated in adults, of which miR-376c-3p was predicted to bind to the 3′ untranslated region of GSTZ1 mRNA. (aspetjournals.org)
  • If the final protein carries a target sequence for an organelle, it will be directed to the respective organelle. (jove.com)
  • Alternatively, it may link translation to mRNA decay, as eRF3 appears to interfere with the ability of PABP1 to multimerise/form on poly(A), potentially leading to PABP1 dissociation, deadenylation and, ultimately, turnover. (wikipedia.org)