A group of enzymes that oxidize diverse nitrogenous substances to yield nitrite. (Enzyme Nomenclature, 1992) EC 1.
Salts of nitrous acid or compounds containing the group NO2-. The inorganic nitrites of the type MNO2 (where M=metal) are all insoluble, except the alkali nitrites. The organic nitrites may be isomeric, but not identical with the corresponding nitro compounds. (Grant & Hackh's Chemical Dictionary, 5th ed)
An enzyme found primarily in BACTERIA and FUNGI that catalyzes the oxidation of ammonium hydroxide to nitrite. It is an iron-sulfur HEME; FLAVOPROTEIN containing siroheme and can utilize both NAD and NADP as cofactors. This enzyme was formerly classified as EC 1.6.6.4.
Oxidoreductases that are specific for the reduction of NITRATES.
Nitrous acid sodium salt. Used in many industrial processes, in meat curing, coloring, and preserving, and as a reagent in ANALYTICAL CHEMISTRY TECHNIQUES. It is used therapeutically as an antidote in cyanide poisoning. The compound is toxic and mutagenic and will react in vivo with secondary or tertiary amines thereby producing highly carcinogenic nitrosamines.
An IRON-containing protein that uses siroheme and 4Fe-4S iron-sulfur centers as prosthetic groups. It catalyzes the six-electron oxidation of AMMONIA to nitrite.
Inorganic or organic salts and esters of nitric acid. These compounds contain the NO3- radical.
A subclass of heme a containing cytochromes have a reduced alpha-band absorption of 587-592 nm. They are primarily found in microorganisms.
An enzyme that catalyzes the oxidation of nitrite to nitrate. It is a cytochrome protein that contains IRON and MOLYBDENUM.
A genus of gram-negative, aerobic, motile bacteria that occur in water and soil. Some are common inhabitants of the intestinal tract of vertebrates. These bacteria occasionally cause opportunistic infections in humans.
The type species of gram negative bacteria in the genus ALCALIGENES, found in soil. It is non-pathogenic, non-pigmented, and used for the production of amino acids.
A group of oxidoreductases that act on NADH or NADPH. In general, enzymes using NADH or NADPH to reduce a substrate are classified according to the reverse reaction, in which NAD+ or NADP+ is formally regarded as an acceptor. This subclass includes only those enzymes in which some other redox carrier is the acceptor. (Enzyme Nomenclature, 1992, p100) EC 1.6.
The class of all enzymes catalyzing oxidoreduction reactions. The substrate that is oxidized is regarded as a hydrogen donor. The systematic name is based on donor:acceptor oxidoreductase. The recommended name will be dehydrogenase, wherever this is possible; as an alternative, reductase can be used. Oxidase is only used in cases where O2 is the acceptor. (Enzyme Nomenclature, 1992, p9)
A family of gram-negative bacteria found primarily in the intestinal tracts and mucous membranes of warm-blooded animals. Its organisms are sometimes pathogenic.
Nitrate reduction process generally mediated by anaerobic bacteria by which nitrogen available to plants is converted to a gaseous form and lost from the soil or water column. It is a part of the nitrogen cycle.
The 30-kDa membrane-bound c-type cytochrome protein of mitochondria that functions as an electron donor to CYTOCHROME C GROUP in the mitochondrial and bacterial RESPIRATORY CHAIN. (From Enzyme Nomenclature, 1992, p545)
A bacterial protein from Pseudomonas, Bordetella, or Alcaligenes which operates as an electron transfer unit associated with the cytochrome chain. The protein has a molecular weight of approximately 16,000, contains a single copper atom, is intensively blue, and has a fluorescence emission band centered at 308nm.
A chemical reaction in which an electron is transferred from one molecule to another. The electron-donating molecule is the reducing agent or reductant; the electron-accepting molecule is the oxidizing agent or oxidant. Reducing and oxidizing agents function as conjugate reductant-oxidant pairs or redox pairs (Lehninger, Principles of Biochemistry, 1982, p471).
Hemeproteins whose characteristic mode of action involves transfer of reducing equivalents which are associated with a reversible change in oxidation state of the prosthetic group. Formally, this redox change involves a single-electron, reversible equilibrium between the Fe(II) and Fe(III) states of the central iron atom (From Enzyme Nomenclature, 1992, p539). The various cytochrome subclasses are organized by the type of HEME and by the wavelength range of their reduced alpha-absorption bands.
Gram-negative non-motile bacteria found in soil or brines.
Enzymes that catalyze the reversible reduction of alpha-carboxyl group of 3-hydroxy-3-methylglutaryl-coenzyme A to yield MEVALONIC ACID.
The color-furnishing portion of hemoglobin. It is found free in tissues and as the prosthetic group in many hemeproteins.
Ribonucleotide Reductases are enzymes that catalyze the conversion of ribonucleotides to deoxyribonucleotides, which is a crucial step in DNA synthesis and repair, utilizing a radical mechanism for this conversion.
The complete absence, or (loosely) the paucity, of gaseous or dissolved elemental oxygen in a given place or environment. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
Dithionite. The dithionous acid ion and its salts.
A FLAVOPROTEIN oxidoreductase that occurs both as a soluble enzyme and a membrane-bound enzyme due to ALTERNATIVE SPLICING of a single mRNA. The soluble form is present mainly in ERYTHROCYTES and is involved in the reduction of METHEMOGLOBIN. The membrane-bound form of the enzyme is found primarily in the ENDOPLASMIC RETICULUM and outer mitochondrial membrane, where it participates in the desaturation of FATTY ACIDS; CHOLESTEROL biosynthesis and drug metabolism. A deficiency in the enzyme can result in METHEMOGLOBINEMIA.
A free radical gas produced endogenously by a variety of mammalian cells, synthesized from ARGININE by NITRIC OXIDE SYNTHASE. Nitric oxide is one of the ENDOTHELIUM-DEPENDENT RELAXING FACTORS released by the vascular endothelium and mediates VASODILATION. It also inhibits platelet aggregation, induces disaggregation of aggregated platelets, and inhibits platelet adhesion to the vascular endothelium. Nitric oxide activates cytosolic GUANYLATE CYCLASE and thus elevates intracellular levels of CYCLIC GMP.
A heavy metal trace element with the atomic symbol Cu, atomic number 29, and atomic weight 63.55.
The process by which ELECTRONS are transported from a reduced substrate to molecular OXYGEN. (From Bennington, Saunders Dictionary and Encyclopedia of Laboratory Medicine and Technology, 1984, p270)
The type species of the genus NITROSOMONAS, a gram-negative chemolithotroph that oxidizes ammonia to nitrite. It is found in soil, sewage, freshwater, and on building walls, and especially in polluted areas where air contains high levels of nitrogen compounds.
A species of gram-negative, coccoid, mostly chemolithoautotrophic bacteria, in the family RHODOBACTERACEAE. Some strains can grow anaerobically.
Organic compounds that contain the (-NH2OH) radical.
The art or process of comparing photometrically the relative intensities of the light in different parts of the spectrum.
Catalyzes the oxidation of GLUTATHIONE to GLUTATHIONE DISULFIDE in the presence of NADP+. Deficiency in the enzyme is associated with HEMOLYTIC ANEMIA. Formerly listed as EC 1.6.4.2.
An enzyme that utilizes NADH or NADPH to reduce FLAVINS. It is involved in a number of biological processes that require reduced flavin for their functions such as bacterial bioluminescence. Formerly listed as EC 1.6.8.1 and EC 1.5.1.29.
A FLAVOPROTEIN enzyme that catalyzes the oxidation of THIOREDOXINS to thioredoxin disulfide in the presence of NADP+. It was formerly listed as EC 1.6.4.5
Nitrogen oxide (N2O). A colorless, odorless gas that is used as an anesthetic and analgesic. High concentrations cause a narcotic effect and may replace oxygen, causing death by asphyxia. It is also used as a food aerosol in the preparation of whipping cream.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
A flavoprotein that catalyzes the reduction of heme-thiolate-dependent monooxygenases and is part of the microsomal hydroxylating system. EC 1.6.2.4.
Iron-containing proteins that transfer electrons, usually at a low potential, to flavoproteins; the iron is not present as in heme. (McGraw-Hill Dictionary of Scientific and Technical Terms, 5th ed)
An enzyme that catalyzes the oxidation and reduction of FERREDOXIN or ADRENODOXIN in the presence of NADP. EC 1.18.1.2 was formerly listed as EC 1.6.7.1 and EC 1.6.99.4.
A colorless inorganic compound (HONH2) used in organic synthesis and as a reducing agent, due to its ability to donate nitric oxide.
A genus of gram-negative, anaerobic, rod-shaped bacteria isolated from the bovine RUMEN, the human gingival sulcus, and dental PULPITIS infections.
A vasodilator that is administered by inhalation. It is also used recreationally due to its supposed ability to induce euphoria and act as an aphrodisiac.
A technique applicable to the wide variety of substances which exhibit paramagnetism because of the magnetic moments of unpaired electrons. The spectra are useful for detection and identification, for determination of electron structure, for study of interactions between molecules, and for measurement of nuclear spins and moments. (From McGraw-Hill Encyclopedia of Science and Technology, 7th edition) Electron nuclear double resonance (ENDOR) spectroscopy is a variant of the technique which can give enhanced resolution. Electron spin resonance analysis can now be used in vivo, including imaging applications such as MAGNETIC RESONANCE IMAGING.
A group of cytochromes with covalent thioether linkages between either or both of the vinyl side chains of protoheme and the protein. (Enzyme Nomenclature, 1992, p539)
Cytochrome reductases are enzymes that catalyze the transfer of electrons from donor molecules to cytochromes in electron transport chains, playing a crucial role in cellular respiration and energy production within cells.
A family in the order Chromatiales, class GAMMAPROTEOBACTERIA. These are haloalkaliphilic, phototrophic bacteria that deposit elemental sulfur outside their cells.
Proteins found in any species of bacterium.
The rate dynamics in chemical or physical systems.
A genus of gram-negative, aerobic, rod-shaped bacteria widely distributed in nature. Some species are pathogenic for humans, animals, and plants.
Life or metabolic reactions occurring in an environment containing oxygen.
The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION.
The functional hereditary units of BACTERIA.
A genus of rod-shaped, oval, or bean-shaped bacteria found in soil and fresh water. Polar prosthecae are present and cells reproduce by budding at the tips of the prosthecae. Cells of this genus are aerobic and grow best with one-carbon compounds. (From Bergey's Manual of Determinative Bacteriology, 9th ed)
A FERREDOXIN-dependent oxidoreductase that is primarily found in PLANTS where it plays an important role in the assimilation of SULFUR atoms for the production of CYSTEINE and METHIONINE.
A multisubunit enzyme complex containing CYTOCHROME A GROUP; CYTOCHROME A3; two copper atoms; and 13 different protein subunits. It is the terminal oxidase complex of the RESPIRATORY CHAIN and collects electrons that are transferred from the reduced CYTOCHROME C GROUP and donates them to molecular OXYGEN, which is then reduced to water. The redox reaction is simultaneously coupled to the transport of PROTONS across the inner mitochondrial membrane.
A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection.
The type species in the genus RALSTONIA. It is often found in the hospital ward as a contaminant of antiseptic and disinfectant solutions.
A species of bacteria isolated from soil.
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
An enzyme of the oxidoreductase class that catalyzes the reaction 7,8-dihyrofolate and NADPH to yield 5,6,7,8-tetrahydrofolate and NADPH+, producing reduced folate for amino acid metabolism, purine ring synthesis, and the formation of deoxythymidine monophosphate. Methotrexate and other folic acid antagonists used as chemotherapeutic drugs act by inhibiting this enzyme. (Dorland, 27th ed) EC 1.5.1.3.
A genus of gram-negative, anaerobic, rod-shaped bacteria capable of reducing sulfur compounds to hydrogen sulfide. Organisms are isolated from anaerobic mud of fresh and salt water, animal intestines, manure, and feces.
A genus of gram-negative, ellipsoidal or rod-shaped bacteria whose major source of energy and reducing power is from the oxidation of ammonia to nitrite. Its species occur in soils, oceans, lakes, rivers, and sewage disposal systems.
Oxidoreductases with specificity for oxidation or reduction of SULFUR COMPOUNDS.
An element with the atomic symbol N, atomic number 7, and atomic weight [14.00643; 14.00728]. Nitrogen exists as a diatomic gas and makes up about 78% of the earth's atmosphere by volume. It is a constituent of proteins and nucleic acids and found in all living cells.
Any of the processes by which cytoplasmic or intercellular factors influence the differential control of gene action in bacteria.
Derivatives of ammonium compounds, NH4+ Y-, in which all four of the hydrogens bonded to nitrogen have been replaced with hydrocarbyl groups. These are distinguished from IMINES which are RN=CR2.
The type species of gram negative, aerobic bacteria in the genus ACHROMOBACTER. Previously in the genus ALCALIGENES, the classification and nomenclature of this species has been frequently emended. The two subspecies, Achromobacter xylosoxidans subsp. denitrificans and Achromobacter xylosoxidans subsp. xylosoxidans are associated with infections.
The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence.
A flavoprotein amine oxidoreductase that catalyzes the reversible conversion of 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. This enzyme was formerly classified as EC 1.1.1.171.
1,1'-Bis(phenylmethyl)4,4'-bipyridinium dichloride. Oxidation-reduction indicator.
A colorless alkaline gas. It is formed in the body during decomposition of organic materials during a large number of metabolically important reactions. Note that the aqueous form of ammonia is referred to as AMMONIUM HYDROXIDE.
The measurement of the amplitude of the components of a complex waveform throughout the frequency range of the waveform. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
An NAD-dependent enzyme that catalyzes the oxidation of nitrite to nitrate. It is a FLAVOPROTEIN that contains IRON and MOLYBDENUM and is involved in the first step of nitrate assimilation in PLANTS; FUNGI; and BACTERIA. It was formerly classified as EC 1.6.6.1.
Nicotinamide adenine dinucleotide phosphate. A coenzyme composed of ribosylnicotinamide 5'-phosphate (NMN) coupled by pyrophosphate linkage to the 5'-phosphate adenosine 2',5'-bisphosphate. It serves as an electron carrier in a number of reactions, being alternately oxidized (NADP+) and reduced (NADPH). (Dorland, 27th ed)
A group of proteins possessing only the iron-sulfur complex as the prosthetic group. These proteins participate in all major pathways of electron transport: photosynthesis, respiration, hydroxylation and bacterial hydrogen and nitrogen fixation.
Use of a pulse of X-rays or fast electrons to generate free radicals for spectroscopic examination.
Inorganic salts of sulfurous acid.
Proteins that contain an iron-porphyrin, or heme, prosthetic group resembling that of hemoglobin. (From Lehninger, Principles of Biochemistry, 1982, p480)
Reductases that catalyze the reaction of peptide-L-methionine -S-oxide + thioredoxin to produce peptide-L-methionine + thioredoxin disulfide + H(2)O.
Compounds that inhibit HMG-CoA reductases. They have been shown to directly lower cholesterol synthesis.
An enzyme of the oxidoreductase class that catalyzes the formation of 2'-deoxyribonucleotides from the corresponding ribonucleotides using NADPH as the ultimate electron donor. The deoxyribonucleoside diphosphates are used in DNA synthesis. (From Dorland, 27th ed) EC 1.17.4.1.
Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations.
The parts of a macromolecule that directly participate in its specific combination with another molecule.
The degree of similarity between sequences of amino acids. This information is useful for the analyzing genetic relatedness of proteins and species.
The normality of a solution with respect to HYDROGEN ions; H+. It is related to acidity measurements in most cases by pH = log 1/2[1/(H+)], where (H+) is the hydrogen ion concentration in gram equivalents per liter of solution. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
An enzyme that catalyzes the reduction of 6,7-dihydropteridine to 5,6,7,8-tetrahydropteridine in the presence of NADP+. Defects in the enzyme are a cause of PHENYLKETONURIA II. Formerly listed as EC 1.6.99.7.
Type C cytochromes that are small (12-14 kD) single-heme proteins. They function as mobile electron carriers between membrane-bound enzymes in photosynthetic BACTERIA.
Spherical phototrophic bacteria found in mud and stagnant water exposed to light.
An element with atomic symbol O, atomic number 8, and atomic weight [15.99903; 15.99977]. It is the most abundant element on earth and essential for respiration.
The insertion of recombinant DNA molecules from prokaryotic and/or eukaryotic sources into a replicating vehicle, such as a plasmid or virus vector, and the introduction of the resultant hybrid molecules into recipient cells without altering the viability of those cells.
NAD(P)H:(quinone acceptor) oxidoreductases. A family that includes three enzymes which are distinguished by their sensitivity to various inhibitors. EC 1.6.99.2 (NAD(P)H DEHYDROGENASE (QUINONE);) is a flavoprotein which reduces various quinones in the presence of NADH or NADPH and is inhibited by dicoumarol. EC 1.6.99.5 (NADH dehydrogenase (quinone)) requires NADH, is inhibited by AMP and 2,4-dinitrophenol but not by dicoumarol or folic acid derivatives. EC 1.6.99.6 (NADPH dehydrogenase (quinone)) requires NADPH and is inhibited by dicoumarol and folic acid derivatives but not by 2,4-dinitrophenol.
Proteins that have one or more tightly bound metal ions forming part of their structure. (Dorland, 28th ed)
A multistage process that includes cloning, physical mapping, subcloning, determination of the DNA SEQUENCE, and information analysis.
Stable elementary particles having the smallest known negative charge, present in all elements; also called negatrons. Positively charged electrons are called positrons. The numbers, energies and arrangement of electrons around atomic nuclei determine the chemical identities of elements. Beams of electrons are called CATHODE RAYS.
Inorganic salts of thiosulfuric acid possessing the general formula R2S2O3.
A subclass of enzymes which includes all dehydrogenases acting on primary and secondary alcohols as well as hemiacetals. They are further classified according to the acceptor which can be NAD+ or NADP+ (subclass 1.1.1), cytochrome (1.1.2), oxygen (1.1.3), quinone (1.1.5), or another acceptor (1.1.99).
A triazine herbicide.
A subclass of enzymes which includes all dehydrogenases acting on carbon-carbon bonds. This enzyme group includes all the enzymes that introduce double bonds into substrates by direct dehydrogenation of carbon-carbon single bonds.
Derivatives of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton. Flavin derivatives serve an electron transfer function as ENZYME COFACTORS in FLAVOPROTEINS.
The facilitation of a chemical reaction by material (catalyst) that is not consumed by the reaction.
A poisonous dipyridilium compound used as contact herbicide. Contact with concentrated solutions causes irritation of the skin, cracking and shedding of the nails, and delayed healing of cuts and wounds.
A subtype of thioredoxin reductase found primarily in the CYTOSOL.
One of the three domains of life (the others being Eukarya and ARCHAEA), also called Eubacteria. They are unicellular prokaryotic microorganisms which generally possess rigid cell walls, multiply by cell division, and exhibit three principal forms: round or coccal, rodlike or bacillary, and spiral or spirochetal. Bacteria can be classified by their response to OXYGEN: aerobic, anaerobic, or facultatively anaerobic; by the mode by which they obtain their energy: chemotrophy (via chemical reaction) or PHOTOTROPHY (via light reaction); for chemotrophs by their source of chemical energy: CHEMOLITHOTROPHY (from inorganic compounds) or chemoorganotrophy (from organic compounds); and by their source for CARBON; NITROGEN; etc.; HETEROTROPHY (from organic sources) or AUTOTROPHY (from CARBON DIOXIDE). They can also be classified by whether or not they stain (based on the structure of their CELL WALLS) with CRYSTAL VIOLET dye: gram-negative or gram-positive.
Models used experimentally or theoretically to study molecular shape, electronic properties, or interactions; includes analogous molecules, computer-generated graphics, and mechanical structures.
Carbon monoxide (CO). A poisonous colorless, odorless, tasteless gas. It combines with hemoglobin to form carboxyhemoglobin, which has no oxygen carrying capacity. The resultant oxygen deprivation causes headache, dizziness, decreased pulse and respiratory rates, unconsciousness, and death. (From Merck Index, 11th ed)
Highly toxic compound which can cause skin irritation and sensitization. It is used in manufacture of azo dyes.
A family of phototrophic purple sulfur bacteria that deposit globules of elemental sulfur inside their cells. They are found in diverse aquatic environments.
An NAD-dependent enzyme that catalyzes the oxidation of acyl-[acyl-carrier protein] to trans-2,3-dehydroacyl-[acyl-carrier protein]. It has a preference for acyl groups with a carbon chain length between 4 to 16.
Inorganic oxides that contain nitrogen.
A group of dipyridinium chloride derivatives that are used as oxidation-reduction indicators. The general formula is 1,1'-di-R-4,4'-bipyridinium chloride, where R = methyl, ethyl, benzyl or, betaine.
The study of crystal structure using X-RAY DIFFRACTION techniques. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
The oxygen-carrying proteins of ERYTHROCYTES. They are found in all vertebrates and some invertebrates. The number of globin subunits in the hemoglobin quaternary structure differs between species. Structures range from monomeric to a variety of multimeric arrangements.
The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain).
Inorganic compounds that contain tungsten as an integral part of the molecule.
Determination of the spectra of ultraviolet absorption by specific molecules in gases or liquids, for example Cl2, SO2, NO2, CS2, ozone, mercury vapor, and various unsaturated compounds. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)

Denitrifying Pseudomonas aeruginosa: some parameters of growth and active transport. (1/435)

Optimal cell yield of Pseudomonas aeruginosa grown under denitrifying conditions was obtained with 100 mM nitrate as the terminal electron acceptor, irrespective of the medium used. Nitrite as the terminal electron acceptor supported poor denitrifying growth when concentrations of less than 15 mM, but not higher, were used, apparently owing to toxicity exerted by nitrite. Nitrite accumulated in the medium during early exponential phase when nitrate was the terminal electron acceptor and then decreased to extinction before midexponential phase. The maximal rate of glucose and gluconate transport was supported by 1 mM nitrate or nitrite as the terminal electron acceptor under anaerobic conditions. The transport rate was greater with nitrate than with nitrite as the terminal electron acceptor, but the greatest transport rate was observed under aerobic conditions with oxygen as the terminal electron acceptor. When P. aeruginosa was inoculated into a denitrifying environment, nitrate reductase was detected after 3 h of incubation, nitrite reductase was detected after another 4 h of incubation, and maximal nitrate and nitrite reductase activities peaked together during midexponential phase. The latter coincided with maximal glucose transport activity.  (+info)

Molecular characterization of the nitrite-reducing system of Staphylococcus carnosus. (2/435)

Characterization of a nitrite reductase-negative Staphylococcus carnosus Tn917 mutant led to the identification of the nir operon, which encodes NirBD, the dissimilatory NADH-dependent nitrite reductase; SirA, the putative oxidase and chelatase, and SirB, the uroporphyrinogen III methylase, both of which are necessary for biosynthesis of the siroheme prosthetic group; and NirR, which revealed no convincing similarity to proteins with known functions. We suggest that NirR is essential for nir promoter activity. In the absence of NirR, a weak promoter upstream of sirA seems to drive transcription of sirA, nirB, nirD, and sirB in the stationary-growth phase. In primer extension experiments one predominant and several weaker transcription start sites were identified in the nir promoter region. Northern blot analyses indicated that anaerobiosis and nitrite are induction factors of the nir operon: cells grown aerobically with nitrite revealed small amounts of full-length transcript whereas cells grown anaerobically with or without nitrite showed large amounts of full-length transcript. Although a transcript is detectable, no nitrite reduction occurs in cells grown aerobically with nitrite, indicating an additional oxygen-controlled step at the level of translation, enzyme folding, assembly, or insertion of prosthetic groups. The nitrite-reducing activity expressed during anaerobiosis is switched off reversibly when the oxygen tension increases, most likely due to competition for electrons with the aerobic respiratory chain. Another gene, nirC, is located upstream of the nir operon. nirC encodes a putative integral membrane-spanning protein of unknown function. A nirC mutant showed no distinct phenotype.  (+info)

The GATA factor AreA is essential for chromatin remodelling in a eukaryotic bidirectional promoter. (3/435)

The linked niiA and niaD genes of Aspergillus nidulans are transcribed divergently. The expression of these genes is subject to a dual control system. They are induced by nitrate and repressed by ammonium. AreA mediates derepression in the absence of ammonium and NirA supposedly mediates nitrate induction. Out of 10 GATA sites, a central cluster (sites 5-8) is responsible for approximately 80% of the transcriptional activity of the promoter on both genes. We show occupancy in vivo of site 5 by the AreA protein, even under conditions of repression. Sites 5-8 are situated in a pre-set nucleosome-free region. Under conditions of expression, a drastic nucleosomal rearrangement takes place and the positioning of at least five nucleosomes flanking the central region is lost. Remodelling is strictly dependent on the presence of an active areA gene product, and independent from the NirA-specific and essential transcription factor. Thus, nucleosome remodelling is independent from the transcriptional activation of the niiA-niaD promoter. The results presented cast doubts on the role of NirA as the unique transducer of the nitrate induction signal. We demonstrate, for the first time in vivo, that a GATA factor is involved directly in chromatin remodelling.  (+info)

Nitrite reductase from Pseudomonas aeruginosa released by antimicrobial agents and complement induces interleukin-8 production in bronchial epithelial cells. (4/435)

We have recently reported that nitrite reductase, a bifunctional enzyme located in the periplasmic space of Pseudomonas aeruginosa, could induce interleukin-8 (IL-8) generation in a variety of respiratory cells, including bronchial epithelial cells (K. Oishi et al. Infect. Immun. 65:2648-2655, 1997). In this report, we examined the mode of nitrite reductase (PNR) release from a serum-sensitive strain of live P. aeruginosa cells during in vitro treatment with four different antimicrobial agents or human complement. Bacterial killing of P. aeruginosa by antimicrobial agents induced PNR release and mediated IL-8 production in human bronchial epithelial (BET-1A) cells. Among these agents, imipenem demonstrated rapid killing of P. aeruginosa as well as rapid release of PNR and resulted in the highest IL-8 production. Complement-mediated killing of P. aeruginosa was also associated with PNR release and enhanced IL-8 production. The immunoprecipitates of the aliquots of bacterial culture containing imipenem or complement with anti-PNR immunoglobulin G (IgG) induced twofold-higher IL-8 production than did the immunoprecipitates of the aliquots of bacterial culture with a control IgG. These pieces of evidence confirmed that PNR released in the aliquots of bacterial culture was responsible for IL-8 production in the BET-1A cells. Furthermore, the culture supernatants of the BET-1A cells stimulated with aliquots of bacterial culture containing antimicrobial agents or complement similarly mediated neutrophil migration in vitro. These data support the possibility that a potent inducer of IL-8, PNR, could be released from P. aeruginosa after exposure to antimicrobial agents or complement and contributes to neutrophil migration in the airways during bronchopulmonary infections with P. aeruginosa.  (+info)

PCR detection of genes encoding nitrite reductase in denitrifying bacteria. (5/435)

Using consensus regions in gene sequences encoding the two forms of nitrite reductase (Nir), a key enzyme in the denitrification pathway, we designed two sets of PCR primers to amplify cd1- and Cu-nir. The primers were evaluated by screening defined denitrifying strains, denitrifying isolates from wastewater treatment plants, and extracts from activated sludge. Sequence relationships of nir genes were also established. The cd1 primers were designed to amplify a 778 to 799-bp region of cd1-nir in the six published sequences. Likewise, the Cu primers amplified a 473-bp region in seven of the eight published Cu-nir sequences. Together, the two sets of PCR primers amplified nir genes in nine species within four genera, as well as in four of the seven sludge isolates. The primers did not amplify genes of nondenitrifying strains. The Cu primers amplified the expected fragment in all 13 sludge samples, but cd1-nir fragments were only obtained in five samples. PCR products of the expected sizes were verified as nir genes after hybridization to DNA probes, except in one case. The sequenced nir fragments were related to other nir sequences, demonstrating that the primers amplified the correct gene. The selected primer sites for Cu-nir were conserved, while broad-range primers targeting conserved regions of cd1-nir seem to be difficult to find. We also report on the existence of Cu-nir in Paracoccus denitrificans Pd1222.  (+info)

The blue copper-containing nitrite reductase from Alcaligenes xylosoxidans: cloning of the nirA gene and characterization of the recombinant enzyme. (6/435)

The nirA gene encoding the blue dissimilatory nitrite reductase from Alcaligenes xylosoxidans has been cloned and sequenced. To our knowledge, this is the first report of the characterization of a gene encoding a blue copper-containing nitrite reductase. The deduced amino acid sequence exhibits a high degree of similarity to other copper-containing nitrite reductases from various bacterial sources. The full-length protein included a 24-amino-acid leader peptide. The nirA gene was overexpressed in Escherichia coli and was shown to be exported to the periplasm. Purification was achieved in a single step, and analysis of the recombinant Nir enzyme revealed that cleavage of the signal peptide occurred at a position identical to that for the native enzyme isolated from A. xylosoxidans. The recombinant Nir isolated directly was blue and trimeric and, on the basis of electron paramagnetic resonance spectroscopy and metal analysis, possessed only type 1 copper centers. This type 2-depleted enzyme preparation also had a low nitrite reductase enzyme activity. Incubation of the periplasmic fraction with copper sulfate prior to purification resulted in the isolation of an enzyme with a full complement of type 1 and type 2 copper centers and a high specific activity. The kinetic properties of the recombinant enzyme were indistinguishable from those of the native nitrite reductase isolated from A. xylosoxidans. This rapid isolation procedure will greatly facilitate genetic and biochemical characterization of both wild-type and mutant derivatives of this protein.  (+info)

Bacterial nitric oxide synthesis. (7/435)

The structure-function relationships in nitrite reductases, key enzymes in the dissimilatory denitrification pathway which reduce nitrite to nitric oxide (NO), are reviewed in this paper. The mechanisms of NO production are discussed in detail and special attention is paid to new structural information, such as the high resolution structure of the copper- and heme-containing enzymes from different sources. Finally, some implications relevant to regulation of the steady state levels of NO in denitrifiers are presented.  (+info)

Does the reduction of c heme trigger the conformational change of crystalline nitrite reductase? (8/435)

The structures of nitrite reductase from Paracoccus denitrificans GB17 (NiR-Pd) and Pseudomonas aeruginosa (NiR-Pa) have been described for the oxidized and reduced state (Fulop, V., Moir, J. W. B., Ferguson, S. J., and Hajdu, J. (1995) Cell 81, 369-377; Nurizzo, D., Silvestrini, M. C., Mathieu, M., Cutruzzola, F., Bourgeois, D., Fulop, V., Hajdu, J., Brunori, M., Tegoni, M., and Cambillau, C. (1997) Structure 5, 1157-1171; Nurizzo, D., Cutruzzola, F., Arese, M., Bourgeois, D., Brunori, M., Cambillau, C. , and Tegoni, M. (1998) Biochemistry 37, 13987-13996). Major conformational rearrangements are observed in the extreme states although they are more substantial in NiR-Pd. The four structures differ significantly in the c heme domains. Upon reduction, a His17/Met106 heme-ligand switch is observed in NiR-Pd together with concerted movements of the Tyr in the distal site of the d1 heme (Tyr10 in NiR-Pa, Tyr25 in NiR-Pd) and of a loop of the c heme domain (56-62 in NiR-Pa, 99-116 in NiR-Pd). Whether the reduction of the c heme, which undergoes the major rearrangements, is the trigger of these movements is the question addressed by our study. This conformational reorganization is not observed in the partially reduced species, in which the c heme is partially or largely (15-90%) reduced but the d1 heme is still oxidized. These results suggest that the d1 heme reduction is likely to be responsible of the movements. We speculate about the mechanistic explanation as to why the opening of the d1 heme distal pocket only occurs upon electron transfer to the d1 heme itself, to allow binding of the physiological substrate NO2- exclusively to the reduced metal center.  (+info)

Nitrite reductases are a group of enzymes that catalyze the reduction of nitrite (NO2-) to nitric oxide (NO). This reaction is an important part of the nitrogen cycle, particularly in denitrification and dissimilatory nitrate reduction to ammonium (DNRA) processes. Nitrite reductases can be classified into two main types based on their metal co-factors: copper-containing nitrite reductases (CuNiRs) and cytochrome cd1 nitrite reductases. CuNiRs are typically found in bacteria and fungi, while cytochrome cd1 nitrite reductases are primarily found in bacteria. These enzymes play a crucial role in the global nitrogen cycle and have potential implications for environmental and medical research.

In a medical context, nitrites are typically referred to as organic compounds that contain a functional group with the formula R-N=O, where R represents an alkyl or aryl group. They are commonly used in medicine as vasodilators, which means they widen and relax blood vessels, improving blood flow and lowering blood pressure.

One example of a nitrite used medically is amyl nitrite, which was previously used to treat angina pectoris, a type of chest pain caused by reduced blood flow to the heart muscle. However, its use has largely been replaced by other medications due to safety concerns and the availability of more effective treatments.

It's worth noting that inorganic nitrites, such as sodium nitrite, are also used in medicine for various purposes, including as a preservative in food and as a medication to treat cyanide poisoning. However, these compounds have different chemical properties and uses than organic nitrites.

Nitrate reductases are a group of enzymes that catalyze the reduction of nitrate (NO3-) to nitrite (NO2-). This process is an essential part of the nitrogen cycle, where nitrate serves as a terminal electron acceptor in anaerobic respiration for many bacteria and archaea. In plants, this enzyme plays a crucial role in nitrogen assimilation by reducing nitrate to ammonium (NH4+), which can then be incorporated into organic compounds. Nitrate reductases require various cofactors, such as molybdenum, heme, and/or FAD, for their activity. There are three main types of nitrate reductases: membrane-bound (which use menaquinol as an electron donor), cytoplasmic (which use NADH or NADPH as an electron donor), and assimilatory (which also use NADH or NADPH as an electron donor).

Sodium nitrite is an inorganic compound with the chemical formula NaNO2. Medically, it is used as a vasodilator and an antidote for cyanide poisoning. It is a white to slightly yellowish crystalline powder that is very soluble in water and moderately soluble in alcohol. In solution, it is easily oxidized to sodium nitrate (NaNO3), which is stable and less toxic.

In the food industry, sodium nitrite is used as a preservative and coloring agent in meat and fish products. It helps prevent the growth of harmful bacteria, such as Clostridium botulinum, which can cause botulism. However, under certain conditions, sodium nitrite can react with proteins in food to form potentially carcinogenic compounds, so its use is regulated.

Ferredoxin-nitrite reductase is an enzyme found in certain bacteria, archaea, and organelles of plants such as chloroplasts. The enzyme plays a crucial role in the nitrogen fixation process, where it catalyzes the reduction of nitrite (NO2-) to ammonia (NH3) using ferredoxin as the electron donor. This reaction is a part of the nitrogen cycle and is essential for the assimilation of nitrogen into organic compounds by plants and microorganisms. The enzyme contains iron-sulfur clusters and siroheme as cofactors, which facilitate the electron transfer process during the reduction of nitrite to ammonia.

Nitrates are chemical compounds that consist of a nitrogen atom bonded to three oxygen atoms (NO3-). In the context of medical science, nitrates are often discussed in relation to their use as medications or their presence in food and water.

As medications, nitrates are commonly used to treat angina (chest pain) caused by coronary artery disease. Nitrates work by relaxing and widening blood vessels, which improves blood flow and reduces the workload on the heart. Some examples of nitrate medications include nitroglycerin, isosorbide dinitrate, and isosorbide mononitrate.

In food and water, nitrates are naturally occurring compounds that can be found in a variety of vegetables, such as spinach, beets, and lettuce. They can also be present in fertilizers and industrial waste, which can contaminate groundwater and surface water sources. While nitrates themselves are not harmful, they can be converted into potentially harmful compounds called nitrites under certain conditions, particularly in the digestive system of young children or in the presence of bacteria such as those found in unpasteurized foods. Excessive levels of nitrites can react with hemoglobin in the blood to form methemoglobin, which cannot transport oxygen effectively and can lead to a condition called methemoglobinemia.

Cytochrome a1 is a type of cytochrome found in the inner mitochondrial membrane and is a component of the electron transport chain, which plays a crucial role in cellular respiration and energy production. Specifically, cytochrome a1 is involved in the transfer of electrons from cytochrome c to oxygen, the final electron acceptor in the electron transport chain.

Cytochromes are heme-containing proteins that contain a prosthetic group called heme, which consists of an iron atom coordinated to a porphyrin ring. The different types of cytochromes are classified based on the type of heme they contain and their absorption spectra. Cytochrome a1 contains a heme with a formyl group at the 2 position (heme a) and has an alpha band in its absorption spectrum at around 605 nm.

It is worth noting that cytochrome a1 is not always present in all organisms, and its function may vary depending on the species. In some cases, it may be replaced by other types of cytochromes or have additional functions beyond its role in the electron transport chain.

Nitrate reductase is an enzyme that catalyzes the reduction of nitrate (NO3-) to nitrite (NO2-). It is widely distributed in nature and plays a crucial role in the nitrogen cycle, particularly in the process of nitrate assimilation by plants, fungi, and some bacteria.

In plants, nitrate reductase is primarily located in the cytoplasm and chloroplasts of plant cells. It requires reduced forms of nicotinamide adenine dinucleotide phosphate (NADPH) or flavin adenine dinucleotide (FADH2) as electron donors to facilitate the reduction of nitrate to nitrite.

The reaction catalyzed by nitrate reductase can be summarized as follows:
NO3- + NAD(P)H + H+ -> NO2- + NAD(P)+ + H2O

It is worth noting that there are different types of nitrate reductases, each with distinct properties and functions. For example, some nitrate reductases require molybdenum cofactor as a prosthetic group for their catalytic activity, while others do not. Additionally, some nitrate reductases are membrane-bound, while others are soluble enzymes.

Overall, nitrate reductase is an essential enzyme in the global nitrogen cycle and has significant implications for agriculture, environmental science, and microbiology.

'Alcaligenes' is a genus of gram-negative, aerobic bacteria that are commonly found in soil, water, and the respiratory and intestinal tracts of animals. These bacteria are capable of using a variety of organic compounds as their sole source of carbon and energy. Some species of Alcaligenes have been known to cause opportunistic infections in humans, particularly in individuals with weakened immune systems. However, they are not considered major human pathogens.

The name 'Alcaligenes' comes from the Latin word "alcali," meaning "alkali," and the Greek word "genos," meaning "kind" or "race." This is because many species of Alcaligenes can grow in alkaline environments with a pH above 7.

It's worth noting that while Alcaligenes species are not typically harmful to healthy individuals, they may be resistant to certain antibiotics and can cause serious infections in people with compromised immune systems. Therefore, it is important for healthcare professionals to consider the possibility of Alcaligenes infection in patients who are at risk and to choose appropriate antibiotic therapy based on laboratory testing.

*Alcaligenes faecalis* is a species of gram-negative, rod-shaped bacteria that is commonly found in the environment, including soil, water, and the gastrointestinal tracts of animals. It is a facultative anaerobe, which means it can grow in both aerobic (with oxygen) and anaerobic (without oxygen) conditions.

The bacteria are generally not harmful to healthy individuals, but they have been associated with various types of infections in people with weakened immune systems or underlying medical conditions. These infections can include urinary tract infections, wound infections, pneumonia, and bacteremia (bloodstream infections).

*Alcaligenes faecalis* is resistant to many antibiotics, which can make treating infections caused by this bacteria challenging. It is important to identify the specific species of bacteria causing an infection so that appropriate antibiotic therapy can be administered.

NADH, NADPH oxidoreductases are a class of enzymes that catalyze the redox reaction between NADH or NADPH and various electron acceptors. These enzymes play a crucial role in cellular metabolism by transferring electrons from NADH or NADPH to other molecules, which is essential for many biochemical reactions.

NADH (nicotinamide adenine dinucleotide hydrogen) and NADPH (nicotinamide adenine dinucleotide phosphate hydrogen) are coenzymes that act as electron carriers in redox reactions. They consist of a nicotinamide ring, which undergoes reduction or oxidation by accepting or donating electrons and a proton (H+).

NADH, NADPH oxidoreductases are classified based on their structure and mechanism of action. Some examples include:

1. Dehydrogenases: These enzymes catalyze the oxidation of NADH or NADPH to NAD+ or NADP+ while reducing an organic substrate. Examples include lactate dehydrogenase, alcohol dehydrogenase, and malate dehydrogenase.
2. Oxidases: These enzymes catalyze the oxidation of NADH or NADPH to NAD+ or NADP+ while reducing molecular oxygen (O2) to water (H2O). Examples include NADH oxidase and NADPH oxidase.
3. Reductases: These enzymes catalyze the reduction of various electron acceptors using NADH or NADPH as a source of electrons. Examples include glutathione reductase, thioredoxin reductase, and nitrate reductase.

Overall, NADH, NADPH oxidoreductases are essential for maintaining the redox balance in cells and play a critical role in various metabolic pathways, including energy production, detoxification, and biosynthesis.

Oxidoreductases are a class of enzymes that catalyze oxidation-reduction reactions, which involve the transfer of electrons from one molecule (the reductant) to another (the oxidant). These enzymes play a crucial role in various biological processes, including energy production, metabolism, and detoxification.

The oxidoreductase-catalyzed reaction typically involves the donation of electrons from a reducing agent (donor) to an oxidizing agent (acceptor), often through the transfer of hydrogen atoms or hydride ions. The enzyme itself does not undergo any permanent chemical change during this process, but rather acts as a catalyst to lower the activation energy required for the reaction to occur.

Oxidoreductases are classified and named based on the type of electron donor or acceptor involved in the reaction. For example, oxidoreductases that act on the CH-OH group of donors are called dehydrogenases, while those that act on the aldehyde or ketone groups are called oxidases. Other examples include reductases, peroxidases, and catalases.

Understanding the function and regulation of oxidoreductases is important for understanding various physiological processes and developing therapeutic strategies for diseases associated with impaired redox homeostasis, such as cancer, neurodegenerative disorders, and cardiovascular disease.

Bacteroidaceae is a family of gram-negative, anaerobic or facultatively anaerobic, non-spore forming bacteria that are commonly found in the human gastrointestinal tract. They are rod-shaped and can vary in size and shape. Bacteroidaceae are important breakdowners of complex carbohydrates and proteins in the gut, and play a significant role in maintaining the health and homeostasis of the intestinal microbiota. Some members of this family can also be opportunistic pathogens and have been associated with various infections and diseases, such as abscesses, bacteremia, and periodontal disease.

Denitrification is a microbial process that involves the reduction and conversion of nitrate (NO3-) or nitrite (NO2-) to gaseous forms of nitrogen, such as molecular nitrogen (N2) or nitrous oxide (N2O). This process occurs in anaerobic environments or in areas with low oxygen levels. It is a significant component of the nitrogen cycle and helps to regulate the amount of fixed nitrogen in the environment. Denitrification can also contribute to the degradation of certain pollutants, such as nitrate-contaminated water.

Cytochrome c1 is a protein that is a part of the electron transport chain in the inner mitochondrial membrane. It is a component of Complex III, also known as the cytochrome bc1 complex. Cytochrome c1 contains a heme group and plays a role in the transfer of electrons from ubiquinol to cytochrome c during oxidative phosphorylation, which is the process by which cells generate energy in the form of ATP. Defects in cytochrome c1 can lead to mitochondrial disorders and have been implicated in the development of certain diseases, such as neurodegenerative disorders and cancer.

Azurin is a small protein with a blue copper center, which is involved in electron transfer reactions. It is produced by the bacterium *Pseudomonas aeruginosa*, and has been studied for its potential role in wound healing and as an anticancer agent. The name "azurin" comes from the fact that this protein has a bright blue color due to its copper ion content.

Oxidation-Reduction (redox) reactions are a type of chemical reaction involving a transfer of electrons between two species. The substance that loses electrons in the reaction is oxidized, and the substance that gains electrons is reduced. Oxidation and reduction always occur together in a redox reaction, hence the term "oxidation-reduction."

In biological systems, redox reactions play a crucial role in many cellular processes, including energy production, metabolism, and signaling. The transfer of electrons in these reactions is often facilitated by specialized molecules called electron carriers, such as nicotinamide adenine dinucleotide (NAD+/NADH) and flavin adenine dinucleotide (FAD/FADH2).

The oxidation state of an element in a compound is a measure of the number of electrons that have been gained or lost relative to its neutral state. In redox reactions, the oxidation state of one or more elements changes as they gain or lose electrons. The substance that is oxidized has a higher oxidation state, while the substance that is reduced has a lower oxidation state.

Overall, oxidation-reduction reactions are fundamental to the functioning of living organisms and are involved in many important biological processes.

Cytochromes are a type of hemeprotein found in the mitochondria and other cellular membranes of organisms. They contain a heme group, which is a prosthetic group composed of an iron atom surrounded by a porphyrin ring. This structure allows cytochromes to participate in redox reactions, acting as electron carriers in various biological processes.

There are several types of cytochromes, classified based on the type of heme they contain and their absorption spectra. Some of the most well-known cytochromes include:

* Cytochrome c: a small, mobile protein found in the inner mitochondrial membrane that plays a crucial role in the electron transport chain during cellular respiration.
* Cytochrome P450: a large family of enzymes involved in the metabolism of drugs, toxins, and other xenobiotics. They are found in various tissues, including the liver, lungs, and skin.
* Cytochrome b: a component of several electron transport chains, including those found in mitochondria, bacteria, and chloroplasts.

Cytochromes play essential roles in energy production, detoxification, and other metabolic processes, making them vital for the survival and function of living organisms.

"Paracoccus" is not a medical term itself, but it is a genus name in the family of bacteria called "Paracoccaceae." The bacteria belonging to this genus are typically found in various environments such as soil, water, and sewage. Some species of Paracoccus have been reported to cause infections in humans, particularly in individuals with weakened immune systems. However, such infections are rare.

In a medical context, if a patient has an infection caused by a bacterium identified as Paracoccus, it would typically be described using the specific species name (e.g., Paracoccus yeei) and information about the site of infection, symptoms, and treatment approach.

Hydroxymethylglutaryl CoA (HMG-CoA) reductase is an enzyme that plays a crucial role in the synthesis of cholesterol in the body. It is found in the endoplasmic reticulum of cells and catalyzes the conversion of HMG-CoA to mevalonic acid, which is a key rate-limiting step in the cholesterol biosynthetic pathway.

The reaction catalyzed by HMG-CoA reductase is as follows:

HMG-CoA + 2 NADPH + 2 H+ → mevalonic acid + CoA + 2 NADP+

This enzyme is the target of statin drugs, which are commonly prescribed to lower cholesterol levels in the treatment of cardiovascular diseases. Statins work by inhibiting HMG-CoA reductase, thereby reducing the production of cholesterol in the body.

Heme is not a medical term per se, but it is a term used in the field of medicine and biology. Heme is a prosthetic group found in hemoproteins, which are proteins that contain a heme iron complex. This complex plays a crucial role in various biological processes, including oxygen transport (in hemoglobin), electron transfer (in cytochromes), and chemical catalysis (in peroxidases and catalases).

The heme group consists of an organic component called a porphyrin ring, which binds to a central iron atom. The iron atom can bind or release electrons, making it essential for redox reactions in the body. Heme is also vital for the formation of hemoglobin and myoglobin, proteins responsible for oxygen transport and storage in the blood and muscles, respectively.

In summary, heme is a complex organic-inorganic structure that plays a critical role in several biological processes, particularly in electron transfer and oxygen transport.

Ribonucleotide Reductases (RNRs) are enzymes that play a crucial role in DNA synthesis and repair. They catalyze the conversion of ribonucleotides to deoxyribonucleotides, which are the building blocks of DNA. This process involves the reduction of the 2'-hydroxyl group of the ribose sugar to a hydrogen, resulting in the formation of deoxyribose.

RNRs are highly regulated and exist in various forms across different species. They are divided into three classes (I, II, and III) based on their structure, mechanism, and cofactor requirements. Class I RNRs are further divided into two subclasses (Ia and Ib), which differ in their active site architecture and regulation.

Class Ia RNRs, found in eukaryotes and some bacteria, contain a stable tyrosyl radical that acts as the catalytic center for hydrogen abstraction. Class Ib RNRs, found in many bacteria, use a pair of iron centers to perform the same function. Class II RNRs are present in some bacteria and archaea and utilize adenosine triphosphate (ATP) as a cofactor for reduction. Class III RNRs, found in anaerobic bacteria and archaea, use a unique mechanism involving a radical S-adenosylmethionine (SAM) cofactor to facilitate the reduction reaction.

RNRs are essential for DNA replication and repair, and their dysregulation has been linked to various diseases, including cancer and neurodegenerative disorders. Therefore, understanding the structure, function, and regulation of RNRs is of great interest in biochemistry, molecular biology, and medicine.

Anaerobiosis is a state in which an organism or a portion of an organism is able to live and grow in the absence of molecular oxygen (O2). In biological contexts, "anaerobe" refers to any organism that does not require oxygen for growth, and "aerobe" refers to an organism that does require oxygen for growth.

There are two types of anaerobes: obligate anaerobes, which cannot tolerate the presence of oxygen and will die if exposed to it; and facultative anaerobes, which can grow with or without oxygen but prefer to grow in its absence. Some organisms are able to switch between aerobic and anaerobic metabolism depending on the availability of oxygen, a process known as "facultative anaerobiosis."

Anaerobic respiration is a type of metabolic process that occurs in the absence of molecular oxygen. In this process, organisms use alternative electron acceptors other than oxygen to generate energy through the transfer of electrons during cellular respiration. Examples of alternative electron acceptors include nitrate, sulfate, and carbon dioxide.

Anaerobic metabolism is less efficient than aerobic metabolism in terms of energy production, but it allows organisms to survive in environments where oxygen is not available or is toxic. Anaerobic bacteria are important decomposers in many ecosystems, breaking down organic matter and releasing nutrients back into the environment. In the human body, anaerobic bacteria can cause infections and other health problems if they proliferate in areas with low oxygen levels, such as the mouth, intestines, or deep tissue wounds.

Dithionite is a chemical compound with the formula Na2S2O4. It is also known as sodium hydrosulfite or sodium dithionite. Dithionite is a white crystalline solid that is highly soluble in water and is commonly used as a reducing agent in various industrial and laboratory applications, including the reduction of iron and copper salts, the bleaching of textiles and pulp, and the removal of sulfur dioxide from flue gases.

In medical contexts, dithionite may be used as a reducing agent in some pharmaceutical preparations or as an antidote for certain types of poisoning. However, it is important to note that dithionite can be toxic and corrosive in concentrated forms, and should be handled with care.

Nitric oxide (NO) is a molecule made up of one nitrogen atom and one oxygen atom. In the body, it is a crucial signaling molecule involved in various physiological processes such as vasodilation, immune response, neurotransmission, and inhibition of platelet aggregation. It is produced naturally by the enzyme nitric oxide synthase (NOS) from the amino acid L-arginine. Inhaled nitric oxide is used medically to treat pulmonary hypertension in newborns and adults, as it helps to relax and widen blood vessels, improving oxygenation and blood flow.

Copper is a chemical element with the symbol Cu (from Latin: *cuprum*) and atomic number 29. It is a soft, malleable, and ductile metal with very high thermal and electrical conductivity. Copper is found as a free element in nature, and it is also a constituent of many minerals such as chalcopyrite and bornite.

In the human body, copper is an essential trace element that plays a role in various physiological processes, including iron metabolism, energy production, antioxidant defense, and connective tissue synthesis. Copper is found in a variety of foods, such as shellfish, nuts, seeds, whole grains, and organ meats. The recommended daily intake of copper for adults is 900 micrograms (mcg) per day.

Copper deficiency can lead to anemia, neutropenia, impaired immune function, and abnormal bone development. Copper toxicity, on the other hand, can cause nausea, vomiting, abdominal pain, diarrhea, and in severe cases, liver damage and neurological symptoms. Therefore, it is important to maintain a balanced copper intake through diet and supplements if necessary.

The Electron Transport Chain (ETC) is a series of complexes in the inner mitochondrial membrane that are involved in the process of cellular respiration. It is the final pathway for electrons derived from the oxidation of nutrients such as glucose, fatty acids, and amino acids to be transferred to molecular oxygen. This transfer of electrons drives the generation of a proton gradient across the inner mitochondrial membrane, which is then used by ATP synthase to produce ATP, the main energy currency of the cell.

The electron transport chain consists of four complexes (I-IV) and two mobile electron carriers (ubiquinone and cytochrome c). Electrons from NADH and FADH2 are transferred to Complex I and Complex II respectively, which then pass them along to ubiquinone. Ubiquinone then transfers the electrons to Complex III, which passes them on to cytochrome c. Finally, cytochrome c transfers the electrons to Complex IV, where they combine with oxygen and protons to form water.

The transfer of electrons through the ETC is accompanied by the pumping of protons from the mitochondrial matrix to the intermembrane space, creating a proton gradient. The flow of protons back across the inner membrane through ATP synthase drives the synthesis of ATP from ADP and inorganic phosphate.

Overall, the electron transport chain is a crucial process for generating energy in the form of ATP in the cell, and it plays a key role in many metabolic pathways.

"Nitrosomonas europaea" is not a medical term, but rather a specific type of bacteria known as a nitrifying bacterium. It is commonly found in soil, freshwater, and wastewater environments. This bacterium plays a crucial role in the nitrogen cycle by converting ammonia into nitrites through a process called nitrification.

While not directly related to human health, Nitrosomonas europaea can have indirect effects on public health. For example, when present in wastewater treatment systems, it helps convert harmful ammonia into less toxic nitrite, which is then further converted into nitrate by other bacteria. This process helps protect aquatic environments from the negative impacts of excess nutrient pollution.

However, when nitrate accumulates in drinking water, it can pose health risks, particularly for infants under six months old, who may develop a condition called blue baby syndrome (methemoglobinemia) if exposed to high levels of nitrate. Therefore, monitoring and controlling nitrifying bacteria in wastewater treatment systems is essential to protect both the environment and public health.

"Paracoccus pantotrophus" is not a medical condition or disease. It is a species of bacteria that can be found in various environments, including water and soil. This bacterium is known for its ability to metabolize a wide range of organic and inorganic compounds, making it a "panotroph," or a generalist when it comes to nutrition.

While this bacterium is not typically associated with human disease, there have been some reports of infections caused by P. pantotrophus in people with weakened immune systems. However, such cases are rare and not well-studied. Therefore, it is not commonly included in medical definitions or textbooks.

Hydroxylamines are organic compounds that contain a hydroxy group (-OH) and an amino group (-NH2) in their structure. More specifically, they have the functional group R-N-OH, where R represents a carbon-containing radical. Hydroxylamines can be considered as derivatives of ammonia (NH3), where one hydrogen atom is replaced by a hydroxy group.

These compounds are important in organic chemistry and biochemistry due to their ability to act as reducing agents, nitrogen donors, and intermediates in various chemical reactions. They can be found in some natural substances and are also synthesized for use in pharmaceuticals, agrochemicals, and other industrial applications.

Examples of hydroxylamines include:

* Hydroxylamine (NH2OH) itself, which is a colorless liquid at room temperature with an odor similar to ammonia.
* N-Methylhydroxylamine (CH3NHOH), which is a solid that can be used as a reducing agent and a nucleophile in organic synthesis.
* Phenylhydroxylamine (C6H5NHOH), which is a solid used as an intermediate in the production of dyes, pharmaceuticals, and other chemicals.

It's important to note that hydroxylamines can be unstable and potentially hazardous, so they should be handled with care during laboratory work or industrial processes.

Spectrophotometry is a technical analytical method used in the field of medicine and science to measure the amount of light absorbed or transmitted by a substance at specific wavelengths. This technique involves the use of a spectrophotometer, an instrument that measures the intensity of light as it passes through a sample.

In medical applications, spectrophotometry is often used in laboratory settings to analyze various biological samples such as blood, urine, and tissues. For example, it can be used to measure the concentration of specific chemicals or compounds in a sample by measuring the amount of light that is absorbed or transmitted at specific wavelengths.

In addition, spectrophotometry can also be used to assess the properties of biological tissues, such as their optical density and thickness. This information can be useful in the diagnosis and treatment of various medical conditions, including skin disorders, eye diseases, and cancer.

Overall, spectrophotometry is a valuable tool for medical professionals and researchers seeking to understand the composition and properties of various biological samples and tissues.

Glutathione reductase (GR) is an enzyme that plays a crucial role in maintaining the cellular redox state. The primary function of GR is to reduce oxidized glutathione (GSSG) to its reduced form (GSH), which is an essential intracellular antioxidant. This enzyme utilizes nicotinamide adenine dinucleotide phosphate (NADPH) as a reducing agent in the reaction, converting it to NADP+. The medical definition of Glutathione Reductase is:

Glutathione reductase (GSR; EC 1.8.1.7) is a homodimeric flavoprotein that catalyzes the reduction of oxidized glutathione (GSSG) to reduced glutathione (GSH) in the presence of NADPH as a cofactor. This enzyme is essential for maintaining the cellular redox balance and protecting cells from oxidative stress by regenerating the active form of glutathione, a vital antioxidant and detoxifying agent.

Flavin Mononucleotide (FMN) Reductase is an enzyme that catalyzes the reduction of FMN to FMNH2 using NADH or NADPH as an electron donor. This enzyme plays a crucial role in the electron transport chain and is involved in various redox reactions within the cell. It is found in many organisms, including bacteria, fungi, plants, and animals. In humans, FMN Reductase is encoded by the RIBFLR gene and is primarily located in the mitochondria. Defects in this enzyme can lead to various metabolic disorders.

Thioredoxin-disulfide reductase (Txnrd, TrxR) is an enzyme that belongs to the pyridine nucleotide-disulfide oxidoreductase family. It plays a crucial role in maintaining the intracellular redox balance by reducing disulfide bonds in proteins and keeping them in their reduced state. This enzyme utilizes NADPH as an electron donor to reduce thioredoxin (Trx), which then transfers its electrons to various target proteins, thereby regulating their activity, protein folding, and antioxidant defense mechanisms.

Txnrd is essential for several cellular processes, including DNA synthesis, gene expression, signal transduction, and protection against oxidative stress. Dysregulation of Txnrd has been implicated in various pathological conditions, such as cancer, neurodegenerative diseases, and inflammatory disorders. Therefore, understanding the function and regulation of this enzyme is of great interest for developing novel therapeutic strategies.

Nitrous oxide, also known as laughing gas, is a colorless and non-flammable gas with a slightly sweet odor and taste. In medicine, it's commonly used for its anesthetic and pain reducing effects. It is often used in dental procedures, surgery, and childbirth to help reduce anxiety and provide mild sedation. Nitrous oxide works by binding to the hemoglobin in red blood cells, which reduces the oxygen-carrying capacity of the blood, but this effect is usually not significant at the low concentrations used for analgesia and anxiolysis. It's also considered relatively safe when administered by a trained medical professional because it does not cause depression of the respiratory system or cardiovascular function.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

NADPH-ferrihemoprotein reductase, also known as diaphorase or NO synthase reductase, is an enzyme that catalyzes the reduction of ferrihemoproteins using NADPH as a reducing cofactor. This reaction plays a crucial role in various biological processes such as the detoxification of certain compounds and the regulation of cellular signaling pathways.

The systematic name for this enzyme is NADPH:ferrihemoprotein oxidoreductase, and it belongs to the family of oxidoreductases that use NADH or NADPH as electron donors. The reaction catalyzed by this enzyme can be represented as follows:

NADPH + H+ + ferrihemoprotein ↔ NADP+ + ferrohemoprotein

In this reaction, the ferric (FeIII) form of hemoproteins is reduced to its ferrous (FeII) form by accepting electrons from NADPH. This enzyme is widely distributed in various tissues and organisms, including bacteria, fungi, plants, and animals. It has been identified as a component of several multi-enzyme complexes involved in different metabolic pathways, such as nitric oxide synthase (NOS) and cytochrome P450 reductase.

In summary, NADPH-ferrihemoprotein reductase is an essential enzyme that catalyzes the reduction of ferrihemoproteins using NADPH as a reducing agent, playing a critical role in various biological processes and metabolic pathways.

Ferredoxins are iron-sulfur proteins that play a crucial role in electron transfer reactions in various biological systems, particularly in photosynthesis and nitrogen fixation. They contain one or more clusters of iron and sulfur atoms (known as the iron-sulfur cluster) that facilitate the movement of electrons between different molecules during metabolic processes.

Ferredoxins have a relatively simple structure, consisting of a polypeptide chain that binds to the iron-sulfur cluster. This simple structure allows ferredoxins to participate in a wide range of redox reactions and makes them versatile electron carriers in biological systems. They can accept electrons from various donors and transfer them to different acceptors, depending on the needs of the cell.

In photosynthesis, ferredoxins play a critical role in the light-dependent reactions by accepting electrons from photosystem I and transferring them to NADP+, forming NADPH. This reduced form of nicotinamide adenine dinucleotide phosphate (NADPH) is then used in the Calvin cycle for carbon fixation and the production of glucose.

In nitrogen fixation, ferredoxins help transfer electrons to the nitrogenase enzyme complex, which reduces atmospheric nitrogen gas (N2) into ammonia (NH3), making it available for assimilation by plants and other organisms.

Overall, ferredoxins are essential components of many metabolic pathways, facilitating electron transfer and energy conversion in various biological systems.

Ferredoxin-NADP Reductase (FDNR) is an enzyme that catalyzes the electron transfer from ferredoxin to NADP+, reducing it to NADPH. This reaction plays a crucial role in several metabolic pathways, including photosynthesis and nitrogen fixation.

In photosynthesis, FDNR is located in the stroma of chloroplasts and receives electrons from ferredoxin, which is reduced by photosystem I. The enzyme then transfers these electrons to NADP+, generating NADPH, which is used in the Calvin cycle for carbon fixation.

In nitrogen fixation, FDNR is found in the nitrogen-fixing bacteria and receives electrons from ferredoxin, which is reduced by nitrogenase. The enzyme then transfers these electrons to NADP+, generating NADPH, which is used in the reduction of nitrogen gas (N2) to ammonia (NH3).

FDNR is a flavoprotein that contains a FAD cofactor and an iron-sulfur cluster. The enzyme catalyzes the electron transfer through a series of conformational changes that bring ferredoxin and NADP+ in close proximity, allowing for efficient electron transfer.

Hydroxylamine is not a medical term, but it is a chemical compound with the formula NH2OH. It's used in some industrial processes and can also be found as a byproduct of certain metabolic reactions in the body. In a medical context, exposure to high levels of hydroxylamine may cause irritation to the skin, eyes, and respiratory tract, and it may have harmful effects on the nervous system and blood if ingested or absorbed in large amounts. However, it is not a substance that is commonly encountered or monitored in medical settings.

I'm sorry for any confusion, but "Wolinella" is not a medical term or a specific condition in human medicine. It is actually the name of a genus of bacteria that are commonly found in the digestive tracts of animals, including humans. These bacteria are named after the Polish microbiologist Michaił Łaszkowski, whose last name was transcribed as "Wolin" in German scientific literature.

The bacteria in this genus are gram-negative, non-spore forming, and can be curved or spiral-shaped. They are often associated with gastrointestinal diseases in animals, but their role in human health and disease is not fully understood. Some research suggests that they may be involved in certain digestive disorders, such as inflammatory bowel disease, but more study is needed to confirm these associations and understand their significance.

Amyl nitrite is a volatile, light-colored liquid with an fruity or floral smell. It is a type of alkyl nitrite that is commonly used as a recreational drug, often inhaled for its ability to produce a brief sense of euphoria and relaxation, as well as to enhance sexual experiences.

In a medical setting, amyl nitrite has been used in the past as a vasodilator, a medication that widens blood vessels and improves circulation. It was traditionally used to treat angina pectoris, a type of chest pain caused by reduced blood flow to the heart muscle. However, its use in this context is now rare due to the availability of safer and more effective medications.

It's important to note that amyl nitrite can be dangerous if used improperly or in large quantities. It can cause a rapid and dangerous drop in blood pressure, which can lead to fainting, seizures, or even death in extreme cases. Additionally, the use of amyl nitrite can interact with certain medications, such as Viagra, and increase the risk of life-threatening side effects.

Electron Spin Resonance (ESR) Spectroscopy, also known as Electron Paramagnetic Resonance (EPR) Spectroscopy, is a technique used to investigate materials with unpaired electrons. It is based on the principle of absorption of energy by the unpaired electrons when they are exposed to an external magnetic field and microwave radiation.

In this technique, a sample is placed in a magnetic field and microwave radiation is applied. The unpaired electrons in the sample absorb energy and change their spin state when the energy of the microwaves matches the energy difference between the spin states. This absorption of energy is recorded as a function of the magnetic field strength, producing an ESR spectrum.

ESR spectroscopy can provide information about the number, type, and behavior of unpaired electrons in a sample, as well as the local environment around the electron. It is widely used in physics, chemistry, and biology to study materials such as free radicals, transition metal ions, and defects in solids.

Cytochrome c is a small protein that is involved in the electron transport chain, a key part of cellular respiration in which cells generate energy in the form of ATP. Cytochrome c contains a heme group, which binds to and transports electrons. The cytochrome c group refers to a class of related cytochromes that have similar structures and functions. These proteins are found in the mitochondria of eukaryotic cells (such as those of plants and animals) and in the inner membranes of bacteria. They play a crucial role in the production of energy within the cell, and are also involved in certain types of programmed cell death (apoptosis).

Cytochrome reductases are a group of enzymes that play a crucial role in the electron transport chain, a process that occurs in the mitochondria of cells and is responsible for generating energy in the form of ATP (adenosine triphosphate). Specifically, cytochrome reductases are responsible for transferring electrons from one component of the electron transport chain to another, specifically to cytochromes.

There are several types of cytochrome reductases, including NADH dehydrogenase (also known as Complex I), succinate dehydrogenase (also known as Complex II), and ubiquinone-cytochrome c reductase (also known as Complex III). These enzymes help to facilitate the flow of electrons through the electron transport chain, which is essential for the production of ATP and the maintenance of cellular homeostasis.

Defects in cytochrome reductases can lead to a variety of mitochondrial diseases, which can affect multiple organ systems and may be associated with symptoms such as muscle weakness, developmental delays, and cardiac dysfunction.

Ectothiorhodospiraceae is a family of purple sulfur bacteria, which are characterized by their ability to perform anoxygenic photosynthesis using bacteriochlorophyll a or b. These bacteria typically contain intracytoplasmic membranes and use reduced sulfur compounds as electron donors during photosynthesis. They are often found in hypersaline environments, such as salt lakes and salt pans, where they play an important role in the biogeochemical cycling of sulfur and carbon.

The name "Ectothiorhodospiraceae" comes from the Greek words "ectos," meaning outside, and "thio," meaning sulfur, and "spirillum," meaning a spiral-shaped bacterium. This reflects the fact that these bacteria form external sulfur deposits during photosynthesis.

It's worth noting that medical professionals may not necessarily be familiar with this term, as it is more commonly used in the fields of microbiology and environmental science.

Bacterial proteins are a type of protein that are produced by bacteria as part of their structural or functional components. These proteins can be involved in various cellular processes, such as metabolism, DNA replication, transcription, and translation. They can also play a role in bacterial pathogenesis, helping the bacteria to evade the host's immune system, acquire nutrients, and multiply within the host.

Bacterial proteins can be classified into different categories based on their function, such as:

1. Enzymes: Proteins that catalyze chemical reactions in the bacterial cell.
2. Structural proteins: Proteins that provide structural support and maintain the shape of the bacterial cell.
3. Signaling proteins: Proteins that help bacteria to communicate with each other and coordinate their behavior.
4. Transport proteins: Proteins that facilitate the movement of molecules across the bacterial cell membrane.
5. Toxins: Proteins that are produced by pathogenic bacteria to damage host cells and promote infection.
6. Surface proteins: Proteins that are located on the surface of the bacterial cell and interact with the environment or host cells.

Understanding the structure and function of bacterial proteins is important for developing new antibiotics, vaccines, and other therapeutic strategies to combat bacterial infections.

In the context of medicine and pharmacology, "kinetics" refers to the study of how a drug moves throughout the body, including its absorption, distribution, metabolism, and excretion (often abbreviated as ADME). This field is called "pharmacokinetics."

1. Absorption: This is the process of a drug moving from its site of administration into the bloodstream. Factors such as the route of administration (e.g., oral, intravenous, etc.), formulation, and individual physiological differences can affect absorption.

2. Distribution: Once a drug is in the bloodstream, it gets distributed throughout the body to various tissues and organs. This process is influenced by factors like blood flow, protein binding, and lipid solubility of the drug.

3. Metabolism: Drugs are often chemically modified in the body, typically in the liver, through processes known as metabolism. These changes can lead to the formation of active or inactive metabolites, which may then be further distributed, excreted, or undergo additional metabolic transformations.

4. Excretion: This is the process by which drugs and their metabolites are eliminated from the body, primarily through the kidneys (urine) and the liver (bile).

Understanding the kinetics of a drug is crucial for determining its optimal dosing regimen, potential interactions with other medications or foods, and any necessary adjustments for special populations like pediatric or geriatric patients, or those with impaired renal or hepatic function.

"Pseudomonas" is a genus of Gram-negative, rod-shaped bacteria that are widely found in soil, water, and plants. Some species of Pseudomonas can cause disease in animals and humans, with P. aeruginosa being the most clinically relevant as it's an opportunistic pathogen capable of causing various types of infections, particularly in individuals with weakened immune systems.

P. aeruginosa is known for its remarkable ability to resist many antibiotics and disinfectants, making infections caused by this bacterium difficult to treat. It can cause a range of healthcare-associated infections, such as pneumonia, bloodstream infections, urinary tract infections, and surgical site infections. In addition, it can also cause external ear infections and eye infections.

Prompt identification and appropriate antimicrobial therapy are crucial for managing Pseudomonas infections, although the increasing antibiotic resistance poses a significant challenge in treatment.

Aerobiosis is the process of living, growing, and functioning in the presence of oxygen. It refers to the metabolic processes that require oxygen to break down nutrients and produce energy in cells. This is in contrast to anaerobiosis, which is the ability to live and grow in the absence of oxygen.

In medical terms, aerobiosis is often used to describe the growth of microorganisms, such as bacteria and fungi, that require oxygen to survive and multiply. These organisms are called aerobic organisms, and they play an important role in many biological processes, including decomposition and waste breakdown.

However, some microorganisms are unable to grow in the presence of oxygen and are instead restricted to environments where oxygen is absent or limited. These organisms are called anaerobic organisms, and their growth and metabolism are referred to as anaerobiosis.

An amino acid sequence is the specific order of amino acids in a protein or peptide molecule, formed by the linking of the amino group (-NH2) of one amino acid to the carboxyl group (-COOH) of another amino acid through a peptide bond. The sequence is determined by the genetic code and is unique to each type of protein or peptide. It plays a crucial role in determining the three-dimensional structure and function of proteins.

A bacterial gene is a segment of DNA (or RNA in some viruses) that contains the genetic information necessary for the synthesis of a functional bacterial protein or RNA molecule. These genes are responsible for encoding various characteristics and functions of bacteria such as metabolism, reproduction, and resistance to antibiotics. They can be transmitted between bacteria through horizontal gene transfer mechanisms like conjugation, transformation, and transduction. Bacterial genes are often organized into operons, which are clusters of genes that are transcribed together as a single mRNA molecule.

It's important to note that the term "bacterial gene" is used to describe genetic elements found in bacteria, but not all genetic elements in bacteria are considered genes. For example, some DNA sequences may not encode functional products and are therefore not considered genes. Additionally, some bacterial genes may be plasmid-borne or phage-borne, rather than being located on the bacterial chromosome.

I'm sorry for any confusion, but "Hyphomicrobium" is not a medical term. It is a genus name in the bacterial kingdom, specifically within the class Betaproteobacteria. These are typically aerobic, motile bacteria that are often found in soil and water environments. They play a role in various biogeochemical processes such as denitrification and carbon cycling. If you have any questions related to biological or environmental sciences, I'd be happy to help with those!

Electron Transport Complex IV is also known as Cytochrome c oxidase. It is the last complex in the electron transport chain, located in the inner mitochondrial membrane of eukaryotic cells and the plasma membrane of prokaryotic cells. This complex contains 13 subunits, two heme groups (a and a3), and three copper centers (A, B, and C).

In the electron transport chain, Complex IV receives electrons from cytochrome c and transfers them to molecular oxygen, reducing it to water. This process is accompanied by the pumping of protons across the membrane, contributing to the generation of a proton gradient that drives ATP synthesis via ATP synthase (Complex V). The overall reaction catalyzed by Complex IV can be summarized as follows:

4e- + 4H+ + O2 → 2H2O

Defects in Cytochrome c oxidase can lead to various diseases, including mitochondrial encephalomyopathies and neurodegenerative disorders.

"Pseudomonas aeruginosa" is a medically important, gram-negative, rod-shaped bacterium that is widely found in the environment, such as in soil, water, and on plants. It's an opportunistic pathogen, meaning it usually doesn't cause infection in healthy individuals but can cause severe and sometimes life-threatening infections in people with weakened immune systems, burns, or chronic lung diseases like cystic fibrosis.

P. aeruginosa is known for its remarkable ability to resist many antibiotics and disinfectants due to its intrinsic resistance mechanisms and the acquisition of additional resistance determinants. It can cause various types of infections, including respiratory tract infections, urinary tract infections, gastrointestinal infections, dermatitis, and severe bloodstream infections known as sepsis.

The bacterium produces a variety of virulence factors that contribute to its pathogenicity, such as exotoxins, proteases, and pigments like pyocyanin and pyoverdine, which aid in iron acquisition and help the organism evade host immune responses. Effective infection control measures, appropriate use of antibiotics, and close monitoring of high-risk patients are crucial for managing P. aeruginosa infections.

"Ralstonia pickettii" is a species of gram-negative, aerobic bacteria that is commonly found in various environments such as soil, water, and clinical settings. It is a non-motile, rod-shaped bacterium that can form biofilms and is resistant to many disinfectants. "Ralstonia pickettii" has been associated with healthcare-associated infections, particularly in immunocompromised patients, and has been isolated from respiratory secretions, blood, and urine samples. It can cause a range of clinical manifestations, including pneumonia, bacteremia, and urinary tract infections. Proper identification and implementation of infection control measures are crucial to prevent the spread of this organism in healthcare settings.

"Paracoccus denitrificans" is not a medical term, but rather a term used in the field of microbiology. It refers to a species of gram-negative, facultatively anaerobic bacteria that are commonly found in soil and water environments. These bacteria are known for their ability to carry out denitrification, which is the process of converting nitrate (NO3-) to nitrogen gas (N2) under anaerobic conditions. This ability makes them important players in the global nitrogen cycle.

While "Paracoccus denitrificans" itself is not a medical term, certain strains of this bacterium have been used in medical research and biotechnology applications. For example, some researchers have studied the use of "Paracoccus denitrificans" as a potential agent for removing nitrogenous compounds from wastewater or for producing hydrogen gas through fermentation. However, there is no direct medical relevance to this bacterium in terms of human health or disease.

'Escherichia coli' (E. coli) is a type of gram-negative, facultatively anaerobic, rod-shaped bacterium that commonly inhabits the intestinal tract of humans and warm-blooded animals. It is a member of the family Enterobacteriaceae and one of the most well-studied prokaryotic model organisms in molecular biology.

While most E. coli strains are harmless and even beneficial to their hosts, some serotypes can cause various forms of gastrointestinal and extraintestinal illnesses in humans and animals. These pathogenic strains possess virulence factors that enable them to colonize and damage host tissues, leading to diseases such as diarrhea, urinary tract infections, pneumonia, and sepsis.

E. coli is a versatile organism with remarkable genetic diversity, which allows it to adapt to various environmental niches. It can be found in water, soil, food, and various man-made environments, making it an essential indicator of fecal contamination and a common cause of foodborne illnesses. The study of E. coli has contributed significantly to our understanding of fundamental biological processes, including DNA replication, gene regulation, and protein synthesis.

Tetrahydrofolate dehydrogenase (EC 1.5.1.20) is an enzyme involved in folate metabolism. The enzyme catalyzes the oxidation of tetrahydrofolate (THF) to dihydrofolate (DHF), while simultaneously reducing NADP+ to NADPH.

The reaction can be summarized as follows:

THF + NADP+ -> DHF + NADPH + H+

This enzyme plays a crucial role in the synthesis of purines and thymidylate, which are essential components of DNA and RNA. Therefore, any defects or deficiencies in tetrahydrofolate dehydrogenase can lead to various medical conditions, including megaloblastic anemia and neural tube defects during fetal development.

'Desulfovibrio' is a genus of bacteria that are commonly found in various environments such as soil, water, and the gastrointestinal tracts of animals. These bacteria are gram-negative, curved or spiral-shaped, and can reduce sulfate to produce hydrogen sulfide, which gives them their name ('desulfuricate' means 'to remove sulfur'). Some species of Desulfovibrio have been associated with various human diseases, including inflammatory bowel disease and dental caries. However, more research is needed to fully understand the role that these bacteria play in human health and disease.

"Nitrosomonas" is a genus of Gram-negative, aerobic bacteria that are capable of oxidizing ammonia to nitrite as part of the nitrogen cycle. These bacteria play a crucial role in nitrification, a process that converts harmful ammonia into less toxic forms. They are commonly found in various environments such as soil, freshwater, and oceans, where they help maintain nutrient balance. The genus "Nitrosomonas" belongs to the family Methylocystaceae within the class Alphaproteobacteria. It's important to note that while these bacteria have medical relevance in understanding environmental and ecological systems, they are not typically associated with human diseases or infections.

Oxidoreductases acting on sulfur group donors are a class of enzymes that catalyze redox reactions involving sulfur group donors. These enzymes play a crucial role in various biological processes, such as the metabolism of sulfur-containing compounds and the detoxification of xenobiotics.

The term "oxidoreductase" refers to any enzyme that catalyzes an oxidation-reduction reaction, where one molecule is oxidized (loses electrons) and another is reduced (gains electrons). In the case of oxidoreductases acting on sulfur group donors, the sulfur atom in the substrate serves as the electron donor.

The systematic name for this class of enzymes follows a specific format: "donor:acceptor oxidoreductase." The donor is the sulfur-containing compound that donates electrons, and the acceptor is the molecule that accepts the electrons. For example, the enzyme that catalyzes the reaction between glutathione (GSH) and a variety of electrophiles is called glutathione transferase, or GST (donor:acceptor oxidoreductase).

These enzymes are further classified into subclasses based on the type of acceptor involved in the reaction. Examples include:

* EC 1.8.1: Oxidoreductases acting on CH-NH2 group donors
* EC 1.8.3: Oxidoreductases acting on CH or CH2 groups
* EC 1.8.4: Oxidoreductases acting on the CH-CH group of donors
* EC 1.8.5: Oxidoreductases acting on a sulfur group of donors
* EC 1.8.6: Oxidoreductases acting on NADH or NADPH

The subclass EC 1.8.5, oxidoreductases acting on a sulfur group of donors, includes enzymes that catalyze redox reactions involving sulfur-containing compounds such as thiols (compounds containing -SH groups), disulfides (-S-S- bonds), and other sulfur-containing functional groups. These enzymes play crucial roles in various biological processes, including detoxification, antioxidant defense, and redox regulation.

Nitrogen is not typically referred to as a medical term, but it is an element that is crucial to medicine and human life.

In a medical context, nitrogen is often mentioned in relation to gas analysis, respiratory therapy, or medical gases. Nitrogen (N) is a colorless, odorless, and nonreactive gas that makes up about 78% of the Earth's atmosphere. It is an essential element for various biological processes, such as the growth and maintenance of organisms, because it is a key component of amino acids, nucleic acids, and other organic compounds.

In some medical applications, nitrogen is used to displace oxygen in a mixture to create a controlled environment with reduced oxygen levels (hypoxic conditions) for therapeutic purposes, such as in certain types of hyperbaric chambers. Additionally, nitrogen gas is sometimes used in cryotherapy, where extremely low temperatures are applied to tissues to reduce pain, swelling, and inflammation.

However, it's important to note that breathing pure nitrogen can be dangerous, as it can lead to unconsciousness and even death due to lack of oxygen (asphyxiation) within minutes.

Gene expression regulation in bacteria refers to the complex cellular processes that control the production of proteins from specific genes. This regulation allows bacteria to adapt to changing environmental conditions and ensure the appropriate amount of protein is produced at the right time.

Bacteria have a variety of mechanisms for regulating gene expression, including:

1. Operon structure: Many bacterial genes are organized into operons, which are clusters of genes that are transcribed together as a single mRNA molecule. The expression of these genes can be coordinately regulated by controlling the transcription of the entire operon.
2. Promoter regulation: Transcription is initiated at promoter regions upstream of the gene or operon. Bacteria have regulatory proteins called sigma factors that bind to the promoter and recruit RNA polymerase, the enzyme responsible for transcribing DNA into RNA. The binding of sigma factors can be influenced by environmental signals, allowing for regulation of transcription.
3. Attenuation: Some operons have regulatory regions called attenuators that control transcription termination. These regions contain hairpin structures that can form in the mRNA and cause transcription to stop prematurely. The formation of these hairpins is influenced by the concentration of specific metabolites, allowing for regulation of gene expression based on the availability of those metabolites.
4. Riboswitches: Some bacterial mRNAs contain regulatory elements called riboswitches that bind small molecules directly. When a small molecule binds to the riboswitch, it changes conformation and affects transcription or translation of the associated gene.
5. CRISPR-Cas systems: Bacteria use CRISPR-Cas systems for adaptive immunity against viruses and plasmids. These systems incorporate short sequences from foreign DNA into their own genome, which can then be used to recognize and cleave similar sequences in invading genetic elements.

Overall, gene expression regulation in bacteria is a complex process that allows them to respond quickly and efficiently to changing environmental conditions. Understanding these regulatory mechanisms can provide insights into bacterial physiology and help inform strategies for controlling bacterial growth and behavior.

Quaternary ammonium compounds (QACs) are a group of disinfectants and antiseptics that contain a nitrogen atom surrounded by four organic groups, resulting in a charged "quat" structure. They are widely used in healthcare settings due to their broad-spectrum activity against bacteria, viruses, fungi, and spores. QACs work by disrupting the cell membrane of microorganisms, leading to their death. Common examples include benzalkonium chloride and cetyltrimethylammonium bromide. It is important to note that some microorganisms have developed resistance to QACs, and they may not be effective against all types of pathogens.

*Achromobacter denitrificans* is a gram-negative, aerobic, rod-shaped bacterium that is commonly found in various environments such as soil, water, and clinical samples. It is known for its ability to denitrify, which means it can convert nitrates to nitrogen gas under anaerobic conditions. This bacterium is generally considered to be non-pathogenic, but there have been rare cases of infections associated with *Achromobacter denitrificans* in immunocompromised individuals.

The medical definition of *Achromobacter denitrificans* would refer to its identification and classification as a bacterium, along with its potential role in certain types of infections. However, it is important to note that this organism is not typically associated with specific diseases or medical conditions, and its presence in clinical samples may simply reflect environmental contamination or colonization rather than active infection.

A base sequence in the context of molecular biology refers to the specific order of nucleotides in a DNA or RNA molecule. In DNA, these nucleotides are adenine (A), guanine (G), cytosine (C), and thymine (T). In RNA, uracil (U) takes the place of thymine. The base sequence contains genetic information that is transcribed into RNA and ultimately translated into proteins. It is the exact order of these bases that determines the genetic code and thus the function of the DNA or RNA molecule.

Benzyl viologen is a type of chemical compound that belongs to the class of viologens, which are derivatives of the parent compound methylviologen. The chemical name for benzyl viologen is N,N'-diphenyl-4,4'-bipyridinium dichloride.

Viologens are reduced forms of heterocyclic aromatic amines that can undergo reversible reduction and oxidation reactions. In their reduced form, they act as strong reducing agents, while in their oxidized form, they act as strong oxidizing agents. Benzyl viologen is commonly used as an electron carrier or mediator in various chemical and biological systems, such as redox reactions, photochemical processes, and bioelectrochemical devices like fuel cells and biosensors.

The compound consists of two benzyl groups attached to the nitrogen atoms of a bipyridinium cation, which is then complexed with chloride ions. The reduction potential of benzyl viologen is around -0.45 V vs. standard hydrogen electrode (SHE), making it a useful electron carrier in various applications where an easily reducible and oxidizable compound is required.

It's worth noting that while benzyl viologen has potential uses in scientific research, it may also have toxic effects on living organisms, so appropriate safety precautions should be taken when handling this chemical.

Ammonia is a colorless, pungent-smelling gas with the chemical formula NH3. It is a compound of nitrogen and hydrogen and is a basic compound, meaning it has a pH greater than 7. Ammonia is naturally found in the environment and is produced by the breakdown of organic matter, such as animal waste and decomposing plants. In the medical field, ammonia is most commonly discussed in relation to its role in human metabolism and its potential toxicity.

In the body, ammonia is produced as a byproduct of protein metabolism and is typically converted to urea in the liver and excreted in the urine. However, if the liver is not functioning properly or if there is an excess of protein in the diet, ammonia can accumulate in the blood and cause a condition called hyperammonemia. Hyperammonemia can lead to serious neurological symptoms, such as confusion, seizures, and coma, and is treated by lowering the level of ammonia in the blood through medications, dietary changes, and dialysis.

I'm sorry for any confusion, but "spectrum analysis" is not a commonly used medical term. Spectrum analysis is a term that is more frequently used in the fields of physics, mathematics, and engineering to describe the process of breaking down a signal or a wave into its different frequencies and amplitudes, creating a visual representation called a spectrum.

If you have any concerns about a medical issue, I would recommend consulting with a healthcare professional for accurate information and guidance.

NADP (Nicotinamide Adenine Dinucleotide Phosphate) is a coenzyme that plays a crucial role as an electron carrier in various redox reactions in the human body. It exists in two forms: NADP+, which functions as an oxidizing agent and accepts electrons, and NADPH, which serves as a reducing agent and donates electrons.

NADPH is particularly important in anabolic processes, such as lipid and nucleotide synthesis, where it provides the necessary reducing equivalents to drive these reactions forward. It also plays a critical role in maintaining the cellular redox balance by participating in antioxidant defense mechanisms that neutralize harmful reactive oxygen species (ROS).

In addition, NADP is involved in various metabolic pathways, including the pentose phosphate pathway and the Calvin cycle in photosynthesis. Overall, NADP and its reduced form, NADPH, are essential molecules for maintaining proper cellular function and energy homeostasis.

Iron-sulfur proteins are a group of metalloproteins that contain iron and sulfur atoms in their active centers. These clusters of iron and sulfur atoms, also known as iron-sulfur clusters, can exist in various forms, including Fe-S, 2Fe-2S, 3Fe-4S, and 4Fe-4S structures. The iron atoms are coordinated to the protein through cysteine residues, while the sulfur atoms can be in the form of sulfide (S2-) or sulfane (-S-).

These proteins play crucial roles in many biological processes, such as electron transfer, redox reactions, and enzyme catalysis. They are found in various organisms, from bacteria to humans, and are involved in a wide range of cellular functions, including energy metabolism, photosynthesis, nitrogen fixation, and DNA repair.

Iron-sulfur proteins can be classified into several categories based on their structure and function, such as ferredoxins, Rieske proteins, high-potential iron-sulfur proteins (HiPIPs), and radical SAM enzymes. Dysregulation or mutations in iron-sulfur protein genes have been linked to various human diseases, including neurodegenerative disorders, cancer, and mitochondrial disorders.

Pulse radiolysis is not a medical term, but rather a technique used in physical chemistry and radiation biology. It involves the use of short, intense pulses of ionizing radiation to induce chemical reactions in matter, which are then studied using fast spectroscopic techniques to observe the formation and decay of transient species.

In the context of medical research, pulse radiolysis can be used to study the mechanisms of radiation damage to biological molecules such as DNA, proteins, and lipids, which is relevant for understanding the biological effects of ionizing radiation in cancer therapy and radiation protection.

Sulfites are a group of chemical compounds that contain the sulfite ion (SO3−2), which consists of one sulfur atom and three oxygen atoms. In medical terms, sulfites are often used as food additives or preservatives, serving to prevent bacterial growth and preserve the color of certain foods and drinks.

Sulfites can be found naturally in some foods, such as wine, dried fruits, and vegetables, but they are also added to a variety of processed products like potato chips, beer, and soft drinks. While sulfites are generally considered safe for most people, they can cause adverse reactions in some individuals, particularly those with asthma or a sensitivity to sulfites.

In the medical field, sulfites may also be used as medications to treat certain conditions. For example, they may be used as a vasodilator to widen blood vessels and improve blood flow during heart surgery or as an antimicrobial agent in some eye drops. However, their use as a medication is relatively limited due to the potential for adverse reactions.

Heme proteins are a type of protein that contain a heme group, which is a prosthetic group composed of an iron atom contained in the center of a large organic ring called a porphyrin. The heme group gives these proteins their characteristic red color. Hemeproteins have various important functions in biological systems, including oxygen transport (e.g., hemoglobin), electron transfer (e.g., cytochromes), and enzymatic catalysis (e.g., peroxidases and catalases). The heme group can bind and release gases, such as oxygen and carbon monoxide, and can participate in redox reactions due to the ease with which iron can change its oxidation state.

Methionine sulfoxide reductases (MSRs) are a group of enzymes that catalyze the reduction of methionine sulfoxides back to methionine in proteins. Methionine residues in proteins can be oxidized by reactive oxygen species (ROS) or other oxidizing agents, leading to the formation of methionine sulfoxide. This modification can affect protein function and stability. MSRs play a crucial role in protecting proteins from oxidative damage and maintaining their proper function.

There are two types of MSRs, designated as MSRA and MSRB. MSRA reduces methionine-S-sulfoxides, while MSRB reduces methionine-R-sulfoxides. Both enzymes require the cofactor thioredoxin to reduce the methionine sulfoxide back to methionine. The activity of MSRs is important in various biological processes, including protein folding, stress response, and aging. Defects in MSRs have been implicated in several diseases, such as Alzheimer's disease, Parkinson's disease, and cancer.

Hydroxymethylglutaryl-CoA (HMG-CoA) reductase inhibitors, also known as statins, are a class of cholesterol-lowering medications. They work by inhibiting the enzyme HMG-CoA reductase, which plays a central role in the production of cholesterol in the liver. By blocking this enzyme, the liver is stimulated to take up more low-density lipoprotein (LDL) cholesterol from the bloodstream, leading to a decrease in LDL cholesterol levels and a reduced risk of cardiovascular disease.

Examples of HMG-CoA reductase inhibitors include atorvastatin, simvastatin, pravastatin, rosuvastatin, and fluvastatin. These medications are commonly prescribed to individuals with high cholesterol levels, particularly those who are at risk for or have established cardiovascular disease.

It's important to note that while HMG-CoA reductase inhibitors can be effective in reducing LDL cholesterol levels and the risk of cardiovascular events, they should be used as part of a comprehensive approach to managing high cholesterol, which may also include lifestyle modifications such as dietary changes, exercise, and weight management.

Ribonucleoside Diphosphate Reductase (RNR) is an enzyme that plays a crucial role in the regulation of DNA synthesis and repair. It catalyzes the conversion of ribonucleoside diphosphates (NDPs) to deoxyribonucleoside diphosphates (dNDPs), which are the building blocks of DNA. This reaction is essential for the synthesis of new DNA strands during replication and repair processes. The enzyme's activity is tightly regulated, as it must be carefully controlled to prevent errors in DNA synthesis that could lead to mutations and genomic instability. RNR is a target for chemotherapeutic agents due to its essential role in DNA synthesis.

A mutation is a permanent change in the DNA sequence of an organism's genome. Mutations can occur spontaneously or be caused by environmental factors such as exposure to radiation, chemicals, or viruses. They may have various effects on the organism, ranging from benign to harmful, depending on where they occur and whether they alter the function of essential proteins. In some cases, mutations can increase an individual's susceptibility to certain diseases or disorders, while in others, they may confer a survival advantage. Mutations are the driving force behind evolution, as they introduce new genetic variability into populations, which can then be acted upon by natural selection.

In the context of medical and biological sciences, a "binding site" refers to a specific location on a protein, molecule, or cell where another molecule can attach or bind. This binding interaction can lead to various functional changes in the original protein or molecule. The other molecule that binds to the binding site is often referred to as a ligand, which can be a small molecule, ion, or even another protein.

The binding between a ligand and its target binding site can be specific and selective, meaning that only certain ligands can bind to particular binding sites with high affinity. This specificity plays a crucial role in various biological processes, such as signal transduction, enzyme catalysis, or drug action.

In the case of drug development, understanding the location and properties of binding sites on target proteins is essential for designing drugs that can selectively bind to these sites and modulate protein function. This knowledge can help create more effective and safer therapeutic options for various diseases.

Sequence homology, amino acid, refers to the similarity in the order of amino acids in a protein or a portion of a protein between two or more species. This similarity can be used to infer evolutionary relationships and functional similarities between proteins. The higher the degree of sequence homology, the more likely it is that the proteins are related and have similar functions. Sequence homology can be determined through various methods such as pairwise alignment or multiple sequence alignment, which compare the sequences and calculate a score based on the number and type of matching amino acids.

Hydrogen-ion concentration, also known as pH, is a measure of the acidity or basicity of a solution. It is defined as the negative logarithm (to the base 10) of the hydrogen ion activity in a solution. The standard unit of measurement is the pH unit. A pH of 7 is neutral, less than 7 is acidic, and greater than 7 is basic.

In medical terms, hydrogen-ion concentration is important for maintaining homeostasis within the body. For example, in the stomach, a high hydrogen-ion concentration (low pH) is necessary for the digestion of food. However, in other parts of the body such as blood, a high hydrogen-ion concentration can be harmful and lead to acidosis. Conversely, a low hydrogen-ion concentration (high pH) in the blood can lead to alkalosis. Both acidosis and alkalosis can have serious consequences on various organ systems if not corrected.

Dihydropteridine reductase is an enzyme that plays a crucial role in the metabolism of certain amino acids, specifically phenylalanine and tyrosine. This enzyme is responsible for reducing dihydropteridines to tetrahydropteridines, which is a necessary step in the regeneration of tetrahydrobiopterin (BH4), an essential cofactor for the enzymes phenylalanine hydroxylase and tyrosine hydroxylase.

Phenylalanine hydroxylase and tyrosine hydroxylase are involved in the conversion of the amino acids phenylalanine and tyrosine to tyrosine and dopa, respectively. Without sufficient BH4, these enzymes cannot function properly, leading to an accumulation of phenylalanine and a decrease in the levels of important neurotransmitters such as dopamine, norepinephrine, and serotonin.

Deficiency in dihydropteridine reductase can lead to a rare genetic disorder known as dihydropteridine reductase deficiency (DPRD), which is characterized by elevated levels of phenylalanine and neurotransmitter imbalances, resulting in neurological symptoms such as developmental delay, seizures, and hypotonia. Treatment typically involves a low-phenylalanine diet and supplementation with BH4.

Cytochrome c2 is a type of cytochrome, which is a small water-soluble protein involved in electron transport chains and associated with the inner membrane of mitochondria. Cytochrome c2 specifically contains heme as a cofactor and plays a role in the respiratory chain of certain bacteria, contributing to their energy production through oxidative phosphorylation. It is not found in human or mammalian cells.

Rhodobacter sphaeroides is not a medical term, but rather a scientific name for a type of bacteria. It belongs to the class of proteobacteria and is commonly found in soil, fresh water, and the ocean. This bacterium is capable of photosynthesis, and it can use light as an energy source, converting it into chemical energy. Rhodobacter sphaeroides is often studied in research settings due to its unique metabolic capabilities and potential applications in biotechnology.

In a medical context, Rhodobacter sphaeroides may be mentioned in relation to rare cases of infection, particularly in individuals with weakened immune systems. However, it is not considered a significant human pathogen, and there are no specific medical definitions associated with this bacterium.

Oxygen is a colorless, odorless, tasteless gas that constitutes about 21% of the earth's atmosphere. It is a crucial element for human and most living organisms as it is vital for respiration. Inhaled oxygen enters the lungs and binds to hemoglobin in red blood cells, which carries it to tissues throughout the body where it is used to convert nutrients into energy and carbon dioxide, a waste product that is exhaled.

Medically, supplemental oxygen therapy may be provided to patients with conditions such as chronic obstructive pulmonary disease (COPD), pneumonia, heart failure, or other medical conditions that impair the body's ability to extract sufficient oxygen from the air. Oxygen can be administered through various devices, including nasal cannulas, face masks, and ventilators.

Molecular cloning is a laboratory technique used to create multiple copies of a specific DNA sequence. This process involves several steps:

1. Isolation: The first step in molecular cloning is to isolate the DNA sequence of interest from the rest of the genomic DNA. This can be done using various methods such as PCR (polymerase chain reaction), restriction enzymes, or hybridization.
2. Vector construction: Once the DNA sequence of interest has been isolated, it must be inserted into a vector, which is a small circular DNA molecule that can replicate independently in a host cell. Common vectors used in molecular cloning include plasmids and phages.
3. Transformation: The constructed vector is then introduced into a host cell, usually a bacterial or yeast cell, through a process called transformation. This can be done using various methods such as electroporation or chemical transformation.
4. Selection: After transformation, the host cells are grown in selective media that allow only those cells containing the vector to grow. This ensures that the DNA sequence of interest has been successfully cloned into the vector.
5. Amplification: Once the host cells have been selected, they can be grown in large quantities to amplify the number of copies of the cloned DNA sequence.

Molecular cloning is a powerful tool in molecular biology and has numerous applications, including the production of recombinant proteins, gene therapy, functional analysis of genes, and genetic engineering.

Quinone reductases are a group of enzymes that catalyze the reduction of quinones to hydroquinones, using NADH or NADPH as an electron donor. This reaction is important in the detoxification of quinones, which are potentially toxic compounds produced during the metabolism of certain drugs, chemicals, and endogenous substances.

There are two main types of quinone reductases: NQO1 (NAD(P)H:quinone oxidoreductase 1) and NQO2 (NAD(P)H:quinone oxidoreductase 2). NQO1 is a cytosolic enzyme that can reduce a wide range of quinones, while NQO2 is a mitochondrial enzyme with a narrower substrate specificity.

Quinone reductases have been studied for their potential role in cancer prevention and treatment, as they may help to protect cells from oxidative stress and DNA damage caused by quinones and other toxic compounds. Additionally, some quinone reductase inhibitors have been developed as chemotherapeutic agents, as they can enhance the cytotoxicity of certain drugs that require quinone reduction for activation.

Metalloproteins are proteins that contain one or more metal ions as a cofactor, which is required for their biological activity. These metal ions play crucial roles in the catalytic function, structural stability, and electron transfer processes of metalloproteins. The types of metals involved can include iron, zinc, copper, magnesium, calcium, or manganese, among others. Examples of metalloproteins are hemoglobin (contains heme-bound iron), cytochrome c (contains heme-bound iron and functions in electron transfer), and carbonic anhydrase (contains zinc and catalyzes the conversion between carbon dioxide and bicarbonate).

DNA Sequence Analysis is the systematic determination of the order of nucleotides in a DNA molecule. It is a critical component of modern molecular biology, genetics, and genetic engineering. The process involves determining the exact order of the four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - in a DNA molecule or fragment. This information is used in various applications such as identifying gene mutations, studying evolutionary relationships, developing molecular markers for breeding, and diagnosing genetic diseases.

The process of DNA Sequence Analysis typically involves several steps, including DNA extraction, PCR amplification (if necessary), purification, sequencing reaction, and electrophoresis. The resulting data is then analyzed using specialized software to determine the exact sequence of nucleotides.

In recent years, high-throughput DNA sequencing technologies have revolutionized the field of genomics, enabling the rapid and cost-effective sequencing of entire genomes. This has led to an explosion of genomic data and new insights into the genetic basis of many diseases and traits.

An electron is a subatomic particle, symbol e-, with a negative electric charge. Electrons are fundamental components of atoms and are responsible for the chemical bonding between atoms to form molecules. They are located in an atom's electron cloud, which is the outermost region of an atom and contains negatively charged electrons that surround the positively charged nucleus.

Electrons have a mass that is much smaller than that of protons or neutrons, making them virtually weightless on the atomic scale. They are also known to exhibit both particle-like and wave-like properties, which is a fundamental concept in quantum mechanics. Electrons play a crucial role in various physical phenomena, such as electricity, magnetism, and chemical reactions.

Thiosulfates are salts or esters of thiosulfuric acid (H2S2O3). In medicine, sodium thiosulfate is used as an antidote for cyanide poisoning and as a topical treatment for wounds, skin irritations, and certain types of burns. It works by converting toxic substances into less harmful forms that can be eliminated from the body. Sodium thiosulfate is also used in some solutions for irrigation of the bladder or kidneys to help prevent the formation of calcium oxalate stones.

Alcohol oxidoreductases are a class of enzymes that catalyze the oxidation of alcohols to aldehydes or ketones, while reducing nicotinamide adenine dinucleotide (NAD+) to NADH. These enzymes play an important role in the metabolism of alcohols and other organic compounds in living organisms.

The most well-known example of an alcohol oxidoreductase is alcohol dehydrogenase (ADH), which is responsible for the oxidation of ethanol to acetaldehyde in the liver during the metabolism of alcoholic beverages. Other examples include aldehyde dehydrogenases (ALDH) and sorbitol dehydrogenase (SDH).

These enzymes are important targets for the development of drugs used to treat alcohol use disorder, as inhibiting their activity can help to reduce the rate of ethanol metabolism and the severity of its effects on the body.

Simazine is a herbicide, specifically a triazine compound. According to the medical definitions provided by MedlinePlus, a service of the US National Library of Medicine, simazine is used to control broadleaf weeds and grasses in various settings such as agriculture (for crops like fruits, vegetables, nuts, and grains), residential areas, and golf courses. It works by inhibiting photosynthesis in plants.

Exposure to simazine can occur through skin contact, ingestion, or inhalation. Potential health effects of exposure may include irritation to the eyes, skin, and respiratory tract. Ingesting large amounts can cause nausea, vomiting, diarrhea, and abdominal pain. Chronic exposure has been linked to neurological symptoms like headaches, dizziness, and decreased coordination. However, it's important to note that the general population's exposure to simazine is usually low, and significant health effects are unlikely under normal circumstances.

As with any chemical substance, individual sensitivity and susceptibility can vary, so if you suspect exposure or experience symptoms, it's advisable to consult a healthcare professional for proper evaluation and treatment.

Oxidoreductases acting on CH-CH group donors are a class of enzymes within the larger group of oxidoreductases, which are responsible for catalyzing oxidation-reduction reactions. Specifically, this subclass of enzymes acts upon donors containing a carbon-carbon (CH-CH) bond, where one atom or group of atoms is oxidized and another is reduced during the reaction process. These enzymes play crucial roles in various metabolic pathways, including the breakdown and synthesis of carbohydrates, lipids, and amino acids.

The reactions catalyzed by these enzymes involve the transfer of electrons and hydrogen atoms between the donor and an acceptor molecule. This process often results in the formation or cleavage of carbon-carbon bonds, making them essential for numerous biological processes. The systematic name for this class of enzymes is typically structured as "donor:acceptor oxidoreductase," where donor and acceptor represent the molecules involved in the electron transfer process.

Examples of enzymes that fall under this category include:

1. Aldehyde dehydrogenases (EC 1.2.1.3): These enzymes catalyze the oxidation of aldehydes to carboxylic acids, using NAD+ as an electron acceptor.
2. Dihydrodiol dehydrogenase (EC 1.3.1.14): This enzyme is responsible for the oxidation of dihydrodiols to catechols in the biodegradation of aromatic compounds.
3. Succinate dehydrogenase (EC 1.3.5.1): A key enzyme in the citric acid cycle, succinate dehydrogenase catalyzes the oxidation of succinate to fumarate and reduces FAD to FADH2.
4. Xylose reductase (EC 1.1.1.307): This enzyme is involved in the metabolism of pentoses, where it reduces xylose to xylitol using NADPH as a cofactor.

Flavins are a group of naturally occurring organic compounds that contain a characteristic isoalloxazine ring, which is a tricyclic aromatic structure. The most common and well-known flavin is flavin adenine dinucleotide (FAD), which plays a crucial role as a coenzyme in various biological oxidation-reduction reactions. FAD accepts electrons and hydrogens to form the reduced form, flavin adenine dinucleotide hydride (FADH2). Another important flavin is flavin mononucleotide (FMN), which is derived from FAD and functions similarly as a coenzyme. Flavins are yellow in color and can be found in various biological systems, including animals, plants, and microorganisms. They are involved in several metabolic pathways, such as the electron transport chain, where they contribute to energy production.

Catalysis is the process of increasing the rate of a chemical reaction by adding a substance known as a catalyst, which remains unchanged at the end of the reaction. A catalyst lowers the activation energy required for the reaction to occur, thereby allowing the reaction to proceed more quickly and efficiently. This can be particularly important in biological systems, where enzymes act as catalysts to speed up metabolic reactions that are essential for life.

Paraquat is a highly toxic herbicide that is used for controlling weeds and grasses in agricultural settings. It is a non-selective contact weed killer, meaning it kills any green plant it comes into contact with. Paraquat is a fast-acting chemical that causes rapid desiccation of plant tissues upon contact.

In a medical context, paraquat is classified as a toxicological emergency and can cause severe poisoning in humans if ingested, inhaled, or comes into contact with the skin or eyes. Paraquat poisoning can lead to multiple organ failure, including the lungs, kidneys, and liver, and can be fatal in severe cases. There is no specific antidote for paraquat poisoning, and treatment typically focuses on supportive care and managing symptoms.

It's important to note that paraquat is highly regulated and its use is restricted to licensed professionals due to its high toxicity. Proper protective equipment, including gloves, goggles, and respiratory protection, should be used when handling paraquat to minimize the risk of exposure.

Thioredoxin Reductase 1 (TXNRD1) is an enzyme that belongs to the thioredoxin reductase family. It is a homodimeric flavoprotein that contains a selenocysteine residue at its active site, which is essential for its catalytic activity.

The primary function of TXNRD1 is to reduce and regenerate the oxidized form of thioredoxin (TXN) by using NADPH as an electron donor. Thioredoxin is a small protein that plays a crucial role in maintaining the redox balance within the cell by regulating various cellular processes, such as DNA synthesis, gene expression, and apoptosis.

TXNRD1 is widely expressed in various tissues and is localized in the cytosol of the cell. It has been implicated in several physiological and pathological processes, including inflammation, oxidative stress, cancer, and neurodegenerative diseases. Inhibition of TXNRD1 has been shown to have potential therapeutic benefits in various disease models, making it an attractive target for drug development.

Bacteria are single-celled microorganisms that are among the earliest known life forms on Earth. They are typically characterized as having a cell wall and no membrane-bound organelles. The majority of bacteria have a prokaryotic organization, meaning they lack a nucleus and other membrane-bound organelles.

Bacteria exist in diverse environments and can be found in every habitat on Earth, including soil, water, and the bodies of plants and animals. Some bacteria are beneficial to their hosts, while others can cause disease. Beneficial bacteria play important roles in processes such as digestion, nitrogen fixation, and biogeochemical cycling.

Bacteria reproduce asexually through binary fission or budding, and some species can also exchange genetic material through conjugation. They have a wide range of metabolic capabilities, with many using organic compounds as their source of energy, while others are capable of photosynthesis or chemosynthesis.

Bacteria are highly adaptable and can evolve rapidly in response to environmental changes. This has led to the development of antibiotic resistance in some species, which poses a significant public health challenge. Understanding the biology and behavior of bacteria is essential for developing strategies to prevent and treat bacterial infections and diseases.

Molecular models are three-dimensional representations of molecular structures that are used in the field of molecular biology and chemistry to visualize and understand the spatial arrangement of atoms and bonds within a molecule. These models can be physical or computer-generated and allow researchers to study the shape, size, and behavior of molecules, which is crucial for understanding their function and interactions with other molecules.

Physical molecular models are often made up of balls (representing atoms) connected by rods or sticks (representing bonds). These models can be constructed manually using materials such as plastic or wooden balls and rods, or they can be created using 3D printing technology.

Computer-generated molecular models, on the other hand, are created using specialized software that allows researchers to visualize and manipulate molecular structures in three dimensions. These models can be used to simulate molecular interactions, predict molecular behavior, and design new drugs or chemicals with specific properties. Overall, molecular models play a critical role in advancing our understanding of molecular structures and their functions.

Carbon monoxide (CO) is a colorless, odorless, and tasteless gas that is slightly less dense than air. It is toxic to hemoglobic animals when encountered in concentrations above about 35 ppm. This compound is a product of incomplete combustion of organic matter, and is a major component of automobile exhaust.

Carbon monoxide is poisonous because it binds to hemoglobin in red blood cells much more strongly than oxygen does, forming carboxyhemoglobin. This prevents the transport of oxygen throughout the body, which can lead to suffocation and death. Symptoms of carbon monoxide poisoning include headache, dizziness, weakness, nausea, vomiting, confusion, and disorientation. Prolonged exposure can lead to unconsciousness and death.

Carbon monoxide detectors are commonly used in homes and other buildings to alert occupants to the presence of this dangerous gas. It is important to ensure that these devices are functioning properly and that they are placed in appropriate locations throughout the building. Additionally, it is essential to maintain appliances and heating systems to prevent the release of carbon monoxide into living spaces.

Dianisidine is a chemical compound that is primarily used in laboratory research as a reagent for detecting and measuring the presence of iron (Fe) in various substances. It is an aromatic amine with the molecular formula C10H12N2O2. Dianisidine is known for its ability to form a colored complex when it reacts with iron, which can be measured and used to determine the amount of iron present in a sample.

In a medical context, dianisidine may be used in diagnostic tests to detect and measure iron levels in biological samples such as blood or tissue. However, dianisidine itself is not a medication or therapeutic agent and does not have a direct medical application for treating diseases or conditions.

Chromatiaceae is a family of bacteria that are primarily characterized by their ability to photosynthesize and store energy in the form of sulfur granules. These bacteria are often found in aquatic environments, such as in salt marshes, freshwater sediments, and marine ecosystems. They are capable of using reduced sulfur compounds as an electron donor during photosynthesis, which distinguishes them from other photosynthetic bacteria that use water as an electron donor.

Chromatiaceae bacteria are gram-negative rods or curved rods, and they typically form distinct layers in the environment where they live. They are often found in stratified water columns, where they can form a layer of purple or brown-colored cells that are visible to the naked eye. The pigmentation comes from bacteriochlorophylls and carotenoids, which are used in light absorption during photosynthesis.

These bacteria play an important role in the biogeochemical cycling of sulfur and carbon in aquatic environments. They can help to remove excess nutrients from the water column, and they can also serve as a food source for other organisms in the ecosystem. However, some species of Chromatiaceae can also be associated with harmful algal blooms or other environmental disturbances that can have negative impacts on water quality and aquatic life.

Nitrogen oxides (NOx) are a group of highly reactive gases, primarily composed of nitric oxide (NO) and nitrogen dioxide (NO2). They are formed during the combustion of fossil fuels, such as coal, oil, gas, or biomass, and are emitted from various sources, including power plants, industrial boilers, transportation vehicles, and residential heating systems. Exposure to NOx can have adverse health effects, particularly on the respiratory system, and contribute to the formation of harmful air pollutants like ground-level ozone and fine particulate matter.

Viologens, also known as methylviologen dyes or paraquat salts, are a group of chemical compounds that have the general structure of bis(dimethylpyridinium). They are widely used in research as electron acceptors and in commercial applications such as herbicides. Viologens can undergo redox reactions, which make them useful for studies involving electron transfer. However, they can also be toxic to living organisms, including humans, due to their ability to generate reactive oxygen species that damage cells.

X-ray crystallography is a technique used in structural biology to determine the three-dimensional arrangement of atoms in a crystal lattice. In this method, a beam of X-rays is directed at a crystal and diffracts, or spreads out, into a pattern of spots called reflections. The intensity and angle of each reflection are measured and used to create an electron density map, which reveals the position and type of atoms in the crystal. This information can be used to determine the molecular structure of a compound, including its shape, size, and chemical bonds. X-ray crystallography is a powerful tool for understanding the structure and function of biological macromolecules such as proteins and nucleic acids.

Hemoglobin (Hb or Hgb) is the main oxygen-carrying protein in the red blood cells, which are responsible for delivering oxygen throughout the body. It is a complex molecule made up of four globin proteins and four heme groups. Each heme group contains an iron atom that binds to one molecule of oxygen. Hemoglobin plays a crucial role in the transport of oxygen from the lungs to the body's tissues, and also helps to carry carbon dioxide back to the lungs for exhalation.

There are several types of hemoglobin present in the human body, including:

* Hemoglobin A (HbA): This is the most common type of hemoglobin, making up about 95-98% of total hemoglobin in adults. It consists of two alpha and two beta globin chains.
* Hemoglobin A2 (HbA2): This makes up about 1.5-3.5% of total hemoglobin in adults. It consists of two alpha and two delta globin chains.
* Hemoglobin F (HbF): This is the main type of hemoglobin present in fetal life, but it persists at low levels in adults. It consists of two alpha and two gamma globin chains.
* Hemoglobin S (HbS): This is an abnormal form of hemoglobin that can cause sickle cell disease when it occurs in the homozygous state (i.e., both copies of the gene are affected). It results from a single amino acid substitution in the beta globin chain.
* Hemoglobin C (HbC): This is another abnormal form of hemoglobin that can cause mild to moderate hemolytic anemia when it occurs in the homozygous state. It results from a different single amino acid substitution in the beta globin chain than HbS.

Abnormal forms of hemoglobin, such as HbS and HbC, can lead to various clinical disorders, including sickle cell disease, thalassemia, and other hemoglobinopathies.

Protein conformation refers to the specific three-dimensional shape that a protein molecule assumes due to the spatial arrangement of its constituent amino acid residues and their associated chemical groups. This complex structure is determined by several factors, including covalent bonds (disulfide bridges), hydrogen bonds, van der Waals forces, and ionic bonds, which help stabilize the protein's unique conformation.

Protein conformations can be broadly classified into two categories: primary, secondary, tertiary, and quaternary structures. The primary structure represents the linear sequence of amino acids in a polypeptide chain. The secondary structure arises from local interactions between adjacent amino acid residues, leading to the formation of recurring motifs such as α-helices and β-sheets. Tertiary structure refers to the overall three-dimensional folding pattern of a single polypeptide chain, while quaternary structure describes the spatial arrangement of multiple folded polypeptide chains (subunits) that interact to form a functional protein complex.

Understanding protein conformation is crucial for elucidating protein function, as the specific three-dimensional shape of a protein directly influences its ability to interact with other molecules, such as ligands, nucleic acids, or other proteins. Any alterations in protein conformation due to genetic mutations, environmental factors, or chemical modifications can lead to loss of function, misfolding, aggregation, and disease states like neurodegenerative disorders and cancer.

Tungsten compounds refer to chemical substances that contain tungsten (W, atomic number 74) in its ionic or molecular form. Tungsten is a heavy metal and exists in several oxidation states, most commonly +6, +4, and +2. Tungsten compounds have various applications in industrial, medical, and technological fields.

Examples of tungsten compounds include:

* Tungstic acid (WO3·2H2O)
* Sodium polytungstate (Na6WO6)
* Calcium tungstate (CaWO4)
* Tungsten carbide (WC)
* Tungsten hexafluoride (WF6)

Tungsten compounds have been used in medical imaging, such as X-ray machines and CT scanners, due to their high density and ability to absorb X-rays. They are also used in the production of surgical instruments, dental alloys, and other medical devices. However, some tungsten compounds can be toxic or carcinogenic, so proper handling and disposal are essential.

Spectrophotometry, Ultraviolet (UV-Vis) is a type of spectrophotometry that measures how much ultraviolet (UV) and visible light is absorbed or transmitted by a sample. It uses a device called a spectrophotometer to measure the intensity of light at different wavelengths as it passes through a sample. The resulting data can be used to determine the concentration of specific components within the sample, identify unknown substances, or evaluate the physical and chemical properties of materials.

UV-Vis spectroscopy is widely used in various fields such as chemistry, biology, pharmaceuticals, and environmental science. It can detect a wide range of substances including organic compounds, metal ions, proteins, nucleic acids, and dyes. The technique is non-destructive, meaning that the sample remains unchanged after the measurement.

In UV-Vis spectroscopy, the sample is placed in a cuvette or other container, and light from a source is directed through it. The light then passes through a monochromator, which separates it into its component wavelengths. The monochromatic light is then directed through the sample, and the intensity of the transmitted or absorbed light is measured by a detector.

The resulting absorption spectrum can provide information about the concentration and identity of the components in the sample. For example, if a compound has a known absorption maximum at a specific wavelength, its concentration can be determined by measuring the absorbance at that wavelength and comparing it to a standard curve.

Overall, UV-Vis spectrophotometry is a versatile and powerful analytical technique for quantitative and qualitative analysis of various samples in different fields.

... reductase, methyl viologen-nitrite reductase, nitrite reductase (cytochrome, and NO-forming). This enzyme participates in ... Other names in common use include cd-cytochrome nitrite reductase, [nitrite reductase (cytochrome)] [misleading, see comments ... In enzymology, a nitrite reductase (NO-forming) (EC 1.7.2.1) is an enzyme that catalyzes the chemical reaction nitric oxide + ... I. Nitrite reductase". J. Biol. Chem. 218 (2): 617-625. doi:10.1016/S0021-9258(18)65827-2. PMID 13295215. Walker GC, Nicholas ...
In enzymology, a ferredoxin-nitrite reductase (EC 1.7.7.1) is an enzyme that catalyzes the chemical reaction NH3 + 2 H2O + 6 ... Joy KW, Hageman RH (1966). "The purification and properties of nitrite reductase from higher plants, and its dependence on ... Ramirez JM, Del Campo FF, Paneque A, Losada M (1966). "Ferredoxin-nitrite reductase from spinach". Biochim. Biophys. Acta. 118 ... whereas its 3 products are nitrite, reduced ferredoxin, and H+. This enzyme belongs to the family of oxidoreductases, ...
NADH-nitrite oxidoreductase, NADPH-nitrite reductase, assimilatory nitrite reductase, nitrite reductase [NAD(P)H2], and NAD(P) ... In enzymology, a nitrite reductase [NAD(P)H] (EC 1.7.1.4) is an enzyme that catalyzes the chemical reaction ammonium hydroxide ... Nicholas DJ, Medina A, Jones OT (1960). "A nitrite reductase from Neurospora crassa". Biochim. Biophys. Acta. 37 (3): 468-76. ... Lazzarini RA; Atkinson DE (1961). "A triphosphopyridine nucleotide-specific nitrite reductase from Escherichia coli". J. Biol. ...
Nitrite reductase EC 1.7.2.1, a 2-domain enzyme containing type-1 and type-2 copper centres. In addition to the above enzymes ... Suzuki S, Kataoka K, Yamaguchi K (October 2000). "Metal coordination and mechanism of multicopper nitrite reductase". Acc. Chem ...
... a nitrite reductase. Cytochrome bd is found in plenty of aerobic bacteria, especially when it has grown with a limited oxygen ... Borisov VB, Gennis RB, Hemp J, Verkhovsky MI (November 2011). "The cytochrome bd respiratory oxygen reductases". Biochimica et ... "Structure of a bd oxidase indicates similar mechanisms for membrane-integrated oxygen reductases". Science. 352 (6285): 583-6. ...
Wang R, Nicholas DJ (1986). "Some properties of nitrite and hydroxylamine reductases from Derxia gummosa". Phytochemistry. 25 ( ... NADH-hydroxylamine reductase, N-hydroxy amine reductase, hydroxylamine reductase (NADH2), and NADH2:hydroxylamine ... In enzymology, a hydroxylamine reductase (NADH) (EC 1.7.1.10) is an enzyme that catalyzes the chemical reaction. NH3 + NAD+ + ... Bernheim ML (1969). "The hydroxylamine reductase of mitochondria". Arch. Biochem. Biophys. 134 (2): 408-13. doi:10.1016/0003- ...
Nitrate reductase enzymes convert nitrate to nitrite. The mechanism involves the intermediacy of Mo-ONO2 complexes. Vasilchenko ...
Novel nitrite reductases have been isolated from strains of this species. This species has been recently transferred into the ... "Immunological identification and distribution of dissimilatory heme cd1 and nonheme copper nitrite reductases in denitrifying ... Suharti; Strampraad, MJ; Schröder, I; de Vries, S (Feb 27, 2001). "A novel copper A containing menaquinol NO reductase from ...
"A mammalian functional nitrate reductase that regulates nitrite and nitric oxide homeostasis". Nature Chemical Biology. 4 (7): ... It is suggested that xanthine oxidoreductase, along with other enzymes, participates in the conversion of nitrate to nitrite in ...
A bacterial cytochrome c functions as a nitrite reductase. Cytochrome c was also discovered in 1996 by Xiaodong Wang to have an ... It transfers electrons between Complexes III (Coenzyme Q - Cyt c reductase) and IV (Cyt c oxidase). Cytochrome c is highly ... Passon PG, Hultquist DE (July 1972). "Soluble cytochrome b 5 reductase from human erythrocytes". Biochimica et Biophysica Acta ...
Nitrate is reduced to nitrite by nitrate reductase, while NO is mainly formed due to anaerobic reduction of nitrite which may ... Gupta KJ, Igamberdiev AU (July 2011). "The anoxic plant mitochondrion as a nitrite: NO reductase". Mitochondrion. 11 (4): 537- ... Stoimenova M, Igamberdiev AU, Gupta KJ, Hill RD (July 2007). "Nitrite-driven anaerobic ATP synthesis in barley and rice root ... Yamasaki H, Sakihama Y (February 2000). "Simultaneous production of nitric oxide and peroxynitrite by plant nitrate reductase: ...
Mechanisms of Pepsin Catalysis Binding of ligands to Proteins Kinetics of nitrite reductase Kinetics of nitrate reductase The ... Jackson, RH; Cole, JA; Cornish-Bowden, A (1 May 1982). "The steady state kinetics of the NADH-dependent nitrite reductase from ... Coleman, KJ; Cornish-Bowden, A; Cole, JA (1 November 1978). "Purification and properties of nitrite reductase from Escherichia ... "Kinetic studies of a soluble alpha beta complex of nitrate reductase A from Escherichia coli. Use of various alpha beta mutants ...
"Nitrite-Reductase and Peroxynitrite Isomerization Activities of Methanosarcina acetivorans Protoglobin". PLOS ONE. 9 (5): ... "Geranylgeranyl Reductase and Ferredoxin from Methanosarcina acetivorans Are Required for the Synthesis of Fully Reduced ...
... then both nitrate reductase and nitrite reductase are present. If the solution turns red, nitrate reductase is not present. V.B ... The nitrate reductase test is a test to differentiate between bacteria based on their ability or inability to reduce nitrate ( ... If the bacterium produces nitrate reductase, the broth will turn a deep red within 5 minutes at this step. If no color change ... NO3−) to nitrite (NO2−) using anaerobic respiration. Various assays for detecting nitrate reduction have been described. One ...
Enzymes in this family include DMSO reductase, xanthine oxidase, nitrite reductase, and sulfite oxidase. Bioinorganic chemistry ...
Prosthetic group of sulfite and nitrite reductases and its role in the biosynthesis of vitamin B12". Journal of the American ... A New Prosthetic Group Participating in Six-Electron Reduction Reactions Catalyzed by Both Sulfite and Nitrite Reductases". ... in the early 1970s when it was shown to be the metal-free form of the prosthetic group in the ferredoxin-nitrite reductase from ... the iron-containing prosthetic group in sulfite reductase enzymes. It is also the biosynthetic precursor to cofactor F430, an ...
Ferredoxin-nitrite reductase Hydrogensulfite reductase Nitrite reductase (NAD(P)H) Matthew J. Murphy; et al. (1974). "Siroheme ... A New Prosthetic Group Participating in Six-Electron Reduction Reactions Catalyzed by Both Sulfite and Nitrite Reductases". ... It is a cofactor at the active site of sulfite reductase, which plays a major role in sulfur assimilation pathway, converting ...
"X-ray structure of a blue-copper nitrite reductase in two crystal forms. The nature of the copper sites, mode of substrate ... "The substrate-binding site in Cu nitrite reductase and its similarity to Zn carbonic anhydrase". Nature Structural & Molecular ... "Impact of residues remote from the catalytic centre on enzyme catalysis of copper nitrite reductase". Nature Communications. 5 ... and product-complexed Cu-nitrite reductase provide insight into catalytic mechanism". Proceedings of the National Academy of ...
Scoffield then found that P. aeruginosa require nitrite reductase to survive in the presence of nitrite producing commensal ... doi:10.1371/journal.ppat.1006300 Scoffield JA, Wu H. Nitrite reductase is critical for Pseudomonas aeruginosa survival during ... Scoffield, Jessica A.; Wu, Hui (2016-02-01). "Nitrite reductase is critical for Pseudomonas aeruginosa survival during co- ... doi:10.1099/mic.0.000226 Scoffield JA, Wu H. Oral streptococci and nitrite-mediated interference of Pseudomonas aeruginosa. ...
Nitrate reductase) NO 2− + 2 H+ + e− → NO + H2O (Nitrite reductase) 2 NO + 2 H+ + 2 e− → N 2O + H2O (Nitric-oxide reductase) N ... Other genes known in microorganisms which denitrify include nir (nitrite reductase) and nos (nitrous oxide reductase) among ... In these areas, nitrate (NO3−) or nitrite (NO 2−) can be used as a substitute terminal electron acceptor instead of oxygen (O2 ... Upon oxygen exposure, the bacteria is able to utilize nitrous oxide reductase, an enzyme that catalyzes the last step of ...
Nitrite is then reduced to ammonia in the chloroplasts (plastids in roots) by a ferredoxin dependent nitrite reductase. In ... Nitrate is first reduced to nitrite (NO2−) in the cytosol by nitrate reductase using NADH or NADPH. ...
Example for Type-I blue copper protein are plastocyanine , azurin, and nitrite reductase, haemocyanin and tyrosinase . The Blue ... A tetranuclear Copper Z centre (CuZ) is found in nitrous-oxide reductase. The four copper atoms are coordinated by seven ... are found in cytochrome c oxidase and nitrous-oxide reductase (EC 1.7.99.6). The two copper atoms are coordinated by two ...
... producing two molecules of nitrite. One of these is reduced to NO by the nitrite reductase (nirK) and goes back to the cu-ME ... and the nitrite reductase enzyme (nirK) and its reverse: •In the first one ammonia is oxidized through AMO forming the ... They oxidize ammonia to nitrite and members of N. maritimus can oxidize ammonia at levels as low as 10 nanomolar, near the ... Members of the species N. maritimus can oxidize ammonia to form nitrite, which is the first step of the nitrogen cycle. Ammonia ...
The first gene involved in this process is nirK that encodes for a nitrite reductase with copper. This enzyme catalyzes the ... Nitrite is the major nitrogen oxide produced in the process, but it has been observed that, when oxygen concentrations are low ... Nitrification can be slowed down by some inhibitors that are able to slow down the oxidation process of ammonia to nitrites by ... Recently is found the norSY gene that encodes for a nitric-oxide reductase with copper in N. communis strain Nm2 and ...
... nitrate and nitrite reductases as well as glutamate synthase. It also has a reduced genome, likely following the genome ...
... and dioxygenases and nitrite reductases. In particular, copper-containing enzymes include hemocyanins, one flavor of superoxide ...
... nitrite reductase and glutamine synthase. An ammonium produced by the nitrite reductase reaction will be incorporated into ...
These adaptations led to the removal of key enzymes from the genome, such as nitrate reductase, nitrite reductase, and often ...
The cycle involving nitrate reductase, reduction of nitrite to NO, scavenging NO by phytoglobin was defined as the phytoglobin- ...
... reduced to nitrite by nitrate reductase, and then nitrite is reduced to ammonia by nitrite reductase. Ammonia then goes into ... Prokaryotic nitrate reductases have two major types, transmembrane nitrate reductases and periplasmic nitrate reductases. The ... assimilatory nitrate reductases (Nas), respiratory nitrate reductase (Nar), and periplasmic nitrate reductases (Nap). The ... Nitrate reductases are molybdoenzymes that reduce nitrate (NO− 3) to nitrite (NO− 2). This reaction is critical for the ...
... refers to any of several classes of enzymes that catalyze the reduction of nitrite. There are two classes of ... Cytochrome c nitrite reductase (ccNIR) is a multiheme enzyme that converts nitrite to ammonia on each active site. The active ... The nitrite is immediately reduced to ammonia (probably via hydroxylamine) by the activity of nitrite reductase. The term ... Nitrite oxidoreductase Ferredoxin-nitrite reductase (NiR) involved in the assimilation of nitrates by plants Atkins P, Overton ...
Nitrite reductase may also refer to: Nitrite reductase (NO-forming) Nitrite reductase (NAD(P)H) Cytochrome c nitrite reductase ... Look up nitrite reductase in Wiktionary, the free dictionary. Nitrite reductase refers to any of several classes of enzymes ... Ferredoxin-nitrite reductase Nitrate reductase (disambiguation) This disambiguation page lists articles associated with the ... title Nitrite reductase. If an internal link led you here, you may wish to change the link to point directly to the intended ...
... (ccNiR) (EC 1.7.2.2) is a bacterial enzyme that catalyzes the six electron reduction of nitrite ... Cytochrome c Nitrite Reductase is a homodimer which contains five c-type heme cofactors per monomer. Four of the heme centers ... "Escherichia coli cytochrome c nitrite reductase NrfA". Meth. Enzymol. Methods in Enzymology. 437: 63-77. doi:10.1016/S0076-6879 ... "Structure of cytochrome c nitrite reductase". Nature. 400 (6743): 476-80. Bibcode:1999Natur.400..476E. doi:10.1038/22802. PMID ...
Nitrate reductase (NADH) Nitrate reductase (NADPH) Nitrate reductase (NAD(P)H) Nitrate reductase (quinone) Nitrite reductase ( ... Nitrate reductases are enzymes that reduce nitrate to nitrite. Nitrate reductase may also refer to: Nitrate reductase ( ... disambiguation) This disambiguation page lists articles associated with the title Nitrate reductase. If an internal link led ...
Proteins localized to the pyrenoid include RuBisCO activase, nitrate reductase and nitrite reductase. In Chlamydomonas, a high- ... López-Ruiz, A., Verbelen, J. P., Bocanegra, J. A., & Diez, J. (1991). Immunocytochemical localization of nitrite reductase in ... Lopez-Ruiz, A., Verbelen, J. P., Roldan, J. M., & Diez, J. (1985). Nitrate reductase of green algae is located in the pyrenoid ...
"Close genetic relationship between Nitrobacter hamburgensis nitrite oxidoreductase and Escherichia coli nitrate reductases". ... When both nitrite and organic substances are present, cells can exhibit biphasic growth; first the nitrite is used and after a ... Members of the genus Nitrobacter use nitrite as a source of electrons (reductant), nitrite as a source of energy, and CO2 as a ... Nitrite is not a particularly favourable substrate from which to gain energy. Thermodynamically, nitrite oxidation gives a ...
Siroheme is a co-factor of both assimilatory and dissimilatory nitrite and sulfite reductases. Siroheme is synthesized from the ...
When expressed in nitrogen-fixing organisms, azurin serves as the electron donor to nitrite reductase, an enzyme in the ... as well as from some c-type cytochromes to nitrite reductases. Azurin has garnered significant attention as a potential ... are believed to be involved in its interaction with the redox partners cytochrome c551 and nitrite reductase. Although ... "Involvement of the hydrophobic patch of azurin in the electron-transfer reactions with cytochrome C551 and nitrite reductase". ...
"Boletus edulis Nitrite Reductase Reduces Nitrite Content of Pickles and Mitigates Intoxication in Nitrite-intoxicated Mice". ... Nitrites, responsible for the creation of N-nitroso compounds, is reduced by low pH and/or high temperature. Inclusion of a ... "Evaluation of nitrate and nitrite contents in pickled fruit and vegetable products". Food Control. 90: 304-311. doi:10.1016/j. ... porcini enzyme (or the whole mushroom) also reduces nitrite content. Pickled cucumbers Pickled herring Pickled mushrooms ...
... reductase, methyl viologen-nitrite reductase, nitrite reductase (cytochrome, and NO-forming). This enzyme participates in ... Other names in common use include cd-cytochrome nitrite reductase, [nitrite reductase (cytochrome)] [misleading, see comments ... In enzymology, a nitrite reductase (NO-forming) (EC 1.7.2.1) is an enzyme that catalyzes the chemical reaction nitric oxide + ... I. Nitrite reductase". J. Biol. Chem. 218 (2): 617-625. doi:10.1016/S0021-9258(18)65827-2. PMID 13295215. Walker GC, Nicholas ...
To achieve this goal we propose to undertake a comprehensive and detailed study of a series of related Nitrite Reductases (NiR ... The objectives of the project are (i) to characterise biochemically and kinetically several nitrite reductases (NiR) from ... In the mechanism of reduction of nitrite (N02-) to nitrous oxide (NO), both the substrate binding reaction and the electron ...
Nitrite reductaseCOPPER (II) IONNITRITE ION
Nitrite Reductase, an enzyme for which kinetics are different at rest than during turn over.. ... that is used to simultaneously monitor the type-1 copper oxidation state and the nitrite turn-over rate of a nitrite reductase ... The intramolecular electron transfer rate between the type-1 and type-2 copper site changes at high nitrite concentration (≥520 ... nitrite conditions. This effect is attributed to slower reduction rate of type-2 copper centre due to a rate-limiting ...
NADH-nitrite oxidoreductase. NADPH-nitrite reductase. nitrite reductase (reduced nicotinamide adenine dinucleotide (phosphate)) ...
Nitrite ReductasesNitritesNitrite Reductase (NAD(P)H)Nitrate ReductasesSodium NitriteFerredoxin-Nitrite ReductaseNitrates ... Nitrite ReductasesNitritesNitrite Reductase (NAD(P)H)Nitrate ReductasesSodium NitriteFerredoxin-Nitrite ReductaseNitrates ... Nitrite reductase may also refer to: Nitrite reductase (NO-forming) Nitrite reductase (NAD(P)H) Cytochrome c nitrite reductase ... Nitrite reductase (NAD(P)H). NADH-nitrite oxidoreductase, NADPH-nitrite reductase, assimilatory nitrite reductase, nitrite ...
STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE ... Murphy, M.E. et al., Structure of nitrite bound to copper-containing nitrite reductase from Alcaligenes faecalis. Mechanistic ... STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE AT CRYO TEMPERATURE Coordinates. PDB Format Method. X-RAY DIFFRACTION 2.00 ...
In vivo, nitrite conversion to nitric oxide requires the nitrite reductase activity of xanthine oxidase and cytochrome P-450, ... In vivo, nitrite conversion to nitric oxide requires the nitrite reductase activity of xanthine oxidase and cytochrome P-450, ... that the nitrite-dependent inotropism required the nitrite reductase activity of both enzymes. We also found that xanthine ... that the nitrite-dependent inotropism required the nitrite reductase activity of both enzymes. We also found that xanthine ...
CONFORMATION OF CD1 NITRITE REDUCTASE NIRS WITHOUT BOUND HEME D1 - 6TPO , canSARS ...
Identification of the Proton Channel to the Active Site Type 2 Cu Center of Nitrite Reductase: Structural and Enzymatic ... 1.85 Å resolutioncopper nitrite reductasesT 2Cu sitetype 2 Cu center254FAsn 90Ser mutationproton channelActive Site Type 2 Cu ... Identification of the Proton Channel to the Active Site Type 2 Cu Center of Nitrite Reductase: Structural and Enzymatic ... Two distinct proton channels have previously been identified in copper nitrite reductases based on high- to atomic-resolution ...
Solvent-slaved protein motions accompany proton coupled electron transfer reactions catalysed by copper nitrite reductase ... Tyrosine, cysteine, and proton coupled electron transfer in a ribonucleotide reductase-inspired beta hairpin maquette Tyler G. ... novel approach to study PCET reactions illustrates the importance of solvent-slaved protein motions in copper nitrite reductase ...
... nitrate reductase (narGH); 3, nitrite reductase (nirS); 4, nitric oxide reductase (norB); 5, nitrous oxide reductase (nosZ); 6 ... assimilatory nitrate reductase (nasAB); 7, assimilatory nitrite reductase (nirB); 8, anaerobic nitric oxide reductase ... 4.4 m from well CMT-03). For example, nitrite reductases (nirK and nrfA) were reported in some reconstructed Chloroflexi ... In addition to expressed denitrification, we found genes representing assimilatory nitrate reductase (nasAB) and a nitrite ...
... these features were functional nitrite reductase (AniA); frameshifted fHbp allele found mostly in urethritis and proctitis ... most of the CC4821 isolates contained a putatively functional nitrite reductase (AniA), required for growth in anaerobic ...
In hypoxia, erythrocytic hemoglobin tetramers produce nitric oxide through nitrite reduction. We hypothesized that the alpha ... We conclude the presence of alpha globin in resistance artery endothelium acts as a nitrite reductase providing local nitric ... Endothelial alpha globin is a nitrite reductase. 发布时间:2022-11-09点击:71 ... We hypothesized that the alpha subunit of hemoglobin expressed in endothelium also facilitates nitrite reduction proximal to ...
Categories: Nitrite Reductases Image Types: Photo, Illustrations, Video, Color, Black&White, PublicDomain, CopyrightRestricted ...
Sato K, Dennison C. Active site comparison of CoII blue and green nitrite reductases. Chemistry - A European Journal 2006, 12( ... Sato K, Firbank SJ, Li C, Banfield MJ, Dennison C. The importance of the long type 1 copper-binding loop of nitrite reductase ... Redox cycling and kinetic analysis of single molecules of solution-phase nitrite reductase. Proceedings of the National Academy ... Dennison C, Oda K, Kohzuma T. Paramagnetic NMR studies of copper-containing nitrite reductases. Chemical Communications 2000, ( ...
Nitrite is reduced by nitrite reductase NirB without small subunit NirD in Escherichia coli. Yılmaz H, İbici HN, Erdoğan EM, ... Comparison of ion selectivities of nitrite channel NirC and water channel aquaporin. Yılmaz H, Erdoğan EM, Ergenekon P, Özkan M ...
PDB Compounds: (B:) Copper-containing nitrite reductase. SCOPe Domain Sequences for d2e86b2:. Sequence; same for both SEQRES ... PDB Description: Azide bound to copper containing nitrite reductase from A. faecalis S-6 ...
blue copper proteins, e.g. plastocyanin, nitrite reducates, and azurin. *Mo enzymes (DMSO reductase, sulfite oxidase, xanthine ... the type 2 copper site in nitrite reductase, and Cu-substituted alcohol dehydrogenase) ...
PDB Description: cytochrome cd1 nitrite reductase, oxidised form. SCOP Domain Sequences for d1qksb2:. Sequence; same for both ... Protein C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase [51006] (3 species). the N-terminal domain is ... Superfamily b.70.2: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase [51004] (1 family) ... d1qksb2 b.70.2.1 (B:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans} ...
ASTM D7781-14; Standard Test Method for Nitrite-Nitrate in Water by Nitrate Reductase. ASTM: West Conshohocken, PA, USA, 2018; ... A correction was made to rule out the possible presence of nitrites by performing a second measurement at 275 nm (LOD 0.01 mg/L ... nitrite, phosphate, and ammonium in aquatic environment. Chemosphere 2020, 259, 127492. [Google Scholar] [CrossRef] ... The correction was made for all the nitrate samples to determine the possible presence of nitrites. The removal efficiency (R) ...
A mammalian functional nitrate reductase that regulates nitrite and nitric oxide homeostasis. Nat Chem Biol 4:411-417. ... Nitrate and nitrite content of human, formula, bovine, and soy milks: implications for dietary nitrite and nitrate ... Origin and significance of nitrite in water. In: Hill MJ, editor. Nitrates and nitrites in food and water. Chichester England: ... The potent vasodilator ethyl nitrite is formed upon reaction of nitrite and ethanol under gastric conditions. Free Radic Biol ...
Cytochrome c4 and copper nitrite reductase. Bohr, H., Shim, I., Ulstrup, J. & Xiao, X., dec. 2022, I: Current Opinion in ...
... methemoglobin-reductase (NADH-cytochrome b5 reductase) in infants has not yet reached full activity. After absorption, nitrites ... Nitrate is reduced to nitrite by the enzyme nitrate reductase. This enzyme is found in plants, certain bacterial species, and ... which the nitrites are readily absorbed into the blood stream. Furthermore, ... Nitrites can also cause vasodilation, which, like methemoglobineamia, is dose-related. ...
In soil nitrite reductases, one of these surface loops is positioned near the type I copper site and contributes residues to ... A phylogenic analysis indicates that AniA is a member of a new class of copper-containing nitrite reductases. Expression of the ... a new class of copper-containing nitrite reductases.. Boulanger, M.J., Murphy, M.E.. (2002) J Mol Biol 315: 1111-1127 ... the core cupredoxin fold of AniA is similar to that found in copper-containing nitrite reductases from soil bacteria. The main ...
PCR detection of genes encoding nitrite reductase in denitryifying bacteria.. Hallin, S et al. ... PCR detection of genes encoding nitrite reductase in denitryifying bacteria.1999In: Applied and Environmental Microbiology, ...
Sodium tungstate was used in this study to implement nitrogen stress by inhibiting nitrate reductase (NR) in,i, Dunaliella ... In eukaryotic microalgae, nitrate reductase (NR) is a molybdoenzyme reducing nitrate to nitrite:. This reduction constitutes ... The reaction was stopped by filtering the assay mixture and filtered solution was used for nitrite determination. Nitrite was ... Nitrate Reductase Inhibition Induces Lipid Enhancement of Dunaliella Tertiolecta for Biodiesel Production. Redouane Benhima. ,1 ...
Regulation of Ferredoxin-Nitrite Reductase in Synchronous Chlamydomonas Reinhardtii. Comunicaci n en congreso. International ... Characterisation and Expression Studies of a Root Cdna Encoding for Ferredoxin-Nitrite Reductase from Lotus Japonicus. En: ... Nitrate Assimilation in Lotus Japonicus (I). General Aspects, Mutant Screening and Cloning of Nitrite Reductase. Comunicaci n ... Regulation of the Expression of Ferredoxin-Nitrite Reductase in Synchronous Cultures of Chlamydomonas-Reinhardtii. En: ...
  • In enzymology, a nitrite reductase (NO-forming) (EC 1.7.2.1) is an enzyme that catalyzes the chemical reaction nitric oxide + H2O + ferricytochrome c ⇌ nitrite + ferrocytochrome c + 2 H+ The 3 substrates of this enzyme are nitric oxide, H2O, and ferricytochrome c, whereas its 3 products are nitrite, ferrocytochrome c, and H+. (wikipedia.org)
  • the c-type nitric oxide reductase (cNOR), from the model soil bacterium P. denitrificans. (abberior.rocks)
  • 2001. Effects of pH, nitrite, and ascorbic acid on nonenzymatic nitric oxide generation and bacterial growth in urine. (cdc.gov)
  • These nitrites when circulating in the blood can then be converted to nitric oxide (NO) under certain conditions, which is a powerful vasodilator that can aid cardiovascular health by improving blood flow and reducing blood pressure. (science20.com)
  • In fecal samples, they found a slight, but statistically significant increase in the abundance of genes that encoding nitrate, nitrite and nitric oxide reductases in migraineurs. (science20.com)
  • The diiron protein YtfE is a nitric oxide-generating nitrite reductase involved in management of nitrosative stress. (uea.ac.uk)
  • Nitrate (NO 3 ) is reduced to nitrite (NO 2- ) which is further reduced to nitric oxide (NO)(Khatri et al. (hybridpainrelief.com)
  • Copper nitrite reductases (CuNiRs) catalyze the reduction of nitrite to form nitric oxide. (ebsco.com)
  • team found herbs like DanShen ( Salvia miltiorrhiza , aka Chinese Salvia or Red Sage) and GuaLou ( Trichosanthis krilowii ) "have profound nitric oxide bioactivity primarily through the enhancement of nitric oxide in the inner walls of blood vessels, but also through their ability to convert nitrite and nitrate into nitric oxide. (holisticprimarycare.net)
  • Our discovery of a pathway to heme via siroheme and DDSH stemmed from showing that this reaction sequence was also on the pathway to the modified tetrapyrrole, d1 heme, of the periplasmic bacterial cytochrome cd1 nitrite reductase that catalyses the reduction of nitrite to nitric oxide. (ukri.org)
  • putative formate-dependent nitrite reductase [Ensembl]. (ntu.edu.sg)
  • We have recently reported that nitrite reductase, a bifunctional enzyme located in the periplasmic space of Pseudomonas aeruginosa , could induce interleukin-8 (IL-8) generation in a variety of respiratory cells, including bronchial epithelial cells (K. Oishi et al. (neuroprobe.com)
  • Spectrophotometric confirmation for oxygen ligation to the reduced haem d(1) of Pseudomonas nautica nitrite reductase. (unl.pt)
  • NECi's recombinant Nitrate Reductase drives all Nitrate to Nitrite using NADH, which reacts with color reagents under acidic conditions to produce a visible color. (nitrate.com)
  • It has been suggested that nitrate and nitrite may play a role in the etiology of human oral cancer. (iospress.com)
  • We investigated whether salivary nitrate and nitrite and the activity of nitrate reductase (NRase) may affect the risk of oral cancer in Egypt, an area with high levels of environmental nitrosating agents. (iospress.com)
  • Our findings suggest that increased consumption of dietary nitrate and nitrite is associated with elevated levels of salivary nitrite. (iospress.com)
  • Together with the increased activity of salivary NRase, these observations may explain, at least in part, the role of nitrate and nitrite in the development of oral cancer in individuals from an area with a high burden of N-nitroso precursors. (iospress.com)
  • For information on how to detect nitrate and nitrite reductase activity, refer to the nitrate reduction test . (vumicro.com)
  • Cytochrome cd 1 also has oxidase and hydroxylamine reductase activities. (qmul.ac.uk)
  • Does the reduction of c heme trigger the conformational change of crystalline nitrite reductase? (expasy.org)
  • dimethyl sulfoxide reductase, anaerobic, subunit B. (ntu.edu.sg)
  • formate-dependent nitrite reductase, 4Fe4S subunit. (ntu.edu.sg)
  • Some also have an enzyme called nitrite reductase that can convert nitrite into nitrogen gas. (vumicro.com)
  • NosL is a dedicated copper chaperone for assembly of the Cuz center of nitrous oxide reductase. (uea.ac.uk)
  • 1992. Isolation and characterization of a nitrite reductase gene and its use as a probe for denitrifying bacteria. (nih.gov)
  • Fd acts simultaneously as a bottleneck and as a hub which distributes high-energy electrons to a multitude of enzymes, which include nitrite reductase, sulphite reductase, fatty acid desaturase, glutamine-2-oxoglutarate amino transferase (GOGAT), redox complexes such as cytochrome b 6 /f for cyclic electron transport (CET) and thioredoxins 2 . (nature.com)
  • A group of enzymes that oxidize diverse nitrogenous substances to yield nitrite. (nih.gov)
  • Molecular characterization of a copper-containing nitrite reductase from Rhodopseudomonas sphaeriodes forma sp. (wikipedia.org)
  • Molecular characterization of nitrite reductase gene (aniA) and gene product in Neisseria meningitidis isolates: is aniA essential for meningococcal survival? (nih.gov)
  • 5. Michalski, W.P. and Nicholas, D.J.D. Molecular characterization of a copper-containing nitrite reductase from Rhodopseudomonas sphaeriodes forma sp. (qmul.ac.uk)
  • May also catalyse the reaction of hydroxylamine reductase ( EC 1.7.99.1 ) since this is a well-known activity of cytochrome cd 1 . (qmul.ac.uk)
  • The present study evaluates sequence conservation in the gene coding for nitrite reductase (aniA) and AniA expression from a panel of Neisseria meningitidis isolates. (nih.gov)
  • The Neisseria gonorrhoeae gene aniA encodes an inducible nitrite reductase. (mpg.de)
  • The discovery of a novel physiological function for hemoglobin as an electronically and allosterically regulated nitrite reductase (Cosby, et al. (nih.gov)
  • These studies reveal that nitrite is a potent vasodilator in humans, is bioactivated by reaction with deoxyhemoglobin to generate NO preferentially under hypoxic conditions and suggest that hemoglobin has an enzymatic property of a nitrite reductase that participates in hypoxic vasodilation. (nih.gov)
  • Hemolysis and Heinz body formation may be exaggerated in individuals with a glucose-6-phosphate dehydrogenase (G6PD) deficiency, or methemoglobin reductase deficiency, or hemoglobin M. This reaction is frequently dose-related. (nih.gov)
  • Drugs or chemicals which have produced significant hemolysis in G6PD or methemoglobin reductase deficient patients include Dapsone, sulfanilamide, nitrite, aniline, phenylhydrazine, napthalene, niridazole, nitro-furantoin and 8-amino-antimalarials such as primaquine. (nih.gov)
  • 14478 3-oxoacyl-[acyl-carrier protein] reductase fabG BBZA01000001 CDS ARMA_0014 complement(14430. (go.jp)
  • For the Scottish Executive Micronet programme I investigated the scale of diversity amongst non-culturable soil bacteria which are capable of nitrite reduction and related these to the rhizosphere/rhizoplane of different grass species, and soil nutritional inputs, that is artificial sheep urine. (hutton.ac.uk)
  • If the bacterium also produces nitrite reductase, nitrogen gas will be liberated. (vumicro.com)
  • Solution-State Inter-Copper Distribution of Redox Partner-Linked Copper Nitrite Reductases: A Pulsed Electron-Electron Double Resonance Spectroscopy Study. (ebsco.com)
  • Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases. (ebsco.com)
  • Active Intermediates in Copper Nitrite Reductase Reactions Probed by a Cryotrapping-Electron Paramagnetic Resonance Approach. (ebsco.com)
  • If a bacterium producing nitrate reductase is grown in a medium containing nitrate, the enzyme converts the nitrate to nitrite. (vumicro.com)
  • Nitrite reacts with certain chemicals to yield a red-colored product. (vumicro.com)
  • 2013). Digested nitrate is returned to the mouth through the saliva where it is reduced to nitrite through interaction with oral bacteria (Bailey et al. (hybridpainrelief.com)
  • Specifically, we will be looking at the acute and chronic effects of beetroot juice on plasma nitrate/nitrite levels, aerobic exercise, anaerobic exercise, and general health. (hybridpainrelief.com)
  • anaerobic dimethyl sulfoxide reductase chain B. (ntu.edu.sg)
  • It catalyzes the six-electron oxidation of AMMONIA to nitrite. (bvsalud.org)
  • The discovery that the nitrite anion is a circulating storage pool for NO bioactivity (Gladwin, et al. (nih.gov)
  • In related translational studies Dr. Gladwin has demonstrated that inhaled nitrite reverses hypoxic neonatal pulmonary hypertension in sheep (Hunter, et al. (nih.gov)
  • 2004. Dietary nitrites and nitrates, nitrosatable drugs, and neural tube defects. (cdc.gov)
  • 3. ARM-microcontroller based portable nitrite electrochemical analyzer using cytochrome c reductase biofunctionalized onto screen printed carbon electrode. (nih.gov)
  • 19. A nitrite biosensor based on the immobilization of cytochrome c on multi-walled carbon nanotubes-PAMAM-chitosan nanocomposite modified glass carbon electrode. (nih.gov)
  • 0.05) higher in … oral cancer patients (n = 42) compared to control Egyptian healthy individuals (n = 40, nitrite = 5.3 ± 0.3 µg/ml, nitrate = 27 ± 1.2 µg/ml, and NRase activity = 46 ± 4 nmol/ml/min). (iospress.com)
  • Other names in common use include cd-cytochrome nitrite reductase, [nitrite reductase (cytochrome)] [misleading, see comments. (wikipedia.org)
  • Nitrates, found in foods like processed meats, green leafy vegetables, and in certain medicines, can be reduced to nitrites by bacteria found in the oral cavity. (science20.com)
  • It consists of two domains and forms trimers and hence resembles the quaternary structure of nitrite reductases or ceruloplasmins more than that of large laccases. (nih.gov)
  • When blood samples are measured 45 min post consumption of nitrate rich beetroot juice, minimal differences are found in plasma nitrate levels however large increases in plasma nitrite levels will be found (F. J. Larsen, Weitzberg, Lundberg, & Ekblom, 2007). (hybridpainrelief.com)
  • The strongest indicators of UTI were the patient's suspicion of having a UTI and a positive nitrite test. (medscape.com)

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