Infectious hematopoietic necrosis virus
Rhabdoviridae
Rhabdoviridae Infections
Fish Diseases
Oncorhynchus mykiss
Densovirinae
Salmon
Salmonidae
Aquaculture
Tragacanth
Salmoniformes
Novirhabdovirus
Trout
Decapoda (Crustacea)
Infectious pancreatic necrosis virus
Viral Vaccines
Fishes
Penaeidae
Virulence
Glycoproteins
Molecular Sequence Data
Evidence for a carrier state of infectious hematopoietic necrosis virus in chinook salmon Oncorhynchus tshawytscha. (1/41)
In British Columbia, Canada, infectious hematopoietic necrosis virus (IHNV) is prevalent in wild sockeye salmon Oncorhynchus nerka and has caused disease in seawater net-pen reared Atlantic salmon Salmo salar. In this study, chinook salmon Oncorhynchus tshawytscha experimentally exposed to an isolate of IHNV found in British Columbia became carriers of the virus. When Atlantic salmon were cohabited with these virus-exposed chinook salmon, IHNV was isolated from the Atlantic salmon. Identification of chinook salmon populations that have been exposed to IHNV may be difficult, as virus isolation was successful only in fish that were concurrently infected with either Renibacterium salmoninarum or Piscirickettisia salmonis. Also, IHNV-specific antibodies were detected in only 2 of the 70 fish experimentally exposed to the virus. Two samples collected from chinook salmon exposed to IHNV while at a salt water net-pen site had a seroprevalence of 19 and 22%; however, the inconsistencies between our laboratory and field data suggest that further research is required before we can rely on serological analysis for identifying potential carrier populations. Because of the difficulty in determining the exposure status of populations of chinook salmon, especially if there is no concurrent disease, it may be prudent not to cohabit Atlantic salmon with chinook salmon on a farm if there is any possibility that the latter have been exposed to the virus. (+info)Novel form of fibronectin from zebrafish mediates infectious hematopoietic necrosis virus infection. (2/41)
The presence of a novel form of zebrafish fibronectin (FN2) on the cell surface increased the cell's susceptibility to infection by infectious hematopoietic necrosis virus (IHNV). Unlike other fibronectins, FN2 possesses a truncated structure and accumulates on the cell surface instead of in the extracellular matrix. Fish embryo cells expressing recombinant FN2 were more susceptible to IHNV infection, with a greater percentage of cells exhibiting cytopathic effect (CPE) compared to nontransfected control cells. Incubation of nontransfected cells with soluble recombinant FN2 increased IHNV infection, as measured by plaque assay. The number of plaques increased in correlation with the amount of protein added and the length of time that cells were incubated with the protein. Incubation of IHNV with soluble FN2 before addition to cells also increased infection. FN2 immobilized on the culture surface inhibited IHNV infection. The results indicate that FN2 present on the cell surface is able to mediate IHNV attachment and cell entry. (+info)Heterologous exchanges of the glycoprotein and the matrix protein in a Novirhabdovirus. (3/41)
Infectious hematopoietic necrosis virus (IHNV) and viral hemorrhagic septicemia virus (VHSV) are two salmonid rhabdoviruses replicating at low temperatures (14 to 20 degrees C). Both viruses belong to the Novirhabdovirus genus, but they are only distantly related and do not cross antigenically. By using a recently developed reverse-genetic system based on IHNV (S. Biacchesi et al., J. Virol. 74:11247-11253, 2000), we investigated the ability to exchange IHNV glycoprotein G with that of VHSV. Thus, the IHNV genome was modified so that the VHSV G gene replaced the complete IHNV G gene. A recombinant virus expressing VHSV G instead of IHNV G, rIHNV-Gvhsv, was generated and was shown to replicate as well as the wild-type rIHNV in cell culture. This study was extended by exchanging IHNV G with that of a fish vesiculovirus able to replicate at high temperatures (up to 28 degrees C), the spring viremia of carp virus (SVCV). rIHNV-Gsvcv was successfully recovered; however, its growth was restricted to 14 to 20 degrees C. These results show the nonspecific sequence requirement for the insertion of heterologous glycoproteins into IHNV virions and also demonstrate that an IHNV protein other than the G protein is responsible for the low-temperature restriction on growth. To determine to what extent the matrix (M) protein interacts with G, a series of chimeric pIHNV constructs in which all or part of the M gene was replaced with the VHSV counterpart was engineered and used to recover the respective recombinant viruses. Despite the very low percentage (38%) of amino acid identity between the IHNV and VHSV matrix proteins, viable chimeric IHNVs, harboring either the matrix protein or both the glycoprotein and the matrix protein from VHSV, were recovered and propagated. Altogether, these data show the extreme flexibility of IHNV to accommodate heterologous structural proteins. (+info)Studies on pathogenesis following single and double infection with viral hemorrhagic septicemia virus and infectious hematopoietic necrosis virus in rainbow trout (Oncorhynchus mykiss). (4/41)
Rainbow trout (Oncorhynchus mykiss) were bath challenged with viral hemorrhagic septicemia (VHS) virus or infectious hematopoietic necrosis (IHN) virus or with both viruses simultaneously. The viral distribution and development of histologic lesions were examined using immunohistochemistry, while virus titer in kidney was determined by viral titration in cell culture. Single infections with VHS virus and IHN virus showed similar distributions of virus in internal organs. The early identification of virus in gill epithelium, 1 and 2 days postinfection (PI) for VHS virus and IHN virus, respectively, indicates that this organ is the point of entry for both viruses. The detection of VHS virus at 1 day PI and 3 days PI for IHN virus is indicative of kidney and spleen being the target organs for these viruses. A simultaneous infection of VHS virus and IHN virus resulted in both viruses establishing an infection. Further double infection did not result in a statistically significant lower titer of both viruses in kidney but a more restricted distribution of IHN virus in internal organs compared with the single infected group. The most striking finding is that, for IHN virus, virus was not detected in the brain in situ in the double-infected group. This study provides support for the conclusion that simultaneous infection with two piscine rhabdoviruses in a susceptible host results in some degree of interaction at the cell level, leading to a reduced systemic distribution of IHN virus. (+info)Influence of storage temperature on infectious hematopoietic necrosis virus detection by cell culture isolation and RT-PCR methods. (5/41)
The detection of infectious hematopoietic necrosis virus (IHNV) in infected rainbow trout Oncorhynchus mykiss and in cell culture supernatants stored under different conditions was studied. IHNV-positive fish visceral organ homogenates and cell culture supernatants were incubated at 4 and 25 degrees C. Virus titre was measured by virus isolation on epithelioma papulosum cyprini (EPC) cells and the IHNV RNA was detected by RT-PCR and semi-nested RT-PCR. The influence of repeated freezing and thawing on the virus isolation from organ homogenates and from cell culture supernatants was studied as well. It was possible to isolate the virus from IHNV-positive organ material during the 3 d of incubation at 4 degrees C but, only on the first day of incubation at 25 degrees C. Viral RNA could be amplified during the incubation period of 35 d at 4 degrees C but only during 8 d of incubation at 25 degrees C. In IHNV-infected cell culture supernatant stored at 4 degrees C, it was possible to detect virus for 36 and 16 d in supernatant stored at 25 degrees C. Viral RNA could be followed by using molecular methods during the entire experimental period of 123 d. Each cycle of freezing and thawing of samples resulted in a reduction of IHNV titre in the suspension of visceral organs, while the virus titre in cell culture supernatant remained almost the same following 33 freezing-thawing cycles. The present results show that rapid laboratory processing and storage of potentially virus-containing tissue samples as well as the use of different detection methods are very important for efficient IHNV diagnosis. (+info)Phylogeography of infectious haematopoietic necrosis virus in North America. (6/41)
Infectious hematopoietic necrosis virus (IHNV) is a rhabdoviral pathogen that infects wild and cultured salmonid fish throughout the Pacific Northwest of North America. IHNV causes severe epidemics in young fish and can cause disease or occur asymptomatically in adults. In a broad survey of 323 IHNV field isolates, sequence analysis of a 303 nucleotide variable region within the glycoprotein gene revealed a maximum nucleotide diversity of 8.6 %, indicating low genetic diversity overall for this virus. Phylogenetic analysis revealed three major virus genogroups, designated U, M and L, which varied in topography and geographical range. Intragenogroup genetic diversity measures indicated that the M genogroup had three- to fourfold more diversity than the other genogroups and suggested relatively rapid evolution of the M genogroup and stasis within the U genogroup. We speculate that factors influencing IHNV evolution may have included ocean migration ranges of their salmonid host populations and anthropogenic effects associated with fish culture. (+info)Molecular epidemiology of infectious hematopoietic necrosis virus reveals complex virus traffic and evolution within southern Idaho aquaculture. (7/41)
Infectious hematopoietic necrosis virus (IHNV) is a rhabdovirus which infects salmon and trout and may cause disease with up to 90% mortality. In the Hagerman Valley of Idaho, IHNV is endemic or epidemic among numerous fish farms and resource mitigation hatcheries. A previous study characterizing the genetic diversity among 84 IHNV isolates at 4 virus-endemic rainbow trout farms indicated that multiple lineages of relatively high diversity co-circulated at these facilities (Troyer et al. 2000 J Gen Virol. 81:2823-2832). We tested the hypothesis that high IHNV genetic diversity and co-circulating lineages are present in aquaculture facilities throughout this region. In this study, 73 virus isolates from 14 rainbow trout farms and 3 state hatcheries in the Hagerman Valley, isolated between 1978 and 1999, were genetically characterized by sequence analysis of a 303 nucleotide region of the glycoprotein gene. Phylogenetic and epidemiological analyses showed that multiple IHNV lineages co-circulate in a complex pattern throughout private trout farms and state hatcheries in the valley. IHNV maintained within the valley appears to have evolved significantly over the 22 yr study period. (+info)Two distinct phylogenetic clades of infectious hematopoietic necrosis virus overlap within the Columbia River basin. (8/41)
Infectious hematopoietic necrosis virus (IHNV), an aquatic rhabdovirus, causes a highly lethal disease of salmonid fish in North America. To evaluate the genetic diversity of IHNV from throughout the Columbia River basin, excluding the Hagerman Valley, Idaho, the sequences of a 303 nt region of the glycoprotein gene (mid-G) of 120 virus isolates were determined. Sequence comparisons revealed 30 different sequence types, with a maximum nucleotide diversity of 7.3% (22 mismatches) and an intrapopulational nucleotide diversity of 0.018. This indicates that the genetic diversity of IHNV within the Columbia River basin is 3-fold higher than in Alaska, but 2-fold lower than in the Hagerman Valley, Idaho. Phylogenetic analyses separated the Columbia River basin IHNV isolates into 2 major clades, designated U and M. The 2 clades geographically overlapped within the lower Columbia River basin and in the lower Snake River and tributaries, while the upper Columbia River basin had only U clade and the upper Snake River basin had only M clade virus types. These results suggest that there are co-circulating lineages of IHNV present within specific areas of the Columbia River basin. The epidemiological significance of these findings provided insight into viral traffic patterns exhibited by IHNV in the Columbia River basin, with specific relevance to how the Columbia River basin IHNV types were related to those in the Hagerman Valley. These analyses indicate that there have likely been 2 historical events in which Hagerman Valley IHNV types were introduced and became established in the lower Columbia River basin. However, the data also clearly indicates that the Hagerman Valley is not a continuous source of waterborne virus infecting salmonid stocks downstream. (+info)Infectious Hematopoietic Necrosis Virus (IHNV) is a species of negative-sense single-stranded RNA virus that belongs to the family Novirhabdoviridae. It is the causative agent of infectious hematopoietic necrosis (IHN), a serious and highly contagious disease in salmonid fish such as rainbow trout, sockeye salmon, and Atlantic salmon.
The virus primarily infects the hematopoietic tissue in the kidney, spleen, and liver of the host fish, leading to necrosis (cell death) and subsequent damage to the immune system. IHNV can cause significant mortality rates in infected fish populations, particularly in young fish, and poses a major threat to the aquaculture industry.
IHNV is transmitted horizontally through direct contact with infected fish or their bodily fluids, as well as vertically from infected broodstock to offspring. The virus can also be spread through contaminated water, equipment, and other fomites. Prevention and control measures include strict biosecurity protocols, vaccination of fish stocks, and the use of disinfectants to eliminate the virus from contaminated surfaces and equipment.
Rhabdoviridae is a family of negative-sense, single-stranded RNA viruses that include several important human and animal pathogens. The name "Rhabdoviridae" comes from the Greek word "rhabdos," meaning rod, which refers to the characteristic bullet shape of these virions.
The family Rhabdoviridae is divided into six genera: Vesiculovirus, Lyssavirus, Ephemerovirus, Novirhabdovirus, Cytorhabdovirus, and Sphericalvirus. The most well-known member of this family is the rabies virus, which belongs to the genus Lyssavirus.
Rhabdoviruses have a simple structure, consisting of an envelope surrounding a helical nucleocapsid that contains the RNA genome. The virions are typically 100-430 nm in length and 45-100 nm in diameter, with a central electron-dense core surrounded by a less dense matrix protein layer.
Rhabdoviruses infect a wide range of hosts, including mammals, birds, fish, reptiles, and insects. They typically cause acute infections characterized by fever, lethargy, and other nonspecific symptoms. In severe cases, rhabdovirus infections can lead to serious neurological disorders, such as encephalitis or meningitis, and can be fatal if left untreated.
Transmission of rhabdoviruses occurs through various routes, depending on the specific virus and host. For example, rabies virus is typically transmitted through the bite of an infected animal, while other rhabdoviruses may be spread through contact with contaminated bodily fluids or aerosols.
Prevention and control measures for rhabdovirus infections depend on the specific virus and host. For example, rabies vaccination is effective in preventing infection in humans and animals, while other rhabdoviruses may be controlled through quarantine measures, insect control, or antiviral therapy.
Rhabdoviruses are negative-sense, single-stranded RNA viruses that belong to the family Rhabdoviridae. They have a wide host range, including humans, and can cause various diseases.
Rhabdoviridae infections refer to the infectious diseases caused by rhabdoviruses. The most well-known member of this family is the rabies virus, which causes rabies, a fatal zoonotic disease that affects warm-blooded animals, including humans. Rabies is transmitted through the saliva of infected animals, usually via bites or scratches.
Other rhabdoviruses can also cause human diseases, such as:
1. Vesicular stomatitis virus (VSV): It primarily affects livestock, causing vesicular lesions in the mouth and on the feet. However, it can also infect humans, causing flu-like symptoms or a rash around the mouth and hands.
2. Chandipura virus: This rhabdovirus is associated with acute encephalitis, particularly in children. It is transmitted through mosquitoes and has been identified in several countries, including India and Nigeria.
3. Human basalotid fibroblast growth factor (bFGF) receptor-binding virus: This recently discovered rhabdovirus was found to be associated with a case of acute respiratory illness. More research is needed to understand its epidemiology, transmission, and clinical significance.
Prevention and control measures for Rhabdoviridae infections include vaccination against rabies, public education on avoiding contact with potentially infected animals, and personal protective measures such as wearing gloves when handling animals or their tissues.
"Fish diseases" is a broad term that refers to various health conditions and infections affecting fish populations in aquaculture, ornamental fish tanks, or wild aquatic environments. These diseases can be caused by bacteria, viruses, fungi, parasites, or environmental factors such as water quality, temperature, and stress.
Some common examples of fish diseases include:
1. Bacterial diseases: Examples include furunculosis (caused by Aeromonas salmonicida), columnaris disease (caused by Flavobacterium columnare), and enteric septicemia of catfish (caused by Edwardsiella ictaluri).
2. Viral diseases: Examples include infectious pancreatic necrosis virus (IPNV) in salmonids, viral hemorrhagic septicemia virus (VHSV), and koi herpesvirus (KHV).
3. Fungal diseases: Examples include saprolegniasis (caused by Saprolegnia spp.) and cotton wool disease (caused by Aphanomyces spp.).
4. Parasitic diseases: Examples include ichthyophthirius multifiliis (Ich), costia, trichodina, and various worm infestations such as anchor worms (Lernaea spp.) and tapeworms (Diphyllobothrium spp.).
5. Environmental diseases: These are caused by poor water quality, temperature stress, or other environmental factors that weaken the fish's immune system and make them more susceptible to infections. Examples include osmoregulatory disorders, ammonia toxicity, and low dissolved oxygen levels.
It is essential to diagnose and treat fish diseases promptly to prevent their spread among fish populations and maintain healthy aquatic ecosystems. Preventative measures such as proper sanitation, water quality management, biosecurity practices, and vaccination can help reduce the risk of fish diseases in both farmed and ornamental fish settings.
Oncorhynchus mykiss is the scientific name for a species of fish that is commonly known as the Rainbow Trout. According to the medical or clinical definition provided by the US National Library of Medicine, Oncorhynchus mykiss is "a freshwater fish that is widely cultured and an important food source in many parts of the world." It is also a popular game fish and is often stocked in lakes and rivers for recreational fishing. Rainbow trout are native to cold-water tributaries that flow into the Pacific Ocean in Asia and North America. They have been introduced widely throughout the world and can now be found in freshwater systems on every continent except Antarctica. Rainbow trout are a valuable species for both commercial and recreational fisheries, and they also play an important role in the food web as both predators and prey.
Densovirinae is a subfamily of single-stranded DNA viruses that primarily infect arthropods, including insects and crustaceans. These viruses are non-enveloped and have an icosahedral symmetry with a diameter of approximately 20-25 nanometers. The genome of Densovirinae is circular and encodes for several proteins involved in replication, capsid formation, and host cell manipulation.
Densoviruses, the viruses belonging to this subfamily, can cause diseases in their arthropod hosts, leading to developmental abnormalities, decreased fertility, and even death. However, they are not known to infect humans or other mammals and are not associated with any human diseases.
It's worth noting that Densovirinae is a subfamily of the family Parvoviridae, which also includes the subfamily Parvovirinae, whose members can infect vertebrates, including humans.
I'm sorry for any confusion, but "Salmon" is not a medical term. It is a common name for various species of fish that belong to the family Salmonidae and are known for their distinctive pink or red flesh. They are an important source of food and are popular in many cuisines around the world. If you have any questions about medical terminology, I'd be happy to help with those instead!
"Salmonidae" is not a medical term. It is a biological term that refers to a family of fish which includes salmon, trout, char, grayling, and whitefish. These fish are often anadromous, meaning they are born in fresh water, migrate to the ocean, then return to fresh water to reproduce. They are important both commercially and recreationally as a source of food and sport fishing.
Aquaculture is the controlled cultivation and farming of aquatic organisms, such as fish, crustaceans, mollusks, and aquatic plants, in both freshwater and saltwater environments. It involves the breeding, rearing, and harvesting of these organisms under controlled conditions to produce food, feed, recreational resources, and other products for human use. Aquaculture can take place in a variety of systems, including ponds, raceways, tanks, and cages, and it is an important source of protein and livelihoods for many people around the world.
Tragacanth is a natural exudate obtained from the trunk and branches of several species of Middle Eastern leguminous plants, mainly Astragalus gummifer and A. adscendens. It's a complex mixture of polysaccharides and has been used in various medical and pharmaceutical applications due to its thickening, suspending, emulsifying, and stabilizing properties.
In the medical field, tragacanth is often used as an excipient or component in the formulation of oral medications, particularly in the production of controlled-release tablets and capsules. It can also be found in some dental products, cosmetics, and food additives, mainly as a thickener, binder, or emulsifier.
It's important to note that although tragacanth has been used in medical applications for centuries, its use has declined over time due to the development of synthetic alternatives with more consistent properties.
I apologize for any confusion, but "Salmoniformes" is not a medical term. It is a taxonomic category in biology, specifically an order of ray-finned fishes that includes salmon, trout, char, and related species. These fish are characterized by their adapted bodies for freshwater and saltwater living, and their important role in both commercial and recreational fishing.
Novirhabdovirus is not a medical term, but a taxonomic designation for a genus of viruses within the family Rhabdoviridae. These viruses are characterized by having a bullet-shaped virion and a single-stranded, negative-sense RNA genome. They infect a variety of hosts, including fish and birds, and can cause serious diseases. However, they are not known to infect humans or pose a direct threat to human health.
I'm sorry for any confusion, but "trout" is not a term typically used in medical definitions. Trout is a common name that refers to several species of freshwater fish belonging to the salmonid family. If you have any questions related to medical terminology or health concerns, I would be happy to try and help answer those for you.
Infectious pancreatic necrosis (IPN) is a viral disease that primarily affects young salmonid fish, such as salmon and trout. The IPN virus, also known as Salmonid alphavirus (SAV), is the causative agent of this disease. It is an enveloped, positive-sense single-stranded RNA virus belonging to the family Alphaflexiviridae and genus Alphavirus.
The IPN virus primarily targets the exocrine pancreas, leading to severe necrosis (tissue death) in infected fish. The infection can also spread to other organs, including the liver, kidney, and heart. Infected fish may exhibit various clinical signs such as lethargy, loss of appetite, darkening of the skin, abnormal swimming behavior, and exophthalmia (bulging eyes).
The IPN virus is highly contagious and can be transmitted horizontally through direct contact with infected fish or their bodily fluids. It can also be vertically transmitted from infected broodstock to their offspring. The disease can have significant economic impacts on the aquaculture industry, leading to high mortality rates in affected fish populations.
Prevention and control measures for IPN include vaccination of broodstock and fry, biosecurity practices, and quarantine procedures. There is no specific treatment for IPN, and antibiotics are generally not effective against viral infections. Supportive care, such as providing optimal water quality and nutrition, can help affected fish recover from the disease.
A viral vaccine is a biological preparation that introduces your body to a specific virus in a way that helps your immune system build up protection against the virus without causing the illness. Viral vaccines can be made from weakened or inactivated forms of the virus, or parts of the virus such as proteins or sugars. Once introduced to the body, the immune system recognizes the virus as foreign and produces an immune response, including the production of antibodies. These antibodies remain in the body and provide immunity against future infection with that specific virus.
Viral vaccines are important tools for preventing infectious diseases caused by viruses, such as influenza, measles, mumps, rubella, polio, hepatitis A and B, rabies, rotavirus, chickenpox, shingles, and some types of cancer. Vaccination programs have led to the control or elimination of many infectious diseases that were once common.
It's important to note that viral vaccines are not effective against bacterial infections, and separate vaccines must be developed for each type of virus. Additionally, because viruses can mutate over time, it is necessary to update some viral vaccines periodically to ensure continued protection.
I believe there may be a misunderstanding in your question. The term "fishes" is not typically used in a medical context. "Fish" or "fishes" refers to any aquatic organism belonging to the taxonomic class Actinopterygii (bony fish), Chondrichthyes (sharks and rays), or Agnatha (jawless fish).
However, if you are referring to a condition related to fish or consuming fish, there is a medical issue called scombroid fish poisoning. It's a foodborne illness caused by eating spoiled or improperly stored fish from the Scombridae family, which includes tuna, mackerel, and bonito, among others. The bacteria present in these fish can produce histamine, which can cause symptoms like skin flushing, headache, diarrhea, and itchy rash. But again, this is not related to the term "fishes" itself but rather a condition associated with consuming certain types of fish.
I apologize for any confusion, but "Penaeidae" is not a medical term. It is actually the scientific name of a family of crustaceans, specifically marine decapods, commonly known as prawns or shrimps. If you have any questions about medical terminology or concepts, I would be happy to help with those instead.
Viral genes refer to the genetic material present in viruses that contains the information necessary for their replication and the production of viral proteins. In DNA viruses, the genetic material is composed of double-stranded or single-stranded DNA, while in RNA viruses, it is composed of single-stranded or double-stranded RNA.
Viral genes can be classified into three categories: early, late, and structural. Early genes encode proteins involved in the replication of the viral genome, modulation of host cell processes, and regulation of viral gene expression. Late genes encode structural proteins that make up the viral capsid or envelope. Some viruses also have structural genes that are expressed throughout their replication cycle.
Understanding the genetic makeup of viruses is crucial for developing antiviral therapies and vaccines. By targeting specific viral genes, researchers can develop drugs that inhibit viral replication and reduce the severity of viral infections. Additionally, knowledge of viral gene sequences can inform the development of vaccines that stimulate an immune response to specific viral proteins.
Virulence, in the context of medicine and microbiology, refers to the degree or severity of damage or harm that a pathogen (like a bacterium, virus, fungus, or parasite) can cause to its host. It is often associated with the ability of the pathogen to invade and damage host tissues, evade or suppress the host's immune response, replicate within the host, and spread between hosts.
Virulence factors are the specific components or mechanisms that contribute to a pathogen's virulence, such as toxins, enzymes, adhesins, and capsules. These factors enable the pathogen to establish an infection, cause tissue damage, and facilitate its transmission between hosts. The overall virulence of a pathogen can be influenced by various factors, including host susceptibility, environmental conditions, and the specific strain or species of the pathogen.
Glycoproteins are complex proteins that contain oligosaccharide chains (glycans) covalently attached to their polypeptide backbone. These glycans are linked to the protein through asparagine residues (N-linked) or serine/threonine residues (O-linked). Glycoproteins play crucial roles in various biological processes, including cell recognition, cell-cell interactions, cell adhesion, and signal transduction. They are widely distributed in nature and can be found on the outer surface of cell membranes, in extracellular fluids, and as components of the extracellular matrix. The structure and composition of glycoproteins can vary significantly depending on their function and location within an organism.
A viral RNA (ribonucleic acid) is the genetic material found in certain types of viruses, as opposed to viruses that contain DNA (deoxyribonucleic acid). These viruses are known as RNA viruses. The RNA can be single-stranded or double-stranded and can exist as several different forms, such as positive-sense, negative-sense, or ambisense RNA. Upon infecting a host cell, the viral RNA uses the host's cellular machinery to translate the genetic information into proteins, leading to the production of new virus particles and the continuation of the viral life cycle. Examples of human diseases caused by RNA viruses include influenza, COVID-19 (SARS-CoV-2), hepatitis C, and polio.
Antibodies, viral are proteins produced by the immune system in response to an infection with a virus. These antibodies are capable of recognizing and binding to specific antigens on the surface of the virus, which helps to neutralize or destroy the virus and prevent its replication. Once produced, these antibodies can provide immunity against future infections with the same virus.
Viral antibodies are typically composed of four polypeptide chains - two heavy chains and two light chains - that are held together by disulfide bonds. The binding site for the antigen is located at the tip of the Y-shaped structure, formed by the variable regions of the heavy and light chains.
There are five classes of antibodies in humans: IgA, IgD, IgE, IgG, and IgM. Each class has a different function and is distributed differently throughout the body. For example, IgG is the most common type of antibody found in the bloodstream and provides long-term immunity against viruses, while IgA is found primarily in mucous membranes and helps to protect against respiratory and gastrointestinal infections.
In addition to their role in the immune response, viral antibodies can also be used as diagnostic tools to detect the presence of a specific virus in a patient's blood or other bodily fluids.
Viral proteins are the proteins that are encoded by the viral genome and are essential for the viral life cycle. These proteins can be structural or non-structural and play various roles in the virus's replication, infection, and assembly process. Structural proteins make up the physical structure of the virus, including the capsid (the protein shell that surrounds the viral genome) and any envelope proteins (that may be present on enveloped viruses). Non-structural proteins are involved in the replication of the viral genome and modulation of the host cell environment to favor viral replication. Overall, a thorough understanding of viral proteins is crucial for developing antiviral therapies and vaccines.
Phylogeny is the evolutionary history and relationship among biological entities, such as species or genes, based on their shared characteristics. In other words, it refers to the branching pattern of evolution that shows how various organisms have descended from a common ancestor over time. Phylogenetic analysis involves constructing a tree-like diagram called a phylogenetic tree, which depicts the inferred evolutionary relationships among organisms or genes based on molecular sequence data or other types of characters. This information is crucial for understanding the diversity and distribution of life on Earth, as well as for studying the emergence and spread of diseases.
A cell line is a culture of cells that are grown in a laboratory for use in research. These cells are usually taken from a single cell or group of cells, and they are able to divide and grow continuously in the lab. Cell lines can come from many different sources, including animals, plants, and humans. They are often used in scientific research to study cellular processes, disease mechanisms, and to test new drugs or treatments. Some common types of human cell lines include HeLa cells (which come from a cancer patient named Henrietta Lacks), HEK293 cells (which come from embryonic kidney cells), and HUVEC cells (which come from umbilical vein endothelial cells). It is important to note that cell lines are not the same as primary cells, which are cells that are taken directly from a living organism and have not been grown in the lab.
Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.
A base sequence in the context of molecular biology refers to the specific order of nucleotides in a DNA or RNA molecule. In DNA, these nucleotides are adenine (A), guanine (G), cytosine (C), and thymine (T). In RNA, uracil (U) takes the place of thymine. The base sequence contains genetic information that is transcribed into RNA and ultimately translated into proteins. It is the exact order of these bases that determines the genetic code and thus the function of the DNA or RNA molecule.