Cellular uptake of extracellular materials within membrane-limited vacuoles or microvesicles. ENDOSOMES play a central role in endocytosis.
The main structural coat protein of COATED VESICLES which play a key role in the intracellular transport between membranous organelles. Each molecule of clathrin consists of three light chains (CLATHRIN LIGHT CHAINS) and three heavy chains (CLATHRIN HEAVY CHAINS) that form a structure called a triskelion. Clathrin also interacts with cytoskeletal proteins.
A family of high molecular weight GTP phosphohydrolases that play a direct role in vesicle transport. They associate with microtubule bundles (MICROTUBULES) and are believed to produce mechanical force via a process linked to GTP hydrolysis. This enzyme was formerly listed as EC
Vesicles formed when cell-membrane coated pits (COATED PITS, CELL-MEMBRANE) invaginate and pinch off. The outer surface of these vesicles is covered with a lattice-like network of the protein CLATHRIN. Shortly after formation, however, the clathrin coat is removed and the vesicles are referred to as ENDOSOMES.
Cytoplasmic vesicles formed when COATED VESICLES shed their CLATHRIN coat. Endosomes internalize macromolecules bound by receptors on the cell surface.
Specialized regions of the cell membrane composed of pits coated with a bristle covering made of the protein CLATHRIN. These pits are the entry route for macromolecules bound by cell surface receptors. The pits are then internalized into the cytoplasm to form the COATED VESICLES.
A subtype of dynamin found primarily in the NEURONS of the brain.
An adaptor protein complex primarily involved in the formation of clathrin-related endocytotic vesicles (ENDOSOMES) at the CELL MEMBRANE.
A subtype of dynamin found ubiquitously expressed in a variety of tissues.
An iron-binding beta1-globulin that is synthesized in the LIVER and secreted into the blood. It plays a central role in the transport of IRON throughout the circulation. A variety of transferrin isoforms exist in humans, including some that are considered markers for specific disease states.
The lipid- and protein-containing, selectively permeable membrane that surrounds the cytoplasm in prokaryotic and eukaryotic cells.
A genetically related subfamily of RAB GTP-BINDING PROTEINS involved in transport from the cell membrane to early endosomes. This enzyme was formerly listed as EC
The process of moving proteins from one cellular compartment (including extracellular) to another by various sorting and transport mechanisms such as gated transport, protein translocation, and vesicular transport.
Endocytic/exocytic CELL MEMBRANE STRUCTURES rich in glycosphingolipids, cholesterol, and lipid-anchored membrane proteins that function in ENDOCYTOSIS (potocytosis), transcytosis, and SIGNAL TRANSDUCTION. Caveolae assume various shapes from open pits to closed vesicles. Caveolar coats are composed of CAVEOLINS.
The heavy chain subunits of clathrin.
The engulfing of liquids by cells by a process of invagination and closure of the cell membrane to form fluid-filled vacuoles.
A class of morphologically heterogeneous cytoplasmic particles in animal and plant tissues characterized by their content of hydrolytic enzymes and the structure-linked latency of these enzymes. The intracellular functions of lysosomes depend on their lytic potential. The single unit membrane of the lysosome acts as a barrier between the enzymes enclosed in the lysosome and the external substrate. The activity of the enzymes contained in lysosomes is limited or nil unless the vesicle in which they are enclosed is ruptured. Such rupture is supposed to be under metabolic (hormonal) control. (From Rieger et al., Glossary of Genetics: Classical and Molecular, 5th ed)
An LDL-RECEPTOR RELATED PROTEIN found in the neuroepithelium and in proximal tubular cells of the kidney. It is considered a multiligand receptor in that it binds to a variety of ligands with relatively high affinity and may function in mediating the uptake and lysosomal degradation of macromolecules such as: LIPOPROTEINS; ENDOPEPTIDASES; and PROTEASE INHIBITORS.
A class of proteins involved in the transport of molecules via TRANSPORT VESICLES. They perform functions such as binding to the cell membrane, capturing cargo molecules and promoting the assembly of CLATHRIN. The majority of adaptor proteins exist as multi-subunit complexes, however monomeric varieties have also been found.
Established cell cultures that have the potential to propagate indefinitely.
Membrane glycoproteins found in high concentrations on iron-utilizing cells. They specifically bind iron-bearing transferrin, are endocytosed with its ligand and then returned to the cell surface where transferrin without its iron is released.
Membrane-bound compartments which contain transmitter molecules. Synaptic vesicles are concentrated at presynaptic terminals. They actively sequester transmitter molecules from the cytoplasm. In at least some synapses, transmitter release occurs by fusion of these vesicles with the presynaptic membrane, followed by exocytosis of their contents.
A family of large adaptin protein subunits of approximately 100 kDa in size. They have been primarily found as components of ADAPTOR PROTEIN COMPLEX 2.
Cellular release of material within membrane-limited vesicles by fusion of the vesicles with the CELL MEMBRANE.
Pyridinium compounds are organic salts formed when pyridine, a basic heterocyclic organic compound, reacts with acids, resulting in a positively charged nitrogen atom surrounded by aromatic rings.
Microscopy of specimens stained with fluorescent dye (usually fluorescein isothiocyanate) or of naturally fluorescent materials, which emit light when exposed to ultraviolet or blue light. Immunofluorescence microscopy utilizes antibodies that are labeled with fluorescent dye.
Vesicles that are involved in shuttling cargo from the interior of the cell to the cell surface, from the cell surface to the interior, across the cell or around the cell to various locations.
Regulatory proteins that down-regulate phosphorylated G-protein membrane receptors, including rod and cone photoreceptors and adrenergic receptors.
Cells propagated in vitro in special media conducive to their growth. Cultured cells are used to study developmental, morphologic, metabolic, physiologic, and genetic processes, among others.
Enzymes that hydrolyze GTP to GDP. EC 3.6.1.-.
Cell surface proteins that bind signalling molecules external to the cell with high affinity and convert this extracellular event into one or more intracellular signals that alter the behavior of the target cell (From Alberts, Molecular Biology of the Cell, 2nd ed, pp693-5). Cell surface receptors, unlike enzymes, do not chemically alter their ligands.
The process in which substances, either endogenous or exogenous, bind to proteins, peptides, enzymes, protein precursors, or allied compounds. Specific protein-binding measures are often used as assays in diagnostic assessments.
The intracellular transfer of information (biological activation/inhibition) through a signal pathway. In each signal transduction system, an activation/inhibition signal from a biologically active molecule (hormone, neurotransmitter) is mediated via the coupling of a receptor/enzyme to a second messenger system or to an ion channel. Signal transduction plays an important role in activating cellular functions, cell differentiation, and cell proliferation. Examples of signal transduction systems are the GAMMA-AMINOBUTYRIC ACID-postsynaptic receptor-calcium ion channel system, the receptor-mediated T-cell activation pathway, and the receptor-mediated activation of phospholipases. Those coupled to membrane depolarization or intracellular release of calcium include the receptor-mediated activation of cytotoxic functions in granulocytes and the synaptic potentiation of protein kinase activation. Some signal transduction pathways may be part of larger signal transduction pathways; for example, protein kinase activation is part of the platelet activation signal pathway.
Proteins which are found in membranes including cellular and intracellular membranes. They consist of two types, peripheral and integral proteins. They include most membrane-associated enzymes, antigenic proteins, transport proteins, and drug, hormone, and lectin receptors.
A light microscopic technique in which only a small spot is illuminated and observed at a time. An image is constructed through point-by-point scanning of the field in this manner. Light sources may be conventional or laser, and fluorescence or transmitted observations are possible.
The movement of materials (including biochemical substances and drugs) through a biological system at the cellular level. The transport can be across cell membranes and epithelial layers. It also can occur within intracellular compartments and extracellular compartments.
Filamentous proteins that are the main constituent of the thin filaments of muscle fibers. The filaments (known also as filamentous or F-actin) can be dissociated into their globular subunits; each subunit is composed of a single polypeptide 375 amino acids long. This is known as globular or G-actin. In conjunction with MYOSINS, actin is responsible for the contraction and relaxation of muscle.
An enzyme isolated from horseradish which is able to act as an antigen. It is frequently used as a histochemical tracer for light and electron microscopy. Its antigenicity has permitted its use as a combined antigen and marker in experimental immunology.
The prototypical phenothiazine antipsychotic drug. Like the other drugs in this class chlorpromazine's antipsychotic actions are thought to be due to long-term adaptation by the brain to blocking DOPAMINE RECEPTORS. Chlorpromazine has several other actions and therapeutic uses, including as an antiemetic and in the treatment of intractable hiccup.
A tyrosine phosphoprotein that plays an essential role in CAVEOLAE formation. It binds CHOLESTEROL and is involved in LIPIDS transport, membrane traffic, and SIGNAL TRANSDUCTION.
Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations.
A broad category of proteins involved in the formation, transport and dissolution of TRANSPORT VESICLES. They play a role in the intracellular transport of molecules contained within membrane vesicles. Vesicular transport proteins are distinguished from MEMBRANE TRANSPORT PROTEINS, which move molecules across membranes, by the mode in which the molecules are transported.
Recombinant proteins produced by the GENETIC TRANSLATION of fused genes formed by the combination of NUCLEIC ACID REGULATORY SEQUENCES of one or more genes with the protein coding sequences of one or more genes.
Compounds of the general formula R:N.NR2, as resulting from the action of hydrazines with aldehydes or ketones. (Grant & Hackh's Chemical Dictionary, 5th ed)
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION.
The first continuously cultured human malignant CELL LINE, derived from the cervical carcinoma of Henrietta Lacks. These cells are used for VIRUS CULTIVATION and antitumor drug screening assays.
A complex of polyene antibiotics obtained from Streptomyces filipinensis. Filipin III alters membrane function by interfering with membrane sterols, inhibits mitochondrial respiration, and is proposed as an antifungal agent. Filipins I, II, and IV are less important.
The uptake of naked or purified DNA by CELLS, usually meaning the process as it occurs in eukaryotic cells. It is analogous to bacterial transformation (TRANSFORMATION, BACTERIAL) and both are routinely employed in GENE TRANSFER TECHNIQUES.
A family of medium adaptin protein subunits of approximately 45 KDa in size. They have been primarily found as components of ADAPTOR PROTEIN COMPLEX 3 and ADAPTOR PROTEIN COMPLEX 4.
Derivatives of ammonium compounds, NH4+ Y-, in which all four of the hydrogens bonded to nitrogen have been replaced with hydrocarbyl groups. These are distinguished from IMINES which are RN=CR2.
The entering of cells by viruses following VIRUS ATTACHMENT. This is achieved by ENDOCYTOSIS, by direct MEMBRANE FUSION of the viral membrane with the CELL MEMBRANE, or by translocation of the whole virus across the cell membrane.
A subfamily in the family MURIDAE, comprising the hamsters. Four of the more common genera are Cricetus, CRICETULUS; MESOCRICETUS; and PHODOPUS.
The rate dynamics in chemical or physical systems.
Detergent-insoluble CELL MEMBRANE components. They are enriched in SPHINGOLIPIDS and CHOLESTEROL and clustered with glycosyl-phosphatidylinositol (GPI)-anchored proteins.
Protein analogs and derivatives of the Aequorea victoria green fluorescent protein that emit light (FLUORESCENCE) when excited with ULTRAVIOLET RAYS. They are used in REPORTER GENES in doing GENETIC TECHNIQUES. Numerous mutants have been made to emit other colors or be sensitive to pH.
A C-type lectin that is a cell surface receptor for ASIALOGLYCOPROTEINS. It is found primarily in the LIVER where it mediates the endocytosis of serum glycoproteins.
Microscopy using an electron beam, instead of light, to visualize the sample, thereby allowing much greater magnification. The interactions of ELECTRONS with specimens are used to provide information about the fine structure of that specimen. In TRANSMISSION ELECTRON MICROSCOPY the reactions of the electrons that are transmitted through the specimen are imaged. In SCANNING ELECTRON MICROSCOPY an electron beam falls at a non-normal angle on the specimen and the image is derived from the reactions occurring above the plane of the specimen.
The level of protein structure in which combinations of secondary protein structures (alpha helices, beta sheets, loop regions, and motifs) pack together to form folded shapes called domains. Disulfide bridges between cysteines in two different parts of the polypeptide chain along with other interactions between the chains play a role in the formation and stabilization of tertiary structure. Small proteins usually consist of only one domain but larger proteins may contain a number of domains connected by segments of polypeptide chain which lack regular secondary structure.
Endogenous glycoproteins from which SIALIC ACID has been removed by the action of sialidases. They bind tightly to the ASIALOGLYCOPROTEIN RECEPTOR which is located on hepatocyte plasma membranes. After internalization by adsorptive ENDOCYTOSIS they are delivered to LYSOSOMES for degradation. Therefore receptor-mediated clearance of asialoglycoproteins is an important aspect of the turnover of plasma glycoproteins. They are elevated in serum of patients with HEPATIC CIRRHOSIS or HEPATITIS.
A large family of MONOMERIC GTP-BINDING PROTEINS that play a key role in cellular secretory and endocytic pathways. EC 3.6.1.-.
CELL LINES derived from the CV-1 cell line by transformation with a replication origin defective mutant of SV40 VIRUS, which codes for wild type large T antigen (ANTIGENS, POLYOMAVIRUS TRANSFORMING). They are used for transfection and cloning. (The CV-1 cell line was derived from the kidney of an adult male African green monkey (CERCOPITHECUS AETHIOPS).)
CELL LINE derived from the ovary of the Chinese hamster, Cricetulus griseus (CRICETULUS). The species is a favorite for cytogenetic studies because of its small chromosome number. The cell line has provided model systems for the study of genetic alterations in cultured mammalian cells.
Any spaces or cavities within a cell. They may function in digestion, storage, secretion, or excretion.
A family of proteins that play a role as cofactors in the process of CLATHRIN recycling in cells.
Theoretical representations that simulate the behavior or activity of biological processes or diseases. For disease models in living animals, DISEASE MODELS, ANIMAL is available. Biological models include the use of mathematical equations, computers, and other electronic equipment.
Transport proteins that carry specific substances in the blood or across cell membranes.
Agents that emit light after excitation by light. The wave length of the emitted light is usually longer than that of the incident light. Fluorochromes are substances that cause fluorescence in other substances, i.e., dyes used to mark or label other compounds with fluorescent tags.
Commonly observed structural components of proteins formed by simple combinations of adjacent secondary structures. A commonly observed structure may be composed of a CONSERVED SEQUENCE which can be represented by a CONSENSUS SEQUENCE.
The light chain subunits of clathrin.
A subclass of clathrin assembly proteins that occur as monomers.
Orientation of intracellular structures especially with respect to the apical and basolateral domains of the plasma membrane. Polarized cells must direct proteins from the Golgi apparatus to the appropriate domain since tight junctions prevent proteins from diffusing between the two domains.
A family of pheromone receptors that were initially discovered in SACCHAROMYCES CEREVISIAE as proteins necessary for fungal conjugation. Each mating factor receptor is expressed in HAPLOID CELLS of a single mating type.
A set of protein subcomplexes involved in PROTEIN SORTING of UBIQUITINATED PROTEINS into intraluminal vesicles of MULTIVESICULAR BODIES and in membrane scission during formation of intraluminal vesicles, during the final step of CYTOKINESIS, and during the budding of enveloped viruses. The ESCRT machinery is comprised of the protein products of Class E vacuolar protein sorting genes.
A species of CERCOPITHECUS containing three subspecies: C. tantalus, C. pygerythrus, and C. sabeus. They are found in the forests and savannah of Africa. The African green monkey (C. pygerythrus) is the natural host of SIMIAN IMMUNODEFICIENCY VIRUS and is used in AIDS research.
A partitioning within cells due to the selectively permeable membranes which enclose each of the separate parts, e.g., mitochondria, lysosomes, etc.
A molecule that binds to another molecule, used especially to refer to a small molecule that binds specifically to a larger molecule, e.g., an antigen binding to an antibody, a hormone or neurotransmitter binding to a receptor, or a substrate or allosteric effector binding to an enzyme. Ligands are also molecules that donate or accept a pair of electrons to form a coordinate covalent bond with the central metal atom of a coordination complex. (From Dorland, 27th ed)
The main structural proteins of CAVEOLAE. Several distinct genes for caveolins have been identified.
A subtype of dynamin found expressed exclusively in the testis, lung and brain.
Incorporation of biotinyl groups into molecules.
A foul-smelling diamine formed by bacterial decarboxylation of lysine.
A family of large adaptin protein complex subunits of approximately 90-130 kDa in size.
'Nerve tissue proteins' are specialized proteins found within the nervous system's biological tissue, including neurofilaments, neuronal cytoskeletal proteins, and neural cell adhesion molecules, which facilitate structural support, intracellular communication, and synaptic connectivity essential for proper neurological function.
The network of filaments, tubules, and interconnecting filamentous bridges which give shape, structure, and organization to the cytoplasm.
Reduced (protonated) form of THIAZOLES. They can be oxidized to THIAZOLIDINEDIONES.
A genetically related subfamily of RAB GTP-BINDING PROTEINS involved in recycling of proteins such as cell surface receptors from early endosomes to the cell surface. This enzyme was formerly listed as EC
New World marsupials of the family Didelphidae. Opossums are omnivorous, largely nocturnal and arboreal MAMMALS, grow to about three feet in length, including the scaly prehensile tail, and have an abdominal pouch in which the young are carried at birth.
The ability of a substrate to retain an electrical charge.
The introduction of a phosphoryl group into a compound through the formation of an ester bond between the compound and a phosphorus moiety.
A large family of phosphatidylinositol phosphate-binding proteins that are involved in mediating intracellular transport and sorting of proteins via a variety of endocytic pathways.
An acidifying agent that has expectorant and diuretic effects. Also used in etching and batteries and as a flux in electroplating.
A broad category of carrier proteins that play a role in SIGNAL TRANSDUCTION. They generally contain several modular domains, each of which having its own binding activity, and act by forming complexes with other intracellular-signaling molecules. Signal-transducing adaptor proteins lack enzyme activity, however their activity can be modulated by other signal-transducing enzymes
An antiprotozoal agent produced by Streptomyces cinnamonensis. It exerts its effect during the development of first-generation trophozoites into first-generation schizonts within the intestinal epithelial cells. It does not interfere with hosts' development of acquired immunity to the majority of coccidial species. Monensin is a sodium and proton selective ionophore and is widely used as such in biochemical studies.
A cell line generated from human embryonic kidney cells that were transformed with human adenovirus type 5.
A stack of flattened vesicles that functions in posttranslational processing and sorting of proteins, receiving them from the rough ENDOPLASMIC RETICULUM and directing them to secretory vesicles, LYSOSOMES, or the CELL MEMBRANE. The movement of proteins takes place by transfer vesicles that bud off from the rough endoplasmic reticulum or Golgi apparatus and fuse with the Golgi, lysosomes or cell membrane. (From Glick, Glossary of Biochemistry and Molecular Biology, 1990)
A complex of seven proteins including ARP2 PROTEIN and ARP3 PROTEIN that plays an essential role in maintenance and assembly of the CYTOSKELETON. Arp2-3 complex binds WASP PROTEIN and existing ACTIN FILAMENTS, and it nucleates the formation of new branch point filaments.
The part of a cell that contains the CYTOSOL and small structures excluding the CELL NUCLEUS; MITOCHONDRIA; and large VACUOLES. (Glick, Glossary of Biochemistry and Molecular Biology, 1990)
MONOMERIC GTP-BINDING PROTEINS that were initially recognized as allosteric activators of the MONO(ADP-RIBOSE) TRANSFERASE of the CHOLERA TOXIN catalytic subunit. They are involved in vesicle trafficking and activation of PHOSPHOLIPASE D. This enzyme was formerly listed as EC
Proteins obtained from the species SACCHAROMYCES CEREVISIAE. The function of specific proteins from this organism are the subject of intense scientific interest and have been used to derive basic understanding of the functioning similar proteins in higher eukaryotes.
Monomeric subunits of primarily globular ACTIN and found in the cytoplasmic matrix of almost all cells. They are often associated with microtubules and may play a role in cytoskeletal function and/or mediate movement of the cell or the organelles within the cell.
The prototypical antimalarial agent with a mechanism that is not well understood. It has also been used to treat rheumatoid arthritis, systemic lupus erythematosus, and in the systemic therapy of amebic liver abscesses.
The act of ligating UBIQUITINS to PROTEINS to form ubiquitin-protein ligase complexes to label proteins for transport to the PROTEASOME ENDOPEPTIDASE COMPLEX where proteolysis occurs.
Elements of limited time intervals, contributing to particular results or situations.
Fluorescent probe capable of being conjugated to tissue and proteins. It is used as a label in fluorescent antibody staining procedures as well as protein- and amino acid-binding techniques.
Proteins which are involved in the phenomenon of light emission in living systems. Included are the "enzymatic" and "non-enzymatic" types of system with or without the presence of oxygen or co-factors.
The distal terminations of axons which are specialized for the release of neurotransmitters. Also included are varicosities along the course of axons which have similar specializations and also release transmitters. Presynaptic terminals in both the central and peripheral nervous systems are included.
The adherence and merging of cell membranes, intracellular membranes, or artificial membranes to each other or to viruses, parasites, or interstitial particles through a variety of chemical and physical processes.
A cytochrome oxidase inhibitor which is a nitridizing agent and an inhibitor of terminal oxidation. (From Merck Index, 12th ed)
Small double-stranded, non-protein coding RNAs (21-31 nucleotides) involved in GENE SILENCING functions, especially RNA INTERFERENCE (RNAi). Endogenously, siRNAs are generated from dsRNAs (RNA, DOUBLE-STRANDED) by the same ribonuclease, Dicer, that generates miRNAs (MICRORNAS). The perfect match of the siRNAs' antisense strand to their target RNAs mediates RNAi by siRNA-guided RNA cleavage. siRNAs fall into different classes including trans-acting siRNA (tasiRNA), repeat-associated RNA (rasiRNA), small-scan RNA (scnRNA), and Piwi protein-interacting RNA (piRNA) and have different specific gene silencing functions.
A protein phytotoxin from the seeds of Ricinus communis, the castor oil plant. It agglutinates cells, is proteolytic, and causes lethal inflammation and hemorrhage if taken internally.
A LDL-receptor related protein involved in clearance of chylomicron remnants and of activated ALPHA-MACROGLOBULINS from plasma.
Cyclic GLUCANS consisting of seven (7) glucopyranose units linked by 1,4-glycosidic bonds.
A highly conserved 76-amino acid peptide universally found in eukaryotic cells that functions as a marker for intracellular PROTEIN TRANSPORT and degradation. Ubiquitin becomes activated through a series of complicated steps and forms an isopeptide bond to lysine residues of specific proteins within the cell. These "ubiquitinated" proteins can be recognized and degraded by proteosomes or be transported to specific compartments within the cell.
The normality of a solution with respect to HYDROGEN ions; H+. It is related to acidity measurements in most cases by pH = log 1/2[1/(H+)], where (H+) is the hydrogen ion concentration in gram equivalents per liter of solution. (McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
A species of the genus SACCHAROMYCES, family Saccharomycetaceae, order Saccharomycetales, known as "baker's" or "brewer's" yeast. The dried form is used as a dietary supplement.
Microscopy in which the samples are first stained immunocytochemically and then examined using an electron microscope. Immunoelectron microscopy is used extensively in diagnostic virology as part of very sensitive immunoassays.
A negative regulatory effect on physiological processes at the molecular, cellular, or systemic level. At the molecular level, the major regulatory sites include membrane receptors, genes (GENE EXPRESSION REGULATION), mRNAs (RNA, MESSENGER), and proteins.
Proto-oncogene proteins that negatively regulate RECEPTOR PROTEIN-TYROSINE KINASE signaling. It is a UBIQUITIN-PROTEIN LIGASE and the cellular homologue of ONCOGENE PROTEIN V-CBL.
The basic cellular units of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the NERVOUS SYSTEM.
Receptors on the plasma membrane of nonhepatic cells that specifically bind LDL. The receptors are localized in specialized regions called coated pits. Hypercholesteremia is caused by an allelic genetic defect of three types: 1, receptors do not bind to LDL; 2, there is reduced binding of LDL; and 3, there is normal binding but no internalization of LDL. In consequence, entry of cholesterol esters into the cell is impaired and the intracellular feedback by cholesterol on 3-hydroxy-3-methylglutaryl CoA reductase is lacking.
Specific particles of membrane-bound organized living substances present in eukaryotic cells, such as the MITOCHONDRIA; the GOLGI APPARATUS; ENDOPLASMIC RETICULUM; LYSOSOMES; PLASTIDS; and VACUOLES.
A fungal metabolite that blocks cytoplasmic cleavage by blocking formation of contractile microfilament structures resulting in multinucleated cell formation, reversible inhibition of cell movement, and the induction of cellular extrusion. Additional reported effects include the inhibition of actin polymerization, DNA synthesis, sperm motility, glucose transport, thyroid secretion, and growth hormone release.
Electron microscopy in which the ELECTRONS or their reaction products that pass down through the specimen are imaged below the plane of the specimen.
The property of objects that determines the direction of heat flow when they are placed in direct thermal contact. The temperature is the energy of microscopic motions (vibrational and translational) of the particles of atoms.
A gene silencing phenomenon whereby specific dsRNAs (RNA, DOUBLE-STRANDED) trigger the degradation of homologous mRNA (RNA, MESSENGER). The specific dsRNAs are processed into SMALL INTERFERING RNA (siRNA) which serves as a guide for cleavage of the homologous mRNA in the RNA-INDUCED SILENCING COMPLEX. DNA METHYLATION may also be triggered during this process.
The renal tubule portion that extends from the BOWMAN CAPSULE in the KIDNEY CORTEX into the KIDNEY MEDULLA. The proximal tubule consists of a convoluted proximal segment in the cortex, and a distal straight segment descending into the medulla where it forms the U-shaped LOOP OF HENLE.
A cell surface receptor involved in regulation of cell growth and differentiation. It is specific for EPIDERMAL GROWTH FACTOR and EGF-related peptides including TRANSFORMING GROWTH FACTOR ALPHA; AMPHIREGULIN; and HEPARIN-BINDING EGF-LIKE GROWTH FACTOR. The binding of ligand to the receptor causes activation of its intrinsic tyrosine kinase activity and rapid internalization of the receptor-ligand complex into the cell.
Proteins that originate from insect species belonging to the genus DROSOPHILA. The proteins from the most intensely studied species of Drosophila, DROSOPHILA MELANOGASTER, are the subject of much interest in the area of MORPHOGENESIS and development.
A clathrin adaptor protein complex primarily involved in clathrin-related transport at the TRANS-GOLGI NETWORK.
Connective tissue cells which secrete an extracellular matrix rich in collagen and other macromolecules.
Regions of AMINO ACID SEQUENCE similarity in the SRC-FAMILY TYROSINE KINASES that fold into specific functional tertiary structures. The SH1 domain is a CATALYTIC DOMAIN. SH2 and SH3 domains are protein interaction domains. SH2 usually binds PHOSPHOTYROSINE-containing proteins and SH3 interacts with CYTOSKELETAL PROTEINS.
A class of saturated compounds consisting of two rings only, having two or more atoms in common, containing at least one hetero atom, and that take the name of an open chain hydrocarbon containing the same total number of atoms. (From Riguady et al., Nomenclature of Organic Chemistry, 1979, p31)
A group of glucose polymers made by certain bacteria. Dextrans are used therapeutically as plasma volume expanders and anticoagulants. They are also commonly used in biological experimentation and in industry for a wide variety of purposes.
The aggregation of soluble ANTIGENS with ANTIBODIES, alone or with antibody binding factors such as ANTI-ANTIBODIES or STAPHYLOCOCCAL PROTEIN A, into complexes large enough to fall out of solution.
Cell surface receptors that respond to PHEROMONES.
A fungal metabolite which is a macrocyclic lactone exhibiting a wide range of antibiotic activity.
A diverse class of enzymes that interact with UBIQUITIN-CONJUGATING ENZYMES and ubiquitination-specific protein substrates. Each member of this enzyme group has its own distinct specificity for a substrate and ubiquitin-conjugating enzyme. Ubiquitin-protein ligases exist as both monomeric proteins multiprotein complexes.

Endocytosis: EH domains lend a hand. (1/10563)

A number of proteins that have been implicated in endocytosis feature a conserved protein-interaction module known as an EH domain. The three-dimensional structure of an EH domain has recently been solved, and is likely to presage significant advances in understanding molecular mechanisms of endocytosis.  (+info)

Arrestin function in G protein-coupled receptor endocytosis requires phosphoinositide binding. (2/10563)

Internalization of agonist-activated G protein-coupled receptors is mediated by non-visual arrestins, which also bind to clathrin and are therefore thought to act as adaptors in the endocytosis process. Phosphoinositides have been implicated in the regulation of intracellular receptor trafficking, and are known to bind to other coat components including AP-2, AP180 and COPI coatomer. Given these observations, we explored the possibility that phosphoinositides play a role in arrestin's function as an adaptor. High-affinity binding sites for phosphoinositides in beta-arrestin (arrestin2) and arrestin3 (beta-arrestin2) were identified, and dissimilar effects of phosphoinositide and inositol phosphate on arrestin interactions with clathrin and receptor were characterized. Alteration of three basic residues in arrestin3 abolished phosphoinositide binding with complete retention of clathrin and receptor binding. Unlike native protein, upon agonist activation, this mutant arrestin3 expressed in COS1 cells neither supported beta2-adrenergic receptor internalization nor did it concentrate in coated pits, although it was recruited to the plasma membrane. These findings indicate that phosphoinositide binding plays a critical regulatory role in delivery of the receptor-arrestin complex to coated pits, perhaps by providing, with activated receptor, a multi-point attachment of arrestin to the plasma membrane.  (+info)

A cytomegalovirus glycoprotein re-routes MHC class I complexes to lysosomes for degradation. (3/10563)

Mouse cytomegalovirus (MCMV) early gene expression interferes with the major histocompatibility complex class I (MHC class I) pathway of antigen presentation. Here we identify a 48 kDa type I transmembrane glycoprotein encoded by the MCMV early gene m06, which tightly binds to properly folded beta2-microglobulin (beta2m)-associated MHC class I molecules in the endoplasmic reticulum (ER). This association is mediated by the lumenal/transmembrane part of the protein. gp48-MHC class I complexes are transported out of the ER, pass the Golgi, but instead of being expressed on the cell surface, they are redirected to the endocytic route and rapidly degraded in a Lamp-1(+) compartment. As a result, m06-expressing cells are impaired in presenting antigenic peptides to CD8(+) T cells. The cytoplasmic tail of gp48 contains two di-leucine motifs. Mutation of the membrane-proximal di-leucine motif of gp48 restored surface expression of MHC class I, while mutation of the distal one had no effect. The results establish a novel viral mechanism for downregulation of MHC class I molecules by directly binding surface-destined MHC complexes and exploiting the cellular di-leucine sorting machinery for lysosomal degradation.  (+info)

The optically determined size of exo/endo cycling vesicle pool correlates with the quantal content at the neuromuscular junction of Drosophila larvae. (4/10563)

According to the current theory of synaptic transmission, the amplitude of evoked synaptic potentials correlates with the number of synaptic vesicles released at the presynaptic terminals. Synaptic vesicles in presynaptic boutons constitute two distinct pools, namely, exo/endo cycling and reserve pools (). We defined the vesicles that were endocytosed and exocytosed during high K+ stimulation as the exo/endo cycling vesicle pool. To determine the role of exo/endo cycling vesicle pool in synaptic transmission, we estimated the quantal content electrophysiologically, whereas the pool size was determined optically using fluorescent dye FM1-43. We then manipulated the size of the pool with following treatments. First, to change the state of boutons of nerve terminals, motoneuronal axons were severed. With this treatment, the size of exo/endo cycling vesicle pool decreased together with the quantal content. Second, we promoted the FM1-43 uptake using cyclosporin A, which inhibits calcineurin activities and enhances endocytosis. Cyclosporin A increased the total uptake of FM1-43, but neither the size of exo/endo cycling vesicle pool nor the quantal content changed. Third, we increased the size of exo/endo cycling vesicle pool by forskolin, which enhances synaptic transmission. The forskolin treatment increased both the size of exo/endo cycling vesicle pool and the quantal content. Thus, we found that the quantal content was closely correlated with the size of exo/endo cycling vesicle pool but not necessarily with the total uptake of FM1-43 fluorescence by boutons. The results suggest that vesicles in the exo/endo cycling pool primarily participate in evoked exocytosis of vesicles.  (+info)

Identification of low density lipoprotein receptor-related protein-2/megalin as an endocytic receptor for seminal vesicle secretory protein II. (5/10563)

The low density lipoprotein receptor-related protein-2/megalin (LRP-2) is an endocytic receptor that is expressed on the apical surfaces of epithelial cells lining specific regions of the male and female reproductive tracts. In the present study, immunohistochemical staining revealed that LRP-2 is also expressed by epithelial cells lining the ductal region and the ampulla of the rat seminal vesicle. To identify LRP-2 ligands in the seminal vesicle, we probed seminal vesicle fluid with 125I-labeled LRP-2 in a gel-blot overlay assay. A 100-kDa protein (under non-reducing conditions) was found to bind the radiolabeled receptor. The protein was isolated and subjected to protease digestion, and the proteolytic fragments were subjected to mass spectroscopic sequence analysis. As a result, the 100-kDa protein was identified as the seminal vesicle secretory protein II (SVS-II), a major constituent of the seminal coagulum. Using purified preparations of SVS-II and LRP-2, solid-phase binding assays were used to show that the SVS-II bound to the receptor with high affinity (Kd = 5.6 nM). The binding of SVS-II to LRP-2 was inhibited using a known antagonist of LRP-2 function, the 39-kDa receptor-associated protein RAP. Using a series of recombinant subfragments of SVS-II, the LRP-2 binding site was mapped to a stretch of repeated 13-residue modules located in the central portion of the SVS-II polypeptide. To evaluate the ability of LRP-2 to mediate 125I-SVS-II endocytosis and lysosomal degradation, ligand clearance assays were performed using differentiated mouse F9 cells, which express high levels of LRP-2. Radiolabeled SVS-II was internalized and degraded by the cells, and both processes were inhibited by antibodies to LRP-2 or by RAP. The results indicate that LRP-2 binds SVS-II and can mediate its endocytosis leading to lysosomal degradation.  (+info)

5'-Nucleotidase activity of mouse peritoneal macrophages. II. Cellular distribution and effects of endocytosis. (6/10563)

The diazonium salt of sulfanilic acid (DASA) can inactivate about 80% of the total 5'-nucleotidase of viable macrophages. The remaining 20% can be inactivated if the cells are first lysed in detergent, and presumably represents an intracellular pool of 5'-nucleotidase. The bulk of this pool may represent cytoplasmic vesicles derived from plasma membrane by endocytosis. This internal compartment is expanded up to threefold immediately after the cells have ingested a large latex load. This is consistent with previous observations on the internalization of 5'-nucleotidase in latex phagosomes. In latex-filled cells this intracellular pool of enzyme is inactivated over a few hours, and the cells then slowly increase their enzyme activity to nearly normal levels. However, 24 h after latex ingestion the metabolism of 5'-nucleotidase in these recovered cells is abnormal, as the rate of enzyme degradation is about twice the normal rate, and the DASA-insensitive enzyme pool in these cells is strikingly diminished. This may reflect effects of the accumulated indigestible particles on the fate of incoming pinocytic vesicles or on newly synthesized plasma membrane precursor. Another endocytic stimulus, concanavalin A, also reduces the total cell 5'-nucleotidase activity. This effect, which is time and temperature dependent, can be prevented by the competitive sugar alpha-methyl mannose. The concanavalin A inhibition can be reversed in the absence of new protein synthesis or in cells cultivated in serum-free conditions. It is not known whether the effect of concanavalin A on 5'-nucleotidase depends upon the interiorizaiton of plasma membrane or is strictly associated with events at the cell surface.  (+info)

PETA-3/CD151, a member of the transmembrane 4 superfamily, is localised to the plasma membrane and endocytic system of endothelial cells, associates with multiple integrins and modulates cell function. (7/10563)

The Transmembrane 4 Superfamily member, PETA-3/CD151, is ubiquitously expressed by endothelial cells in vivo. In cultured human umbilical vein endothelial cells PETA-3 is present on the plasma membrane and predominantly localises to regions of cell-cell contact. Additionally, this protein is abundant within an intracellular compartment which accounts for up to 66% of the total PETA-3 expressed. Intracellular PETA-3 showed colocalisation with transferrin receptor and CD63 suggesting an endosomal/lysosomal localisation which was supported by immuno-electronmicroscopy studies. Co-immunoprecipitation experiments investigating possible interactions of PETA-3 with other molecules demonstrated associations with several integrin chains including beta1, beta3, beta4, (alpha)2, (alpha)3, (alpha)5, (alpha)6 and provide the first report of Transmembrane 4 Superfamily association with the (alpha)6beta4 integrin. Using 2-colour confocal microscopy, we demonstrated similar localisation of PETA-3 and integrin chains within cytoplasmic vesicles and endothelial cell junctions. In order to assess the functional implications of PETA-3/integrin associations, the effect of anti-PETA-3 antibodies on endothelial function was examined. Anti-PETA-3 mAb inhibited endothelial cell migration and modulated in vitro angiogenesis, but had no detectable effect on neutrophil transendothelial migration. The broad range of integrin associations and the presence of PETA-3 with integrins both on the plasma membrane and within intracellular vesicles, suggests a primary role for PETA-3 in regulating integrin trafficking and/or function.  (+info)

CFTR channel insertion to the apical surface in rat duodenal villus epithelial cells is upregulated by VIP in vivo. (8/10563)

cAMP activated insertion of the cystic fibrosis transmembrane conductance regulator (CFTR) channels from endosomes to the apical plasma membrane has been hypothesized to regulate surface expression and CFTR function although the physiologic relevance of this remains unclear. We previously identified a subpopulation of small intestinal villus epithelial cells or CFTR high expressor (CHE) cells possessing very high levels of apical membrane CFTR in association with a prominent subapical vesicular pool of CFTR. We have examined the subcellular redistribution of CFTR in duodenal CHE cells in vivo in response to the cAMP activated secretagogue vasoactive intestinal peptide (VIP). Using anti-CFTR antibodies against the C terminus of rodent CFTR and indirect immunofluorescence, we show by quantitative confocal microscopy that CFTR rapidly redistributes from the cytoplasm to the apical surface upon cAMP stimulation by VIP and returns to the cytoplasm upon removal of VIP stimulation of intracellular cAMP levels. Using ultrastructural and confocal immunofluorescence examination in the presence or absence of cycloheximide, we also show that redistribution was not dependent on new protein synthesis, changes in endocytosis, or rearrangement of the apical cytoskeleton. These observations suggest that physiologic cAMP activated apical membrane insertion and recycling of CFTR channels in normal CFTR expressing epithelia contributes to the in vivo regulation of CFTR mediated anion transport.  (+info)

Endocytosis is the process by which cells absorb substances from their external environment by engulfing them in membrane-bound structures, resulting in the formation of intracellular vesicles. This mechanism allows cells to take up large molecules, such as proteins and lipids, as well as small particles, like bacteria and viruses. There are two main types of endocytosis: phagocytosis (cell eating) and pinocytosis (cell drinking). Phagocytosis involves the engulfment of solid particles, while pinocytosis deals with the uptake of fluids and dissolved substances. Other specialized forms of endocytosis include receptor-mediated endocytosis and caveolae-mediated endocytosis, which allow for the specific internalization of molecules through the interaction with cell surface receptors.

Clathrin is a type of protein that plays a crucial role in the formation of coated vesicles within cells. These vesicles are responsible for transporting materials between different cellular compartments, such as from the plasma membrane to the endoplasmic reticulum or Golgi apparatus. Clathrin molecules form a lattice-like structure that curves around the vesicle, providing stability and shape to the coated vesicle. This process is known as clathrin-mediated endocytosis.

The formation of clathrin-coated vesicles begins with the recruitment of clathrin proteins to specific sites on the membrane, where they assemble into a polygonal lattice structure. As more clathrin molecules join the assembly, the lattice curves and eventually pinches off from the membrane, forming a closed vesicle. The clathrin coat then disassembles, releasing the vesicle to continue with its intracellular transport mission.

Disruptions in clathrin-mediated endocytosis can lead to various cellular dysfunctions and diseases, including neurodegenerative disorders and certain types of cancer.

Dynamins are a family of large GTPase proteins that play important roles in membrane trafficking processes, such as endocytosis and vesicle budding. They are involved in the constriction and separation of membranes during these events by forming helical structures around the necks of budding vesicles and hydrolyzing GTP to provide the mechanical force required for membrane fission. Dynamins have also been implicated in other cellular processes, including cytokinesis, actin dynamics, and maintenance of mitochondrial morphology. There are three main isoforms of dynamin in mammals: dynamin 1, dynamin 2, and dynamin 3, which differ in their expression patterns, subcellular localization, and functions.

Clathrin-coated vesicles are small, membrane-bound structures that play a crucial role in intracellular transport within eukaryotic cells. They are formed by the coating of the plasma membrane or the membranes of other organelles with a lattice-like structure made up of clathrin proteins.

The formation of clathrin-coated vesicles is initiated when adaptor proteins recognize and bind to specific signals on the cytoplasmic side of the membrane. These adaptor proteins then recruit clathrin molecules, which assemble into a cage-like structure that deforms the membrane into a spherical shape. The vesicle then pinches off from the membrane, enclosed in its clathrin coat.

Once formed, clathrin-coated vesicles can transport proteins and other molecules between different cellular compartments, such as from the plasma membrane to endosomes or from the Golgi apparatus to the endoplasmic reticulum. The clathrin coat is subsequently disassembled, allowing the vesicle to fuse with its target membrane and release its contents.

Defects in clathrin-coated vesicle function have been implicated in a variety of human diseases, including neurodegenerative disorders and certain forms of cancer.

Endosomes are membrane-bound compartments within eukaryotic cells that play a critical role in intracellular trafficking and sorting of various cargoes, including proteins and lipids. They are formed by the invagination of the plasma membrane during endocytosis, resulting in the internalization of extracellular material and cell surface receptors.

Endosomes can be classified into early endosomes, late endosomes, and recycling endosomes based on their morphology, molecular markers, and functional properties. Early endosomes are the initial sorting stations for internalized cargoes, where they undergo sorting and processing before being directed to their final destinations. Late endosomes are more acidic compartments that mature from early endosomes and are responsible for the transport of cargoes to lysosomes for degradation.

Recycling endosomes, on the other hand, are involved in the recycling of internalized cargoes back to the plasma membrane or to other cellular compartments. Endosomal sorting and trafficking are regulated by a complex network of molecular interactions involving various proteins, lipids, and intracellular signaling pathways.

Defects in endosomal function have been implicated in various human diseases, including neurodegenerative disorders, developmental abnormalities, and cancer. Therefore, understanding the mechanisms underlying endosomal trafficking and sorting is of great importance for developing therapeutic strategies to treat these conditions.

Coated pits are specialized regions on the cell membrane that are involved in the process of endocytosis. They are called "coated" pits because they are covered or coated with a layer of proteins and clathrin molecules, which form a lattice-like structure that helps to shape and invaginate the membrane inward, forming a vesicle.

Coated pits play an important role in regulating cellular uptake of various substances, such as nutrients, hormones, and receptors. Once the coated pit has pinched off from the cell membrane, it becomes a coated vesicle, which can then fuse with other intracellular compartments to deliver its contents.

The formation of coated pits is a highly regulated process that involves the recruitment of specific proteins and adaptors to the site of endocytosis. Defects in this process have been implicated in various diseases, including neurodevelopmental disorders and cancer.

Dynamin I is a large GTPase protein that is primarily expressed in the brain and is involved in the regulation of synaptic vesicle recycling and endocytosis. It is a member of the dynamin family of proteins, which also includes dynamin II and dynamin III. Dynamin I is encoded by the DNM1 gene in humans.

Dynamin I plays a critical role in the process of synaptic vesicle recycling by mediating the scission or pinching off of newly formed vesicles from the plasma membrane during endocytosis. This process allows for the reuse of synaptic vesicles, which is essential for maintaining neurotransmission and communication between neurons.

Mutations in the DNM1 gene have been associated with neurological disorders such as epilepsy, intellectual disability, and developmental delay. Additionally, changes in dynamin I expression and activity have been implicated in various forms of synaptic plasticity, which is the ability of synapses to strengthen or weaken over time in response to experience or learning.

Adaptor Protein Complex 2 (AP-2) is a protein complex that plays a crucial role in the formation of clathrin-coated vesicles, which are involved in intracellular trafficking and transport of membrane proteins and lipids. The AP-2 complex is composed of four subunits: alpha, beta, mu, and sigma, which form a heterotetrameric structure. It functions as a bridge between the clathrin lattice and the cytoplasmic domains of membrane proteins, such as transmembrane receptors, that are destined for endocytosis. The AP-2 complex recognizes specific sorting signals within the cytoplasmic tails of these membrane proteins, leading to their recruitment into forming clathrin-coated pits and subsequent internalization via clathrin-coated vesicles. This process is essential for various cellular functions, including receptor-mediated endocytosis, synaptic vesicle recycling, and membrane protein trafficking.

Dynamin II is a protein that belongs to the dynamin family, which are large GTPases involved in various cellular processes such as membrane trafficking and cytokinesis. Dynamin II is widely expressed in different tissues and plays a crucial role in endocytosis, particularly in clathrin-mediated endocytosis.

In this process, dynamin II functions as a mechanoenzyme that constricts and ultimately severs the neck of invaginated vesicles from the plasma membrane, allowing for the internalization of extracellular cargo into the cell. Dynamin II is also involved in other cellular processes such as intracellular vesicle trafficking, organelle division, and actin dynamics regulation.

Mutations in the gene encoding dynamin II (DNM2) have been associated with several human genetic disorders, including centronuclear myopathy, Charcot-Marie-Tooth disease type 4B1, and dominant intermediate laminopathies. These mutations can lead to abnormal protein function or expression levels, resulting in disrupted cellular processes and causing muscle weakness, peripheral neuropathy, and other clinical manifestations.

Transferrin is a glycoprotein that plays a crucial role in the transport and homeostasis of iron in the body. It's produced mainly in the liver and has the ability to bind two ferric (Fe3+) ions in its N-lobe and C-lobe, thus creating transferrin saturation.

This protein is essential for delivering iron to cells while preventing the harmful effects of free iron, which can catalyze the formation of reactive oxygen species through Fenton reactions. Transferrin interacts with specific transferrin receptors on the surface of cells, particularly in erythroid precursors and brain endothelial cells, to facilitate iron uptake via receptor-mediated endocytosis.

In addition to its role in iron transport, transferrin also has antimicrobial properties due to its ability to sequester free iron, making it less available for bacterial growth and survival. Transferrin levels can be used as a clinical marker of iron status, with decreased levels indicating iron deficiency anemia and increased levels potentially signaling inflammation or liver disease.

A cell membrane, also known as the plasma membrane, is a thin semi-permeable phospholipid bilayer that surrounds all cells in animals, plants, and microorganisms. It functions as a barrier to control the movement of substances in and out of the cell, allowing necessary molecules such as nutrients, oxygen, and signaling molecules to enter while keeping out harmful substances and waste products. The cell membrane is composed mainly of phospholipids, which have hydrophilic (water-loving) heads and hydrophobic (water-fearing) tails. This unique structure allows the membrane to be flexible and fluid, yet selectively permeable. Additionally, various proteins are embedded in the membrane that serve as channels, pumps, receptors, and enzymes, contributing to the cell's overall functionality and communication with its environment.

Rab5 GTP-binding proteins are a subfamily of Rab (Ras-related in brain) proteins that function as molecular switches in the regulation of intracellular membrane trafficking. They play a crucial role in the early stages of endocytosis, including the formation and movement of early endosomes.

Rab5 GTP-binding proteins cycle between an active GTP-bound state and an inactive GDP-bound state. In their active form, they interact with various effector proteins to regulate vesicle transport, tethering, and fusion. Specifically, Rab5 GTP-binding proteins are involved in the homotypic fusion of early endosomes, promoting the maturation of early endosomes into late endosomes.

There are multiple isoforms of Rab5 GTP-binding proteins (Rab5A, Rab5B, and Rab5C) that share a high degree of sequence similarity but may have distinct functions in different cellular contexts. Dysregulation of Rab5 GTP-binding proteins has been implicated in various human diseases, including cancer and neurodegenerative disorders.

Protein transport, in the context of cellular biology, refers to the process by which proteins are actively moved from one location to another within or between cells. This is a crucial mechanism for maintaining proper cell function and regulation.

Intracellular protein transport involves the movement of proteins within a single cell. Proteins can be transported across membranes (such as the nuclear envelope, endoplasmic reticulum, Golgi apparatus, or plasma membrane) via specialized transport systems like vesicles and transport channels.

Intercellular protein transport refers to the movement of proteins from one cell to another, often facilitated by exocytosis (release of proteins in vesicles) and endocytosis (uptake of extracellular substances via membrane-bound vesicles). This is essential for communication between cells, immune response, and other physiological processes.

It's important to note that any disruption in protein transport can lead to various diseases, including neurological disorders, cancer, and metabolic conditions.

Caveolae are small, flask-shaped invaginations of the plasma membrane that are abundant in many cell types, including endothelial cells, adipocytes, and muscle cells. They are characterized by the presence of caveolin proteins, which play a crucial role in their formation and function.

Caveolae have been implicated in various cellular processes, such as endocytosis, signal transduction, cholesterol homeostasis, and mechanoprotection. They can also serve as platforms for the assembly of signaling complexes and the regulation of various enzymatic activities.

The invaginated structure of caveolae allows them to interact with extracellular molecules and intracellular proteins, facilitating the exchange of materials between the plasma membrane and the cytosol. Dysregulation of caveolae function has been linked to several diseases, including cardiovascular disorders, cancer, and neurological conditions.

Clathrin Heavy Chains are the major structural components of clathrin coated vesicles, which are involved in intracellular trafficking and transport of proteins and lipids between different cellular compartments. These chains combine with light chains to form triskelions, a three-legged structure that polymerizes to form a cage-like lattice surrounding the vesicle membrane during the process of vesicle formation. The heavy chains are large polypeptides with a molecular weight of approximately 190 kDa and are subject to post-translational modifications such as phosphorylation, which can regulate their function in clathrin-mediated endocytosis.

Pinocytosis is a type of cellular process involving the ingestion and absorption of extracellular fluid and dissolved substances into a cell. It is a form of endocytosis, where the cell membrane surrounds and engulfs the extracellular fluid to form a vesicle containing the fluid and its contents within the cell cytoplasm.

In pinocytosis, the cell membrane invaginates and forms small vesicles (pinocytotic vesicles) that contain extracellular fluid and dissolved substances. These vesicles then detach from the cell membrane and move into the cytoplasm, where they fuse with endosomes or lysosomes to break down and digest the contents of the vesicle.

Pinocytosis is a non-selective process that allows cells to take up small amounts of extracellular fluid and dissolved substances from their environment. It plays an important role in various physiological processes, including nutrient uptake, cell signaling, and the regulation of extracellular matrix composition.

Lysosomes are membrane-bound organelles found in the cytoplasm of eukaryotic cells. They are responsible for breaking down and recycling various materials, such as waste products, foreign substances, and damaged cellular components, through a process called autophagy or phagocytosis. Lysosomes contain hydrolytic enzymes that can break down biomolecules like proteins, nucleic acids, lipids, and carbohydrates into their basic building blocks, which can then be reused by the cell. They play a crucial role in maintaining cellular homeostasis and are often referred to as the "garbage disposal system" of the cell.

Low-Density Lipoprotein Receptor-Related Protein 2 (LRP2), also known as Megalin, is a large transmembrane protein that belongs to the low-density lipoprotein receptor family. It is primarily expressed in the epithelial cells of various organs, including the kidneys, brain, and liver.

LRP2 plays a crucial role in endocytosis and intracellular signaling by binding to a wide range of ligands, such as lipoproteins, proteases, enzyme inhibitors, and vitamins. In the kidneys, LRP2 is involved in the reabsorption of filtered proteins and the clearance of circulating substances from the primary urine.

In the central nervous system, LRP2 is essential for the development and maintenance of the brain by mediating the uptake of various molecules necessary for neuronal survival and function. Mutations in the LRP2 gene have been associated with several genetic disorders, including Donnai-Barrow syndrome and facio-oculo-acoustico-renal (FOAR) syndrome, which are characterized by developmental abnormalities affecting multiple organ systems.

Adaptor proteins play a crucial role in vesicular transport, which is the process by which materials are transported within cells in membrane-bound sacs called vesicles. These adaptor proteins serve as a bridge between vesicle membranes and cytoskeletal elements or other cellular structures, facilitating the movement of vesicles throughout the cell.

There are several different types of adaptor proteins involved in vesicular transport, each with specific functions and localizations within the cell. Some examples include:

1. Clathrin Adaptor Protein Complex (AP-1, AP-2, AP-3, AP-4): These complexes are responsible for recruiting clathrin to membranes during vesicle formation, which helps to shape and stabilize the vesicle. They also play a role in sorting cargo into specific vesicles.

2. Coat Protein Complex I (COPI): This complex is involved in the transport of proteins between the endoplasmic reticulum (ER) and the Golgi apparatus, as well as within the Golgi itself. COPI-coated vesicles are formed by the assembly of coatomer proteins around the membrane, which helps to deform the membrane into a vesicle shape.

3. Coat Protein Complex II (COPII): This complex is involved in the transport of proteins from the ER to the Golgi apparatus. COPII-coated vesicles are formed by the assembly of Sar1, Sec23/24, and Sec13/31 proteins around the membrane, which helps to select cargo and form a vesicle.

4. BAR (Bin/Amphiphysin/Rvs) Domain Proteins: These proteins are involved in shaping and stabilizing membranes during vesicle formation. They can sense and curve membranes, recruiting other proteins to help form the vesicle.

5. SNARE Proteins: While not strictly adaptor proteins, SNAREs play a critical role in vesicle fusion by forming complexes that bring the vesicle and target membrane together. These complexes provide the energy required for membrane fusion, allowing for the release of cargo into the target compartment.

Overall, adaptor proteins are essential components of the cellular machinery that regulates intracellular trafficking. They help to select cargo, deform membranes, and facilitate vesicle formation, ensuring that proteins and lipids reach their correct destinations within the cell.

A cell line is a culture of cells that are grown in a laboratory for use in research. These cells are usually taken from a single cell or group of cells, and they are able to divide and grow continuously in the lab. Cell lines can come from many different sources, including animals, plants, and humans. They are often used in scientific research to study cellular processes, disease mechanisms, and to test new drugs or treatments. Some common types of human cell lines include HeLa cells (which come from a cancer patient named Henrietta Lacks), HEK293 cells (which come from embryonic kidney cells), and HUVEC cells (which come from umbilical vein endothelial cells). It is important to note that cell lines are not the same as primary cells, which are cells that are taken directly from a living organism and have not been grown in the lab.

Transferrin receptors are membrane-bound proteins found on the surface of many cell types, including red and white blood cells, as well as various tissues such as the liver, brain, and placenta. These receptors play a crucial role in iron homeostasis by regulating the uptake of transferrin, an iron-binding protein, into the cells.

Transferrin binds to two ferric ions (Fe3+) in the bloodstream, forming a complex known as holo-transferrin. This complex then interacts with the transferrin receptors on the cell surface, leading to endocytosis of the transferrin-receptor complex into the cell. Once inside the cell, the acidic environment within the endosome causes the release of iron ions from the transferrin molecule, which can then be transported into the cytoplasm for use in various metabolic processes.

After releasing the iron, the apo-transferrin (iron-free transferrin) is recycled back to the cell surface and released back into the bloodstream, where it can bind to more ferric ions and repeat the cycle. This process helps maintain appropriate iron levels within the body and ensures that cells have access to the iron they need for essential functions such as DNA synthesis, energy production, and oxygen transport.

In summary, transferrin receptors are membrane-bound proteins responsible for recognizing and facilitating the uptake of transferrin-bound iron into cells, playing a critical role in maintaining iron homeostasis within the body.

Synaptic vesicles are tiny membrane-enclosed sacs within the presynaptic terminal of a neuron, containing neurotransmitters. They play a crucial role in the process of neurotransmission, which is the transmission of signals between nerve cells. When an action potential reaches the presynaptic terminal, it triggers the fusion of synaptic vesicles with the plasma membrane, releasing neurotransmitters into the synaptic cleft. These neurotransmitters can then bind to receptors on the postsynaptic neuron and trigger a response. After release, synaptic vesicles are recycled through endocytosis, allowing them to be refilled with neurotransmitters and used again in subsequent rounds of neurotransmission.

Adaptor Protein Complex (AP) alpha subunits are a group of proteins that play a crucial role in intracellular trafficking, specifically in the formation and transport of vesicles within cells. There are four different AP complexes (AP-1, AP-2, AP-3, and AP-4), each with its own unique set of subunits, including an alpha subunit.

The AP-1 complex, for example, is involved in the transport of proteins between the Golgi apparatus and endosomes. Its alpha subunit, AP1A1 or AP1A2, helps to recognize specific sorting signals on protein cargo and facilitates the assembly of clathrin coats around vesicles.

Similarly, the AP-2 complex is involved in clathrin-mediated endocytosis at the plasma membrane, and its alpha subunit, AP2A1 or AP2A2, helps to recruit clathrin and other accessory proteins to form coated pits.

Mutations in genes encoding for AP complex subunits have been linked to various human diseases, including neurological disorders and cancer.

Exocytosis is the process by which cells release molecules, such as hormones or neurotransmitters, to the extracellular space. This process involves the transport of these molecules inside vesicles (membrane-bound sacs) to the cell membrane, where they fuse and release their contents to the outside of the cell. It is a crucial mechanism for intercellular communication and the regulation of various physiological processes in the body.

Pyridinium compounds are organic salts that contain a positively charged pyridinium ion. Pyridinium is a type of cation that forms when pyridine, a basic heterocyclic organic compound, undergoes protonation. The nitrogen atom in the pyridine ring accepts a proton (H+) and becomes positively charged, forming the pyridinium ion.

Pyridinium compounds have the general structure of C5H5NH+X-, where X- is an anion or negatively charged ion. These compounds are often used in research and industry, including as catalysts, intermediates in chemical synthesis, and in pharmaceuticals. Some pyridinium compounds have been studied for their potential therapeutic uses, such as in the treatment of bacterial infections or cancer. However, it is important to note that some pyridinium compounds can also be toxic or reactive, so they must be handled with care.

Fluorescence microscopy is a type of microscopy that uses fluorescent dyes or proteins to highlight and visualize specific components within a sample. In this technique, the sample is illuminated with high-energy light, typically ultraviolet (UV) or blue light, which excites the fluorescent molecules causing them to emit lower-energy, longer-wavelength light, usually visible light in the form of various colors. This emitted light is then collected by the microscope and detected to produce an image.

Fluorescence microscopy has several advantages over traditional brightfield microscopy, including the ability to visualize specific structures or molecules within a complex sample, increased sensitivity, and the potential for quantitative analysis. It is widely used in various fields of biology and medicine, such as cell biology, neuroscience, and pathology, to study the structure, function, and interactions of cells and proteins.

There are several types of fluorescence microscopy techniques, including widefield fluorescence microscopy, confocal microscopy, two-photon microscopy, and total internal reflection fluorescence (TIRF) microscopy, each with its own strengths and limitations. These techniques can provide valuable insights into the behavior of cells and proteins in health and disease.

Transport vesicles are membrane-bound sacs or containers within cells that are responsible for the intracellular transport of proteins, lipids, and other cargo. These vesicles form when a portion of a donor membrane buds off, enclosing the cargo inside. There are different types of transport vesicles, including:

1. Endoplasmic reticulum (ER) vesicles: These vesicles form from the ER and transport proteins to the Golgi apparatus for further processing.
2. Golgi-derived vesicles: After proteins have been processed in the Golgi, they are packaged into transport vesicles that can deliver them to their final destinations within the cell or to the plasma membrane for secretion.
3. Endocytic vesicles: These vesicles form when a portion of the plasma membrane invaginates and pinches off, engulfing extracellular material or fluid. Examples include clathrin-coated vesicles and caveolae.
4. Lysosomal vesicles: These vesicles transport materials to lysosomes for degradation.
5. Secretory vesicles: These vesicles store proteins and other molecules that will be secreted from the cell. When stimulated, these vesicles fuse with the plasma membrane, releasing their contents to the extracellular space.

Arrestins are a family of proteins that play a crucial role in regulating G protein-coupled receptor (GPCR) signaling. There are four main types of arrestins: visual arrestin (also known as arr1 or S-arrestin), β-arrestin1 (also known as arr2 or Kon/Vec), β-arrestin2 (also known as arr3 or hTHT), and arrestin-domain containing protein 1 (ARRDC1).

Arrestins bind to the intracellular domains of activated GPCRs, which leads to several outcomes:

1. They prevent further activation of G proteins by the receptor, effectively "arresting" the signal transduction process.
2. They promote the internalization (endocytosis) of the receptor from the cell membrane into endosomes, where it can be either degraded or recycled back to the cell surface.
3. They act as scaffolds for various signaling complexes and mediate interactions between GPCRs and other intracellular signaling proteins, leading to the activation of different signaling pathways.

Overall, arrestins play a critical role in fine-tuning GPCR signaling, ensuring appropriate cellular responses to hormones, neurotransmitters, and other extracellular signals.

"Cells, cultured" is a medical term that refers to cells that have been removed from an organism and grown in controlled laboratory conditions outside of the body. This process is called cell culture and it allows scientists to study cells in a more controlled and accessible environment than they would have inside the body. Cultured cells can be derived from a variety of sources, including tissues, organs, or fluids from humans, animals, or cell lines that have been previously established in the laboratory.

Cell culture involves several steps, including isolation of the cells from the tissue, purification and characterization of the cells, and maintenance of the cells in appropriate growth conditions. The cells are typically grown in specialized media that contain nutrients, growth factors, and other components necessary for their survival and proliferation. Cultured cells can be used for a variety of purposes, including basic research, drug development and testing, and production of biological products such as vaccines and gene therapies.

It is important to note that cultured cells may behave differently than they do in the body, and results obtained from cell culture studies may not always translate directly to human physiology or disease. Therefore, it is essential to validate findings from cell culture experiments using additional models and ultimately in clinical trials involving human subjects.

GTP (Guanosine Triphosphate) Phosphohydrolases are a group of enzymes that catalyze the hydrolysis of GTP to GDP (Guanosine Diphosphate) and inorganic phosphate. This reaction plays a crucial role in regulating various cellular processes, including signal transduction pathways, protein synthesis, and vesicle trafficking.

The human genome encodes several different types of GTP Phosphohydrolases, such as GTPase-activating proteins (GAPs), GTPase effectors, and G protein-coupled receptors (GPCRs). These enzymes share a common mechanism of action, in which they utilize the energy released from GTP hydrolysis to drive conformational changes that enable them to interact with downstream effector molecules and modulate their activity.

Dysregulation of GTP Phosphohydrolases has been implicated in various human diseases, including cancer, neurodegenerative disorders, and infectious diseases. Therefore, understanding the structure, function, and regulation of these enzymes is essential for developing novel therapeutic strategies to target these conditions.

Cell surface receptors, also known as membrane receptors, are proteins located on the cell membrane that bind to specific molecules outside the cell, known as ligands. These receptors play a crucial role in signal transduction, which is the process of converting an extracellular signal into an intracellular response.

Cell surface receptors can be classified into several categories based on their structure and mechanism of action, including:

1. Ion channel receptors: These receptors contain a pore that opens to allow ions to flow across the cell membrane when they bind to their ligands. This ion flux can directly activate or inhibit various cellular processes.
2. G protein-coupled receptors (GPCRs): These receptors consist of seven transmembrane domains and are associated with heterotrimeric G proteins that modulate intracellular signaling pathways upon ligand binding.
3. Enzyme-linked receptors: These receptors possess an intrinsic enzymatic activity or are linked to an enzyme, which becomes activated when the receptor binds to its ligand. This activation can lead to the initiation of various signaling cascades within the cell.
4. Receptor tyrosine kinases (RTKs): These receptors contain intracellular tyrosine kinase domains that become activated upon ligand binding, leading to the phosphorylation and activation of downstream signaling molecules.
5. Integrins: These receptors are transmembrane proteins that mediate cell-cell or cell-matrix interactions by binding to extracellular matrix proteins or counter-receptors on adjacent cells. They play essential roles in cell adhesion, migration, and survival.

Cell surface receptors are involved in various physiological processes, including neurotransmission, hormone signaling, immune response, and cell growth and differentiation. Dysregulation of these receptors can contribute to the development of numerous diseases, such as cancer, diabetes, and neurological disorders.

Protein binding, in the context of medical and biological sciences, refers to the interaction between a protein and another molecule (known as the ligand) that results in a stable complex. This process is often reversible and can be influenced by various factors such as pH, temperature, and concentration of the involved molecules.

In clinical chemistry, protein binding is particularly important when it comes to drugs, as many of them bind to proteins (especially albumin) in the bloodstream. The degree of protein binding can affect a drug's distribution, metabolism, and excretion, which in turn influence its therapeutic effectiveness and potential side effects.

Protein-bound drugs may be less available for interaction with their target tissues, as only the unbound or "free" fraction of the drug is active. Therefore, understanding protein binding can help optimize dosing regimens and minimize adverse reactions.

Signal transduction is the process by which a cell converts an extracellular signal, such as a hormone or neurotransmitter, into an intracellular response. This involves a series of molecular events that transmit the signal from the cell surface to the interior of the cell, ultimately resulting in changes in gene expression, protein activity, or metabolism.

The process typically begins with the binding of the extracellular signal to a receptor located on the cell membrane. This binding event activates the receptor, which then triggers a cascade of intracellular signaling molecules, such as second messengers, protein kinases, and ion channels. These molecules amplify and propagate the signal, ultimately leading to the activation or inhibition of specific cellular responses.

Signal transduction pathways are highly regulated and can be modulated by various factors, including other signaling molecules, post-translational modifications, and feedback mechanisms. Dysregulation of these pathways has been implicated in a variety of diseases, including cancer, diabetes, and neurological disorders.

Membrane proteins are a type of protein that are embedded in the lipid bilayer of biological membranes, such as the plasma membrane of cells or the inner membrane of mitochondria. These proteins play crucial roles in various cellular processes, including:

1. Cell-cell recognition and signaling
2. Transport of molecules across the membrane (selective permeability)
3. Enzymatic reactions at the membrane surface
4. Energy transduction and conversion
5. Mechanosensation and signal transduction

Membrane proteins can be classified into two main categories: integral membrane proteins, which are permanently associated with the lipid bilayer, and peripheral membrane proteins, which are temporarily or loosely attached to the membrane surface. Integral membrane proteins can further be divided into three subcategories based on their topology:

1. Transmembrane proteins, which span the entire width of the lipid bilayer with one or more alpha-helices or beta-barrels.
2. Lipid-anchored proteins, which are covalently attached to lipids in the membrane via a glycosylphosphatidylinositol (GPI) anchor or other lipid modifications.
3. Monotopic proteins, which are partially embedded in the membrane and have one or more domains exposed to either side of the bilayer.

Membrane proteins are essential for maintaining cellular homeostasis and are targets for various therapeutic interventions, including drug development and gene therapy. However, their structural complexity and hydrophobicity make them challenging to study using traditional biochemical methods, requiring specialized techniques such as X-ray crystallography, nuclear magnetic resonance (NMR) spectroscopy, and single-particle cryo-electron microscopy (cryo-EM).

Confocal microscopy is a powerful imaging technique used in medical and biological research to obtain high-resolution, contrast-rich images of thick samples. This super-resolution technology provides detailed visualization of cellular structures and processes at various depths within a specimen.

In confocal microscopy, a laser beam focused through a pinhole illuminates a small spot within the sample. The emitted fluorescence or reflected light from this spot is then collected by a detector, passing through a second pinhole that ensures only light from the focal plane reaches the detector. This process eliminates out-of-focus light, resulting in sharp images with improved contrast compared to conventional widefield microscopy.

By scanning the laser beam across the sample in a raster pattern and collecting fluorescence at each point, confocal microscopy generates optical sections of the specimen. These sections can be combined to create three-dimensional reconstructions, allowing researchers to study cellular architecture and interactions within complex tissues.

Confocal microscopy has numerous applications in medical research, including studying protein localization, tracking intracellular dynamics, analyzing cell morphology, and investigating disease mechanisms at the cellular level. Additionally, it is widely used in clinical settings for diagnostic purposes, such as analyzing skin lesions or detecting pathogens in patient samples.

Biological transport refers to the movement of molecules, ions, or solutes across biological membranes or through cells in living organisms. This process is essential for maintaining homeostasis, regulating cellular functions, and enabling communication between cells. There are two main types of biological transport: passive transport and active transport.

Passive transport does not require the input of energy and includes:

1. Diffusion: The random movement of molecules from an area of high concentration to an area of low concentration until equilibrium is reached.
2. Osmosis: The diffusion of solvent molecules (usually water) across a semi-permeable membrane from an area of lower solute concentration to an area of higher solute concentration.
3. Facilitated diffusion: The assisted passage of polar or charged substances through protein channels or carriers in the cell membrane, which increases the rate of diffusion without consuming energy.

Active transport requires the input of energy (in the form of ATP) and includes:

1. Primary active transport: The direct use of ATP to move molecules against their concentration gradient, often driven by specific transport proteins called pumps.
2. Secondary active transport: The coupling of the movement of one substance down its electrochemical gradient with the uphill transport of another substance, mediated by a shared transport protein. This process is also known as co-transport or counter-transport.

Actin is a type of protein that forms part of the contractile apparatus in muscle cells, and is also found in various other cell types. It is a globular protein that polymerizes to form long filaments, which are important for many cellular processes such as cell division, cell motility, and the maintenance of cell shape. In muscle cells, actin filaments interact with another type of protein called myosin to enable muscle contraction. Actins can be further divided into different subtypes, including alpha-actin, beta-actin, and gamma-actin, which have distinct functions and expression patterns in the body.

Horseradish peroxidase (HRP) is not a medical term, but a type of enzyme that is derived from the horseradish plant. In biological terms, HRP is defined as a heme-containing enzyme isolated from the roots of the horseradish plant (Armoracia rusticana). It is widely used in molecular biology and diagnostic applications due to its ability to catalyze various oxidative reactions, particularly in immunological techniques such as Western blotting and ELISA.

HRP catalyzes the conversion of hydrogen peroxide into water and oxygen, while simultaneously converting a variety of substrates into colored or fluorescent products that can be easily detected. This enzymatic activity makes HRP a valuable tool in detecting and quantifying specific biomolecules, such as proteins and nucleic acids, in biological samples.

Chlorpromazine is a type of antipsychotic medication, also known as a phenothiazine. It works by blocking dopamine receptors in the brain, which helps to reduce the symptoms of psychosis such as hallucinations, delusions, and disordered thinking. Chlorpromazine is used to treat various mental health conditions including schizophrenia, bipolar disorder, and severe behavioral problems in children. It may also be used for the short-term management of severe anxiety or agitation, and to control nausea and vomiting.

Like all medications, chlorpromazine can have side effects, which can include drowsiness, dry mouth, blurred vision, constipation, weight gain, and sexual dysfunction. More serious side effects may include neurological symptoms such as tremors, rigidity, or abnormal movements, as well as cardiovascular problems such as low blood pressure or irregular heart rhythms. It is important for patients to be monitored closely by their healthcare provider while taking chlorpromazine, and to report any unusual symptoms or side effects promptly.

Caveolin 1 is a protein that is a key component of caveolae, which are specialized invaginations of the plasma membrane found in many cell types. Caveolae play important roles in various cellular processes, including endocytosis, cholesterol homeostasis, and signal transduction.

Caveolin 1 is a structural protein that helps to form and maintain the shape of caveolae. It also plays a role in regulating the activity of various signaling molecules that are associated with caveolae, including G proteins, receptor tyrosine kinases, and Src family kinases.

Mutations in the gene that encodes caveolin 1 have been linked to several genetic disorders, including muscular dystrophy, cardiac arrhythmias, and cancer. Additionally, changes in the expression or localization of caveolin 1 have been implicated in a variety of diseases, including diabetes, neurodegenerative disorders, and infectious diseases.

A mutation is a permanent change in the DNA sequence of an organism's genome. Mutations can occur spontaneously or be caused by environmental factors such as exposure to radiation, chemicals, or viruses. They may have various effects on the organism, ranging from benign to harmful, depending on where they occur and whether they alter the function of essential proteins. In some cases, mutations can increase an individual's susceptibility to certain diseases or disorders, while in others, they may confer a survival advantage. Mutations are the driving force behind evolution, as they introduce new genetic variability into populations, which can then be acted upon by natural selection.

Vesicular transport proteins are specialized proteins that play a crucial role in the intracellular trafficking and transportation of various biomolecules, such as proteins and lipids, within eukaryotic cells. These proteins facilitate the formation, movement, and fusion of membrane-bound vesicles, which are small, spherical structures that carry cargo between different cellular compartments or organelles.

There are several types of vesicular transport proteins involved in this process:

1. Coat Proteins (COPs): These proteins form a coat around the vesicle membrane and help shape it into its spherical form during the budding process. They also participate in selecting and sorting cargo for transportation. Two main types of COPs exist: COPI, which is involved in transport between the Golgi apparatus and the endoplasmic reticulum (ER), and COPII, which mediates transport from the ER to the Golgi apparatus.

2. SNARE Proteins: These proteins are responsible for the specific recognition and docking of vesicles with their target membranes. They form complexes that bring the vesicle and target membranes close together, allowing for fusion and the release of cargo into the target organelle. There are two types of SNARE proteins: v-SNAREs (vesicle SNAREs) and t-SNAREs (target SNAREs), which interact to form a stable complex during membrane fusion.

3. Rab GTPases: These proteins act as molecular switches that regulate the recruitment of coat proteins, motor proteins, and SNAREs during vesicle transport. They cycle between an active GTP-bound state and an inactive GDP-bound state, controlling the various stages of vesicular trafficking, such as budding, transport, tethering, and fusion.

4. Tethering Proteins: These proteins help to bridge the gap between vesicles and their target membranes before SNARE-mediated fusion occurs. They play a role in ensuring specificity during vesicle docking and may also contribute to regulating the timing of membrane fusion events.

5. Soluble N-ethylmaleimide-sensitive factor Attachment Protein Receptors (SNAREs): These proteins are involved in intracellular transport, particularly in the trafficking of vesicles between organelles. They consist of a family of coiled-coil domain-containing proteins that form complexes to mediate membrane fusion events.

Overall, these various classes of proteins work together to ensure the specificity and efficiency of vesicular transport in eukaryotic cells. Dysregulation or mutation of these proteins can lead to various diseases, including neurodegenerative disorders and cancer.

Recombinant fusion proteins are artificially created biomolecules that combine the functional domains or properties of two or more different proteins into a single protein entity. They are generated through recombinant DNA technology, where the genes encoding the desired protein domains are linked together and expressed as a single, chimeric gene in a host organism, such as bacteria, yeast, or mammalian cells.

The resulting fusion protein retains the functional properties of its individual constituent proteins, allowing for novel applications in research, diagnostics, and therapeutics. For instance, recombinant fusion proteins can be designed to enhance protein stability, solubility, or immunogenicity, making them valuable tools for studying protein-protein interactions, developing targeted therapies, or generating vaccines against infectious diseases or cancer.

Examples of recombinant fusion proteins include:

1. Etaglunatide (ABT-523): A soluble Fc fusion protein that combines the heavy chain fragment crystallizable region (Fc) of an immunoglobulin with the extracellular domain of the human interleukin-6 receptor (IL-6R). This fusion protein functions as a decoy receptor, neutralizing IL-6 and its downstream signaling pathways in rheumatoid arthritis.
2. Etanercept (Enbrel): A soluble TNF receptor p75 Fc fusion protein that binds to tumor necrosis factor-alpha (TNF-α) and inhibits its proinflammatory activity, making it a valuable therapeutic option for treating autoimmune diseases like rheumatoid arthritis, ankylosing spondylitis, and psoriasis.
3. Abatacept (Orencia): A fusion protein consisting of the extracellular domain of cytotoxic T-lymphocyte antigen 4 (CTLA-4) linked to the Fc region of an immunoglobulin, which downregulates T-cell activation and proliferation in autoimmune diseases like rheumatoid arthritis.
4. Belimumab (Benlysta): A monoclonal antibody that targets B-lymphocyte stimulator (BLyS) protein, preventing its interaction with the B-cell surface receptor and inhibiting B-cell activation in systemic lupus erythematosus (SLE).
5. Romiplostim (Nplate): A fusion protein consisting of a thrombopoietin receptor agonist peptide linked to an immunoglobulin Fc region, which stimulates platelet production in patients with chronic immune thrombocytopenia (ITP).
6. Darbepoetin alfa (Aranesp): A hyperglycosylated erythropoiesis-stimulating protein that functions as a longer-acting form of recombinant human erythropoietin, used to treat anemia in patients with chronic kidney disease or cancer.
7. Palivizumab (Synagis): A monoclonal antibody directed against the F protein of respiratory syncytial virus (RSV), which prevents RSV infection and is administered prophylactically to high-risk infants during the RSV season.
8. Ranibizumab (Lucentis): A recombinant humanized monoclonal antibody fragment that binds and inhibits vascular endothelial growth factor A (VEGF-A), used in the treatment of age-related macular degeneration, diabetic retinopathy, and other ocular disorders.
9. Cetuximab (Erbitux): A chimeric monoclonal antibody that binds to epidermal growth factor receptor (EGFR), used in the treatment of colorectal cancer and head and neck squamous cell carcinoma.
10. Adalimumab (Humira): A fully humanized monoclonal antibody that targets tumor necrosis factor-alpha (TNF-α), used in the treatment of various inflammatory diseases, including rheumatoid arthritis, psoriasis, and Crohn's disease.
11. Bevacizumab (Avastin): A recombinant humanized monoclonal antibody that binds to VEGF-A, used in the treatment of various cancers, including colorectal, lung, breast, and kidney cancer.
12. Trastuzumab (Herceptin): A humanized monoclonal antibody that targets HER2/neu receptor, used in the treatment of breast cancer.
13. Rituximab (Rituxan): A chimeric monoclonal antibody that binds to CD20 antigen on B cells, used in the treatment of non-Hodgkin's lymphoma and rheumatoid arthritis.
14. Palivizumab (Synagis): A humanized monoclonal antibody that binds to the F protein of respiratory syncytial virus, used in the prevention of respiratory syncytial virus infection in high-risk infants.
15. Infliximab (Remicade): A chimeric monoclonal antibody that targets TNF-α, used in the treatment of various inflammatory diseases, including Crohn's disease, ulcerative colitis, rheumatoid arthritis, and ankylosing spondylitis.
16. Natalizumab (Tysabri): A humanized monoclonal antibody that binds to α4β1 integrin, used in the treatment of multiple sclerosis and Crohn's disease.
17. Adalimumab (Humira): A fully human monoclonal antibody that targets TNF-α, used in the treatment of various inflammatory diseases, including rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, Crohn's disease, and ulcerative colitis.
18. Golimumab (Simponi): A fully human monoclonal antibody that targets TNF-α, used in the treatment of rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, and ulcerative colitis.
19. Certolizumab pegol (Cimzia): A PEGylated Fab' fragment of a humanized monoclonal antibody that targets TNF-α, used in the treatment of rheumatoid arthritis, psoriatic arthritis, ankylosing spondylitis, and Crohn's disease.
20. Ustekinumab (Stelara): A fully human monoclonal antibody that targets IL-12 and IL-23, used in the treatment of psoriasis, psoriatic arthritis, and Crohn's disease.
21. Secukinumab (Cosentyx): A fully human monoclonal antibody that targets IL-17A, used in the treatment of psoriasis, psoriatic arthritis, and ankylosing spondylitis.
22. Ixekizumab (Taltz): A fully human monoclonal antibody that targets IL-17A, used in the treatment of psoriasis and psoriatic arthritis.
23. Brodalumab (Siliq): A fully human monoclonal antibody that targets IL-17 receptor A, used in the treatment of psoriasis.
24. Sarilumab (Kevzara): A fully human monoclonal antibody that targets the IL-6 receptor, used in the treatment of rheumatoid arthritis.
25. Tocilizumab (Actemra): A humanized monoclonal antibody that targets the IL-6 receptor, used in the treatment of rheumatoid arthritis, systemic juvenile idiopathic arthritis, polyarticular juvenile idiopathic arthritis, giant cell arteritis, and chimeric antigen receptor T-cell-induced cytokine release syndrome.
26. Siltuximab (Sylvant): A chimeric monoclonal antibody that targets IL-6, used in the treatment of multicentric Castleman disease.
27. Satralizumab (Enspryng): A humanized monoclonal antibody that targets IL-6 receptor alpha, used in the treatment of neuromyelitis optica spectrum disorder.
28. Sirukumab (Plivensia): A human monoclonal antibody that targets IL-6, used in the treatment

A hydrazone is not a medical term per se, but rather a chemical compound. However, it's important for medical professionals to understand the properties and reactions of various chemical compounds, including hydrazones, in the context of pharmacology, toxicology, and medicinal chemistry. Here's a general definition:

Hydrazones are organic compounds that contain a functional group with the structure R1R2C=NNR3, where R1, R2, and R3 are hydrogen atoms or organic groups. They are formed by the condensation reaction of a carbonyl compound (aldehyde or ketone) with hydrazine or its derivatives. Hydrazones can exhibit various biological activities, such as antibacterial, antifungal, and anticancer properties. Some hydrazones are also used as intermediates in the synthesis of pharmaceuticals and other organic compounds.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

An amino acid sequence is the specific order of amino acids in a protein or peptide molecule, formed by the linking of the amino group (-NH2) of one amino acid to the carboxyl group (-COOH) of another amino acid through a peptide bond. The sequence is determined by the genetic code and is unique to each type of protein or peptide. It plays a crucial role in determining the three-dimensional structure and function of proteins.

HeLa cells are a type of immortalized cell line used in scientific research. They are derived from a cancer that developed in the cervical tissue of Henrietta Lacks, an African-American woman, in 1951. After her death, cells taken from her tumor were found to be capable of continuous division and growth in a laboratory setting, making them an invaluable resource for medical research.

HeLa cells have been used in a wide range of scientific studies, including research on cancer, viruses, genetics, and drug development. They were the first human cell line to be successfully cloned and are able to grow rapidly in culture, doubling their population every 20-24 hours. This has made them an essential tool for many areas of biomedical research.

It is important to note that while HeLa cells have been instrumental in numerous scientific breakthroughs, the story of their origin raises ethical questions about informed consent and the use of human tissue in research.

Filipin is not a medical term itself, but it is the name given to a group of compounds that are used in medicine and research. Medically, Filipin is often referred to as Filipin III or Filipin stain, which is a fluorescent polyene antibiotic used in the study of lipids, particularly in diagnosing certain types of lipid storage diseases such as Niemann-Pick disease type C. The Filipin stain binds to unesterified cholesterol and forms complexes that exhibit blue fluorescence under ultraviolet light. This property is used to detect the accumulation of free cholesterol in various tissues and cells, which can be indicative of certain diseases or conditions.

Transfection is a term used in molecular biology that refers to the process of deliberately introducing foreign genetic material (DNA, RNA or artificial gene constructs) into cells. This is typically done using chemical or physical methods, such as lipofection or electroporation. Transfection is widely used in research and medical settings for various purposes, including studying gene function, producing proteins, developing gene therapies, and creating genetically modified organisms. It's important to note that transfection is different from transduction, which is the process of introducing genetic material into cells using viruses as vectors.

The adaptor protein complex mu (AP-μ or AP-2) is a heterotetrameric complex that plays a crucial role in clathrin-mediated endocytosis, a process by which cells internalize various molecules from their external environment. The subunits of the AP-μ complex are:

1. AP2M1 (Adaptin-μ1): This is the μ subunit, which binds to the clathrin heavy chain and helps recruit it to the membrane during vesicle formation. It also plays a role in cargo recognition by interacting with sorting signals on transmembrane proteins.
2. AP2B1 (Adaptin-β1): This is the β subunit, which interacts with the μ and σ subunits to form the core of the complex. It also binds to accessory proteins that regulate endocytosis.
3. AP2S1 (Adaptin-σ1): This is the σ subunit, which helps stabilize the interaction between the μ and β subunits and contributes to cargo recognition by binding to specific sorting signals on transmembrane proteins.
4. AP2L1 (Adaptin-λ1): This is the λ subunit, which interacts with the α subunit of adaptor protein complex 1 (AP-1) and helps coordinate the trafficking of proteins between different endocytic compartments.

Together, these subunits form a complex that plays a central role in clathrin-mediated endocytosis by regulating the recruitment of clathrin and other accessory proteins to the membrane, as well as the recognition and sorting of cargo molecules for internalization.

Quaternary ammonium compounds (QACs) are a group of disinfectants and antiseptics that contain a nitrogen atom surrounded by four organic groups, resulting in a charged "quat" structure. They are widely used in healthcare settings due to their broad-spectrum activity against bacteria, viruses, fungi, and spores. QACs work by disrupting the cell membrane of microorganisms, leading to their death. Common examples include benzalkonium chloride and cetyltrimethylammonium bromide. It is important to note that some microorganisms have developed resistance to QACs, and they may not be effective against all types of pathogens.

Virus internalization, also known as viral entry, is the process by which a virus enters a host cell to infect it and replicate its genetic material. This process typically involves several steps:

1. Attachment: The viral envelope proteins bind to specific receptors on the surface of the host cell.
2. Entry: The virus then enters the host cell through endocytosis or membrane fusion, depending on the type of virus.
3. Uncoating: Once inside the host cell, the viral capsid is removed, releasing the viral genome into the cytoplasm.
4. Replication: The viral genome then uses the host cell's machinery to replicate itself and produce new viral particles.

It's important to note that the specific mechanisms of virus internalization can vary widely between different types of viruses, and are an active area of research in virology and infectious disease.

Cricetinae is a subfamily of rodents that includes hamsters, gerbils, and relatives. These small mammals are characterized by having short limbs, compact bodies, and cheek pouches for storing food. They are native to various parts of the world, particularly in Europe, Asia, and Africa. Some species are popular pets due to their small size, easy care, and friendly nature. In a medical context, understanding the biology and behavior of Cricetinae species can be important for individuals who keep them as pets or for researchers studying their physiology.

In the context of medicine and pharmacology, "kinetics" refers to the study of how a drug moves throughout the body, including its absorption, distribution, metabolism, and excretion (often abbreviated as ADME). This field is called "pharmacokinetics."

1. Absorption: This is the process of a drug moving from its site of administration into the bloodstream. Factors such as the route of administration (e.g., oral, intravenous, etc.), formulation, and individual physiological differences can affect absorption.

2. Distribution: Once a drug is in the bloodstream, it gets distributed throughout the body to various tissues and organs. This process is influenced by factors like blood flow, protein binding, and lipid solubility of the drug.

3. Metabolism: Drugs are often chemically modified in the body, typically in the liver, through processes known as metabolism. These changes can lead to the formation of active or inactive metabolites, which may then be further distributed, excreted, or undergo additional metabolic transformations.

4. Excretion: This is the process by which drugs and their metabolites are eliminated from the body, primarily through the kidneys (urine) and the liver (bile).

Understanding the kinetics of a drug is crucial for determining its optimal dosing regimen, potential interactions with other medications or foods, and any necessary adjustments for special populations like pediatric or geriatric patients, or those with impaired renal or hepatic function.

Membrane microdomains, also known as lipid rafts, are specialized microenvironments within the cell membrane. They are characterized by the presence of sphingolipids, cholesterol, and specific proteins that cluster together, forming dynamic, heterogeneous, and highly organized domains. These microdomains are involved in various cellular processes such as signal transduction, membrane trafficking, and pathogen entry. However, it's important to note that the existence and function of membrane microdomains are still subjects of ongoing research and debate within the scientific community.

Green Fluorescent Protein (GFP) is not a medical term per se, but a scientific term used in the field of molecular biology. GFP is a protein that exhibits bright green fluorescence when exposed to light, particularly blue or ultraviolet light. It was originally discovered in the jellyfish Aequorea victoria.

In medical and biological research, scientists often use recombinant DNA technology to introduce the gene for GFP into other organisms, including bacteria, plants, and animals, including humans. This allows them to track the expression and localization of specific genes or proteins of interest in living cells, tissues, or even whole organisms.

The ability to visualize specific cellular structures or processes in real-time has proven invaluable for a wide range of research areas, from studying the development and function of organs and organ systems to understanding the mechanisms of diseases and the effects of therapeutic interventions.

An asialoglycoprotein receptor (ASGPR) is a type of cell surface receptor found primarily on hepatocytes, which are the main cell type in the liver. These receptors are responsible for recognizing and removing glycoproteins (proteins with attached carbohydrate molecules) from circulation, particularly those that have lost their terminal sialic acid residues through a process called desialylation.

ASGPRs play an essential role in the liver's clearance function by identifying and removing various substances, such as bacteria, viruses, and abnormal or damaged cells, from the bloodstream. There are two main types of ASGPRs, known as ASGPR1 and ASGPR2, which have different structures and functions but work together to mediate the endocytosis and degradation of desialylated glycoproteins.

Understanding the role of ASGPRs in liver function has important implications for developing targeted therapies and diagnostic tools for various liver-related diseases, including hepatitis, cirrhosis, and liver cancer.

Electron microscopy (EM) is a type of microscopy that uses a beam of electrons to create an image of the sample being examined, resulting in much higher magnification and resolution than light microscopy. There are several types of electron microscopy, including transmission electron microscopy (TEM), scanning electron microscopy (SEM), and reflection electron microscopy (REM).

In TEM, a beam of electrons is transmitted through a thin slice of the sample, and the electrons that pass through the sample are focused to form an image. This technique can provide detailed information about the internal structure of cells, viruses, and other biological specimens, as well as the composition and structure of materials at the atomic level.

In SEM, a beam of electrons is scanned across the surface of the sample, and the electrons that are scattered back from the surface are detected to create an image. This technique can provide information about the topography and composition of surfaces, as well as the structure of materials at the microscopic level.

REM is a variation of SEM in which the beam of electrons is reflected off the surface of the sample, rather than scattered back from it. This technique can provide information about the surface chemistry and composition of materials.

Electron microscopy has a wide range of applications in biology, medicine, and materials science, including the study of cellular structure and function, disease diagnosis, and the development of new materials and technologies.

Tertiary protein structure refers to the three-dimensional arrangement of all the elements (polypeptide chains) of a single protein molecule. It is the highest level of structural organization and results from interactions between various side chains (R groups) of the amino acids that make up the protein. These interactions, which include hydrogen bonds, ionic bonds, van der Waals forces, and disulfide bridges, give the protein its unique shape and stability, which in turn determines its function. The tertiary structure of a protein can be stabilized by various factors such as temperature, pH, and the presence of certain ions. Any changes in these factors can lead to denaturation, where the protein loses its tertiary structure and thus its function.

Asialoglycoproteins are glycoproteins that have lost their terminal sialic acid residues. In the body, these molecules are typically recognized and removed from circulation by hepatic lectins, such as the Ashwell-Morrell receptor, found on liver cells. This process is a part of the normal turnover and clearance of glycoproteins in the body.

Rab GTP-binding proteins, also known as Rab GTPases or simply Rabs, are a large family of small GTP-binding proteins that play a crucial role in regulating intracellular vesicle trafficking. They function as molecular switches that cycle between an active GTP-bound state and an inactive GDP-bound state.

In the active state, Rab proteins interact with various effector molecules to mediate specific membrane trafficking events such as vesicle budding, transport, tethering, and fusion. Each Rab protein is thought to have a unique function and localize to specific intracellular compartments or membranes, where they regulate the transport of vesicles and organelles within the cell.

Rab proteins are involved in several important cellular processes, including endocytosis, exocytosis, Golgi apparatus function, autophagy, and intracellular signaling. Dysregulation of Rab GTP-binding proteins has been implicated in various human diseases, such as cancer, neurodegenerative disorders, and infectious diseases.

COS cells are a type of cell line that are commonly used in molecular biology and genetic research. The name "COS" is an acronym for "CV-1 in Origin," as these cells were originally derived from the African green monkey kidney cell line CV-1. COS cells have been modified through genetic engineering to express high levels of a protein called SV40 large T antigen, which allows them to efficiently take up and replicate exogenous DNA.

There are several different types of COS cells that are commonly used in research, including COS-1, COS-3, and COS-7 cells. These cells are widely used for the production of recombinant proteins, as well as for studies of gene expression, protein localization, and signal transduction.

It is important to note that while COS cells have been a valuable tool in scientific research, they are not without their limitations. For example, because they are derived from monkey kidney cells, there may be differences in the way that human genes are expressed or regulated in these cells compared to human cells. Additionally, because COS cells express SV40 large T antigen, they may have altered cell cycle regulation and other phenotypic changes that could affect experimental results. Therefore, it is important to carefully consider the choice of cell line when designing experiments and interpreting results.

CHO cells, or Chinese Hamster Ovary cells, are a type of immortalized cell line that are commonly used in scientific research and biotechnology. They were originally derived from the ovaries of a female Chinese hamster (Cricetulus griseus) in the 1950s.

CHO cells have several characteristics that make them useful for laboratory experiments. They can grow and divide indefinitely under appropriate conditions, which allows researchers to culture large quantities of them for study. Additionally, CHO cells are capable of expressing high levels of recombinant proteins, making them a popular choice for the production of therapeutic drugs, vaccines, and other biologics.

In particular, CHO cells have become a workhorse in the field of biotherapeutics, with many approved monoclonal antibody-based therapies being produced using these cells. The ability to genetically modify CHO cells through various methods has further expanded their utility in research and industrial applications.

It is important to note that while CHO cells are widely used in scientific research, they may not always accurately represent human cell behavior or respond to drugs and other compounds in the same way as human cells do. Therefore, results obtained using CHO cells should be validated in more relevant systems when possible.

Vacuoles are membrane-bound organelles found in the cells of most eukaryotic organisms. They are essentially fluid-filled sacs that store various substances, such as enzymes, waste products, and nutrients. In plants, vacuoles often contain water, ions, and various organic compounds, while in fungi, they may store lipids or pigments. Vacuoles can also play a role in maintaining the turgor pressure of cells, which is critical for cell shape and function.

In animal cells, vacuoles are typically smaller and less numerous than in plant cells. Animal cells have lysosomes, which are membrane-bound organelles that contain digestive enzymes and break down waste materials, cellular debris, and foreign substances. Lysosomes can be considered a type of vacuole, but they are more specialized in their function.

Overall, vacuoles are essential for maintaining the health and functioning of cells by providing a means to store and dispose of various substances.

Auxilins are a type of protein that play a role in the regulation of intracellular trafficking, specifically in the recycling of clathrin-coated vesicles. These proteins help to disassemble the clathrin lattice after the vesicles have delivered their cargo, allowing the clathrin molecules to be reused for subsequent rounds of endocytosis. Auxilins are important for maintaining the efficiency and fidelity of intracellular trafficking in cells.

Biological models, also known as physiological models or organismal models, are simplified representations of biological systems, processes, or mechanisms that are used to understand and explain the underlying principles and relationships. These models can be theoretical (conceptual or mathematical) or physical (such as anatomical models, cell cultures, or animal models). They are widely used in biomedical research to study various phenomena, including disease pathophysiology, drug action, and therapeutic interventions.

Examples of biological models include:

1. Mathematical models: These use mathematical equations and formulas to describe complex biological systems or processes, such as population dynamics, metabolic pathways, or gene regulation networks. They can help predict the behavior of these systems under different conditions and test hypotheses about their underlying mechanisms.
2. Cell cultures: These are collections of cells grown in a controlled environment, typically in a laboratory dish or flask. They can be used to study cellular processes, such as signal transduction, gene expression, or metabolism, and to test the effects of drugs or other treatments on these processes.
3. Animal models: These are living organisms, usually vertebrates like mice, rats, or non-human primates, that are used to study various aspects of human biology and disease. They can provide valuable insights into the pathophysiology of diseases, the mechanisms of drug action, and the safety and efficacy of new therapies.
4. Anatomical models: These are physical representations of biological structures or systems, such as plastic models of organs or tissues, that can be used for educational purposes or to plan surgical procedures. They can also serve as a basis for developing more sophisticated models, such as computer simulations or 3D-printed replicas.

Overall, biological models play a crucial role in advancing our understanding of biology and medicine, helping to identify new targets for therapeutic intervention, develop novel drugs and treatments, and improve human health.

Carrier proteins, also known as transport proteins, are a type of protein that facilitates the movement of molecules across cell membranes. They are responsible for the selective and active transport of ions, sugars, amino acids, and other molecules from one side of the membrane to the other, against their concentration gradient. This process requires energy, usually in the form of ATP (adenosine triphosphate).

Carrier proteins have a specific binding site for the molecule they transport, and undergo conformational changes upon binding, which allows them to move the molecule across the membrane. Once the molecule has been transported, the carrier protein returns to its original conformation, ready to bind and transport another molecule.

Carrier proteins play a crucial role in maintaining the balance of ions and other molecules inside and outside of cells, and are essential for many physiological processes, including nerve impulse transmission, muscle contraction, and nutrient uptake.

Fluorescent dyes are substances that emit light upon excitation by absorbing light of a shorter wavelength. In a medical context, these dyes are often used in various diagnostic tests and procedures to highlight or mark certain structures or substances within the body. For example, fluorescent dyes may be used in imaging techniques such as fluorescence microscopy or fluorescence angiography to help visualize cells, tissues, or blood vessels. These dyes can also be used in flow cytometry to identify and sort specific types of cells. The choice of fluorescent dye depends on the specific application and the desired properties, such as excitation and emission spectra, quantum yield, and photostability.

Amino acid motifs are recurring patterns or sequences of amino acids in a protein molecule. These motifs can be identified through various sequence analysis techniques and often have functional or structural significance. They can be as short as two amino acids in length, but typically contain at least three to five residues.

Some common examples of amino acid motifs include:

1. Active site motifs: These are specific sequences of amino acids that form the active site of an enzyme and participate in catalyzing chemical reactions. For example, the catalytic triad in serine proteases consists of three residues (serine, histidine, and aspartate) that work together to hydrolyze peptide bonds.
2. Signal peptide motifs: These are sequences of amino acids that target proteins for secretion or localization to specific organelles within the cell. For example, a typical signal peptide consists of a positively charged n-region, a hydrophobic h-region, and a polar c-region that directs the protein to the endoplasmic reticulum membrane for translocation.
3. Zinc finger motifs: These are structural domains that contain conserved sequences of amino acids that bind zinc ions and play important roles in DNA recognition and regulation of gene expression.
4. Transmembrane motifs: These are sequences of hydrophobic amino acids that span the lipid bilayer of cell membranes and anchor transmembrane proteins in place.
5. Phosphorylation sites: These are specific serine, threonine, or tyrosine residues that can be phosphorylated by protein kinases to regulate protein function.

Understanding amino acid motifs is important for predicting protein structure and function, as well as for identifying potential drug targets in disease-associated proteins.

Clathrin light chains are a type of protein that make up part of the clathrin coat, which is a lattice-like structure that helps form the outer shell of certain types of cellular structures called vesicles. These vesicles are involved in various cellular processes, such as endocytosis and intracellular trafficking.

Clathrin light chains combine with clathrin heavy chains to form triskelions, which are the building blocks of the clathrin lattice. There are two types of clathrin light chains, known as LCa and LCb, and they differ in their amino acid sequences and functions.

Clathrin light chains play a role in regulating the assembly and disassembly of the clathrin coat, and they have also been implicated in various signaling pathways within the cell. Mutations in clathrin light chain genes have been associated with certain diseases, such as neuromuscular disorders and cancer.

Monomeric Clathrin Assembly Proteins (also known as Clathrin Terminal Domain Proteins or CTD proteins) refer to a group of proteins that play a crucial role in the assembly and disassembly of clathrin-coated vesicles, which are involved in intracellular trafficking processes such as endocytosis and recycling of membrane receptors.

Clathrin is a triskelion-shaped protein made up of three heavy chains and three light chains. The monomeric clathrin assembly proteins, including CTD-associated proteins (CAPs) and serine kinases such as Clathrin Kinase (CLK), interact with the terminal domains of clathrin's heavy chains to regulate the formation and stability of clathrin lattices.

These proteins facilitate the self-assembly of clathrin molecules into polyhedral cages, which then deform the membrane and form vesicles that bud off from the plasma membrane or intracellular organelles. The monomeric clathrin assembly proteins also play a role in regulating the disassembly of these structures during the uncoating process, allowing for the recycling of clathrin molecules and the release of cargo.

In summary, Monomeric Clathrin Assembly Proteins are essential components of the clathrin-mediated trafficking pathway, facilitating the formation, stability, and disassembly of clathrin-coated vesicles.

Cell polarity refers to the asymmetric distribution of membrane components, cytoskeleton, and organelles in a cell. This asymmetry is crucial for various cellular functions such as directed transport, cell division, and signal transduction. The plasma membrane of polarized cells exhibits distinct domains with unique protein and lipid compositions that define apical, basal, and lateral surfaces of the cell.

In epithelial cells, for example, the apical surface faces the lumen or external environment, while the basolateral surface interacts with other cells or the extracellular matrix. The establishment and maintenance of cell polarity are regulated by various factors including protein complexes, lipids, and small GTPases. Loss of cell polarity has been implicated in several diseases, including cancer and neurological disorders.

"Mating factor receptors" are a type of cell surface receptor found in certain species of fungi that play a crucial role in the process of mating and sexual reproduction. These receptors are responsible for recognizing and binding to specific signaling molecules, known as "mating factors," which are released by potential mating partners.

In the fungus Saccharomyces cerevisiae (yeast), for example, there are two types of mating factors: a-factor and α-factor. The a-factor is produced by cells with the mating type "a," while the α-factor is produced by cells with the mating type "α." When these factors come into contact with receptor proteins on the surface of cells with the opposite mating type, they trigger a series of intracellular signaling events that ultimately lead to the fusion of the two cells and the formation of a diploid zygote.

The receptors for mating factors are typically transmembrane proteins with an extracellular domain that binds to the mating factor, and an intracellular domain that activates downstream signaling pathways. In S. cerevisiae, the a-factor receptor is called "Ste3," while the α-factor receptor is called "Ste2."

It's worth noting that while mating factor receptors are essential for sexual reproduction in fungi, they have also been implicated in other important cellular processes, such as cell growth, differentiation, and pathogenesis.

Endosomal Sorting Complexes Required for Transport (ESCRT) are a set of protein complexes found in the endosomal membrane of eukaryotic cells. They play a crucial role in the sorting and trafficking of proteins and lipids between various cellular compartments, particularly in the formation of vesicles and the budding of viruses.

The ESCRT system is composed of several distinct complexes (ESCRT-0, -I, -II, and -III) that work together in a coordinated manner to carry out their functions. ESCRT-0 recognizes and binds to ubiquitinated proteins on the endosomal membrane, initiating the sorting process. ESCRT-I and -II then help to deform the membrane and recruit ESCRT-III, which forms a tight spiral around the neck of the budding vesicle. Finally, the AAA+ ATPase Vps4 disassembles the ESCRT-III complex, allowing for the release of the vesicle into the lumen of the endosome or extracellular space.

Defects in the ESCRT system have been linked to a variety of human diseases, including neurological disorders, cancer, and viral infections.

'Cercopithecus aethiops' is the scientific name for the monkey species more commonly known as the green monkey. It belongs to the family Cercopithecidae and is native to western Africa. The green monkey is omnivorous, with a diet that includes fruits, nuts, seeds, insects, and small vertebrates. They are known for their distinctive greenish-brown fur and long tail. Green monkeys are also important animal models in biomedical research due to their susceptibility to certain diseases, such as SIV (simian immunodeficiency virus), which is closely related to HIV.

Cell compartmentation, also known as intracellular compartmentalization, refers to the organization of cells into distinct functional and spatial domains. This is achieved through the separation of cellular components and biochemical reactions into membrane-bound organelles or compartments. Each compartment has its unique chemical composition and environment, allowing for specific biochemical reactions to occur efficiently and effectively without interfering with other processes in the cell.

Some examples of membrane-bound organelles include the nucleus, mitochondria, chloroplasts, endoplasmic reticulum, Golgi apparatus, lysosomes, peroxisomes, and vacuoles. These organelles have specific functions, such as energy production (mitochondria), protein synthesis and folding (endoplasmic reticulum and Golgi apparatus), waste management (lysosomes), and lipid metabolism (peroxisomes).

Cell compartmentation is essential for maintaining cellular homeostasis, regulating metabolic pathways, protecting the cell from potentially harmful substances, and enabling complex biochemical reactions to occur in a controlled manner. Dysfunction of cell compartmentation can lead to various diseases, including neurodegenerative disorders, cancer, and metabolic disorders.

A ligand, in the context of biochemistry and medicine, is a molecule that binds to a specific site on a protein or a larger biomolecule, such as an enzyme or a receptor. This binding interaction can modify the function or activity of the target protein, either activating it or inhibiting it. Ligands can be small molecules, like hormones or neurotransmitters, or larger structures, like antibodies. The study of ligand-protein interactions is crucial for understanding cellular processes and developing drugs, as many therapeutic compounds function by binding to specific targets within the body.

Caveolins are a group of proteins that are the main structural components of caveolae, which are small invaginations or "caves" found in the plasma membrane of many cell types. These proteins play important roles in various cellular processes such as endocytosis, cholesterol homeostasis, and signal transduction.

There are three main caveolin isoforms: caveolin-1, caveolin-2, and caveolin-3. Caveolin-1 is the most well-studied and is expressed in many cell types, while caveolin-2 and caveolin-3 have more restricted expression patterns. Caveolin-1 and caveolin-2 are co-expressed in many cells and can form hetero-oligomers, while caveolin-3 primarily forms homo-oligomers.

Caveolins have a number of functional domains that allow them to interact with various proteins and lipids. For example, the C-terminal domain of caveolin-1 contains a binding site for cholesterol, which helps to regulate the formation and stability of caveolae. Additionally, the N-terminal domain of caveolin-1 contains a binding site for various signaling proteins, allowing it to act as a scaffolding protein that organizes signaling complexes within caveolae.

Mutations in caveolin genes have been associated with several human diseases, including muscular dystrophy, cardiovascular disease, and cancer.

Dynamin III is a protein that belongs to the dynamin family, which are large GTPases involved in various cellular processes such as membrane trafficking and cytokinesis. Dynamin III is primarily expressed in the testis and has been suggested to play a role in spermatogenesis. It is also known as DNM3 or dyn3.

The dynamin family of proteins consists of three main members: dynamin I, II, and III. These proteins share structural and functional similarities but have distinct tissue distributions and functions. Dynamin I and II are widely expressed in various tissues and play important roles in endocytosis and intracellular vesicle trafficking. In contrast, dynamin III is primarily found in the testis and has been implicated in sperm development and function.

Dynamin III is a large protein that consists of several functional domains, including an N-terminal GTPase domain, a middle domain, a pleckstrin homology (PH) domain, a GTPase effector domain (GED), and a C-terminal proline-rich domain. These domains enable dynamin III to interact with various cellular components and participate in diverse cellular processes.

While the precise function of dynamin III remains to be fully elucidated, studies have suggested that it may play a role in sperm maturation, motility, and fertilization. Dynamin III has been shown to localize to the acrosomal region of spermatozoa, which is involved in sperm-egg recognition and fusion during fertilization. Additionally, dynamin III knockout mice exhibit impaired spermatogenesis and reduced fertility, further supporting its role in male reproduction.

Overall, dynamin III is a testis-specific protein that belongs to the dynamin family of GTPases and has been implicated in various aspects of sperm development and function. However, more research is needed to fully understand its molecular mechanisms and physiological significance.

Biotinyllation is a process of introducing biotin (a vitamin) into a molecule, such as a protein or nucleic acid (DNA or RNA), through chemical reaction. This modification allows the labeled molecule to be easily detected and isolated using streptavidin-biotin interaction, which has one of the strongest non-covalent bonds in nature. Biotinylated molecules are widely used in various research applications such as protein-protein interaction studies, immunohistochemistry, and blotting techniques.

Cadaverine is a foul-smelling organic compound that is produced by the breakdown of certain amino acids in dead bodies. It is formed through the decarboxylation of lysine, an essential amino acid, and is characterized by its strong, unpleasant odor. Cadaverine is often used as a forensic indicator of decomposition and is also being studied for its potential role in various physiological processes, such as inflammation and cancer.

Adaptor Protein Complex (AP) beta subunits are structural proteins that play a crucial role in intracellular vesicle trafficking. They are part of the heterotetrameric AP complex, which is responsible for recognizing and binding to specific sorting signals on membrane cargo proteins, allowing for their packaging into transport vesicles.

There are four different types of AP complexes (AP-1, AP-2, AP-3, and AP-4), each with a unique set of subunits that confer specific functions. The beta subunit is a common component of all four complexes and is essential for their stability and function.

The beta subunit interacts with other subunits within the AP complex as well as with accessory proteins, such as clathrin, to form a coat around the transport vesicle. This coat helps to shape the vesicle and facilitate its movement between different cellular compartments.

Mutations in genes encoding AP beta subunits have been linked to various human diseases, including forms of hemolytic anemia, neurological disorders, and immunodeficiency.

Nerve tissue proteins are specialized proteins found in the nervous system that provide structural and functional support to nerve cells, also known as neurons. These proteins include:

1. Neurofilaments: These are type IV intermediate filaments that provide structural support to neurons and help maintain their shape and size. They are composed of three subunits - NFL (light), NFM (medium), and NFH (heavy).

2. Neuronal Cytoskeletal Proteins: These include tubulins, actins, and spectrins that provide structural support to the neuronal cytoskeleton and help maintain its integrity.

3. Neurotransmitter Receptors: These are specialized proteins located on the postsynaptic membrane of neurons that bind neurotransmitters released by presynaptic neurons, triggering a response in the target cell.

4. Ion Channels: These are transmembrane proteins that regulate the flow of ions across the neuronal membrane and play a crucial role in generating and transmitting electrical signals in neurons.

5. Signaling Proteins: These include enzymes, receptors, and adaptor proteins that mediate intracellular signaling pathways involved in neuronal development, differentiation, survival, and death.

6. Adhesion Proteins: These are cell surface proteins that mediate cell-cell and cell-matrix interactions, playing a crucial role in the formation and maintenance of neural circuits.

7. Extracellular Matrix Proteins: These include proteoglycans, laminins, and collagens that provide structural support to nerve tissue and regulate neuronal migration, differentiation, and survival.

The cytoskeleton is a complex network of various protein filaments that provides structural support, shape, and stability to the cell. It plays a crucial role in maintaining cellular integrity, intracellular organization, and enabling cell movement. The cytoskeleton is composed of three major types of protein fibers: microfilaments (actin filaments), intermediate filaments, and microtubules. These filaments work together to provide mechanical support, participate in cell division, intracellular transport, and help maintain the cell's architecture. The dynamic nature of the cytoskeleton allows cells to adapt to changing environmental conditions and respond to various stimuli.

Thiazolidinediones (TZDs), also known as glitazones, are a class of drugs used in the management of type 2 diabetes. They function as insulin sensitizers, improving the body's response to insulin, particularly in muscle, fat, and liver tissues. This helps to lower blood sugar levels.

Examples of TZDs include pioglitazone (Actos) and rosiglitazone (Avandia). While effective at controlling blood sugar, these medications have been associated with serious side effects such as an increased risk of heart failure, fractures, and bladder cancer. Therefore, their use is typically reserved for patients who cannot achieve good glucose control with other medications and who do not have a history of heart failure or bladder cancer.

It's important to note that the medical community continues to evaluate and re-evaluate the risks and benefits of thiazolidinediones, and their use may change based on new research findings. As always, patients should consult with their healthcare providers for personalized medical advice regarding their diabetes treatment plan.

RAB4 GTP-binding proteins are a subfamily of RAB proteins, which are small guanosine triphosphatases (GTPases) that play crucial roles in regulating intracellular vesicle trafficking. Specifically, RAB4 GTP-binding proteins are involved in the early stages of endocytic recycling, a process by which internalized membrane receptors and cargo are transported back to the plasma membrane for reuse.

RAB4 proteins exist in two distinct conformational states: an active, GTP-bound state and an inactive, GDP-bound state. In the active state, RAB4 proteins interact with various effector molecules to facilitate vesicle transport and fusion events. Upon hydrolysis of GTP to GDP, RAB4 proteins switch to their inactive state, which leads to dissociation from effector molecules and subsequent recycling of the RAB4 protein back to the donor membrane compartment.

There are two isoforms of RAB4 proteins, RAB4A and RAB4B, which share a high degree of sequence similarity but have distinct cellular localization patterns and functions. Dysregulation of RAB4 GTP-binding proteins has been implicated in various human diseases, including cancer and neurodegenerative disorders.

I'm sorry for any confusion, but "opossums" are not a medical term or a medical condition. Opossums are actually marsupials (pouched mammals) that are native to the Americas. They are often known for their "playing dead" behavior as a defense mechanism when threatened. If you have any questions about medical terminology or health-related topics, I'd be happy to help with those!

Electric capacitance is a measure of the amount of electrical charge that a body or system can hold for a given electric potential. In other words, it is a measure of the capacity of a body or system to store an electric charge. The unit of electric capacitance is the farad (F), which is defined as the capacitance of a conductor that, when charged with one coulomb of electricity, has a potential difference of one volt between its surfaces.

In medical terms, electric capacitance may be relevant in the context of electrical stimulation therapies, such as transcutaneous electrical nerve stimulation (TENS) or functional electrical stimulation (FES). In these therapies, electrodes are placed on the skin and a controlled electric current is applied to stimulate nerves or muscles. The electric capacitance of the tissue and electrodes can affect the distribution and intensity of the electric field, which in turn can influence the therapeutic effect.

It is important to note that while electric capacitance is a fundamental concept in physics and engineering, it is not a commonly used term in medical practice or research. Instead, terms such as impedance or resistance are more commonly used to describe the electrical properties of biological tissues.

Phosphorylation is the process of adding a phosphate group (a molecule consisting of one phosphorus atom and four oxygen atoms) to a protein or other organic molecule, which is usually done by enzymes called kinases. This post-translational modification can change the function, localization, or activity of the target molecule, playing a crucial role in various cellular processes such as signal transduction, metabolism, and regulation of gene expression. Phosphorylation is reversible, and the removal of the phosphate group is facilitated by enzymes called phosphatases.

Sorting nexins are a group of proteins that are involved in the intracellular trafficking and sorting of membrane-bound organelles and vesicles. They were first identified by their ability to bind to small GTPases of the Rab family, which are important regulators of vesicle transport. Sorting nexins contain a phox (PX) domain that binds to phosphatidylinositol 3-phosphate (PI3P), a lipid found on early endosomes, and a Bin/Amphyphysin/Rvs (BAR) domain that can sense and shape membranes.

Sorting nexins have been implicated in various cellular processes, including the sorting of receptors and ligands in the endocytic pathway, the regulation of autophagy, and the maintenance of Golgi apparatus structure and function. Mutations in sorting nexin genes have been associated with several human diseases, such as Parkinson's disease, hereditary spastic paraplegia, and cancer.

In summary, sorting nexins are a family of proteins that play crucial roles in intracellular membrane trafficking and sorting by interacting with Rab GTPases, phosphoinositides, and membranes through their PX and BAR domains.

Ammonium chloride is an inorganic compound with the formula NH4Cl. It is a white crystalline salt that is highly soluble in water and can be produced by combining ammonia (NH3) with hydrochloric acid (HCl). Ammonium chloride is commonly used as a source of hydrogen ions in chemical reactions, and it has a variety of industrial and medical applications.

In the medical field, ammonium chloride is sometimes used as a expectorant to help thin and loosen mucus in the respiratory tract, making it easier to cough up and clear from the lungs. It may also be used to treat conditions such as metabolic alkalosis, a condition characterized by an excess of base in the body that can lead to symptoms such as confusion, muscle twitching, and irregular heartbeat.

However, it is important to note that ammonium chloride can have side effects, including stomach upset, nausea, vomiting, and diarrhea. It should be used under the guidance of a healthcare professional and should not be taken in large amounts or for extended periods of time without medical supervision.

Adaptor proteins are a type of protein that play a crucial role in intracellular signaling pathways by serving as a link between different components of the signaling complex. Specifically, "signal transducing adaptor proteins" refer to those adaptor proteins that are involved in signal transduction processes, where they help to transmit signals from the cell surface receptors to various intracellular effectors. These proteins typically contain modular domains that allow them to interact with multiple partners, thereby facilitating the formation of large signaling complexes and enabling the integration of signals from different pathways.

Signal transducing adaptor proteins can be classified into several families based on their structural features, including the Src homology 2 (SH2) domain, the Src homology 3 (SH3) domain, and the phosphotyrosine-binding (PTB) domain. These domains enable the adaptor proteins to recognize and bind to specific motifs on other signaling molecules, such as receptor tyrosine kinases, G protein-coupled receptors, and cytokine receptors.

One well-known example of a signal transducing adaptor protein is the growth factor receptor-bound protein 2 (Grb2), which contains an SH2 domain that binds to phosphotyrosine residues on activated receptor tyrosine kinases. Grb2 also contains an SH3 domain that interacts with proline-rich motifs on other signaling proteins, such as the guanine nucleotide exchange factor SOS. This interaction facilitates the activation of the Ras small GTPase and downstream signaling pathways involved in cell growth, differentiation, and survival.

Overall, signal transducing adaptor proteins play a critical role in regulating various cellular processes by modulating intracellular signaling pathways in response to extracellular stimuli. Dysregulation of these proteins has been implicated in various diseases, including cancer and inflammatory disorders.

Monensin is a type of antibiotic known as a polyether ionophore, which is used primarily in the veterinary field for the prevention and treatment of coccidiosis, a parasitic disease caused by protozoa in animals. It works by selectively increasing the permeability of cell membranes to sodium ions, leading to disruption of the ion balance within the cells of the parasite and ultimately causing its death.

In addition to its use as an animal antibiotic, monensin has also been studied for its potential effects on human health, including its ability to lower cholesterol levels and improve insulin sensitivity in type 2 diabetes. However, it is not currently approved for use in humans due to concerns about toxicity and potential side effects.

HEK293 cells, also known as human embryonic kidney 293 cells, are a line of cells used in scientific research. They were originally derived from human embryonic kidney cells and have been adapted to grow in a lab setting. HEK293 cells are widely used in molecular biology and biochemistry because they can be easily transfected (a process by which DNA is introduced into cells) and highly express foreign genes. As a result, they are often used to produce proteins for structural and functional studies. It's important to note that while HEK293 cells are derived from human tissue, they have been grown in the lab for many generations and do not retain the characteristics of the original embryonic kidney cells.

The Golgi apparatus, also known as the Golgi complex or simply the Golgi, is a membrane-bound organelle found in the cytoplasm of most eukaryotic cells. It plays a crucial role in the processing, sorting, and packaging of proteins and lipids for transport to their final destinations within the cell or for secretion outside the cell.

The Golgi apparatus consists of a series of flattened, disc-shaped sacs called cisternae, which are stacked together in a parallel arrangement. These stacks are often interconnected by tubular structures called tubules or vesicles. The Golgi apparatus has two main faces: the cis face, which is closest to the endoplasmic reticulum (ER) and receives proteins and lipids directly from the ER; and the trans face, which is responsible for sorting and dispatching these molecules to their final destinations.

The Golgi apparatus performs several essential functions in the cell:

1. Protein processing: After proteins are synthesized in the ER, they are transported to the cis face of the Golgi apparatus, where they undergo various post-translational modifications, such as glycosylation (the addition of sugar molecules) and sulfation. These modifications help determine the protein's final structure, function, and targeting.
2. Lipid modification: The Golgi apparatus also modifies lipids by adding or removing different functional groups, which can influence their properties and localization within the cell.
3. Protein sorting and packaging: Once proteins and lipids have been processed, they are sorted and packaged into vesicles at the trans face of the Golgi apparatus. These vesicles then transport their cargo to various destinations, such as lysosomes, plasma membrane, or extracellular space.
4. Intracellular transport: The Golgi apparatus serves as a central hub for intracellular trafficking, coordinating the movement of vesicles and other transport carriers between different organelles and cellular compartments.
5. Cell-cell communication: Some proteins that are processed and packaged in the Golgi apparatus are destined for secretion, playing crucial roles in cell-cell communication and maintaining tissue homeostasis.

In summary, the Golgi apparatus is a vital organelle involved in various cellular processes, including post-translational modification, sorting, packaging, and intracellular transport of proteins and lipids. Its proper functioning is essential for maintaining cellular homeostasis and overall organismal health.

The Actin-Related Protein 2-3 (Arp2/3) complex is a group of seven proteins that play a crucial role in the regulation of actin dynamics within cells. The complex is composed of two actin-related proteins, Arp2 and Arp3, as well as five other subunits (ARPC1-5).

The primary function of the Arp2/3 complex is to initiate the formation of new actin filaments by nucleating and branching off from existing ones. This process helps in various cellular processes such as cell motility, cytokinesis, and vesicle trafficking. The activation of the Arp2/3 complex is tightly regulated by various proteins, including nucleation-promoting factors (NPFs), which bind to and stimulate the complex to induce actin polymerization.

Dysregulation of the Arp2/3 complex has been implicated in several human diseases, such as cancer and neurological disorders, highlighting its importance in maintaining proper cellular functions.

Cytoplasm is the material within a eukaryotic cell (a cell with a true nucleus) that lies between the nuclear membrane and the cell membrane. It is composed of an aqueous solution called cytosol, in which various organelles such as mitochondria, ribosomes, endoplasmic reticulum, Golgi apparatus, lysosomes, and vacuoles are suspended. Cytoplasm also contains a variety of dissolved nutrients, metabolites, ions, and enzymes that are involved in various cellular processes such as metabolism, signaling, and transport. It is where most of the cell's metabolic activities take place, and it plays a crucial role in maintaining the structure and function of the cell.

ADP-ribosylation factors (ARFs) are a family of small GTP-binding proteins that play a crucial role in intracellular membrane traffic, actin dynamics, and signal transduction. They function as molecular switches, cycling between an active GTP-bound state and an inactive GDP-bound state.

ARFs are involved in the regulation of vesicle formation, budding, and transport, primarily through their ability to activate phospholipase D and recruit coat proteins to membranes. There are six isoforms of ARFs (ARF1-6) that share a high degree of sequence similarity but have distinct cellular functions and subcellular localizations.

ADP-ribosylation factors get their name from the fact that they were originally identified as proteins that become ADP-ribosylated by cholera toxin, an enzyme produced by Vibrio cholerae bacteria. However, this post-translational modification is not required for their cellular functions.

Defects in ARF function have been implicated in various human diseases, including cancer, neurodegenerative disorders, and infectious diseases. Therefore, understanding the regulation and function of ARFs is an important area of research in biology and medicine.

Saccharomyces cerevisiae proteins are the proteins that are produced by the budding yeast, Saccharomyces cerevisiae. This organism is a single-celled eukaryote that has been widely used as a model organism in scientific research for many years due to its relatively simple genetic makeup and its similarity to higher eukaryotic cells.

The genome of Saccharomyces cerevisiae has been fully sequenced, and it is estimated to contain approximately 6,000 genes that encode proteins. These proteins play a wide variety of roles in the cell, including catalyzing metabolic reactions, regulating gene expression, maintaining the structure of the cell, and responding to environmental stimuli.

Many Saccharomyces cerevisiae proteins have human homologs and are involved in similar biological processes, making this organism a valuable tool for studying human disease. For example, many of the proteins involved in DNA replication, repair, and recombination in yeast have human counterparts that are associated with cancer and other diseases. By studying these proteins in yeast, researchers can gain insights into their function and regulation in humans, which may lead to new treatments for disease.

Microfilament proteins are a type of structural protein that form part of the cytoskeleton in eukaryotic cells. They are made up of actin monomers, which polymerize to form long, thin filaments. These filaments are involved in various cellular processes such as muscle contraction, cell division, and cell motility. Microfilament proteins also interact with other cytoskeletal components like intermediate filaments and microtubules to maintain the overall shape and integrity of the cell. Additionally, they play a crucial role in the formation of cell-cell junctions and cell-matrix adhesions, which are essential for tissue structure and function.

Chloroquine is an antimalarial and autoimmune disease drug. It works by increasing the pH or making the environment less acidic in the digestive vacuoles of malaria parasites, which inhibits the polymerization of heme and the formation of hemozoin. This results in the accumulation of toxic levels of heme that are harmful to the parasite. Chloroquine is also used as an anti-inflammatory agent in the treatment of rheumatoid arthritis, discoid or systemic lupus erythematosus, and photodermatitis.

The chemical name for chloroquine is 7-chloro-4-(4-diethylamino-1-methylbutylamino)quinoline, and it has a molecular formula of C18H26ClN3. It is available in the form of phosphate or sulfate salts for oral administration as tablets or solution.

Chloroquine was first synthesized in 1934 by Bayer scientists, and it has been widely used since the 1940s as a safe and effective antimalarial drug. However, the emergence of chloroquine-resistant strains of malaria parasites has limited its use in some areas. Chloroquine is also being investigated for its potential therapeutic effects on various viral infections, including COVID-19.

Ubiquitination is a post-translational modification process in which a ubiquitin protein is covalently attached to a target protein. This process plays a crucial role in regulating various cellular functions, including protein degradation, DNA repair, and signal transduction. The addition of ubiquitin can lead to different outcomes depending on the number and location of ubiquitin molecules attached to the target protein. Monoubiquitination (the attachment of a single ubiquitin molecule) or multiubiquitination (the attachment of multiple ubiquitin molecules) can mark proteins for degradation by the 26S proteasome, while specific types of ubiquitination (e.g., K63-linked polyubiquitination) can serve as a signal for nonproteolytic functions such as endocytosis, autophagy, or DNA repair. Ubiquitination is a highly regulated process that involves the coordinated action of three enzymes: E1 ubiquitin-activating enzyme, E2 ubiquitin-conjugating enzyme, and E3 ubiquitin ligase. Dysregulation of ubiquitination has been implicated in various diseases, including cancer, neurodegenerative disorders, and inflammatory conditions.

In the field of medicine, "time factors" refer to the duration of symptoms or time elapsed since the onset of a medical condition, which can have significant implications for diagnosis and treatment. Understanding time factors is crucial in determining the progression of a disease, evaluating the effectiveness of treatments, and making critical decisions regarding patient care.

For example, in stroke management, "time is brain," meaning that rapid intervention within a specific time frame (usually within 4.5 hours) is essential to administering tissue plasminogen activator (tPA), a clot-busting drug that can minimize brain damage and improve patient outcomes. Similarly, in trauma care, the "golden hour" concept emphasizes the importance of providing definitive care within the first 60 minutes after injury to increase survival rates and reduce morbidity.

Time factors also play a role in monitoring the progression of chronic conditions like diabetes or heart disease, where regular follow-ups and assessments help determine appropriate treatment adjustments and prevent complications. In infectious diseases, time factors are crucial for initiating antibiotic therapy and identifying potential outbreaks to control their spread.

Overall, "time factors" encompass the significance of recognizing and acting promptly in various medical scenarios to optimize patient outcomes and provide effective care.

Fluorescein-5-isothiocyanate (FITC) is not a medical term per se, but a chemical compound commonly used in biomedical research and clinical diagnostics. Therefore, I will provide a general definition of this term:

Fluorescein-5-isothiocyanate (FITC) is a fluorescent dye with an absorption maximum at approximately 492-495 nm and an emission maximum at around 518-525 nm. It is widely used as a labeling reagent for various biological molecules, such as antibodies, proteins, and nucleic acids, to study their structure, function, and interactions in techniques like flow cytometry, immunofluorescence microscopy, and western blotting. The isothiocyanate group (-N=C=S) in the FITC molecule reacts with primary amines (-NH2) present in biological molecules to form a stable thiourea bond, enabling specific labeling of target molecules for detection and analysis.

Luminescent proteins are a type of protein that emit light through a chemical reaction, rather than by absorbing and re-emitting light like fluorescent proteins. This process is called bioluminescence. The light emitted by luminescent proteins is often used in scientific research as a way to visualize and track biological processes within cells and organisms.

One of the most well-known luminescent proteins is Green Fluorescent Protein (GFP), which was originally isolated from jellyfish. However, GFP is actually a fluorescent protein, not a luminescent one. A true example of a luminescent protein is the enzyme luciferase, which is found in fireflies and other bioluminescent organisms. When luciferase reacts with its substrate, luciferin, it produces light through a process called oxidation.

Luminescent proteins have many applications in research, including as reporters for gene expression, as markers for protein-protein interactions, and as tools for studying the dynamics of cellular processes. They are also used in medical imaging and diagnostics, as well as in the development of new therapies.

Presynaptic terminals, also known as presynaptic boutons or nerve terminals, refer to the specialized structures located at the end of axons in neurons. These terminals contain numerous small vesicles filled with neurotransmitters, which are chemical messengers that transmit signals between neurons.

When an action potential reaches the presynaptic terminal, it triggers the influx of calcium ions into the terminal, leading to the fusion of the vesicles with the presynaptic membrane and the release of neurotransmitters into the synaptic cleft, a small gap between the presynaptic and postsynaptic terminals.

The released neurotransmitters then bind to receptors on the postsynaptic terminal, leading to the generation of an electrical or chemical signal that can either excite or inhibit the postsynaptic neuron. Presynaptic terminals play a crucial role in regulating synaptic transmission and are targets for various drugs and toxins that modulate neuronal communication.

Membrane fusion is a fundamental biological process that involves the merging of two initially separate lipid bilayers, such as those surrounding cells or organelles, to form a single continuous membrane. This process plays a crucial role in various physiological events including neurotransmitter release, hormone secretion, fertilization, viral infection, and intracellular trafficking of proteins and lipids. Membrane fusion is tightly regulated and requires the participation of specific proteins called SNAREs (Soluble NSF Attachment Protein REceptors) and other accessory factors that facilitate the recognition, approximation, and merger of the membranes. The energy required to overcome the repulsive forces between the negatively charged lipid headgroups is provided by these proteins, which undergo conformational changes during the fusion process. Membrane fusion is a highly specific and coordinated event, ensuring that the correct membranes fuse at the right time and place within the cell.

Sodium azide is a chemical compound with the formula NaN3. Medically, it is not used as a treatment, but it can be found in some pharmaceutical and laboratory settings. It is a white crystalline powder that is highly soluble in water and has a relatively low melting point.

Sodium azide is well known for its ability to release nitrogen gas upon decomposition, which makes it useful as a propellant in airbags and as a preservative in laboratory settings to prevent bacterial growth. However, this property also makes it highly toxic to both animals and humans if ingested or inhaled, as it can cause rapid respiratory failure due to the release of nitrogen gas in the body. Therefore, it should be handled with great care and appropriate safety measures.

Small interfering RNA (siRNA) is a type of short, double-stranded RNA molecule that plays a role in the RNA interference (RNAi) pathway. The RNAi pathway is a natural cellular process that regulates gene expression by targeting and destroying specific messenger RNA (mRNA) molecules, thereby preventing the translation of those mRNAs into proteins.

SiRNAs are typically 20-25 base pairs in length and are generated from longer double-stranded RNA precursors called hairpin RNAs or dsRNAs by an enzyme called Dicer. Once generated, siRNAs associate with a protein complex called the RNA-induced silencing complex (RISC), which uses one strand of the siRNA (the guide strand) to recognize and bind to complementary sequences in the target mRNA. The RISC then cleaves the target mRNA, leading to its degradation and the inhibition of protein synthesis.

SiRNAs have emerged as a powerful tool for studying gene function and have shown promise as therapeutic agents for a variety of diseases, including viral infections, cancer, and genetic disorders. However, their use as therapeutics is still in the early stages of development, and there are challenges associated with delivering siRNAs to specific cells and tissues in the body.

Ricin is defined as a highly toxic protein that is derived from the seeds of the castor oil plant (Ricinus communis). It can be produced as a white, powdery substance or a mistable aerosol. Ricin works by getting inside cells and preventing them from making the proteins they need. Without protein, cells die. Eventually, this can cause organ failure and death.

It is not easily inhaled or absorbed through the skin, but if ingested or injected, it can be lethal in very small amounts. There is no antidote for ricin poisoning - treatment consists of supportive care. Ricin has been used as a bioterrorism agent in the past and continues to be a concern due to its relative ease of production and potential high toxicity.

Low-Density Lipoprotein Receptor-Related Protein 1 (LRP1) is a large transmembrane receptor protein that belongs to the low-density lipoprotein receptor family. It plays a crucial role in various biological processes, including cellular signaling, endocytosis, and intracellular trafficking of ligands. LRP1 is widely expressed in many tissues, particularly in the brain, liver, and vascular endothelial cells.

LRP1 interacts with a diverse array of ligands, such as extracellular matrix proteins, apolipoproteins, proteinases, proteinase inhibitors, and various pathogen-associated molecules. The receptor is involved in the clearance of these ligands from the extracellular space through endocytosis, followed by intracellular degradation or recycling.

In the context of lipid metabolism, LRP1 has been implicated in the cellular uptake and degradation of Apolipoprotein E (ApoE)-containing lipoproteins, which are involved in the reverse transport of cholesterol from peripheral tissues to the liver. Dysregulation of LRP1 function has been linked to several diseases, including atherosclerosis, Alzheimer's disease, and various neurological disorders.

In summary, Low-Density Lipoprotein Receptor-Related Protein 1 (LRP1) is a multifunctional transmembrane receptor that plays essential roles in cellular signaling, endocytosis, and intracellular trafficking of various ligands. Its dysfunction has been implicated in several diseases related to lipid metabolism, neurodegeneration, and neurological disorders.

Beta-cyclodextrins are cyclic, oligosaccharide structures made up of 6-8 glucose units linked by α-1,4 glycosidic bonds. They have a hydrophilic outer surface and a hydrophobic central cavity, making them useful for forming inclusion complexes with various hydrophobic molecules in aqueous solutions. This property is exploited in pharmaceutical applications to improve drug solubility, stability, and bioavailability. Additionally, beta-cyclodextrins can be chemically modified to enhance their properties and expand their uses.

Ubiquitin is a small protein that is present in all eukaryotic cells and plays a crucial role in the regulation of various cellular processes, such as protein degradation, DNA repair, and stress response. It is involved in marking proteins for destruction by attaching to them, a process known as ubiquitination. This modification can target proteins for degradation by the proteasome, a large protein complex that breaks down unneeded or damaged proteins in the cell. Ubiquitin also has other functions, such as regulating the localization and activity of certain proteins. The ability of ubiquitin to modify many different proteins and play a role in multiple cellular processes makes it an essential player in maintaining cellular homeostasis.

Hydrogen-ion concentration, also known as pH, is a measure of the acidity or basicity of a solution. It is defined as the negative logarithm (to the base 10) of the hydrogen ion activity in a solution. The standard unit of measurement is the pH unit. A pH of 7 is neutral, less than 7 is acidic, and greater than 7 is basic.

In medical terms, hydrogen-ion concentration is important for maintaining homeostasis within the body. For example, in the stomach, a high hydrogen-ion concentration (low pH) is necessary for the digestion of food. However, in other parts of the body such as blood, a high hydrogen-ion concentration can be harmful and lead to acidosis. Conversely, a low hydrogen-ion concentration (high pH) in the blood can lead to alkalosis. Both acidosis and alkalosis can have serious consequences on various organ systems if not corrected.

"Saccharomyces cerevisiae" is not typically considered a medical term, but it is a scientific name used in the field of microbiology. It refers to a species of yeast that is commonly used in various industrial processes, such as baking and brewing. It's also widely used in scientific research due to its genetic tractability and eukaryotic cellular organization.

However, it does have some relevance to medical fields like medicine and nutrition. For example, certain strains of S. cerevisiae are used as probiotics, which can provide health benefits when consumed. They may help support gut health, enhance the immune system, and even assist in the digestion of certain nutrients.

In summary, "Saccharomyces cerevisiae" is a species of yeast with various industrial and potential medical applications.

Immunoelectron microscopy (IEM) is a specialized type of electron microscopy that combines the principles of immunochemistry and electron microscopy to detect and localize specific antigens within cells or tissues at the ultrastructural level. This technique allows for the visualization and identification of specific proteins, viruses, or other antigenic structures with a high degree of resolution and specificity.

In IEM, samples are first fixed, embedded, and sectioned to prepare them for electron microscopy. The sections are then treated with specific antibodies that have been labeled with electron-dense markers, such as gold particles or ferritin. These labeled antibodies bind to the target antigens in the sample, allowing for their visualization under an electron microscope.

There are several different methods of IEM, including pre-embedding and post-embedding techniques. Pre-embedding involves labeling the antigens before embedding the sample in resin, while post-embedding involves labeling the antigens after embedding. Post-embedding techniques are generally more commonly used because they allow for better preservation of ultrastructure and higher resolution.

IEM is a valuable tool in many areas of research, including virology, bacteriology, immunology, and cell biology. It can be used to study the structure and function of viruses, bacteria, and other microorganisms, as well as the distribution and localization of specific proteins and antigens within cells and tissues.

Down-regulation is a process that occurs in response to various stimuli, where the number or sensitivity of cell surface receptors or the expression of specific genes is decreased. This process helps maintain homeostasis within cells and tissues by reducing the ability of cells to respond to certain signals or molecules.

In the context of cell surface receptors, down-regulation can occur through several mechanisms:

1. Receptor internalization: After binding to their ligands, receptors can be internalized into the cell through endocytosis. Once inside the cell, these receptors may be degraded or recycled back to the cell surface in smaller numbers.
2. Reduced receptor synthesis: Down-regulation can also occur at the transcriptional level, where the expression of genes encoding for specific receptors is decreased, leading to fewer receptors being produced.
3. Receptor desensitization: Prolonged exposure to a ligand can lead to a decrease in receptor sensitivity or affinity, making it more difficult for the cell to respond to the signal.

In the context of gene expression, down-regulation refers to the decreased transcription and/or stability of specific mRNAs, leading to reduced protein levels. This process can be induced by various factors, including microRNA (miRNA)-mediated regulation, histone modification, or DNA methylation.

Down-regulation is an essential mechanism in many physiological processes and can also contribute to the development of several diseases, such as cancer and neurodegenerative disorders.

Proto-oncogene proteins c-cbl are a group of E3 ubiquitin ligases that play crucial roles in regulating various cellular processes, including cell survival, proliferation, differentiation, and migration. The c-cbl gene encodes for the c-Cbl protein, which is a member of the Cbl family of proteins that also includes Cbl-b and Cbl-c.

The c-Cbl protein contains several functional domains, including an N-terminal tyrosine kinase binding domain, a RING finger domain, a proline-rich region, and a C-terminal ubiquitin association domain. These domains enable c-Cbl to interact with various signaling molecules, such as receptor tyrosine kinases (RTKs), G protein-coupled receptors (GPCRs), and growth factor receptors, and regulate their activity through ubiquitination.

Ubiquitination is a post-translational modification that involves the addition of ubiquitin molecules to proteins, leading to their degradation or altered function. c-Cbl functions as an E3 ubiquitin ligase, which catalyzes the transfer of ubiquitin from an E2 ubiquitin-conjugating enzyme to a specific target protein.

Proto-oncogene proteins c-cbl can act as tumor suppressors by negatively regulating signaling pathways that promote cell growth and survival. Mutations in the c-cbl gene or dysregulation of c-Cbl function have been implicated in various types of cancer, including leukemia, lymphoma, and solid tumors. These mutations can lead to increased RTK signaling, enhanced cell proliferation, and decreased apoptosis, contributing to tumor development and progression.

Neurons, also known as nerve cells or neurocytes, are specialized cells that constitute the basic unit of the nervous system. They are responsible for receiving, processing, and transmitting information and signals within the body. Neurons have three main parts: the dendrites, the cell body (soma), and the axon. The dendrites receive signals from other neurons or sensory receptors, while the axon transmits these signals to other neurons, muscles, or glands. The junction between two neurons is called a synapse, where neurotransmitters are released to transmit the signal across the gap (synaptic cleft) to the next neuron. Neurons vary in size, shape, and structure depending on their function and location within the nervous system.

LDL receptors (Low-Density Lipoprotein Receptors) are cell surface receptors that play a crucial role in the regulation of cholesterol homeostasis within the body. They are responsible for recognizing and binding to LDL particles, also known as "bad cholesterol," which are then internalized by the cell through endocytosis.

Once inside the cell, the LDL particles are broken down, releasing their cholesterol content, which can be used for various cellular processes such as membrane synthesis and hormone production. The LDL receptors themselves are recycled back to the cell surface, allowing for continued uptake of LDL particles.

Mutations in the LDL receptor gene can lead to a condition called familial hypercholesterolemia, which is characterized by high levels of LDL cholesterol in the blood and an increased risk of premature cardiovascular disease.

Organelles are specialized structures within cells that perform specific functions essential for the cell's survival and proper functioning. They can be thought of as the "organs" of the cell, and they are typically membrane-bound to separate them from the rest of the cellular cytoplasm. Examples of organelles include the nucleus (which contains the genetic material), mitochondria (which generate energy for the cell), ribosomes (which synthesize proteins), endoplasmic reticulum (which is involved in protein and lipid synthesis), Golgi apparatus (which modifies, sorts, and packages proteins and lipids for transport), lysosomes (which break down waste materials and cellular debris), peroxisomes (which detoxify harmful substances and produce certain organic compounds), and vacuoles (which store nutrients and waste products). The specific organelles present in a cell can vary depending on the type of cell and its function.

Cytochalasin D is a toxin produced by certain fungi that inhibits the polymerization and elongation of actin filaments, which are crucial components of the cytoskeleton in cells. This results in the disruption of various cellular processes such as cell division, motility, and shape maintenance. It is often used in research to study actin dynamics and cellular structure.

Transmission electron microscopy (TEM) is a type of microscopy in which an electron beam is transmitted through a ultra-thin specimen, interacting with it as it passes through. An image is formed from the interaction of the electrons with the specimen; the image is then magnified and visualized on a fluorescent screen or recorded on an electronic detector (or photographic film in older models).

TEM can provide high-resolution, high-magnification images that can reveal the internal structure of specimens including cells, viruses, and even molecules. It is widely used in biological and materials science research to investigate the ultrastructure of cells, tissues and materials. In medicine, TEM is used for diagnostic purposes in fields such as virology and bacteriology.

It's important to note that preparing a sample for TEM is a complex process, requiring specialized techniques to create thin (50-100 nm) specimens. These include cutting ultrathin sections of embedded samples using an ultramicrotome, staining with heavy metal salts, and positive staining or negative staining methods.

Temperature, in a medical context, is a measure of the degree of hotness or coldness of a body or environment. It is usually measured using a thermometer and reported in degrees Celsius (°C), degrees Fahrenheit (°F), or kelvin (K). In the human body, normal core temperature ranges from about 36.5-37.5°C (97.7-99.5°F) when measured rectally, and can vary slightly depending on factors such as time of day, physical activity, and menstrual cycle. Elevated body temperature is a common sign of infection or inflammation, while abnormally low body temperature can indicate hypothermia or other medical conditions.

RNA interference (RNAi) is a biological process in which RNA molecules inhibit the expression of specific genes. This process is mediated by small RNA molecules, including microRNAs (miRNAs) and small interfering RNAs (siRNAs), that bind to complementary sequences on messenger RNA (mRNA) molecules, leading to their degradation or translation inhibition.

RNAi plays a crucial role in regulating gene expression and defending against foreign genetic elements, such as viruses and transposons. It has also emerged as an important tool for studying gene function and developing therapeutic strategies for various diseases, including cancer and viral infections.

The proximal kidney tubule is the initial portion of the renal tubule in the nephron of the kidney. It is located in the renal cortex and is called "proximal" because it is closer to the glomerulus, compared to the distal tubule. The proximal tubule plays a crucial role in the reabsorption of water, electrolytes, and nutrients from the filtrate that has been formed by the glomerulus. It also helps in the secretion of waste products and other substances into the urine.

The proximal tubule is divided into two segments: the pars convoluta and the pars recta. The pars convoluta is the curved portion that receives filtrate from the Bowman's capsule, while the pars recta is the straight portion that extends deeper into the renal cortex.

The proximal tubule is lined with a simple cuboidal epithelium, and its cells are characterized by numerous mitochondria, which provide energy for active transport processes. The apical surface of the proximal tubular cells has numerous microvilli, forming a brush border that increases the surface area for reabsorption.

In summary, the proximal kidney tubule is a critical site for the reabsorption of water, electrolytes, and nutrients from the glomerular filtrate, contributing to the maintenance of fluid and electrolyte balance in the body.

The Epidermal Growth Factor Receptor (EGFR) is a type of receptor found on the surface of many cells in the body, including those of the epidermis or outer layer of the skin. It is a transmembrane protein that has an extracellular ligand-binding domain and an intracellular tyrosine kinase domain.

EGFR plays a crucial role in various cellular processes such as proliferation, differentiation, migration, and survival. When EGF (Epidermal Growth Factor) or other ligands bind to the extracellular domain of EGFR, it causes the receptor to dimerize and activate its intrinsic tyrosine kinase activity. This leads to the autophosphorylation of specific tyrosine residues on the receptor, which in turn recruits and activates various downstream signaling molecules, resulting in a cascade of intracellular signaling events that ultimately regulate gene expression and cell behavior.

Abnormal activation of EGFR has been implicated in several human diseases, including cancer. Overexpression or mutation of EGFR can lead to uncontrolled cell growth and division, angiogenesis, and metastasis, making it an important target for cancer therapy.

'Drosophila proteins' refer to the proteins that are expressed in the fruit fly, Drosophila melanogaster. This organism is a widely used model system in genetics, developmental biology, and molecular biology research. The study of Drosophila proteins has contributed significantly to our understanding of various biological processes, including gene regulation, cell signaling, development, and aging.

Some examples of well-studied Drosophila proteins include:

1. HSP70 (Heat Shock Protein 70): A chaperone protein involved in protein folding and protection from stress conditions.
2. TUBULIN: A structural protein that forms microtubules, important for cell division and intracellular transport.
3. ACTIN: A cytoskeletal protein involved in muscle contraction, cell motility, and maintenance of cell shape.
4. BETA-GALACTOSIDASE (LACZ): A reporter protein often used to monitor gene expression patterns in transgenic flies.
5. ENDOGLIN: A protein involved in the development of blood vessels during embryogenesis.
6. P53: A tumor suppressor protein that plays a crucial role in preventing cancer by regulating cell growth and division.
7. JUN-KINASE (JNK): A signaling protein involved in stress response, apoptosis, and developmental processes.
8. DECAPENTAPLEGIC (DPP): A member of the TGF-β (Transforming Growth Factor Beta) superfamily, playing essential roles in embryonic development and tissue homeostasis.

These proteins are often studied using various techniques such as biochemistry, genetics, molecular biology, and structural biology to understand their functions, interactions, and regulation within the cell.

Adaptor Protein Complex 1 (AP-1) is a group of proteins that function as a complex to play a crucial role in the intracellular transport of various molecules, particularly in the formation of vesicles that transport cargo from one compartment of the cell to another. The AP-1 complex is composed of four subunits: γ, β1, μ1, and σ1. It is primarily associated with the trans-Golgi network and early endosomes, where it facilitates the sorting and packaging of cargo into vesicles for transport to various destinations within the cell. The AP-1 complex recognizes specific sorting signals on the membrane proteins and adaptor proteins, thereby ensuring the accurate delivery of cargo to the correct location. Defects in the AP-1 complex have been implicated in several human diseases, including neurological disorders and cancer.

Fibroblasts are specialized cells that play a critical role in the body's immune response and wound healing process. They are responsible for producing and maintaining the extracellular matrix (ECM), which is the non-cellular component present within all tissues and organs, providing structural support and biochemical signals for surrounding cells.

Fibroblasts produce various ECM proteins such as collagens, elastin, fibronectin, and laminins, forming a complex network of fibers that give tissues their strength and flexibility. They also help in the regulation of tissue homeostasis by controlling the turnover of ECM components through the process of remodeling.

In response to injury or infection, fibroblasts become activated and start to proliferate rapidly, migrating towards the site of damage. Here, they participate in the inflammatory response, releasing cytokines and chemokines that attract immune cells to the area. Additionally, they deposit new ECM components to help repair the damaged tissue and restore its functionality.

Dysregulation of fibroblast activity has been implicated in several pathological conditions, including fibrosis (excessive scarring), cancer (where they can contribute to tumor growth and progression), and autoimmune diseases (such as rheumatoid arthritis).

SRC homology domains, often abbreviated as SH domains, are conserved protein modules that were first identified in the SRC family of non-receptor tyrosine kinases. These domains are involved in various intracellular signaling processes and mediate protein-protein interactions. There are several types of SH domains, including:

1. SH2 domain: This domain is approximately 100 amino acids long and binds to specific phosphotyrosine-containing motifs in other proteins, thereby mediating signal transduction.
2. SH3 domain: This domain is about 60 amino acids long and recognizes proline-rich sequences in target proteins, playing a role in protein-protein interactions and intracellular signaling.
3. SH1 domain: Also known as the tyrosine kinase catalytic domain, this region contains the active site responsible for transferring a phosphate group from ATP to specific tyrosine residues on target proteins.
4. SH4 domain: This domain is present in some SRC family members and serves as a membrane-targeting module by interacting with lipids or transmembrane proteins.

These SH domains allow SRC kinases and other proteins containing them to participate in complex signaling networks that regulate various cellular processes, such as proliferation, differentiation, survival, and migration.

Bicyclo compounds, heterocyclic, refer to a class of organic compounds that contain two rings in their structure, at least one of which is a heterocycle. A heterocycle is a cyclic compound containing atoms of at least two different elements as part of the ring structure. The term "bicyclo" indicates that there are two rings present in the molecule, with at least one common atom between them.

These compounds have significant importance in medicinal chemistry and pharmacology due to their unique structures and properties. They can be found in various natural products and are also synthesized for use as drugs, agrochemicals, and other chemical applications. The heterocyclic rings often contain nitrogen, oxygen, or sulfur atoms, which can interact with biological targets, such as enzymes and receptors, leading to pharmacological activity.

Examples of bicyclo compounds, heterocyclic, include quinolone antibiotics (e.g., ciprofloxacin), benzodiazepines (e.g., diazepam), and camptothecin-derived topoisomerase inhibitors (e.g., irinotecan). These compounds exhibit diverse biological activities, such as antibacterial, antifungal, antiviral, anxiolytic, and anticancer properties.

Dextrans are a type of complex glucose polymers that are formed by the action of certain bacteria on sucrose. They are branched polysaccharides consisting of linear chains of α-1,6 linked D-glucopyranosyl units with occasional α-1,3 branches.

Dextrans have a wide range of applications in medicine and industry. In medicine, dextrans are used as plasma substitutes, volume expanders, and anticoagulants. They are also used as carriers for drugs and diagnostic agents, and in the manufacture of immunoadsorbents for the removal of toxins and pathogens from blood.

Dextrans can be derived from various bacterial sources, but the most common commercial source is Leuconostoc mesenteroides B-512(F) or L. dextranicum. The molecular weight of dextrans can vary widely, ranging from a few thousand to several million Daltons, depending on the method of preparation and purification.

Dextrans are generally biocompatible and non-toxic, but they can cause allergic reactions in some individuals. Therefore, their use as medical products requires careful monitoring and testing for safety and efficacy.

Immunoprecipitation (IP) is a research technique used in molecular biology and immunology to isolate specific antigens or antibodies from a mixture. It involves the use of an antibody that recognizes and binds to a specific antigen, which is then precipitated out of solution using various methods, such as centrifugation or chemical cross-linking.

In this technique, an antibody is first incubated with a sample containing the antigen of interest. The antibody specifically binds to the antigen, forming an immune complex. This complex can then be captured by adding protein A or G agarose beads, which bind to the constant region of the antibody. The beads are then washed to remove any unbound proteins, leaving behind the precipitated antigen-antibody complex.

Immunoprecipitation is a powerful tool for studying protein-protein interactions, post-translational modifications, and signal transduction pathways. It can also be used to detect and quantify specific proteins in biological samples, such as cells or tissues, and to identify potential biomarkers of disease.

Pheromone receptors are a specific type of sensory receptor found in many animals, including insects and mammals, that detect and respond to pheromones. Pheromones are chemical signals that are released by an individual and received by another individual of the same species, which can elicit various behavioral or physiological responses.

Pheromone receptors are located in the sensory organs responsible for detecting chemical stimuli, such as the antennae of insects or the vomeronasal organ (VNO) in mammals. These receptors contain specialized proteins called G protein-coupled receptors (GPCRs) that bind to specific pheromone molecules and trigger a cascade of intracellular signaling events, ultimately leading to the activation of downstream effector pathways.

In insects, pheromone receptors are typically found in olfactory sensory neurons located on the antennae or other peripheral organs. These receptors can detect a wide range of pheromones, including sex pheromones that play a critical role in mating behavior, as well as aggregation pheromones that help to coordinate group behaviors such as feeding or nesting.

In mammals, pheromone receptors are found in the vomeronasal organ (VNO), which is located in the nasal cavity and contains specialized sensory neurons called vomeronasal sensory neurons (VSNs). VSNs express a variety of pheromone receptors that can detect different types of pheromones, including those involved in social recognition, mating behavior, and aggression.

Overall, the activation of pheromone receptors plays a critical role in mediating various aspects of animal behavior and physiology, highlighting their importance in chemical communication and social interaction.

Brefeldin A is a fungal metabolite that inhibits protein transport from the endoplasmic reticulum to the Golgi apparatus. It disrupts the organization of the Golgi complex and causes the redistribution of its proteins to the endoplasmic reticulum. Brefeldin A is used in research to study various cellular processes, including vesicular transport, protein trafficking, and signal transduction pathways. In medicine, it has been studied as a potential anticancer agent due to its ability to induce apoptosis (programmed cell death) in certain types of cancer cells. However, its clinical use is not yet approved.

Ubiquitin-protein ligases, also known as E3 ubiquitin ligases, are a group of enzymes that play a crucial role in the ubiquitination process. Ubiquitination is a post-translational modification where ubiquitin molecules are attached to specific target proteins, marking them for degradation by the proteasome or for other regulatory functions.

Ubiquitin-protein ligases catalyze the final step in this process by binding to both the ubiquitin protein and the target protein, facilitating the transfer of ubiquitin from an E2 ubiquitin-conjugating enzyme to the target protein. There are several different types of ubiquitin-protein ligases, each with their own specificity for particular target proteins and regulatory functions.

Ubiquitin-protein ligases have been implicated in various cellular processes such as protein degradation, DNA repair, signal transduction, and regulation of the cell cycle. Dysregulation of ubiquitination has been associated with several diseases, including cancer, neurodegenerative disorders, and inflammatory responses. Therefore, understanding the function and regulation of ubiquitin-protein ligases is an important area of research in biology and medicine.

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Without Notch trans-endocytosis, there would be too many neurons in a developing embryo. Trans-endocytosis is also involved in ... Trans-endocytosis from neurons to glia has been observed using time-lapse microscopy. Trans-endocytosis also applies to ... Trans-endocytosis is the biological process where material created in one cell undergoes endocytosis (enters) into another cell ... For example, this process is involved when a part of the protein Notch is cleaved off and undergoes endocytosis into its ...
... refers to a form of endocytosis of synaptic vesicles at nerve terminals. In bulk endocytosis, compared to ... Clathrin-mediated endocytosis and bulk endocytosis appear to occur concurrently in highly active synaptic terminals. The ... Pinocytosis Endocytosis Phagocytosis BAR domain syndapin Qualmann B, Koch D, Kessels MM (2011). "Let's go bananas: revisiting ... Bulk endocytosis is activated specifically during intense stimulation, such as during high-frequency trains of action ...
... (RME), also called clathrin-mediated endocytosis, is a process by which cells absorb metabolites ... clathrin-mediated endocytosis remains the best studied. Clathrin-mediated endocytosis of many receptor types begins with the ... adsorptive pinocytosis Pinocytosis Phagocytosis Viropexis Bulk endocytosis Endocytosis Sorkin A, Puthenveedu MA (2013-01-01). " ... However, receptor-mediated endocytosis is also actively implicated in transducing signals from the cell periphery to the ...
... (FEME) is an endocytic pathway found in eukaryotic cells. It requires the activity of ... Rennick JJ, Johnston AP, Parton RG (March 2021). "Key principles and methods for studying the endocytosis of biological and ... "Molecular mechanism of Fast Endophilin-Mediated Endocytosis". The Biochemical Journal. 477 (12): 2327-2345. doi:10.1042/ ...
Within the intestine of the host, Chilomastix trophozoites feed via endocytosis. This brings the particles into the cell and ... Trophozoites feed on the host's intestinal contents such as bacteria through endocytosis. Once the intestinal contents begin to ... doi:10.1111/j.1550-7408.1973.tb03577.x. Martin, Elizabeth; Hine, Robert (2015). "Endocytosis". A Dictionary of Biology. Oxford ... involved in the function of endocytosis, enabling the movement of food particles towards the feeding groove. The flagella ...
Endocytosis and exocytosis are both forms of bulk transport that move materials into and out of cells, respectively, via ... Viruses enter cells through a form of endocytosis that involves their outer membrane fusing with the membrane of the cell. This ... In the case of endocytosis, the cellular membrane folds around the desired materials outside the cell. The ingested particle ... ISBN 978-0-321-77565-8. Transport into the Cell from the Plasma Membrane: Endocytosis - Molecular Biology of the Cell - NCBI ...
Receptor-mediated endocytosis Receptor-mediated endocytosis is a mode of pinocytosis. Proteins in the clathrin coat on the ... Endocytosis is when a cell absorbs a molecule, such as a protein, from outside the cell by engulfing it with the cell membrane ... It is an example of fluid phase endocytosis and is usually a continuous process within the cell. The particles are absorbed ... There are three main types of cytosis: endocytosis (into the cell), exocytosis (out of the cell), and transcytosis (through the ...
"Cohn's discoveries on endocytosis in macrophages have proved fundamental to cell biology, since endocytosis is a process ... Endocytosis and the recycling of plasma membrane. J. Cell Biol. 96:1-27. 1986 With A. A. Aderem, D. S. Cohen, and S. D. Wright ... Endocytosis. Annu. Rev. Biochem. 46:669-722. 1978 With N. Nogueira. Trypanosoma cruzi: In vitro induction of macrophage ... moving beyond endocytosis to study macrophages' secretions and identifying more than 50 products of macrophages that play " ...
Marsh M (2001). Endocytosis. Oxford University Press. p. vii. ISBN 978-0-19-963851-2. Stalder D, Gershlick DC (November 2020 ... Many cells ingest food and other materials through a process of endocytosis, where the outer membrane invaginates and then ...
In animals, vacuoles serve in exocytosis and endocytosis processes. Endocytosis refers to when substances are taken into the ... Cooper G (2000). "Endocytosis". The Cell: A Molecular Approach. Sinauer Associates, Inc. Retrieved 2008-12-09. Lodish H, et al ... There are two types of endocytosis, phagocytosis (cell eating) and pinocytosis (cell drinking). In phagocytosis, cells engulf ...
Endocytosis. In: Cuatrecasas P, Greaves MF, eds. Receptors and Recognition. London: Chapman & Hall, 1977:105-41. 26. Stossel TP ... Filamin A interaction with the CXCR4 third intracellular loop regulates endocytosis and signaling of WT and WHIM-like receptors ...
Binding to αv integrin results in endocytosis of the virus particle via clathrin-coated pits. Attachment to αV integrin ... Meier O, Greber UF (February 2004). "Adenovirus endocytosis". The Journal of Gene Medicine. 6 (Suppl 1): S152-S163. doi:10.1002 ... stimulates cell signaling and thus induces actin polymerization, which facilitates clathrin-mediated endocytosis, and results ...
The endocytosis and exocytosis of vesicles allows cells to communicate, to transfer nutrients, to import signaling receptors, ... MBInfo - Clathrin Mediated Endocytosis Eukaryotic Linear Motif resource motif class LIG_Clathr_ClatBox_1 Eukaryotic Linear ... Clathrin-mediated endocytosis (CME) regulates many cellular physiological processes such as the internalization of growth ... Review on involvement of clathrin in plant endocytosis) Royle SJ, Bright NA, Lagnado L (April 2005). "Clathrin is required for ...
Kotowski SJ, Hopf FW, Seif T, Bonci A, von Zastrow M (July 2011). "Endocytosis promotes rapid dopaminergic signaling". Neuron. ... "EHD Home Page: An ATPase involved in membrane remodelling". www.endocytosis.org. Retrieved 2016-10-15. "Help - Homo_sapiens - ...
1999). "Dynamin II is involved in endocytosis but not in the formation of transport vesicles from the trans-Golgi network". J. ... They have been implicated in cell processes such as endocytosis and cell motility, and in alterations of the membrane that ... Sever S (2003). "Dynamin and endocytosis". Curr. Opin. Cell Biol. 14 (4): 463-7. doi:10.1016/S0955-0674(02)00347-2. PMID ... Lundmark R, Carlsson SR (Nov 2003). "Sorting nexin 9 participates in clathrin-mediated endocytosis through interactions with ...
DENV undergoes endocytosis. Acidification of the endosome leads to a conformational change of E, exposing a fusion peptide ...
Exocytosis and Endocytosis. Methods in Molecular Biology. Vol. 1174. New York, NY: Humana Press. pp. 139-156. doi:10.1007/978-1 ...
Formins regulate endocytosis. mDia 1 localizes to endosomes and regulates phagocytic cup formation in macrophages. mDia1 (and ... Stress fiber formation Endocytosis Microtubule functions Stress fibers are acto-myosin structures, which are important for ...
Most pathogenic variants are missense variants, and have been shown to impair synaptic vesicle endocytosis in a dominant ... Sever S (2003). "Dynamin and endocytosis". Curr. Opin. Cell Biol. 14 (4): 463-7. doi:10.1016/S0955-0674(02)00347-2. PMID ... 1997). "Amphiphysin heterodimers: potential role in clathrin-mediated endocytosis". Mol. Biol. Cell. 8 (10): 2003-15. doi: ... June 2015). "Epileptic encephalopathy-causing mutations in DNM1 impair synaptic vesicle endocytosis". Neurology. Genetics. 1 (1 ...
Sever S (2003). "Dynamin and endocytosis". Curr. Opin. Cell Biol. 14 (4): 463-7. doi:10.1016/S0955-0674(02)00347-2. PMID ... induces tubular membrane invaginations and participates in endocytosis". J. Biol. Chem. 279 (38): 40091-9. doi:10.1074/jbc. ...
PI(3,4)P2 has, however, been shown to play a role in the invagination phase of clathrin-mediated endocytosis. C2α and C2β are ... Posor Y, Eichhorn-Grünig M, Haucke V (June 2015). "Phosphoinositides in endocytosis". Biochimica et Biophysica Acta (BBA) - ...
Sahay, G (2010). "Endocytosis of Nanomedicines". Journal of Controlled Release. 145 (3): 182−195. doi:10.1016/j.jconrel.2010.01 ... Carriers generally gain entry to the cell interior via either Endocytosis (the majority of carriers) or Fusion with the cell's ... Most medically applicable ASOs are naked molecules that are able to enter cells through endocytosis and exert their therapeutic ... Patel, S (2019). "Brief update on endocytosis of nanomedicines". Advanced Drug Delivery Reviews. 144: 90-111. doi:10.1016/j. ...
Qualmann B, Kessels MM (2003). "Endocytosis and the cytoskeleton". Int. Rev. Cytol. International Review of Cytology. 220: 93- ...
The bacterium's ability to synthesize sterols may also be involved in its capacity for membrane invaginations and endocytosis ... This may suggest that Planctomycetota and eukaryote endocytosis mechanism share a common evolutionary origin, that the two ... Fuerst, John A.; Sagulenko, Evgeny (August 2014). "Towards understanding the molecular mechanism of the endocytosis-like ... Jermy, Andrew (August 2010). "Evolution: Bacterial endocytosis uncovered". Nature Reviews Microbiology. 8 (8): 534-535. doi: ...
Sengar AS, Wang W, Bishay J, Cohen S, Egan SE (Mar 1999). "The EH and SH3 domain Ese proteins regulate endocytosis by linking ... Fernández-Chacón R, Achiriloaie M, Janz R, Albanesi JP, Südhof TC (Apr 2000). "SCAMP1 function in endocytosis". The Journal of ... Fernández-Chacón R, Achiriloaie M, Janz R, Albanesi JP, Südhof TC (Apr 2000). "SCAMP1 function in endocytosis". The Journal of ... A protein connection between exocytosis and endocytosis?". The Journal of Biological Chemistry. 274 (26): 18446-54. doi:10.1074 ...
Fernández-Chacón R, Achiriloaie M, Janz R, Albanesi JP, Südhof TC (April 2000). "SCAMP1 function in endocytosis". The Journal ...
Qualmann B, Kessels MM (2003). "Endocytosis and the cytoskeleton". Int. Rev. Cytol. International Review of Cytology. 220: 93- ...
Mellman I (1996). "Endocytosis and molecular sorting". Annual Review of Cell and Developmental Biology. 12: 575-625. doi: ... Molecules can be internalized via receptor-mediated endocytosis in clathrin-coated vesicles. Other types of vesicles also form ... Internalization of these receptors from the plasma membrane occurs by receptor-mediated endocytosis. LDL is released in ... Dautry-Varsat A (March 1986). "Receptor-mediated endocytosis: the intracellular journey of transferrin and its receptor". ...
Fernández-Chacón R, Achiriloaie M, Janz R, Albanesi JP, Südhof TC (April 2000). "SCAMP1 function in endocytosis". J. Biol. Chem ... Fernández-Chacón R, Achiriloaie M, Janz R, Albanesi JP, Südhof TC (2000). "SCAMP1 function in endocytosis". J. Biol. Chem. 275 ...
Endocytosis at biologyreference.com Endocytosis - researching endocytic mechanisms at endocytosis.org Clathrin-mediated ... It was recently found that an eisosome serves as a portal of endocytosis in yeast. The major route for endocytosis in most ... Endocytosis pathways can be subdivided into four categories: namely, receptor-mediated endocytosis (also known as clathrin- ... Stage 1 Stage 2 Stage 3 Endocytosis animation (1) Endocytosis animation (2) Active transport Emperipolesis RAP6 (Rab5- ...
SECRETION AND ENDOCYTOSIS IN INSULIN-STIMULATED RAT ADRENAL MEDULLA CELLS Susan J. Abrahams, Susan J. Abrahams ... Susan J. Abrahams, Eric Holtzman; SECRETION AND ENDOCYTOSIS IN INSULIN-STIMULATED RAT ADRENAL MEDULLA CELLS . J Cell Biol 1 ... Subsequent to the period of intense exocytosis and endocytosis, there is a transient accumulation of lipid droplets in the ...
A live cell imaging of phagocytosis and endocytosis. Published by Pierre Jean Ferron on February 21, 2017. February 21, 2017. ...
Chemical and structural modifications of alpha 2-macroglobulin: effects on receptor binding and endocytosis studied in an in ... "Chemical and structural modifications of alpha 2-macroglobulin: effects on receptor binding and endocytosis studied in an in ... Chemical and structural modifications of alpha 2-macroglobulin: effects on receptor binding and endocytosis studied in an in ... "Chemical and structural modifications of alpha 2-macroglobulin: effects on receptor binding and endocytosis studied in an in ...
Notably, LRP-1-mediated endocytosis of ADAMTS-5 is impaired in chondrocytes of OA cartilage, with ∼90% reduction in protein ... Here, we report that post-translational endocytosis of ADAMTS-5 by chondrocytes regulates its extracellular activity. We found ... mutagenesis of ADAMTS-5 identified that the noncatalytic first thrombospondin and spacer domains mediate its endocytosis. The ... LRP-1-mediated endocytosis regulates extracellular activity of ADAMTS-5 in articular cartilage. ...
Endocytosis and Degradation of BMP-2 and BMPRs. As stated in previous sections, BMP-2-BMPR complexes can be endocytosed into ... However, upon endocytosis, the complex continues as a signaling endosome, and is degraded (or recycled) to the plasma membrane ... Ehrlich, M. Endocytosis and trafficking of BMP receptors: Regulatory mechanisms for fine-tuning the signaling response in ... As mentioned previously, BMPR localization on the plasma membrane determines endocytosis and which signaling pathways are ...
Big gulps: specialized membrane domains for rapid receptor-mediated endocytosis. / McNiven, Mark A. In: Trends in Cell Biology ... McNiven, Mark A. / Big gulps : specialized membrane domains for rapid receptor-mediated endocytosis. In: Trends in Cell Biology ... McNiven, M. A. (2006). Big gulps: specialized membrane domains for rapid receptor-mediated endocytosis. Trends in Cell Biology ... McNiven, MA 2006, Big gulps: specialized membrane domains for rapid receptor-mediated endocytosis, Trends in Cell Biology, ...
Brain aluminum entry from the blood may involve transferrin-receptor mediated endocytosis and not all aluminum that enters the ... Radiofrequency electromagnetic fields increase the rate of endocytosis in vitro.Nov 01, 2008. ...
Do endocytosis and exocytosis need energy? If so, where does the energy come from?. Biology Movement In and Out of Cells ...
EGFR endocytosis is a novel therapeutic target in lung cancer with wild-type EGFR. In: Oncotarget. 2014 ; Vol. 5, No. 5. pp. ... EGFR endocytosis is a novel therapeutic target in lung cancer with wild-type EGFR. / Jo, Ukhyun; Park, Kyong Hwa; Whang, Young ... EGFR endocytosis is a novel therapeutic target in lung cancer with wild-type EGFR. Oncotarget. 2014;5(5):1265-1278. doi: ... Jo, U., Park, K. H., Whang, Y. M., Sung, J. S., Won, N. H., Park, J. K., & Kim, Y. H. (2014). EGFR endocytosis is a novel ...
Although the well-conserved clathrin-mediated mechanism of endocytosis has been well characterized, relativ … ... Modulation of endocytosis by both physical stimuli and chemical ligands has been reported in plants. Here, we review the effect ... Although the well-conserved clathrin-mediated mechanism of endocytosis has been well characterized, relatively little is known ... of salinity-one of the most deleterious environmental assaults-on endocytosis and intracellular trafficking. ...
Clathrin-mediated endocytosis (CME) is used to internalize a diverse range of cargo proteins from the cell surface, often in ... In neurons, the rapid endocytosis of GluA2-containing AMPA receptors (AMP ARs) in response to NMDA receptor (NMD AR) ... Clathrin-mediated endocytosis (CME) is used to internalize a diverse range of cargo proteins from the cell surface, often in ... In neurons, the rapid endocytosis of GluA2-containing AMPA receptors (AMP ARs) in response to NMDA receptor (NMD AR) ...
... , ... Biomarkers of morphine tolerance and dependence are prevented by morphine‐induced endocytosis of a mutant μ‐opioid receptor. ...
The paper, titled "Hypoxic Induction of Exosome Uptake through Proteoglycan-Dependent Endocytosis Fuels the Lipid Droplet ... New paper published describes how proteoglycan-dependent endocytosis feeds gliomas lipid uptake ... New paper published describes how proteoglycan-dependent endocytosis feeds gliomas lipid uptake ... New paper published describes how proteoglycan-dependent endocytosis feeds gliomas lipid uptake ...
Cellular Endocytosis of Nanoparticles. Disposition of Nanoparticles Following Oral Administration. Nanoscale World via the ... Endocytosis of Nanoparticles. Nuclear Transport. Cell Transition/Translocation. Practical Application of Nanomedicines. ...
Expression of α-Synuclein Reduces Neurotransmitter Release by Inhibiting Synaptic Vesicle Reclustering after Endocytosis. Venu ...
... demonstrating CFTR endocytosis as a function of time. Selective cell surface biotinylation and western blotting were made use ... CFTR endocytosis was linear among zero and 7.five min. Ezrin abundance within the whole cell lysate (WCL) was employed as a ... Stern blots (A), representative densitometry values (B) and summary of experiments (C) demonstrating CFTR endocytosis By SFRP1 ... Summary of data demonstrating that CFTR endocytosis was linear amongst 0-5 min (A). Hence, in the recycling assays endocytic ...
First, we found that the rate of endocytosis (τ) was faster at MFN2 KD synapses than at CTRL KD synapses (Fig. 5C). The NH4Cl ... We measured the rate of endocytosis and the size of the readily releasable pool (RRP), reserve pool (RP), and total SV pool ... Endocytosis occurs during exocytosis; therefore, to accurately measure exocytosis, a V-ATPase inhibitor (e.g., folimycin) is ... 2001) Calcium influx selects the fast mode of endocytosis in the synaptic terminal of retinal bipolar cells. Proc Natl Acad Sci ...
Endocytosis and osteoblast differentiation is arrested by inhibition of dynamin-dependent endocytosis. (A,B) Confluent C2C12 ... and caveolae-mediated endocytosis [six,eleven]. Contemplating that inhibition of dynamin-dependent endocytosis has an effect on ... Further experiments on BMP-two induced Smad1/five/8-BMPRI dissociation in the track record of endocytosis inhibition will give ... 12969760To check no matter if inhibition of endocytosis during the initial stage of BMP-two sign transduction impacts ...
Post-fusion with plasma membranes, many viruses enter cells by endocytosis and clathrin-mediated endocytosis (Inoue et al., ... Keywords: endolysosome, endocytosis, two pore channel. Citation: Khan N, Chen X and Geiger JD (2020) Role of Endolysosomes in ... Coronaviruses enter host cells by pH-dependent endocytosis (Yang et al., 2004; Burkard et al., 2014; Hoffmann et al., 2020b) ... The spike protein of SARS-CoV-2 is necessary for viral entry into cells governed by receptor-mediated endocytosis (Hofmann and ...
Lysosomes and Endocytosis June 16 - 21, 2024 ×. Contact Us. MyGRC Account. Check your application status, complete your ...
Taken together, our studies show that SAP97 plays a conserved role in regulating 5-HT2AR endocytosis and ERK1/2 signaling, but ... Role of SAP97 in the regulation of 5-HT2AR endocytosis and signaling. ... Role of SAP97 in the regulation of 5-HT2AR endocytosis and signaling. ... 5-HT2AR interacts with SAP97 using bioluminescence energy transfer and that overexpression of SAP97 retards 5-HT2AR endocytosis ...
Hypoxia promotes VLDLR-mediated uptake of lipoproteins by endocytosis. It has been proposed that the VLDLR mediates uptake of ... Hypoxia-mediated lipid accumulation in HL-1 cells requires exogenous lipoproteins and is mediated by endocytosis of ... Potential mechanisms for lipid uptake include receptor-mediated endocytosis of lipoproteins, lipoprotein lipase-catalyzed (LPL- ... and VLDLR promoted the endocytosis of lipoproteins. Furthermore, VLDLR expression was higher in ischemic compared with ...
Studies on endocytic mechanisms of the Menkes copper-translocating P-type ATPase (ATP7A; MNK). Endocytosis of the Menkes ... utilizing both clathrin-dependent and clathrin-independent endocytosis. Menkes disease can be caused by both copper transport ...
endocytosis. cytokinesis. actin mechanics. energy conversion. force transduction. Experimental organism. S. cerevisiae. ...
endocytosis Attribution Names. Sungsu Kim Yogesh P. Wairkar Richard W. Daniels Aaron DiAntonio Published. J Cell Biol. 188: 717 ...
  • Endocytosis includes pinocytosis (cell drinking) and phagocytosis (cell eating). (wikipedia.org)
  • Endocytosis pathways can be subdivided into four categories: namely, receptor-mediated endocytosis (also known as clathrin-mediated endocytosis), caveolae, pinocytosis, and phagocytosis. (wikipedia.org)
  • Contributors describe how cargo enters the cell via clathrin-mediated and clathrin-independent pathways, including caveolar endocytosis, micropinocytosis, cholesterol-sensitive endocytosis, phagocytosis, and the CLIC/GEEC pathway. (cshlpress.com)
  • There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type. (kegg.jp)
  • The migration of ATP7A appears to involve amino acid sequences in the carboxyl terminus, utilizing both clathrin-dependent and clathrin-independent endocytosis. (medscape.com)
  • Hands-on activity to help students who are blind or visually impaired understand endocytosis and exocytosis by making models. (perkins.org)
  • Movement into the cell in this manner is called endocytosis and movement out of the cell in this manner is called exocytosis. (perkins.org)
  • After students are comfortable with endocytosis, describe the movement of substances out of the cell by exocytosis. (perkins.org)
  • Subsequent to the period of intense exocytosis and endocytosis, there is a transient accumulation of lipid droplets in the adrenalin cells. (rupress.org)
  • endocytosis - [en΄dōsī tō′sis] n. a process in which a cell engulfs a large molecule, bacterium, etc. and forms a vesicle around it: opposed to EXOCYTOSIS endocytic [en΄dōsit′ik] adj. (en-academic.com)
  • Do endocytosis and exocytosis need energy? (socratic.org)
  • In contrast, the serum level of factor VIII was not significantly elevated in the KIF13BΔCG as compared to wild-type mice, suggesting that the CAP-Gly domain of KIF13B selectively regulates Low density lipoprotein Related Protein 1-mediated lipoprotein endocytosis. (tufts.edu)
  • Endocytosis regulates the turnover of cell surface localized receptors, which are crucial for plants to rapidly respond to stimuli. (cas.cz)
  • LRP-1-mediated endocytosis regulates extracellular activity of ADAMTS-5 in articular cartilage. (ox.ac.uk)
  • Here, we report that post-translational endocytosis of ADAMTS-5 by chondrocytes regulates its extracellular activity. (ox.ac.uk)
  • These processes involve the uptake of larger membrane areas than clathrin-mediated endocytosis and caveolae pathway. (wikipedia.org)
  • During endocytosis, extracellular molecules and plasma membrane components are selectively internalized by cells. (cshlpress.com)
  • Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. (kegg.jp)
  • Endocytosis - is a process where cells absorb material (molecules such as proteins) from the outside by engulfing it with their cell membrane. (en-academic.com)
  • endocytosis - Internalization of substances from the extracellular environment through the formation of vesicles formed from the plasma membrane. (en-academic.com)
  • endocytosis - noun The process by which the plasma membrane of a cell folds inwards to ingest material. (en-academic.com)
  • McNiven, MA 2006, ' Big gulps: specialized membrane domains for rapid receptor-mediated endocytosis ', Trends in Cell Biology , vol. 16, no. 10, pp. 487-492. (elsevierpure.com)
  • Insulin release involves the packaging of insulin in small (diameter approximate to0.3 mum) secretory granules, the trafficking of these granules to the plasma membrane, the exocytotic fusion of the granules with the plasma membrane and eventually the retrieval of the secreted membranes by endocytosis. (lu.se)
  • In this study, evidence shows that EVs can fuel hypoxic glioma cells to acquire a lipid droplet (LD+) phenotype and such effect is associated with increased EV internalization through a hypoxia-sensitive mechanism dependent on heparan sulfate proteoglycan (HSPG) receptor and lipid raft-mediated endocytosis. (lu.se)
  • Attachment of ubiquitin (Ub) to cell surface proteins serves as a signal for internalization via clathrin-mediated endocytosis (CME). (rcsb.org)
  • We also show that 5-HT2AR interacts with SAP97 using bioluminescence energy transfer and that overexpression of SAP97 retards 5-HT2AR endocytosis , while single hairpin RNA knockdown facilitates 5-HT2AR internalization. (bvsalud.org)
  • Clathrin-mediated endocytosis is the only pathway dependent on both clathrin and dynamin. (wikipedia.org)
  • The paper, titled "Hypoxic Induction of Exosome Uptake through Proteoglycan-Dependent Endocytosis Fuels the Lipid Droplet Phenotype in Glioma" and published at Molecular Cancer Research, shows that exosome-like extracellular vesicles (EVs) may serve anabolic functions by transforming hypoxic, patient-derived human glioblastoma cell lines into a lipid loaded phenotype. (lu.se)
  • Coated pits can concentrate large extracellular molecules that have different receptors responsible for the receptor-mediated endocytosis of ligands, e.g. low density lipoprotein, transferrin, growth factors, antibodies and many others. (wikipedia.org)
  • Interestingly, we found that EGF-induced EGFR endocytosis is existed differently between gefitinib-sensitive and -insensitive lung cancer cell lines. (korea.ac.kr)
  • Rab25 knockdown caused the changed EGFR endocytosis and reverted the gefitinib response in gefitinib-sensitive lung cancer with wtEGFR in vitro and in vivo. (korea.ac.kr)
  • Taken together, our findings suggest a novel insight that EGFR endocytosis is a rational therapeutic target in lung cancer with wtEGFR, in which the combined efficacy with gefitinib is expected. (korea.ac.kr)
  • Furthermore, we demonstrated that Rab25 plays an important role in EGFR endocytosis and gefitinib therapy. (korea.ac.kr)
  • Confocal microscopy showed that the 15-min decrease in binding is due to EGFR endocytosis. (cdc.gov)
  • Taken together, these results indicate that a high level of CHC activity is required for receptor-mediated endocytosis in nonneuronal cells but is largely dispensable for maintenance of synaptic vesicle pools. (nih.gov)
  • Written and edited by experts in the field, this collection from Cold Spring Harbor Perspectives in Biology covers all of the major pathways of endocytosis and postendocytic trafficking and how they regulate cellular and organismal physiology. (cshlpress.com)
  • Potocytosis is a form of receptor-mediated endocytosis that uses caveolae vesicles to bring molecules of various sizes into the cell. (wikipedia.org)
  • As expected Caenorhabditis elegans chc-1(b1025ts) mutant animals are defective in receptor-mediated endocytosis and arrest development soon after being shifted to the restrictive temperature. (nih.gov)
  • Here, we took advantage of the partially functional TPLATE allele, WDXM2, to investigate a role for TPC-dependent endocytosis in receptor-mediated signaling. (cas.cz)
  • In particular we study the molecular mechanisms that underlie the cell's sorting machineries responsible for receptor-mediated endocytosis and for secretion, and how they are high jacked by toxins, viruses and bacterial pathogens to enter cells. (researchschool.nl)
  • Scholars@Duke publication: Chemical and structural modifications of alpha 2-macroglobulin: effects on receptor binding and endocytosis studied in an in vivo model. (duke.edu)
  • Although the number of components identified as being used during this essential process has increased substantially over the past decade, an appreciation for how receptor-mediated endocytosis is organized at a broader, cellular scale is still mostly undefined. (elsevierpure.com)
  • Our findings provide evidence that TPC-mediated endocytosis and degradation of CLAVATA1 is a mechanism to dampen CLAVATA3-mediated signaling during plant development. (cas.cz)
  • Endocytosis is a cellular process in which substances are brought into the cell. (wikipedia.org)
  • The encoded protein localizes to clathrin-coated vesicles, where it binds components of the adapter protein complexes and aids in endocytosis. (nih.gov)
  • Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. (kegg.jp)
  • Notably, LRP-1-mediated endocytosis of ADAMTS-5 is impaired in chondrocytes of OA cartilage, with ∼90% reduction in protein levels of LRP-1 without changes in its mRNA levels. (ox.ac.uk)
  • Taken together, our studies show that SAP97 plays a conserved role in regulating 5-HT2AR endocytosis and ERK1/2 signaling, but plays a novel role in regulating 5-HT2AR G protein coupling. (bvsalud.org)
  • Role of SAP97 in the regulation of 5-HT2AR endocytosis and signaling. (bvsalud.org)
  • endocytosis - [ˌɛndəʊsʌɪ təʊsɪs] noun Biology the taking in of matter by a living cell by enclosing it in a vacuole. (en-academic.com)
  • The evolutionary ancient TPLATE complex (TPC) plays an essential role in endocytosis in Arabidopsis plants. (cas.cz)
  • Domain-deletion mutagenesis of ADAMTS-5 identified that the noncatalytic first thrombospondin and spacer domains mediate its endocytosis. (ox.ac.uk)
  • Unlike most endocytosis that uses caveolae to deliver contents of vesicles to lysosomes or other organelles, material endocytosed via potocytosis is released into the cytosol. (wikipedia.org)
  • As endocytosis is described, have the students model this movement using the string and marble. (perkins.org)
  • The deposition of yolk into the oocyte is governed by receptor-mediated endocytosis, namely by a receptor complex called MERC. (nih.gov)
  • When the cytoplasmic pH was reversed to physiological values, both fluid phase endocytosis and receptor- mediated endocytosis resumed with identical kinetics. (scienceopen.com)
  • Clathrin proteins involved in endocytosis form a lattice that can dramatically change its shape to form the vesicle. (genengnews.com)
  • The yeast protein Pan1p (human EPS15) is known to anchor several proteins (scaffolding protein) during the later stages of yeast clathrin-mediated endocytosis. (ddw-online.com)
  • Thus, Nullo regulates scission to restrain endocytosis of proteins essential for furrow stabilization at the onset of cellularization. (princeton.edu)
  • The role of Rab5 proteins in endocytosis in Plasmodium falciparum. (ox.ac.uk)
  • Step 1: Endocytosis allows cells (blue-green) to import proteins and other particles (pink). (nih.gov)
  • Cells ingest proteins and engulf bacteria by a gymnastic, shape-shifting process called endocytosis. (nih.gov)
  • Synaptic vesicles that have fused to the plasma membrane are then recycled to make new vesicles in a process involving slow (middle) or fast (right) endocytosis. (elifesciences.org)
  • When a stronger and prolonged stimulus was used, the fast form of endocytosis dominated according to membrane capacitance measurements, while the fluorescent signal reported almost no recovery of the acidic pH in vesicles for about 30 seconds after exocytosis. (elifesciences.org)
  • Clathrin-mediated endocytosis is an important type of endocytosis in which the internalised vesicles are coated with the protein, clathrin. (ddw-online.com)
  • Its pore is thought to dilate until flattening (full-collapse), followed by classical endocytosis to retrieve vesicles. (nih.gov)
  • Clathrin-mediated endocytosis in plants is an essential process but the underlying mechanisms are poorly understood, not least because of the extreme intracellular turgor pressure acting against the formation of endocytic vesicles. (cherrybiotech.com)
  • Beta-arrestins target G protein-coupled receptors (GPCRs) for endocytosis via clathrin-coated vesicles. (nih.gov)
  • While plant CME is actin independent, the authors identify that the 4 evolutionarily ancient octameric TPLATE complex mediates membrane bending against high 5 turgor pressure in plant clathrin-mediated endocytosis. (cherrybiotech.com)
  • In contrast to other models, plant endocytosis is independent of actin, indicating a mechanistically distinct solution. (cherrybiotech.com)
  • We propose that developmentally regulated endocytosis can coordinate actin/PM remodeling to directly drive furrow dynamics during morphogenesis. (princeton.edu)
  • The migration of ATP7A appears to involve amino acid sequences in the carboxyl terminus, utilizing both clathrin-dependent and clathrin-independent endocytosis. (medscape.com)
  • Both modes of endocytosis require dynamin (turquoise), a protein that pinches off the membrane. (elifesciences.org)
  • Regulating dynamin dynamics during endocytosis. (nih.gov)
  • Scientists have known for years that dynamin plays the major role in endocytosis. (nih.gov)
  • Clathrin-mediated endocytosis (CME) is a critical eukaryotic cellular process that regulates a 33 wide range of physiological processes, for example, mediating the internalization of receptors 34 and transporters. (cherrybiotech.com)
  • Lysosomes are acidic organelles that are critically involved in a number of physiological processes, including macromolecule degradation, endocytosis, autophagy, exocytosis and cholesterol homeostasis. (diva-portal.org)
  • Fast endocytosis involves the production of large structures called endosomes that slowly become more acidic due to the action of proton pumps. (elifesciences.org)
  • However, stronger stimulation leads to conflicting results: patch clamp studies suggest that a fast mode of endocytosis becomes dominant, whereas fluorescent imaging reports a slowed time course for vesicle recycling. (elifesciences.org)
  • Endocytosis serves several cellular functions such as nutrient intake and the recycling of neurotransmitters. (ddw-online.com)
  • The megalin-dependent, cubilin-mediated endocytosis of Tf and the potential of the receptors thereby to facilitate iron uptake were further confirmed by analyzing the uptake of (125)I- and (59)Fe-labeled Tf in cultured yolk sac cells. (pasteur.fr)
  • Endocytosis is the absorption route cells use to engulf large molecules and draw them within the cytoplasm. (genengnews.com)
  • Scientists from Tokyo University of Science have shed light on how various molecules are recruited in endocytosis, a cellular process of bringing in different types of materials from the outside. (ddw-online.com)
  • NIH-funded study reveals protein, fatty molecules and cellular energy work together during endocytosis. (nih.gov)
  • New research reveals, on the real-life scale of nanometers, how individual molecules work together during a single act of endocytosis. (nih.gov)
  • Endocytosis from coated pits of Shiga toxin: a glycolipid-binding protein from Shigella dysenteriae 1. (rupress.org)
  • Disengagement of RalGDS from E-cadherin initiates endocytosis of RalGDS and its novel interaction partners cdc42, VEGFR2, cleaved ß- catenin , and PKC-ζ as well as its known interaction partner K- Ras . (bvsalud.org)
  • The EMBL scientists utilized human cell lines that had been tagged with fluorescent markers on sites where endocytosis occurs. (genengnews.com)
  • However, fluorescent imaging revealed a delayed and slow time course for the pH change corresponding to the slower mode of endocytosis only. (elifesciences.org)
  • Answering these fundamental questions of cell biology will help scientists better understand the whole process of endocytosis. (genengnews.com)
  • Here, we show that CTLA-4 can capture its ligands from opposing cells by a process of trans-endocytosis. (birmingham.ac.uk)
  • Genetic defects in endocytosis - and the reverse process, exocytosis - are linked to a host of human diseases, including muscular dystrophy, Alzheimer's disease, leukemia and many others. (nih.gov)
  • Scientists reveal key regulatory processes underlying the molecular mechanisms of endocytosis. (ddw-online.com)
  • The new mechanism of cellular endocytosis revealed in this study not only elucidates the molecular mechanisms but will also lead to the development of therapeutic methods," hopes Prof Toshima. (ddw-online.com)
  • Finally, we provide evidence that microtubules and kinesin molecular motors are required to potentiate endoA3-dependent endocytosis. (unamur.be)
  • Trans-endocytosis of CD80 and CD86: a molecular basis for the cell-extrinsic function of CTLA-4. (birmingham.ac.uk)
  • Dive into the research topics of 'Trans-endocytosis of CD80 and CD86: a molecular basis for the cell-extrinsic function of CTLA-4. (birmingham.ac.uk)
  • What is the Molecular Basis of CTLA-4 Trans-Endocytosis? (birmingham.ac.uk)
  • The investigators found that by using computational analysis for the captured images, they were able to demonstrate that the surface area of the clathrin coat does not change during endocytosis. (genengnews.com)
  • To restore this altered pathway, we developed a cell-permeable peptide (PEP3) with a strong safety profile that is able to interfere with ADAM10 endocytosis, upregulating the postsynaptic localization and activity of ADAM10. (nih.gov)
  • Step 4: At the completion of endocytosis, the cell has fully internalized the cargo within a bubble known as a vesicle. (nih.gov)
  • Endocytosis and serpentine filopodia drive blebbishield-mediated resurrection of apoptotic cancer stem cells. (bvsalud.org)
  • 25. Early steps of clathrin-mediated endocytosis involved in phagosomal escape of Fcgamma receptor-targeted adenovirus. (nih.gov)
  • Here we demonstrate that endocytosis drives serpentine filopodia to construct blebbishields from apoptotic bodies and that a VEGF -VEGFR2- endocytosis - p70S6K axis governs subsequent transformation. (bvsalud.org)