Databases, Factual
Extensive collections, reputedly complete, of facts and data garnered from material of a specialized subject area and made available for analysis and application. The collection can be automated by various contemporary methods for retrieval. The concept should be differentiated from DATABASES, BIBLIOGRAPHIC which is restricted to collections of bibliographic references.
Databases as Topic
Databases, Protein
Databases, Bibliographic
Extensive collections, reputedly complete, of references and citations to books, articles, publications, etc., generally on a single subject or specialized subject area. Databases can operate through automated files, libraries, or computer disks. The concept should be differentiated from DATABASES, FACTUAL which is used for collections of data and facts apart from bibliographic references to them.
Databases, Nucleic Acid
Internet
Information Storage and Retrieval
Database Management Systems
Software
User-Computer Interface
Computational Biology
A field of biology concerned with the development of techniques for the collection and manipulation of biological data, and the use of such data to make biological discoveries or predictions. This field encompasses all computational methods and theories for solving biological problems including manipulation of models and datasets.
Systems Integration
Algorithms
Expressed Sequence Tags
Randomized Controlled Trials as Topic
MEDLINE
Sequence Alignment
The arrangement of two or more amino acid or base sequences from an organism or organisms in such a way as to align areas of the sequences sharing common properties. The degree of relatedness or homology between the sequences is predicted computationally or statistically based on weights assigned to the elements aligned between the sequences. This in turn can serve as a potential indicator of the genetic relatedness between the organisms.
Data Mining
Abstracting and Indexing as Topic
Sequence Analysis, Protein
Sequence Analysis, DNA
Terminology as Topic
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
Proteins
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.
Information Systems
PubMed
A bibliographic database that includes MEDLINE as its primary subset. It is produced by the National Center for Biotechnology Information (NCBI), part of the NATIONAL LIBRARY OF MEDICINE. PubMed, which is searchable through NLM's Web site, also includes access to additional citations to selected life sciences journals not in MEDLINE, and links to other resources such as the full-text of articles at participating publishers' Web sites, NCBI's molecular biology databases, and PubMed Central.
Computer Graphics
Computer Communication Networks
Online Systems
Vocabulary, Controlled
A specified list of terms with a fixed and unalterable meaning, and from which a selection is made when CATALOGING; ABSTRACTING AND INDEXING; or searching BOOKS; JOURNALS AS TOPIC; and other documents. The control is intended to avoid the scattering of related subjects under different headings (SUBJECT HEADINGS). The list may be altered or extended only by the publisher or issuing agency. (From Harrod's Librarians' Glossary, 7th ed, p163)
Molecular Sequence Annotation
Amino Acid Sequence
CD-ROM
Search Engine
Gene Expression Profiling
Evidence-Based Medicine
An approach of practicing medicine with the goal to improve and evaluate patient care. It requires the judicious integration of best research evidence with the patient's values to make decisions about medical care. This method is to help physicians make proper diagnosis, devise best testing plan, choose best treatment and methods of disease prevention, as well as develop guidelines for large groups of patients with the same disease. (from JAMA 296 (9), 2006)
Treatment Outcome
Review Literature as Topic
Published materials which provide an examination of recent or current literature. Review articles can cover a wide range of subject matter at various levels of completeness and comprehensiveness based on analyses of literature that may include research findings. The review may reflect the state of the art. It also includes reviews as a literary form.
Genome
Base Sequence
Knowledge Bases
Publications
Reproducibility of Results
The statistical reproducibility of measurements (often in a clinical context), including the testing of instrumentation or techniques to obtain reproducible results. The concept includes reproducibility of physiological measurements, which may be used to develop rules to assess probability or prognosis, or response to a stimulus; reproducibility of occurrence of a condition; and reproducibility of experimental results.
Publication Bias
The influence of study results on the chances of publication and the tendency of investigators, reviewers, and editors to submit or accept manuscripts for publication based on the direction or strength of the study findings. Publication bias has an impact on the interpretation of clinical trials and meta-analyses. Bias can be minimized by insistence by editors on high-quality research, thorough literature reviews, acknowledgement of conflicts of interest, modification of peer review practices, etc.
Cost-Benefit Analysis
A method of comparing the cost of a program with its expected benefits in dollars (or other currency). The benefit-to-cost ratio is a measure of total return expected per unit of money spent. This analysis generally excludes consideration of factors that are not measured ultimately in economic terms. Cost effectiveness compares alternative ways to achieve a specific set of results.
Directories as Topic
Documentation
Medical Records Systems, Computerized
National Library of Medicine (U.S.)
An agency of the NATIONAL INSTITUTES OF HEALTH concerned with overall planning, promoting, and administering programs pertaining to advancement of medical and related sciences. Major activities of this institute include the collection, dissemination, and exchange of information important to the progress of medicine and health, research in medical informatics and support for medical library development.
Risk Factors
Natural Language Processing
Medical Record Linkage
Gene Library
Research Design
Metabolic Networks and Pathways
Meta-Analysis as Topic
A quantitative method of combining the results of independent studies (usually drawn from the published literature) and synthesizing summaries and conclusions which may be used to evaluate therapeutic effectiveness, plan new studies, etc., with application chiefly in the areas of research and medicine.
Bibliometrics
Pharmacoepidemiology
The science concerned with the benefit and risk of drugs used in populations and the analysis of the outcomes of drug therapies. Pharmacoepidemiologic data come from both clinical trials and epidemiological studies with emphasis on methods for the detection and evaluation of drug-related adverse effects, assessment of risk vs benefit ratios in drug therapy, patterns of drug utilization, the cost-effectiveness of specific drugs, methodology of postmarketing surveillance, and the relation between pharmacoepidemiology and the formulation and interpretation of regulatory guidelines. (Pharmacoepidemiol Drug Saf 1992;1(1); J Pharmacoepidemiol 1990;1(1))
Sequence Homology, Amino Acid
Genome, Human
Cluster Analysis
A set of statistical methods used to group variables or observations into strongly inter-related subgroups. In epidemiology, it may be used to analyze a closely grouped series of events or cases of disease or other health-related phenomenon with well-defined distribution patterns in relation to time or place or both.
Sequence Analysis
Chromosome Mapping
Artificial Intelligence
Subject Headings
Drug Information Services
Enzymes
Medical Informatics
Classification
Unified Medical Language System
A research and development program initiated by the NATIONAL LIBRARY OF MEDICINE to build knowledge sources for the purpose of aiding the development of systems that help health professionals retrieve and integrate biomedical information. The knowledge sources can be used to link disparate information systems to overcome retrieval problems caused by differences in terminology and the scattering of relevant information across many databases. The three knowledge sources are the Metathesaurus, the Semantic Network, and the Specialist Lexicon.
Informatics
MEDLARS
A computerized biomedical bibliographic storage and retrieval system operated by the NATIONAL LIBRARY OF MEDICINE. MEDLARS stands for Medical Literature Analysis and Retrieval System, which was first introduced in 1964 and evolved into an online system in 1971 called MEDLINE (MEDLARS Online). As other online databases were developed, MEDLARS became the name of the entire NLM information system while MEDLINE became the name of the premier database. MEDLARS was used to produce the former printed Cumulated Index Medicus, and the printed monthly Index Medicus, until that publication ceased in December 2004.
Data Collection
Sensitivity and Specificity
Molecular Biology
Evolution, Molecular
International Classification of Diseases
A system of categories to which morbid entries are assigned according to established criteria. Included is the entire range of conditions in a manageable number of categories, grouped to facilitate mortality reporting. It is produced by the World Health Organization (From ICD-10, p1). The Clinical Modifications, produced by the UNITED STATES DEPT. OF HEALTH AND HUMAN SERVICES, are larger extensions used for morbidity and general epidemiological purposes, primarily in the U.S.
Sequence Analysis, RNA
Dictionaries as Topic
Pattern Recognition, Automated
Oligonucleotide Array Sequence Analysis
Biomedical Research
Hypermedia
Computerized compilations of information units (text, sound, graphics, and/or video) interconnected by logical nonlinear linkages that enable users to follow optimal paths through the material and also the systems used to create and display this information. (From Thesaurus of ERIC Descriptors, 1994)
DNA, Complementary
Risk Assessment
Incidence
Human Genome Project
Outcome Assessment (Health Care)
Open Reading Frames
Publishing
Retrospective Studies
Studies used to test etiologic hypotheses in which inferences about an exposure to putative causal factors are derived from data relating to characteristics of persons under study or to events or experiences in their past. The essential feature is that some of the persons under study have the disease or outcome of interest and their characteristics are compared with those of unaffected persons.
Adverse Drug Reaction Reporting Systems
Data Interpretation, Statistical
Multigene Family
A set of genes descended by duplication and variation from some ancestral gene. Such genes may be clustered together on the same chromosome or dispersed on different chromosomes. Examples of multigene families include those that encode the hemoglobins, immunoglobulins, histocompatibility antigens, actins, tubulins, keratins, collagens, heat shock proteins, salivary glue proteins, chorion proteins, cuticle proteins, yolk proteins, and phaseolins, as well as histones, ribosomal RNA, and transfer RNA genes. The latter three are examples of reiterated genes, where hundreds of identical genes are present in a tandem array. (King & Stanfield, A Dictionary of Genetics, 4th ed)
Cohort Studies
Studies in which subsets of a defined population are identified. These groups may or may not be exposed to factors hypothesized to influence the probability of the occurrence of a particular disease or other outcome. Cohorts are defined populations which, as a whole, are followed in an attempt to determine distinguishing subgroup characteristics.
Sequence Homology
Technology Assessment, Biomedical
Controlled Clinical Trials as Topic
Works about clinical trials involving one or more test treatments, at least one control treatment, specified outcome measures for evaluating the studied intervention, and a bias-free method for assigning patients to the test treatment. The treatment may be drugs, devices, or procedures studied for diagnostic, therapeutic, or prophylactic effectiveness. Control measures include placebos, active medicines, no-treatment, dosage forms and regimens, historical comparisons, etc. When randomization using mathematical techniques, such as the use of a random numbers table, is employed to assign patients to test or control treatments, the trials are characterized as RANDOMIZED CONTROLLED TRIALS AS TOPIC.
Records as Topic
Disease
Biology
Conserved Sequence
Reference Books
Polymorphism, Single Nucleotide
Odds Ratio
The ratio of two odds. The exposure-odds ratio for case control data is the ratio of the odds in favor of exposure among cases to the odds in favor of exposure among noncases. The disease-odds ratio for a cohort or cross section is the ratio of the odds in favor of disease among the exposed to the odds in favor of disease among the unexposed. The prevalence-odds ratio refers to an odds ratio derived cross-sectionally from studies of prevalent cases.
Hospital Information Systems
Toxicology
Quality Control
Computer Simulation
Information Services
Computer Systems
Models, Statistical
Medical Informatics Computing
Quality-Adjusted Life Years
Workflow
Contig Mapping
Data Compression
Information application based on a variety of coding methods to minimize the amount of data to be stored, retrieved, or transmitted. Data compression can be applied to various forms of data, such as images and signals. It is used to reduce costs and increase efficiency in the maintenance of large volumes of data.
Clinical Coding
Registries
Transcriptome
Computer Security
Protective measures against unauthorized access to or interference with computer operating systems, telecommunications, or data structures, especially the modification, deletion, destruction, or release of data in computers. It includes methods of forestalling interference by computer viruses or so-called computer hackers aiming to compromise stored data.
Pharmaceutical Preparations
Canada
Forensic Genetics
Health Services Research
The integration of epidemiologic, sociological, economic, and other analytic sciences in the study of health services. Health services research is usually concerned with relationships between need, demand, supply, use, and outcome of health services. The aim of the research is evaluation, particularly in terms of structure, process, output, and outcome. (From Last, Dictionary of Epidemiology, 2d ed)
Catalogs as Topic
Neoplasms
Drug-Related Side Effects and Adverse Reactions
Data Display
Clinical Trials as Topic
Works about pre-planned studies of the safety, efficacy, or optimum dosage schedule (if appropriate) of one or more diagnostic, therapeutic, or prophylactic drugs, devices, or techniques selected according to predetermined criteria of eligibility and observed for predefined evidence of favorable and unfavorable effects. This concept includes clinical trials conducted both in the U.S. and in other countries.
Models, Economic
Prevalence
Metabolomics
Sequence Homology, Nucleic Acid
Metabolism
United States Department of Veterans Affairs
Genetic Diseases, Inborn
Species Specificity
The restriction of a characteristic behavior, anatomical structure or physical system, such as immune response; metabolic response, or gene or gene variant to the members of one species. It refers to that property which differentiates one species from another but it is also used for phylogenetic levels higher or lower than the species.
Research
Critical and exhaustive investigation or experimentation, having for its aim the discovery of new facts and their correct interpretation, the revision of accepted conclusions, theories, or laws in the light of newly discovered facts, or the practical application of such new or revised conclusions, theories, or laws. (Webster, 3d ed)
High-Throughput Nucleotide Sequencing
Techniques of nucleotide sequence analysis that increase the range, complexity, sensitivity, and accuracy of results by greatly increasing the scale of operations and thus the number of nucleotides, and the number of copies of each nucleotide sequenced. The sequencing may be done by analysis of the synthesis or ligation products, hybridization to preexisting sequences, etc.
Models, Theoretical
Markov Chains
Cloning, Molecular
Protein Structure, Tertiary
The level of protein structure in which combinations of secondary protein structures (alpha helices, beta sheets, loop regions, and motifs) pack together to form folded shapes called domains. Disulfide bridges between cysteines in two different parts of the polypeptide chain along with other interactions between the chains play a role in the formation and stabilization of tertiary structure. Small proteins usually consist of only one domain but larger proteins may contain a number of domains connected by segments of polypeptide chain which lack regular secondary structure.
Models, Molecular
Models, Genetic
Protein Interaction Maps
Bias (Epidemiology)
Any deviation of results or inferences from the truth, or processes leading to such deviation. Bias can result from several sources: one-sided or systematic variations in measurement from the true value (systematic error); flaws in study design; deviation of inferences, interpretations, or analyses based on flawed data or data collection; etc. There is no sense of prejudice or subjectivity implied in the assessment of bias under these conditions.
Internationality
Names
Personal names, given or surname, as cultural characteristics, as ethnological or religious patterns, as indications of the geographic distribution of families and inbreeding, etc. Analysis of isonymy, the quality of having the same or similar names, is useful in the study of population genetics. NAMES is used also for the history of names or name changes of corporate bodies, such as medical societies, universities, hospitals, government agencies, etc.
Pregnancy
Epidemiologic Studies
Medical Informatics Applications
Structural Homology, Protein
Genetic Predisposition to Disease
Gene Regulatory Networks
Interacting DNA-encoded regulatory subsystems in the GENOME that coordinate input from activator and repressor TRANSCRIPTION FACTORS during development, cell differentiation, or in response to environmental cues. The networks function to ultimately specify expression of particular sets of GENES for specific conditions, times, or locations.
Case-Control Studies
Studies which start with the identification of persons with a disease of interest and a control (comparison, referent) group without the disease. The relationship of an attribute to the disease is examined by comparing diseased and non-diseased persons with regard to the frequency or levels of the attribute in each group.
Quebec
A province of eastern Canada. Its capital is Quebec. The region belonged to France from 1627 to 1763 when it was lost to the British. The name is from the Algonquian quilibek meaning the place where waters narrow, referring to the gradually narrowing channel of the St. Lawrence or to the narrows of the river at Cape Diamond. (From Webster's New Geographical Dictionary, 1988, p993 & Room, Brewer's Dictionary of Names, 1992, p440)
Government Publications as Topic
Bayes Theorem
A theorem in probability theory named for Thomas Bayes (1702-1761). In epidemiology, it is used to obtain the probability of disease in a group of people with some characteristic on the basis of the overall rate of that disease and of the likelihood of that characteristic in healthy and diseased individuals. The most familiar application is in clinical decision analysis where it is used for estimating the probability of a particular diagnosis given the appearance of some symptoms or test result.
Automation
Ontario
A province of Canada lying between the provinces of Manitoba and Quebec. Its capital is Toronto. It takes its name from Lake Ontario which is said to represent the Iroquois oniatariio, beautiful lake. (From Webster's New Geographical Dictionary, 1988, p892 & Room, Brewer's Dictionary of Names, 1992, p391)
Access to Information
Mutation
Forecasting
Electronic Health Records
Media that facilitate transportability of pertinent information concerning patient's illness across varied providers and geographic locations. Some versions include direct linkages to online consumer health information that is relevant to the health conditions and treatments related to a specific patient.
Mass Spectrometry
Age Factors
Age as a constituent element or influence contributing to the production of a result. It may be applicable to the cause or the effect of a circumstance. It is used with human or animal concepts but should be differentiated from AGING, a physiological process, and TIME FACTORS which refers only to the passage of time.
Observational Study as Topic
Forms and Records Control
Genes
Relatedness of baculovirus and gypsy retrotransposon envelope proteins. (1/7499)
BACKGROUND: Current evidence suggests that lepidopteran baculoviruses may be divided into two phylogenetic groups based on their envelope fusion proteins. One group utilizes gp64, a low pH-dependent envelope fusion protein, whereas the other employs a protein family (e.g. LD130 in the Lymantria dispar nucleopolyhedrovirus) unrelated to gp64, but that is also low pH-dependent. Database searches with members of the LD130 protein family often record significant levels of homology to envelope proteins from a number of insect retrovirus-like transposable elements of the gypsy class. In this report, the significance of the homology between these two types of envelope proteins is analyzed. RESULTS: The significance of the alignment scores was evaluated using Z-scores that were calculated by comparing the observed alignment score to the distribution of scores obtained for alignments after one of the sequences was subjected to 100 random shuffles of its sequence. These analyses resulted in Z-scores of >9 for members of the LD130 family when compared to most gypsy envelope proteins. Furthermore, in addition to significant levels of sequence homology and the presence of predicted signal sequences and transmembrane domains, members of this family contain a possible a furin cleavage motif, a conserved motif downstream of this site, predicted coiled-coil domains, and a pattern of conserved cysteine residues. CONCLUSIONS: These analyses provide a link between envelope proteins from a group of insect retrovirus-like elements and a baculovirus protein family that includes low-pH-dependent envelope fusion proteins. The ability of gypsy retroelements to transpose from insect into baculovirus genomes suggests a pathway for the exchange of this protein between these viral families. (+info)Cultural aspects of cancer genetics: setting a research agenda. (2/7499)
BACKGROUND: Anecdotal evidence suggests that people from non-Anglo-Celtic backgrounds are under-represented at familial cancer clinics in the UK, the USA, and Australia. This article discusses cultural beliefs as a potential key barrier to access, reviews previous empirical research on cultural aspects of cancer genetics, draws implications from findings, and sets a research agenda on the inter-relationships between culture, cancer genetics, and kinship. METHODS: The CD-ROM databases MEDLINE, PsychLIT, CINAHL, and Sociological Abstracts were searched from 1980 onwards. RESULTS: Cultural aspects of cancer genetics is the focus of an emerging body of publications. Almost all studies assessed African-American women with a family history of breast cancer and few studies included more diverse samples, such as Americans of Ashkenazi Jewish background or Hawaiian- and Japanese-Americans. Our analysis of published reports suggests several directions for future research. First, an increased focus on various Asian societies appears warranted. Research outside North America could explore the extent to which findings can be replicated in other multicultural settings. In addition, control group designs are likely to benefit from systematically assessing culture based beliefs and cultural identity in the "majority culture" group used for comparative purposes. CONCLUSION: More data on which to base the provision of culturally appropriate familial cancer clinic services to ethnically diverse societies are needed. Empirical data will assist with culturally appropriate categorisation of people from other cultures into risk groups based on their family histories and provide the basis for the development of culturally appropriate patient education strategies and materials. (+info)An efficient algorithm for finding short approximate non-tandem repeats. (3/7499)
We study the problem of approximate non-tandem repeat extraction. Given a long subject string S of length N over a finite alphabet Sigma and a threshold D, we would like to find all short substrings of S of length P that repeat with at most D differences, i.e., insertions, deletions, and mismatches. We give a careful theoretical characterization of the set of seeds (i.e., some maximal exact repeats) required by the algorithm, and prove a sublinear bound on their expected numbers. Using this result, we present a sub-quadratic algorithm for finding all short (i.e., of length O(log N)) approximate repeats. The running time of our algorithm is O(DN(3pow(epsilon)-1)log N), where epsilon = D/P and pow(epsilon) is an increasing, concave function that is 0 when epsilon = 0 and about 0.9 for DNA and protein sequences. (+info)Fast optimal leaf ordering for hierarchical clustering. (4/7499)
We present the first practical algorithm for the optimal linear leaf ordering of trees that are generated by hierarchical clustering. Hierarchical clustering has been extensively used to analyze gene expression data, and we show how optimal leaf ordering can reveal biological structure that is not observed with an existing heuristic ordering method. For a tree with n leaves, there are 2(n-1) linear orderings consistent with the structure of the tree. Our optimal leaf ordering algorithm runs in time O(n(4)), and we present further improvements that make the running time of our algorithm practical. (+info)GEST: a gene expression search tool based on a novel Bayesian similarity metric. (5/7499)
Gene expression array technology has made possible the assay of expression levels of tens of thousands of genes at a time; large databases of such measurements are currently under construction. One important use of such databases is the ability to search for experiments that have similar gene expression levels as a query, potentially identifying previously unsuspected relationships among cellular states. Such searches depend crucially on the metric used to assess the similarity between pairs of experiments. The complex joint distribution of gene expression levels, particularly their correlational structure and non-normality, make simple similarity metrics such as Euclidean distance or correlational similarity scores suboptimal for use in this application. We present a similarity metric for gene expression array experiments that takes into account the complex joint distribution of expression values. We provide a computationally tractable approximation to this measure, and have implemented a database search tool based on it. We discuss implementation issues and efficiency, and we compare our new metric to other standard metrics. (+info)New approaches for reconstructing phylogenies from gene order data. (6/7499)
We report on new techniques we have developed for reconstructing phylogenies on whole genomes. Our mathematical techniques include new polynomial-time methods for bounding the inversion length of a candidate tree and new polynomial-time methods for estimating genomic distances which greatly improve the accuracy of neighbor-joining analyses. We demonstrate the power of these techniques through an extensive performance study based on simulating genome evolution under a wide range of model conditions. Combining these new tools with standard approaches (fast reconstruction with neighbor-joining, exploration of all possible refinements of strict consensus trees, etc.) has allowed us to analyze datasets that were previously considered computationally impractical. In particular, we have conducted a complete phylogenetic analysis of a subset of the Campanulaceae family, confirming various conjectures about the relationships among members of the subset and about the principal mechanism of evolution for their chloroplast genome. We give representative results of the extensive experimentation we conducted on both real and simulated datasets in order to validate and characterize our approaches. We find that our techniques provide very accurate reconstructions of the true tree topology even when the data are generated by processes that include a significant fraction of transpositions and when the data are close to saturation. (+info)Designing fast converging phylogenetic methods. (7/7499)
Absolute fast converging phylogenetic reconstruction methods are provably guaranteed to recover the true tree with high probability from sequences that grow only polynomially in the number of leaves, once the edge lengths are bounded arbitrarily from above and below. Only a few methods have been determined to be absolute fast converging; these have all been developed in just the last few years, and most are polynomial time. In this paper, we compare pre-existing fast converging methods as well as some new polynomial time methods that we have developed. Our study, based upon simulating evolution under a wide range of model conditions, establishes that our new methods outperform both neighbor joining and the previous fast converging methods, returning very accurate large trees, when these other methods do poorly. (+info)Inferring subnetworks from perturbed expression profiles. (8/7499)
Genome-wide expression profiles of genetic mutants provide a wide variety of measurements of cellular responses to perturbations. Typical analysis of such data identifies genes affected by perturbation and uses clustering to group genes of similar function. In this paper we discover a finer structure of interactions between genes, such as causality, mediation, activation, and inhibition by using a Bayesian network framework. We extend this framework to correctly handle perturbations, and to identify significant subnetworks of interacting genes. We apply this method to expression data of S. cerevisiae mutants and uncover a variety of structured metabolic, signaling and regulatory pathways. (+info)
Third parties interests in population genetic databases : some comparative notes regarding the law in Estonia, Iceland, Sweden...
770 full-length cDNAs. Analysis of the mouse transcriptome based on functional annotation of 60 | [email protected]
GXD: a gene expression database for the laboratory mouse. The Gene Ex by M Ringwald, M E. Mangan et al.
A Blueprint for Drug/Diagnostic Development: Expansion and Use of Curated Genetic Databases - The ASCO Post
Analysis of the mouse transcriptome for genes involved in the function of the nervous system<...
ZFIN Publication: Dahdul et al., 2010
Zebrafish Model Organism Database
August | 2018 | UCSC Genome Browser Blog
Difference between revisions of GMOD Evo Hackathon Proposal - GMOD
Gene Catalog of Microbes That Call the Vagina Home
Lessons | INCF TrainingSpace
Lessons | INCF TrainingSpace
Yeast Genome Analysis from the BMERC
ssr2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog
map3k7 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog
Mining cancer gene expression databases for latent information on intronic microRNAs<...
UCSC Genome Browser: Publications
Transcript annotation in FANTOM3: Mouse gene catalog based on physical cDNAs<...
The UCSC Genome Browser database: 2014 update. - PubMed - NCBI
The UCSC Genome Browser Database: update 2006. - PubMed - NCBI
Prospective pathway signaling and prognostic values of MicroRNA-9 in ovarian cancer based on gene expression omnibus (GEO): a...
HCOP: Orthology Predictions Search | HUGO Gene Nomenclature Committee
HCOP: Orthology Predictions Search | HUGO Gene Nomenclature Committee
Guidance for updating deprecated Annotation Extension Relations - GO Wiki
Procedure for migration of protein annotations to Protein2GO - GO Wiki
Genomics | From Nucleotides to Networks
The mouse genome database (MGD): new features facilitating a model sys by J T. Eppig, J A. Blake et al.
View source for Leflunomide - Xenbase
David Haussler
Acrylamide
Gordons Notes: How good are the FBIs genetic test matches?
Topgo r
November 2007 GMOD Meeting - GMOD
RiceGE: Rice Functional Genomic Express Database
RiceGE: Rice Functional Genomic Express Database
Gohelp] GOOSE SQL query
Compare GO annotations related to Craniofacial-deafness-hand syndrome using OMIM genes and OrthoDisease orthologs
Difference between revisions of Gene Ontology - WormBaseWiki
Representation and depiction of phenotype information a | Open-i
DAVID: Database for Annotation, Visualization, and Integrated Discovery | Genome Biology | Full Text
Public Sessions
Public Sessions
Anatomic Gene Expression Atlas (AGEA)
Can subtle changes in gene expression be consistently detected with different microarray platforms? | BMC Genomics | Full Text
Anatomic Gene Expression Atlas (AGEA)
Ensembl genome browser 67: Homo sapiens - Description
March | 2015 | UCSC Genome Browser Blog
ParkDB: A Parkinsons disease gene expression database<...
Intranet - IMP/IMBA - Bioinformatics
Intranet - IMP/IMBA - Bioinformatics
BLAST | Basic local alignment search tool - OMICtools
Using gene expression databases for classical trait QTL candidate gene discovery in the BXD recombinant inbred genetic...
Arabidopsis Cyclome Expression Database
Circadian and CLOCK-controlled regulation of the mouse transcriptome and cell proliferation
929394 - Construction of Decision Trees Based on Gene Expression Omnibus Data to Classify Bladder Cancer and Its Subtypes -...
Home | butterfly2
IARC Monographs - Monographs available in PDF format
IARC Monographs - Monographs available in PDF format
MaizeGDB becomes sequence-centric by Taner Z. Sen, Carson M. Andorf et al.
Promoter (genetics) - Wikipedia
Editorial: Plant and cell physiologys 2016 online database issue<...
Generic Model Organism Database Project / Mailing Lists
Arabidopsis] Job Opening: Plant Ontology Project Coordinator
Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments
Project Beta Cell Genomics database | NCBO BioPortal
Genetic codes (database)
Genetic codes is a simple ASN.1 database hosted by the National Center for Biotechnology Information and listing all the known ... Genetic code Galperin, Michael Y; Cochrane Guy R (Jan 2011). "The 2011 Nucleic Acids Research Database Issue and the online ... Biological databases, Molecular genetics, Gene expression, Protein biosynthesis, All stub articles, Biological database stubs) ... Molecular Biology Database Collection". Nucleic Acids Res. England. 39 (Database issue): D1-6. doi:10.1093/nar/gkq1243. PMC ...
Indian Genetic Disease Database
... (IGDD) is the first patient-based genetic disease database in India. It is developed and ... Genetic diseases and disorders, Biological databases, Databases in India, Diseases and disorders in India, Medical databases). ... This database keeps track of mutations in the causal genes for that genetic diseases common in India. The database will be ... "Indian genetic disease database". Nucleic Acids Res. England. 39 (Database issue): D933-8. doi:10.1093/nar/gkq1025. PMC 3013653 ...
Gypsy (database)
Gypsy (GyDB) is a wiki-style database of mobile genetic elements. Classification of mobile genetic elements Horizontal gene ... "The Gypsy Database (GyDB) of mobile genetic elements: release 2.0". Nucleic Acids Res. England. 39 (Database issue): D70-4. doi ... Lloréns, C; Futami, R; Bezemer, D; Moya, A (January 2008). "The Gypsy Database (GyDB) of mobile genetic elements". Nucleic ... v t e (Articles with short description, Short description is different from Wikidata, Biological databases, Mobile genetic ...
VISTA (comparative genomics)
35 (Database issue): D88-92. doi:10.1093/nar/gkl822. PMC 1716724. PMID 17130149. (Genetic mapping, Genome databases). ... A database of tissue-specific human enhancers is available through VISTA Enhancer Browser. GenomeVISTA allows the comparison of ... VISTA is a collection of databases, tools, and servers that permit extensive comparative genomics analyses. The VISTA family of ... not limited by the species collection already in the database) There are more than 28 searchable genomes, including vertebrate ...
Islander (database)
Islander is a database of integrative islands in prokaryotic genomes. Mobile genetic elements Mantri, Yogita; Williams Kelly P ... Biological databases, All stub articles, Biological database stubs). ... Jan 2004). "Islander: a database of integrative islands in prokaryotic genomes, the associated integrases and their DNA site ... 32 (Database issue): D55-8. doi:10.1093/nar/gkh059. PMC 308793. PMID 14681358. http://www.indiana.edu/~islander #BrokenLink v t ...
Atropa belladonna
Beltsville, Maryland: National Germplasm Resources Laboratory; USDA, ARS, National Genetic Resources Program. Archived from the ... "Compounds in deadly nightshade". Phytochemical and Ethnobotanical Databases. ...
Monroe (avocado)
"Variety Database". Avocadosource.com. Retrieved 2014-08-25. "MIA 19852 - Persea americana - Monroe". USDA, ARS, National ... Genetic Resources Program. Germplasm Resources Information Network - (GRIN). [Online Database] National Germplasm Resources ... "MIA 35743 - Persea americana - Monroe - Florida, United States". USDA, ARS, National Genetic Resources Program. Germplasm ... Resources Information Network - (GRIN). [Online Database] National Germplasm Resources Laboratory. 2002-08-29. Retrieved 2014- ...
Tropane
"Cocaine content of plants". USDA, ARS, National Genetic Resources Program. Phytochemical and Ethnobotanical Databases. [Online ... "Atropine content of plants". USDA, ARS, National Genetic Resources Program. Phytochemical and Ethnobotanical Databases. [Online ... Database] National Germplasm Resources Laboratory, Beltsville, Maryland. Archived from the original on November 7, 2004. ... Database] National Germplasm Resources Laboratory, Beltsville, Maryland. Archived from the original on November 7, 2004. ...
Hygrine
"USDA, ARS, National Genetic Resources Program. Phytochemical and Ethnobotanical Databases. National Germplasm Resources ...
SoyBase Database
... the database concentrated on genetic information such as genetic linkage maps and other Mendalian information. SoyBase genetic ... SoyBase genetic linkage maps were integral to the assembly of the soybean genome. In 2018 the database received approximately ... SoyBase is a database created by the United States Department of Agriculture. It contains genetic information about soybeans. ... Results display soybean genetic (and genomic) data using Generic Model Organism Database (GMOD) open-source software. In ...
SNP array
Barnes, Michael R. (2003). "Human Genetic Variation: Databases and Concepts". In Barnes, Michael R.; Gray, Ian C. (eds.). ... SNP-based genetic linkage analysis can be used to map disease loci, and determine disease susceptibility genes in individuals. ... The combination of SNP maps and high density SNP arrays allows SNPs to be used as markers for genetic diseases that have ... SNPs can also be used to study genetic abnormalities in cancer. For example, SNP arrays can be used to study loss of ...
Genetic privacy
DNA database § Privacy issues Genetic discrimination Genetic exceptionalism Gene theft Maryland v. King List of data breaches ... to make genetic inferences. As genetic databases grow at unprecedented rates, providing larger and more comprehensive ... ISBN 9781107076075 Genetic Information Privacy, EFF Medical and Genetic Privacy, ACLU Genetic Privacy Laws, NCSL (Articles with ... A study conducted in 2013 revealed vulnerabilities in the security of public databases that contain genetic data. As a result, ...
Personal genomics
Check Hayden, Erika (2013). "Privacy loophole found in genetic databases". Nature. doi:10.1038/nature.2013.12237. S2CID ... Genetic non-discrimination laws have been enacted in some US states and at the federal level, by the Genetic Information ... genetic genealogy and public-records databases." This has led to calls for policy-makers to establish consistent guidelines and ... Hiding or perplexing genetic information by a computational method Elective genetic and genomic testing "NCI Dictionary of ...
Candida (fungus)
"CGD Help: Non-standard Genetic Codes". Candida Genome Database. Retrieved 1 May 2015. Santos, Manuel A. S.; Ueda, Takuya; ... Watanabe, Kimitsuna; Tuite, Mick F. (31 October 2003). "The non-standard genetic code of Candida spp.: an evolving genetic code ... This novel genetic code may be a mechanism for more rapid adaptation to the organism's environment, as well as playing an ... 2015). Some species of Candida use a non-standard genetic code in the translation of their nuclear genes into the amino acid ...
Genetic studies on Arabs
... databases Database for B thalassemia in Arabs Israeli National genetic bank contains genetic mutations of Arabs Teebi database ... "CTGA: The Database for Genetic Disorders in Arabs" (PDF). Archived from the original (PDF) on 8 March 2014. "Genetic Diseases ... DNA history of Egypt Genetic history of the Middle East Genetic history of North Africa Genetic studies on Jews Genetic studies ... database for genetic disorders in Arab populations. At present, the CTGA database is centrally maintained in Dubai, and hosts ...
Candida albicans
Tyers M. "BioGRID - Database of Protein, Chemical, and Genetic Interactions". thebiogrid.org. Subotić A, Swinnen E, Demuyser L ... Non-standard Genetic Codes". Candida Genome Database. Retrieved 30 October 2011. Andrzej (Anjay) Elzanowski and Jim Ostell (7 ... Candida Genome Database U.S. National Institutes of Health on the Candida albicans genome Mycobank data on Candida albicans ... This is an unusual example of a departure from the standard genetic code, and most such departures are in start codons or, for ...
Prunus pleuradenia
Genetic Resources and Crop Evolution. 59 (5): 655-681. doi:10.1007/s10722-011-9709-2. S2CID 14101302. "USDA Plants Database". v ...
Richard Patrick
Richard contributed guitar to the soundtrack of the 2008 film Repo! The Genetic Opera. Richard is friends with Lacey Mosley, ... "I Melt With You" (2011): Soundtracks". Internet Movie Database. "Birthday: Richard Patrick". "Richard Patrick: Why I Quit Nine ...
Rs6313
"Genetic variations in the serotonin 5-HT2A receptor gene (HTR2A) are associated with rheumatoid arthritis". Ann Rheum Dis. 67 ( ... The PDGene Database. The Michael J. Fox Foundation for Parkinson's Research. Archived from the original on 2011-07-27. ... neuropsychological and molecular-genetic study". NOVA Science: 70-87.{{cite journal}}: CS1 maint: multiple names: authors list ... "Replication validity of genetic association studies". Nature Genetics. 29 (3): 306-309. doi:10.1038/ng749. PMID 11600885. S2CID ...
Germaine olive
Retrieved 2009-01-20.[permanent dead link] "Detailed information for cultivar: Germaine". Seed and Plant Genetic Resources ... ISBN 2-84038-635-6. "Cultivar name: Germaine". OLEA Databases. Retrieved 2009-01-20. "Germaine" (PDF). International Olive ...
Bosana
"Detailed information for cultivar: Bosana". Seed and Plant Genetic Resources Service - AGPS. 2005. Retrieved 2009-01-13. (CS1 ... "Cultivar name: Bosana". OLEA Databases. Retrieved 2009-01-14. "Bosana" (PDF) (in Spanish). International Olive Council. ... "Agronomical characters for cultivar Bosana". OLEA Databases. Retrieved 2009-01-14. " ...
Embarrassingly parallel
Genetic algorithms. Ensemble calculations of numerical weather prediction. Event simulation and reconstruction in particle ... BLAST searches in bioinformatics with split databases. Large scale facial recognition systems that compare thousands of ... Mathog, DR (22 September 2003). "Parallel BLAST on split databases". Bioinformatics. 19 (14): 1865-6. doi:10.1093/ ... Monte Carlo analysis Distributed relational database queries using distributed set processing. Numerical integration Serving ...
Genome mining
Genetic data has been accumulated in databases. Researchers are able to utilize algorithms to decipher the data accessible from ... As large quantities of genomic sequence data began to accumulate in public databases, genetic algorithms became important to ... The following are databases and tools: GenBank database provides genomic datasets for analysis. UCSC Genome Browser AntiSMASH- ... BIG-FAM is a biosynthetic gene cluster family database. DoBISCUIT is a database of secondary metabolite biosynthetic gene ...
Condylostoma nuclear code
List of all genetic codes: translation tables 1 to 16, and 21 to 31. The genetic codes database. This article incorporates text ... The Condylostoma nuclear code (translation table 28) is a genetic code used by the nuclear genome of the heterotrich ciliate ... Elzanowski A, Ostell J, Leipe D, Soussov V. "The Genetic Codes". Taxonomy browser. National Center for Biotechnology ... "Novel Ciliate Genetic Code Variants Including the Reassignment of All Three Stop Codons to Sense Codons in Condylostoma magnum ...
List of domesticated animals from Hungary
EAAP Animal Genetic Database. Retrieved 27 April 2016. Kohl, Wilhelm; Toth, Peter (2014). The Mangalitsa Pig: Royalty is Coming ...
Blastocrithidia nuclear code
List of all genetic codes: translation tables 1 to 16, and 21 to 33. The genetic codes database. This article incorporates text ... The Blastocrithidia nuclear code (translation table 31) is a genetic code used by the nuclear genome of the trypanosomatid ... Elzanowski A, Ostell J, Leipe D, Soussov V. "The Genetic Codes". Taxonomy browser. National Center for Biotechnology ... "An Unprecedented Non-canonical Nuclear Genetic Code with All Three Termination Codons Reassigned as Sense Codons". Current ...
Peritrich nuclear code
List of all genetic codes: translation tables 1 to 16, and 21 to 31. The genetic codes database. This article incorporates text ... The peritrich nuclear code (translation table 30) is a genetic code used by the nuclear genome of the peritrich ciliates ... Elzanowski A, Ostell J, Leipe D, Soussov V. "The Genetic Codes". Taxonomy browser. National Center for Biotechnology ... Sánchez-Silva, Rocı́o; Villalobo, Eduardo; Morin, Loı̈c; Torres, Antonio (2003). "A New Noncanonical Nuclear Genetic Code". ...
Ransoniella punctata
Cowrie Genetic Database Project. 2005. Media related to Ransoniella punctata at Wikimedia Commons (Articles with short ...
Karyorelict nuclear code
List of all genetic codes: translation tables 1 to 16, and 21 to 31. The genetic codes database. This article incorporates text ... The karyorelictid nuclear code (translation table 27) is a genetic code used by the nuclear genome of the Karyorelictea ciliate ... Elzanowski A, Ostell J, Leipe D, Soussov V. "The Genetic Codes". Taxonomy browser. National Center for Biotechnology ... Swart, Estienne Carl; Serra, Valentina; Petroni, Giulio; Nowacki, Mariusz (2016). "Genetic Codes with No Dedicated Stop Codon: ...
CEFIP
"BioGRID , Database of Protein, Chemical, and Genetic Interactions". thebiogrid.org. Retrieved 2017-05-07. Database, GeneCards ... "GeneCards - Human Genes , Gene Database , Gene Search". www.genecards.org. Retrieved 2017-05-07. Database, GeneCards Human Gene ... "HGNC database of human gene names , HUGO Gene Nomenclature Committee". www.genenames.org. Retrieved 2017-05-07. "Home - UniGene ... Database, GeneCards Human Gene. "TBX4 Gene - GeneCards , TBX4 Protein , TBX4 Antibody". www.genecards.org. Retrieved 2017-05-09 ...
Paul Mischel
"Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer". cgap.nci.nih.gov. Retrieved 2018-11-27. Nathanson, ... "Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity". Nature. 543 (7643): 122-125. ... ". "Faculty Database Production Server , David Geffen School of Medicine at UCLA". people.healthsciences.ucla.edu. Retrieved ...
Phage display
Databases and computational tools for mimotopes have been an important part of phage display study. Databases, programs and web ... Many genetic sequences are expressed in a bacteriophage library in the form of fusions with the bacteriophage coat protein, so ... Huang J, Ru B, Zhu P, Nie F, Yang J, Wang X, Dai P, Lin H, Guo FB, Rao N (January 2012). "MimoDB 2.0: a mimotope database and ... 40 (Database issue): D271-7. doi:10.1093/nar/gkr922. PMC 3245166. PMID 22053087. Negi SS, Braun W (2009). "Automated Detection ...
List of birds of New Zealand
When the endemic E. minor population declined in New Zealand, it left a genetic opening for E. novaehollandiae. The decrease of ... not intended to be a complete database of the birds of New Zealand). TerraNature New Zealand native birds list. (Articles with ...
Cervical cancer
Genetic factors also contribute to cervical cancer risk. Cervical cancer typically develops from precancerous changes over 10 ... The Cochrane Database of Systematic Reviews. 2021 (9): CD002834. doi:10.1002/14651858.CD002834.pub3. ISSN 1469-493X. PMC ... The Cochrane Database of Systematic Reviews. 2022 (3): CD008239. doi:10.1002/14651858.CD008239.pub5. ISSN 1469-493X. PMC ... The Cochrane Database of Systematic Reviews. 5 (5): CD007583. doi:10.1002/14651858.cd007583.pub3. PMC 4171000. PMID 22592722. ...
Obstetric ultrasonography
Whitworth, M; Bricker, L; Mullan, C (2015). "Ultrasound for fetal assessment in early pregnancy". Cochrane Database of ... the ISUOG recommends that pregnant patients who desire genetic testing have obstetric ultrasounds between 11 weeks' and 13 ...
Norovirus
Vinjé J, Green J, Lewis DC, Gallimore CI, Brown DW, Koopmans MP (2000). "Genetic polymorphism across regions of the three open ... In: ICTVdB-The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA "2011 ICTV ... Norovirus (vomiting bug) NHS Norovirus infections Global network and database noroviruses CDC Viral Gastroenteritis FAQs: ... which can be further divided into different genetic clusters or genotypes. Noroviruses commonly isolated in cases of acute ...
AMN
... movie and game database company acquired by RhythmOne Afghanistan Mission Network, a coalition network for NATO led missions in ... a rare X-linked genetic disease AMN (TV station), in Griffith, New South Wales, Australia Access Media Network, a ...
Baum-Welch algorithm
GENSCAN was shown to exactly predict exon location with 90% accuracy with 80% specificity compared to an annotated database. ... and in particular genetic information. They have since become an important tool in the probabilistic modeling of genomic ...
Sequence motif
An example of a PFM from the TRANSFAC database for the transcription factor AP-1: The first column specifies the position, the ... and genetic diversity. Curr Protoc Protein Sci. Vol. chapter 2. pp. 2.12.1-2.12.14. doi:10.1002/0471140864.ps0212s48. ISBN 978- ... A similar approach is commonly used by modern protein domain databases such as Pfam: human curators would select a pool of ... Within a sequence or database of sequences, researchers search and find motifs using computer-based techniques of sequence ...
Candida blankii
cite book}}: ,first2= has generic name (help) "Yeast Species Database". Retrieved 2010-12-24. S. Zaragoza; L. Galanternik; M. ... Different strains, it was suggested, should also be studied "to increase knowledge of genetic diversity and antifungal ...
Flavr Savr
Through genetic engineering, Calgene hoped to slow down the ripening process of the tomato and thus prevent it from softening ... "GM Crop Database:Tomato". International Life Sciences Institute. Archived from the original on July 25, 2011.{{cite web}}: CS1 ... The harmful, parasitic genetic material was removed from the bacterial T-plasmid and was replaced by the favored genes. The ... Because some members of the public were misinformed on genetic technology, people feared the Flavr Savr and other genetically ...
Sam Beckett
The explanation was that the simo-leap with Al had left Sam with enough of Al's genetic coding that he could leap back past his ... with access to vast historical databases, the project's funds were running thin. Eager to prove his theories, Sam prematurely ... In the fifth-season episode "Trilogy (Part 2)," Sam fathers a child who proves to be his true genetic child, not the child of ... the explanation was that Sam's close genetic link with his ancestor allowed him to do this. This was also partly due to an " ...
Halobacterium salinarum
A sample of encapsulated inments from a close genetic relative of H. salinarum is estimated to be 121 million years old[ ... Kozlowski, LP (26 October 2016). "Proteome-pI: proteome isoelectric point database". Nucleic Acids Research. 45 (D1): D1112- ... Scientists have previously recovered similar genetic material from the Michigan Basin,[clarification needed] the same region ...
Metabolism
Databases Flow Chart of Metabolic Pathways at ExPASy IUBMB-Nicholson Metabolic Pathways Chart SuperCYP: Database for Drug- ... These genetic modifications usually aim to reduce the amount of energy used to produce the product, increase yields and reduce ... Database of biological pathways KEGG - Collection of bioinformatics databases Friedrich C (1998). Physiology and genetics of ... Nucleic acids are critical for the storage and use of genetic information, and its interpretation through the processes of ...
Steven D. Wexner
Jeroen Baas; Boyack, Kevin; Ioannidis, John P. A. (2021). "August 2021 data-update for "Updated science-wide author databases ... due to genetic drift as well as environmental and dietary factors. This is often misdiagnosed until the disease has become ... Elsevier published a list of the top cited scientists from 22 different fields based on the Scopus database. In the field of ...
Genomic imprinting
The first imprinted genetic disorders to be described in humans were the reciprocally inherited Prader-Willi syndrome and ... geneimprint.com Imprinted Gene and Parent-of-origin Effect Database J. Kimball's Imprinted Genes Site Genomic+imprinting at the ... A hypothesis for the origin of this genetic variation states that the host-defense system responsible for silencing foreign DNA ... It is an epigenetic process that involves DNA methylation and histone methylation without altering the genetic sequence. These ...
Indian python
A genetic study published in 2017 showed that the Burmese pythons in Florida are hybrids with P. molurus. In the literature, ... Python molurus at the Reptarium.cz Reptile Database. Accessed 13 September 2007. Indian Python at Ecology Asia. Accessed 13 ...
Genome size
Animal Genome Size Database Plant DNA C-values Database Fungal Genome Size Database Fungal Database Archived 2008-03-10 at the ... As much as 90% of the genetic material can be lost when a species makes the evolutionary transition from a free-living to an ... Animal Genome Size Database Bacterial genome size C-value Cell nucleus Comparative genomics Comparison of different genome ... This process seems to be dominated by genetic drift resulting from small population size, low recombination rates, and high ...
Alloxylon flammeum
Furthermore, plants in cultivation are likely to come from a limited genetic pool. With under 2% of its original extent ... IBIS database. Canberra, Australian Capital Territory: Centre for Plant Biodiversity Research, Australian Government. Retrieved ... Species Profile and Threats Database. Canberra, Australian Capital Territory: Commonwealth of Australia. Retrieved 14 December ...
Interferon
37 (Database issue): D852-7. doi:10.1093/nar/gkn732. PMC 2686605. PMID 18996892. Xu GP, Zhang ZL, Xiao S, Zhuang LK, Xia D, Zou ... However, virus-encoded genetic elements have the ability to antagonize the IFN response contributing to viral pathogenesis and ... A collection of known ISGs is available on Interferome, a curated online database of ISGs (www.interferome.org); Additionally, ... Samarajiwa SA, Forster S, Auchettl K, Hertzog PJ (January 2009). "INTERFEROME: the database of interferon regulated genes". ...
Cornelia Ulrich
... in AcademiaNet, a database of scientists in Germany Cornelia Ulrich at Huntsman Cancer Institute DKFZ Executive ... and genetic testing." (Mentors: John D. Potter, Stephen Schwartz) 1991/92: Fulbright Scholarship and Fulbright Professional ... "Association of aspirin and non-steroidal anti-inflammatory drug use with risk of colorectal cancer according to genetic ...
Sulfolobus
also showed that UV-irradiation increased the frequency of recombination due to genetic exchange in S. acidocaldarius. Frols et ... "GTDB release 05-RS95". Genome Taxonomy Database. Parks, DH; Chuvochina, M; Chaumeil, PA; Rinke, C; Mussig, AJ; Hugenholtz, P ( ... All-Species Living Tree Project."16S rRNA-based LTP release 132". Silva Comprehensive Ribosomal RNA Database. Retrieved 2015-08 ... Wood ER; Ghané F; Grogan DW (September 1997). "Genetic responses of the thermophilic archaeon Sulfolobus acidocaldarius to ...
MiR-137
Cross-Disorder Group of the Psychiatric Genomics Consortium; Genetic Risk Outcome of Psychosis (GROUP) Consortium (2013). " ... 116 colorectal carcinoma cells after transfection of miR-137 with the list of predicted miR-137 targets via miRecords database ...
League of Assassins
Anya Volkova - Former League of Assassins, she collected a database about the members of the league which was stolen by the ... Respawn - A clone created with the genetic material of Deathstroke and Talia al Ghul. After escaping torture and captivity at ...
Public domain
The Europeana databases use it, and for instance on the Wikimedia Commons in February 2016 2.9 million works (~10% of all works ... Intergovernmental Committee on Intellectual Property and Genetic Resources, Traditional Knowledge and Folklore: Seventeenth ... brought a suit against Wikimedia Commons in 2016 for photographs uploaded to the database depicting pieces of art in the museum ...
Extraordinary Measures
Internet Movie Database. Retrieved January 25, 2010. "'Extraordinary Measures,' filmed in Portland and starring Brendan Fraser ... a genetic anomaly that typically kills most children before their tenth birthdays. John, an advertising executive, contacts ...
Goa (antelope)
Retrieved 29 March 2009.old-form url Database entry includes a brief justification of why this species is of near threatened. ... but also from problems associated with small populations such as lack of genetic diversity in the population, which makes them ...
Dark Empire
... at Wookieepedia Dark Empire I at the Grand Comics Database Dark Empire I at the Comic Book DB (archived from the ... The physician had deliberately inserted genetic material and contaminants into all stored samples of the Emperor's original ... Empire's End at the Grand Comics Database Empire's End at the Comic Book DB (archived from the original) (Use mdy dates from ... unless he can either fix his genetic material (an impossibility since no unaltered samples remain) or insert his spirit into ...
DNA annotation
Other databases (e.g. Ensembl) rely on curated data sources as well as a range of different software tools in their automated ... Identifying the locations of genes and other genetic control elements is often described as defining the biological "parts list ... 41 (Database issue): D536-44. doi:10.1093/nar/gks1080. PMC 3531119. PMID 23161684. Stein, L. (2001). "Genome annotation: from ... Some databases use genome context information, similarity scores, experimental data, and integrations of other resources to ...
Adobe Creek (Sonoma County, California)
Genetic analysis has proved that the steelhead trout (Oncorhyncus mykiss) that spawn and rear in the Petaluma River watershed ... "National Bridge Inventory Database". Wikimedia Commons has media related to Adobe Creek (Sonoma County, California). United ...
Browsing EMRO Journal Articles (EMHJ) by Subject "Databases, Genetic"
Listar por tema "Databases, Genetic"
Patent searches for genetic sequences: How to retrieve relevant records from patented sequence databases | Nature Biotechnology
Patent searches for genetic sequences: How to retrieve relevant records from patented sequence databases. *Guillaume Dufresne1 ... Being sequentially derived from the latter type of database, their formats are similar. Thus, database search tools such as ... Databases of patented sequences, such as the public database PAT1 (the patent sequences division of GenBank) and the ... Ouellette, B.F. & Boguski, M.S. Database divisions and homology search files: a guide for the perplexed. Genome Res. 10, 952- ...
private genetic databases
... private genetic databases, Professor Erin Murphy, rape kit, rights, totally reasonable steps by law enforcement, Transparency, ... Paying To Add Your DNA To a Government Database via Ancestry.com and 23andMe October 31, 2015. October 31, 2015. Kelly W. ... database, Dishonesty, DNA, eff, Electronic Frontier Foundation, FBI, filmmaker, freedom, Fusion.net, genealogy, government ... funded DNA databases, Harassment, Illegal search/entry, Justice System, kelly patterson, Michael Usry, murder, new orleans, New ...
Google invests in biotech company, 23andme, to form genetic database | VentureBeat
China is HARVESTING the DNA of Tibetans to create a genetic database and control the population
Gathering genetic information is important for law enforcement authorities currently engaged in criminal investigations, or for ... "Without external checks on the Ministry of Public Securitys power, police in Tibet will be free to use a mass DNA database for ... badscience, big government, biotechnology, CCP, China, communism, conspiracy, DNA harvesting, enslaved, fascism, genetic lunacy ... "Chinas collection of genetic samples without consent violates Tibetan rights under international law and strengthens its ...
Australian Rheumatology Association Database - Genetic Support Network Victoria (GSNV)
American Salers Association joins IGS genetic evaluation database | TheFencePost.com
After updating and integrating EPDs and genetic indicators for ... as one of the newest affiliates of International Genetic ... American Salers Association joins IGS genetic evaluation database. News News , Jul 28, 2020. ... The American Salers Association recently entered as one of the newest affiliates of International Genetic Solutions (IGS). ... Cumulatively, they have put together the most directly-comparable, multi-breed genetic evaluation tool available. ...
RGD Reference Report - Genetic dissection of Iddm26 in the spontaneously diabetic BBDP rat. - Rat Genome Database
Genetic engineering - Conservation, biodiversity sustainability environment issues, automated lobbying database at Information...
Search our database for the contact details of organizations that directly address Genetic Engineering ... Search our database for the contact details of organizations that directly address Genetic Engineering ... Genetic Engineering. What are Genetically Modified Organisms (GMOs)?. Humans have manipulated nature for thousands of years but ... Most genetic engineering has so far been with crops, which have been modified to either withstand herbicides or produce their ...
A Study to Establish a Patient Clinical and Genetic Information Database to Better Characterize Symptoms and Causes of...
Genetic monitoring of supportive breeding in brown trout ( Salmo trutta L.), using microsatellite DNA markers<...
Genetic monitoring of supportive breeding in brown trout ( Salmo trutta L.), using microsatellite DNA markers. In: Canadian ... Genetic monitoring of supportive breeding in brown trout ( Salmo trutta L.), using microsatellite DNA markers. Canadian Journal ... Hansen, M. M., Eg Nielsen, E., Ruzzante, D. E., Bouza, C., & Mensberg, K-L. D. (2000). Genetic monitoring of supportive ... Genetic monitoring of supportive breeding in brown trout ( Salmo trutta L.), using microsatellite DNA markers. / Hansen, ...
The bipolar disorder phenome database: A resource for genetic studies<...
The bipolar disorder phenome database: A resource for genetic studies. American Journal of Psychiatry. 2007 Aug;164(8):1229- ... The bipolar disorder phenome database: A resource for genetic studies. James Bennett Potash, Jennifer Toolan, Jo Steele, Erin B ... The bipolar disorder phenome database : A resource for genetic studies. In: American Journal of Psychiatry. 2007 ; Vol. 164, No ... Dive into the research topics of The bipolar disorder phenome database: A resource for genetic studies. Together they form a ...
Genetic Techniques for Manipulation of the Phytosterol Biotransformation Strain Mycobacterium neoaurum NRRL B-3805<...
... genetic modification is a priority. In this chapter, we describe a range of genetic techniques that can be used for M. neoaurum ... genetic modification is a priority. In this chapter, we describe a range of genetic techniques that can be used for M. neoaurum ... genetic modification is a priority. In this chapter, we describe a range of genetic techniques that can be used for M. neoaurum ... genetic modification is a priority. In this chapter, we describe a range of genetic techniques that can be used for M. neoaurum ...
Full database search - Retinal and hearing impairment genetic mutation database - Leiden Open Variation Database
Retinal and hearing impairment genetic mutation database. myosin VIIA (MYO7A) LOVD v.2.0 Build 37 [ Current LOVD status ]. Log ... Full database search. Variant listing based on patient origin. Database statistics. Switch gene. ... MYO7A DB-ID: Database IDentifier; When available, links to OMIM IDs are provided. Patient ID: Internal reference to the ... WARNING: This database is no longer updated. Please visit LOVD3 shared for the current install. ...
Applying Public Health Strategies to Primary Immunodeficiency Diseases:
A Potential Approach to Genetic Disorders
The value of mutation databases for public health assessment also is limited by the rarity of genetic laboratory confirmation ... Evaluation of Genetic Tests. In 1999, the National Institutes of Health (NIH)-U.S. Department of Energy Task Force on Genetic ... Genetic Tests and PI Diseases. Advances in molecular biology and genetic technology have facilitated localization of disease ... genetic testing examining a sample of blood or other body fluid or tissue for biochemical, chromosomal, or genetic markers that ...
Results of search for 'ccl=su:{Databases} and su-to:Genetic Counseling' › WHO HQ Library catalog
Results of search for ccl=su:{Databases} and su-to:Genetic Counseling ... Online Database IRIS GIFT HINARI PubMed Global Health Library AFRO (AIM) EMRO (IMEMR) PAHO (LILACS) SEARO (IMSEAR) WIPRO (WPRIM ... Genetic Screening : Ethical Issues. by Nuffield Council on Bioethics.. Material type: Text; Format: print ; Literary form: Not ...
Cystic Fibrosis: Practice Essentials, Background, Pathophysiology
Cystis Fibrosis Mutation Database. Cystic Fibrosis Genetic Analysis Consortium. Available at http://www.genet.sickkids.on.ca/ ... Genetic testing for cystic fibrosis. National Institutes of Health Consensus Development Conference Statement on genetic ... Additional genetic modifiers include a 129/Sv allelic contribution in mice that yields a milder inflammatory response in CF and ... Whether this is genetic or due to socioeconomic factors is unclear; low socioeconomic status is associated with significantly ...
Correlation of genetic and microbial changes in inflammatory bowel disease | GCRIS Database | Izmir Institute of Technology
How do direct-to-consumer genetic testing companies protect their customers' privacy?: MedlinePlus Genetics
Before using at-home genetic testing, find out how the company will protect your information. Find questions to help assess a ... How does the company safeguard your genetic data and other personal information that you provide? Is it stored in a database ... What do the results of direct-to-consumer genetic testing mean?. *What can raw data from a direct-to-consumer genetic test tell ... How is direct-to-consumer genetic testing done?. *How much does direct-to-consumer genetic testing cost, and is it covered by ...
Not Just San Francisco: Police Across the Country are Retaining and Searching DNA of Victims and Innocent People | Electronic...
Maryland and Montana Pass the Nations First Laws Restricting Law Enforcement Access to Genetic Genealogy Databases. ... New York introduced legislation that would do away with local DNA databases altogether. San Franciscos latest problems with ... Even if police and prosecutors in San Francisco decide to limit the DNA included in the local crime lab database, this wont ... None of this DNA can legally be entered into state or federal DNA databases-it can only be collected and then repeatedly ...
Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen | Nature Communications
Of the 50 mutants with an epidermal phenotype, 9 map to human genetic conditions with skin abnormalities. Some mutant genes are ... Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res. 39, D691-D697 (2011). ... How to cite this article: Liakath-Ali, K. et al. Novel skin phenotypes revealed by a genome-wide mouse reverse genetic screen. ... a) Coat colour of WT and Myo5a−/− mice on a BL6 genetic background. (b) Stack bar graphs shows coat colour and epidermal ...
Bt11 x MIR162 x GA21| GM Approval Database- ISAAA.org
Basic Genetic Modification. Gene Introduced. Gene Source. Product. Function. cry1Ab Bacillus thuringiensis subsp. kurstaki. ... The GM Approval Database, or GMAD, is one of ISAAAs unique features that compiles all the available information about biotech/ ... Biosafety Clearing Houses and peer-reviewed scholarly articles to maintain the credibility of the database. Your contribution ...
NIOSHTIC-2 Search Results - Full View
Databases; DNA; Deoxyribonucleic acids; Neoplasms; Genetic factors ... By performing a meta-analysis of transcriptional age signature across multi-tissues using the GTEx database, we identify 1,616 ... mortality risk and cancer stage in several types of cancer from the TCGA database, and offers complementary information to DNA ...
Awards approved
A user-friendly database of genetic dependencies in cancer A major challenge in cancer therapeutics is to kill tumour cells ... The Human Metabolome Database (HMDB) is a freely available database that contains detailed information about small molecules ... Cystinosis is a genetic disorder due to a gene defect called cystinosin, where a toxic metabolite called cysteine collects in ... The most severe form of this genetic disorder, where people carry two bad AAT genes (Z) is known as ZZ-AATD and this affects ...
Melanoma and BRAF: Practice Essentials, Clinical Implications and Genetic Testing
In a Cochrane Database study, the combination of BRAF plus MEK inhibitors was found to be the best treatment option, followed ... Clinical Implications and Genetic Testing. First-line treatment of patients with BRAF V600 wild-type or mutation-positive, ... Cochrane Database Syst Rev. 2018 Feb 6. 2:CD011123. [QxMD MEDLINE Link]. ... physicians in private practice who do not routinely process specimens for genetic testing might find that waiting for a ...
The Lancet, 27 March 2004, Volume 363, Issue 9414, Pages 1001-1086
A study to understand more about issues related to genetic testing for prostate cancer risk | Cancer Research UK
... issues related to genetic testing for prostate cancer risk. ... The genetic profiling results were given to the men alongside ... The men used the results of their genetic tests to talk to others and this is important as it can help genetic information to ... Most of them understood the limitations of genetic testing. *Some men were concerned that genetic testing could worry people ... The researchers say that genetic testing is complicated as cancer risk is a combination of both genetic and environmental ...
GenesMutation databaseGeneticsSequencesGenomicVariants associatedAccess to genetic genealogy databasesDirect-to-Consumer Genetic TestVariationDissectionFingerprintProteinDataPolymorphismsLinkageBiobankMutationsClinicalSearchGenealogist20192021LociHumansCounselorsSubsetGenealogyResearchersMolecularGene expressionVariabilityDiseasesDiseasePopulationsBiologicalDisorders23andMeSusceptibilityUnderstandingTraitsVaccineCenters2000Human geneticAnalysesModificationAbnormalitiesOrganismsSequenceLimitationsDiversityAbstractVariationsPhenotypicSpeciesDetectImportantEstablishImplicationsMarkersSamplesStudy
Genes14
- Thus, database search tools such as BLAST 3 and FASTA 4 , which are designed to locate biologically relevant sequences, are also usually used to assess the intellectual property content 5 of genes. (nature.com)
- Although most of the genes that have been identified are associated with rare genetic disorders, genes that confer susceptibility to common diseases such as cancer, heart disease, and diabetes are also being discovered. (cdc.gov)
- By performing a meta-analysis of transcriptional age signature across multi-tissues using the GTEx database, we identify 1,616 common age-related genes, as well as tissue-specific age-related genes. (cdc.gov)
- A curated database of candidate human ageing-related genes and genes associated with longevity and/or ageing in model organisms. (senescence.info)
- A curated database of genes associated with dietary restriction in model organisms either from genetic manipulation experiments or gene expression profiling. (senescence.info)
- Database of human genes associated with cellular senescence. (senescence.info)
- The 1,000 individuals were screened for variants in 114 genes selected by an expert panel for their association with medically actionable genetic conditions possibly undiagnosed in adults. (nih.gov)
- Genetics is the study of genes , heredity , and the variation of organisms , as well as the medical practice of diagnosing, treating, and counseling patients with genetic disorders . (wikipedia.org)
- To read these genes, researchers use primers-short, manufactured DNA pieces that complement segments of DNA found in a species' genome and serve as anchor points to start genetic sequencing. (mbari.org)
- Such genes might be also investigated in terms of association with CAD by performing a genome wide association study using the UK Biobank database and the repository of gene variants, (single nucleotype polymorphisms , SNP), excluding those genes related to the common risk factors. (ukbiobank.ac.uk)
- More, the function of the identified genes can be investigated using the large database of phenotypic data (clinical and biochemical) in carriers of the one or two copies of the gene variants (SNP) under investigation. (ukbiobank.ac.uk)
- Antimicrobial resistance occurs through different mechanisms, which include spontaneous (natural) genetic mutations and horizontal transfer of resistant genes through deoxyribonucleic acid (DNA). (who.int)
- Databases devoted to knowledge about specific genes and gene products. (bvsalud.org)
- Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. (ebi.ac.uk)
Mutation database2
- Among the 1,000 participants, 585 instances of 239 unique variants were identified as disease causing in the Human Gene Mutation Database (HGMD). (nih.gov)
- Cystis Fibrosis Mutation Database. (medscape.com)
Genetics7
- Method: Participants were ascertained for two bipolar disorder genetic linkage studies: the University of Chicago, Johns Hopkins, and National Institute of Mental Health (NIMH) Intramural Program (CHIP) Collaboration and the NIMH Genetics Initiative project. (elsevier.com)
- Researchers and clinicians can use this database to explore the connections between phenomenology and genetics in a cohort that is adequately powered to detect even modest genetic effects in bipolar disorder. (elsevier.com)
- A newly published paper in Genetics in Medicine has reinforced the fundamental importance of collecting information about genetic variances in a single large database. (sinaihealth.ca)
- The investigators and participants of the Canadian Open Genetics Repository have also partnered with numerous international organizations to connect their database with other data sharing initiatives to make it public and available to the broader community of researchers, patients and clinicians. (sinaihealth.ca)
- But surprisingly, molecular genetics has discovered that all organisms are equivalent to each other in their basic genetic structures. (hstalks.com)
- In modern research, genetics provides important tools in the investigation of the function of a particular gene, e.g. analysis of genetic interactions . (wikipedia.org)
- Ongoing work includes integration of information to allow navigation via comparative genomics from genetics loci to chromosome, and development of crop genetics databases. (edu.au)
Sequences12
- Databases of patented sequences, such as the public database PAT 1 (the patent sequences division of GenBank) and the proprietary database GENESEQ 2 (provided by Derwent Thomson Scientific), are updated repositories that can be used to run patent searches. (nature.com)
- Apart from ancillary annotation, patented sequence databases comprise the same type of information-DNA and polypeptide sequences-as primary DNA and protein databases 1 such as EMBL, GenBank, and DDBJ. (nature.com)
- NEW YORK - Embleema said on Thursday that it has received a $2 million contract from the US Food and Drug Administration to help advance the agency's Database for Reference Grade Microbial Sequences (FDA-ARGOS) for combating infectious diseases. (genomeweb.com)
- On this occasion, Kovalchuk said during the events of the first Russian forum of the wine industry: "During the year, the specialists of our center were able to decipher the genetic sequences of more than 200 grape varieties, and now we have the largest grape genetic database in the world. (asumetech.com)
- Geneticist sequences own genome, finds genetic cause of his disease If you've got an inherited disease and you want to find the genetic faults responsible, it certainly helps if you're a prominent geneticist. (scienceblogs.com)
- Genetic diversity at its most elementary level is represented by differences in the sequences of nucleotides (adenine, cytosine, guanine, and thymine) that form the DNA (deoxyribonucleic acid) within the cells of the organism. (hstalks.com)
- The team created the most complete library of DNA sequences from comb jellies, adding 72 species to the global database where only 15 had been represented before. (mbari.org)
- CDC performs genome sequencing to compare the genetic sequences of vaccine viruses with those of circulating viruses. (cdc.gov)
- A database was created from previously published mtDNA HVS I sequences (representing 2,615 individuals from different Asian and European populations) and 74 modern Hungarian sequences from the present study. (blogspot.com)
- The data may be either a list of database accession numbers, NCBI gi numbers, or sequences in FASTA format. (nih.gov)
- No BLAST database contains all the sequences at NCBI. (nih.gov)
- The search will be restricted to the sequences in the database that correspond to your subset. (nih.gov)
Genomic5
- The large amount of genetic information accumulated in the post-genomic era needs to be transformed into knowledge 1 . (nature.com)
- Clearly, in order for personal genomic tests to make any difference in improving health, we need to conduct additional research on the benefits and harms of genetic tests in the same way we collect research data about other types of health information. (cdc.gov)
- Genetic and genomic analyses might be able. (awionline.org)
- Graham King has developed and characterised a range of Brassica genetic and genomic resources underpinning crop improvement traits. (edu.au)
- Using genetic and genomic approaches, we identified several significant genomic markers associated with early abortion. (agri.gov.il)
Variants associated2
- Database of human genetic variants associated with longevity. (senescence.info)
- The ample use of genome-wide and exome-wide association study methodology (GWAS and EWAS) made it possible to identify a large number of genetic variants associated with diseases. (nih.gov)
Access to genetic genealogy databases1
- Why police should not have access to genetic genealogy databases? (ru-facts.com)
Direct-to-Consumer Genetic Test3
- How do direct-to-consumer genetic testing companies protect their customers' privacy? (medlineplus.gov)
- If you are considering direct-to-consumer genetic testing , it is important to know how the testing company will protect your information. (medlineplus.gov)
- Most direct-to-consumer genetic testing companies provide detailed information on their websites about their privacy and security practices. (medlineplus.gov)
Variation5
- Reference describing the variation, 'Submitted:' indicating that the mutation was submitted directly to this database. (lumc.nl)
- With 'precision medicine' on the rise and as improved treatments and novel management strategies become available, sharing data is becoming increasingly important because more observations are needed to understand the relationship between genetic variation and disease. (sinaihealth.ca)
- Overall, our study highlights that parasites play an important role in shaping host genetic variation and suggests that the use of large sets of neutral markers may be more appropriate for the study of heterozygosity-fitness correlations. (datadryad.org)
- Thus, genetic variation in noncoding regions of the genome can increase the susceptibility to diseases by disrupting various regulatory elements (promoters, enhancers, silencers, insulator regions, etc. (nih.gov)
- Genetic variation is low (Matsui and Hayashi 1992, Matsui et al. (amphibiaweb.org)
Dissection1
- Genetic dissection of Iddm26 in the spontaneously diabetic BBDP rat. (mcw.edu)
Fingerprint2
- The Next Generation Identification system, or NGI, the successor to the FBI's criminal fingerprint database, is designed to quickly ID crooks through facial recognition, iris matching, tattoo cross-checks and vocal recordings, among other unique traits. (nextgov.com)
- The mitochondrial gene cytochrome-c-oxidase subunit I ( COI ) is like a genetic fingerprint for animals. (mbari.org)
Protein1
- Pearson, W. Using the FASTA program to search protein and DNA sequence databases. (nature.com)
Data31
- A person's genetic data represent personal, private health information. (medlineplus.gov)
- Once you take the test, who owns your genetic data? (medlineplus.gov)
- How does the company safeguard your genetic data and other personal information that you provide? (medlineplus.gov)
- Will the company share your genetic data or sell it to pharmaceutical or biotechnology companies, academic institutions, or nonprofit organizations? (medlineplus.gov)
- If you do not want your genetic data shared, sold, or used for research, can you opt out? (medlineplus.gov)
- Many companies now provide explicit information about whether and how your genetic data may be accessed by law enforcement officials. (medlineplus.gov)
- If you upload your data to public databases, such as those administered by some third-party interpretation services , that information will be available to law enforcement. (medlineplus.gov)
- When all was said done, U.K. Biobank had assembled one of the largest single genetic data sets ever. (theatlantic.com)
- This spring, 11 years after the first volunteer gave up a tube of blood, U.K. Biobank announced it would release its full genetic data set to registered scientists in July. (theatlantic.com)
- U.K. Biobank had done data releases before, including an earlier subset of the genetic data set with just over 100,000 people. (theatlantic.com)
- Its data is open to anyone in the world, as long as they are a legitimate researcher and pay a fee commensurate with the amount of data they want to access-a couple thousand dollars for the full genetic data. (theatlantic.com)
- He added: "The use of genetic data allows us to quickly conduct scientific tests. (asumetech.com)
- The database is the first of its kind in Canada that allows for sharing of DNA data between geographically distant laboratories using a common platform. (sinaihealth.ca)
- A data frame with each row being a DNA profile and each column a part of a genetic marker. (rdrr.io)
- The problems are multiplied when biometrics databases are "multimodal," allowing the collection and storage of several different biometrics in one database and combining them with traditional data points like name, address, social security number, gender, race, and date of birth. (eff.org)
- 4.6 ) How much database disk space is required to store data from a typical text file? (sql.org)
- Importantly, the genetic data we have shared to public databases will provide a valuable reference for others using eDNA to help reveal the complexity of ocean ecosystems," said Christianson. (mbari.org)
- Pulmonary function data from 1988 to 2003 were retrieved from the Phoenix Fire Department's medical monitoring database. (cdc.gov)
- The aim of this study is to interrogate UK Biobank databank, by extracting genetic data of the Myocyte Enhancer Factor 2A (MEF2A) gene and try understand if small genietc variations of the gene do associate with the features of the cardiovascular disease filed in the databank. (ukbiobank.ac.uk)
- Dissecting the regulatory roles of polymorphic loci have been impossible without close integration of modern experimental approaches with computer analysis of a growing wealth of genetic and biological data obtained using omics technologies. (nih.gov)
- 3) resources containing in silico predicted data on the potential impact of genetic variants on the transcription factor binding sites. (nih.gov)
- The database, funded by the National Science Foundation, provides researchers, conservation managers, educators, and the public with access to a wealth of fundamental biological data. (lpzoo.org)
- Due to the increasingly important role of Personally identifiable information (PII), courts and legislatures have been attempting to balance the interests of the individual in protecting their genetic information with the usefulness and necessity of that same data for criminal investigation. (llrx.com)
- MDP also tests all isolates for antimicrobial resistance and contributes data to the National Antimicrobial Resistance Monitoring (NARMS) database. (foodsafetynews.com)
- The electrophysiology data was collected in a highly standardized way to facilitate comparison across all cells in the database. (yale.edu)
- Data and models from the Allen Cell Types Database are made available to the community under the Allen Institute's Terms of Use and Citation Policy. (yale.edu)
- Dr Heidi Mattock and use genetic data to identify the etiology of human canceRs. (who.int)
- DNA databases, or cohesive collections of DNA profiles, of individuals who have opted in to gather more information about their personal genetic history have been susceptible to risk of privacy disclosure of large corporations who own the DNA database data of these individuals. (unc.edu)
- Genetic toxicologists as experts should consider data quality and reliability, and give a critical review of all available information for sup- port of classification. (cdc.gov)
- The Tracking Network uses data from the U.S. Census Bureau external icon , hospital and emergency department databases provided by state and/or local health departments, and death certificates from the National Center for Health Statistics to calculate state and local data about heart disease. (cdc.gov)
- Our data scientists are helping researchers create reliable ways of collecting and managing data associated with complex studies and genetic sequencing efforts. (medlineplus.gov)
Polymorphisms1
- Future studies in firefighters have been proposed to evaluate the interaction between exposure to products of combustion and genetic polymorphisms in relation to decline in lung function. (cdc.gov)
Linkage2
- Several of the resulting variables were characterized in the total cohort and tested for familial clustering, heritability, and statistical power in genetic linkage and association studies. (elsevier.com)
- The cohort assembled in this study offers substantial power to carry out genetic linkage and association studies that use specific clinical features as covariates or as primary phenotypes. (elsevier.com)
Biobank2
- This huge amount of genetic information, combined with the thousands of other characteristics tracked by U.K. Biobank, allows scientists to look for the genetic determinants of virtually any disease. (theatlantic.com)
- The high dimensionality of the patients' database and of the panel of SNP of the biobank might help to answer the question. (ukbiobank.ac.uk)
Mutations2
- These studies then suggest that genetic mutations in the MEF2A gene, able to reduce the gene functionality, might be associated with an increased risk of cardiovascular disease. (ukbiobank.ac.uk)
- mutations high frequency of IDH1/2 mutations in oligodendrogliomas, astrocytomas and in alteRations in the RB1 pathway in The TET2 gene encodes the -KG- secondary glioblastomas derived thereof low-gRade diffuse gliomas lacking dependent enzyme that catalyses suggests that these tumours share a common genetic alteRations the conversion of 5-methylcytosine to common progenitor cell population. (who.int)
Clinical6
- Although family health history has been used in clinical practice for generations, as an aid to diagnose and manage hundreds of genetic disorders, it has its limitations, including lack of access to this information for many people. (cdc.gov)
- As you know, it is often difficult to provide a diagnosis for a young patient with some clinical signs and symptoms of a genetic disorder. (chromodisorder.org)
- It seems that the genetic diagnosis of BRCA1/BRCA2 has its clinical practice. (knowcancer.com)
- It has been applied to the clinical service by utilizing DHPLC for the genetic diagnosis of BRCA1 and BRCA2 of breast cancer patients in the department of Genetic Medicine of our hospital. (knowcancer.com)
- Second, we would lie to set up the new technique of DHPLC combining with direct DNA sequencing in the genetic diagnosis of ovarian cancer patients for the future clinical service in our hospital. (knowcancer.com)
- The most recent HbA1c values and lipid levels were retrieved from clinical laboratory databases. (cdc.gov)
Search4
- Ouellette, B.F. & Boguski, M.S. Database divisions and homology search files: a guide for the perplexed. (nature.com)
- Ancestry Global Search is a genealogical search engine that searches all of the databases included in the Ancestry.com Library. (ru-facts.com)
- Last week, Maryland and Montana passed laws requiring judicial authorization to search consumer DNA databases in criminal investigations. (eff.org)
- You can use Entrez query syntax to search a subset of the selected BLAST database. (nih.gov)
Genealogist4
- How much does it cost to hire a genetic genealogist? (ru-facts.com)
- How much does a genetic genealogist make? (ru-facts.com)
- How much money does a genetic genealogist make? (ru-facts.com)
- What degree do you need to be a genetic genealogist? (ru-facts.com)
20191
- As of 2019, the Orange County database included DNA from 150,000 people who would not otherwise be required to give the state their DNA. (eff.org)
20211
- Lincoln Park Zoo's direct development of the database ended in 2021, but international partners continue to expand this valuable resource. (lpzoo.org)
Loci1
- This article documents the addition of 205 microsatellite marker loci to the Molecular Ecology Resources Database. (edu.au)
Humans1
- d) and not at all that there are known genetic differences in the metabolism of humans. (anstageslicht.de)
Counselors2
- Participants included geneticists, obstetricians, pediatricians, epidemiologists, teratologists, dysmorphologists, and genetic counselors who had a particular interest in CVS studies or who represented professional organizations and government agencies. (cdc.gov)
- Physicians, genetic counselors, therapists and other healthcare professionals, register now to help us learn more about rare chromosome disorders: the associated symptoms, new research and evolving treatments. (chromodisorder.org)
Subset1
- We found a significant relationship between probability of infection and host genetic diversity estimated at the subset of neutral markers that was not explained by strong local effects and did not differ among the studied populations. (datadryad.org)
Genealogy10
- Genealogy databases and the future of criminal investigation. (medlineplus.gov)
- How do police use genetic genealogy? (ru-facts.com)
- The technique involves uploading a crime scene DNA profile to one or more genetic genealogy databases with the intention of identifying a criminal offender's genetic relatives and, eventually, locating the offender within the family tree. (ru-facts.com)
- Is genetic genealogy ethical? (ru-facts.com)
- How do I get into genetic genealogy? (ru-facts.com)
- The single best way to learn about genetic genealogy is the hands-on approach: test yourself and numerous family members, and then explore the results using the tools at the vendor(s)' website. (ru-facts.com)
- 2. Books and articles are a good way to gain a basic understanding of the fundamentals of genetic genealogy. (ru-facts.com)
- These are welcome and important restrictions on forensic genetic genealogy searching (FGGS)-a law enforcement technique that has become increasingly common and impacts the genetic privacy of millions of Americans.Consumer personal. (eff.org)
- In August, a new DNA profile for Pelkey was generated, uploaded into a public-access genealogy database and yielded several matches that helped construct a family tree for the then-unidentified victim. (homernews.com)
- He said ABI is utilizing genetic genealogy in an attempt to identify her remains as well. (homernews.com)
Researchers9
- Researchers wanted to understand more about what men think about being tested, and look at the issues surrounding genetic testing. (cancerresearchuk.org)
- The researchers did not find this surprising as the men had known about prostate cancer in their family for a long time, but genetic testing was quite new to them. (cancerresearchuk.org)
- The researchers concluded that this was a useful study to help understand more about the issues related to genetic testing for men with prostate cancer. (cancerresearchuk.org)
- The researchers say that genetic testing is complicated as cancer risk is a combination of both genetic and environmental factors. (cancerresearchuk.org)
- The researchers also say that it is important that genetic profiling test results are given alongside detailed individual genetic counselling. (cancerresearchuk.org)
- Within two weeks, David Howard and Andrew McIntosh, psychiatry researchers at the University of Edinburgh, had posted not one but two preprints, one on genetic variants linked to depression and the other to neuroticism . (theatlantic.com)
- With so much important genetic information being used globally to understand the underlying genetic influences of diseases, researchers and clinicians need an accessible repository to share this information. (sinaihealth.ca)
- To this end, scientists at Lincoln Park Zoo's Alexander Center for Applied Population Biology worked with an international team of demographic researchers to develop the COMPADRE and COMADRE Matrix Database, an open-access online repository for MPMs. (lpzoo.org)
- The GenBank sequence database helps researchers and public health authorities see if the virus is changing in a way that might require different kinds of treatment or prevention. (medlineplus.gov)
Molecular2
- Issues in searching molecular sequence databases. (nature.com)
- The present review focuses on the molecular genetic mechanisms by which pathogenic genetic variants affect gene expression. (nih.gov)
Gene expression1
- A triggering event mediating the effect of a pathogenic genetic variant on the level of gene expression can be, for example, a change in the functional activity of transcription factor binding sites (TFBSs) or DNA methylation change, which, in turn, affects the functional activity of promoters or enhancers. (nih.gov)
Variability2
- However, it is important to ensure that supportive breeding does not result in inbreeding and loss of genetic variability. (dtu.dk)
- However, no attempt has been made to investigate the genetic variability and genetic control of the agronomic morphometric characters of the species. (journalcra.com)
Diseases3
- Understanding the importance of host genetic diversity for coping with parasites and infectious diseases is a long-standing goal in evolutionary biology. (datadryad.org)
- Whole genome and whole exome sequencing technologies play a very important role in the studies of the genetic aspects of the pathogenesis of various diseases. (nih.gov)
- However, identification of the mechanisms of influence of pathogenic genetic variants on the diseases risk is difficult due to a wide variety of regulatory elements. (nih.gov)
Disease6
- Huge genetic databases are changing how scientists study disease. (theatlantic.com)
- How do you go about researching a genetic disease? (scienceblogs.com)
- Genetic variants in embryonic lethal, abnormal vision, Drosophila-like 4 (ELAVL4) have been reported to be associated with onset age of Parkinson disease (PD) or risk for PD affection in Caucasian populations. (healthpartners.com)
- Nevertheless, in some cases CAD seems to be inherited as a genetic disease. (ukbiobank.ac.uk)
- Any isolated pathogens are sent for pulsed field gel electrophoresis (PFGE) testing and the resulting genetic pattern is uploaded to the Centers for Disease Control PulseNet database so that it can be matched against human isolates or outbreak patterns. (foodsafetynews.com)
- Systematic meta-analyses of Alzheimer disease genetic association studies: the AlzGene database. (bvsalud.org)
Populations3
- In two populations subject to supportive breeding, there were strong indications of reduced effective population sizes, and significant genetic differentiation was observed between different samples from the same population. (dtu.dk)
- Here, we study the association between probability of infection by avian malaria (Plasmodium relictum) and individual genetic diversity in three blue tit (Cyanistes caeruleus) populations that strongly differ in prevalence of this parasite. (datadryad.org)
- This database was used to determine the relationships between the ancient Cumanians, modern Hungarians, and Eurasian populations and to estimate the genetic distances between these populations. (blogspot.com)
Biological3
- Objective: The purpose of this study was to assemble and validate a database of phenotypic variables that were collected from families with bipolar disorder as a resource for genetic and other biological studies. (elsevier.com)
- Loosely defined, bioinformatics is the management and analysis of biological information contained in databases. (the-scientist.com)
- Due to this revolutionary discovery, a great unification of all biological organisms has occurred, and information-genetic lines of investigations became one of the most promising avenues for gaining an improved perspective not just in the area of biological research but in science as a whole. (hstalks.com)
Disorders1
- All participants underwent detailed, phenotypic assessment with either the Schedule for Affective Disorders and Schizophrenia-Lifetime Version or one of four versions of the Diagnostic Interview for Genetic Studies. (elsevier.com)
23andMe1
- Maverick tech entrepreneur Martin Varsavsky , for instance, wrote on his blog in January that 23andMe will take in saliva samples through the mail, then subject them to a fast and relatively inexpensive genetic analysis. (venturebeat.com)
Susceptibility1
- CDC will continue to monitor XDR Shigella infections and track Shigella isolates with unique or worrisome antimicrobial susceptibility patterns and genetic resistance markers. (cdc.gov)
Understanding3
- Understanding the genetic evolution of A [H1N1]pdm09 and H3N2 viruses can help better select strains to be included in the annual influenza vaccine. (who.int)
- The WhosAge database contains people and biotech companies that are contributing to increase our understanding of ageing and life-extension. (senescence.info)
- Advances in understanding the genetic basis of crop traits requires detailed knowledge of the complex genome structure of Brassica species. (edu.au)
Traits2
- This database stores tens of billions of associations of genetic variants with human traits, investigated by the scientific community in hundreds of studies. (polyomica.com)
- Genetic traits may be involved here. (krebsdaten.de)
Vaccine3
- A new bill is moving through Congress that brings us closer to a national vaccine database telling the government whether you're vaccinated. (anh-usa.org)
- The bill would spend $400 million to modernize state "immunization information systems" which, we are told, are confidential, population-based databases that maintain a record of vaccine administrations. (anh-usa.org)
- Although public health agencies are beginning to integrate genetic information in outbreak investigations and surveys, we do not know enough right now to use this information to mitigate adverse vaccine effects or target intervention strategies. (cdc.gov)
Centers1
- CDC partners with three state laboratories that now act as regional reference centers doing genetic sequencing using CDC's standard testing practices. (cdc.gov)
20001
- This database, created in 2000, is updated every three months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research. (awionline.org)
Human genetic2
- Thus, we suggest that electronic medical recording and human genetic databases are considered together in future directions of pharmacovigilance. (toxicolres.org)
- Of the 50 mutants with an epidermal phenotype, 9 map to human genetic conditions with skin abnormalities. (nature.com)
Analyses1
- Analyses using the AnAge database to study the evolution of longevity and ageing in vertebrate lineages. (senescence.info)
Modification2
- However to improve this strain for industrial use, genetic modification is a priority. (york.ac.uk)
- No lab-coated genetic modification , just good old fashioned selective breeding - the stuff we've been doing for tens of thousands of years. (marksdailyapple.com)
Abnormalities2
Organisms2
- A curated database of compounds that modulate longevity in model organisms. (senescence.info)
- Within organisms , genetic information generally is carried in chromosomes , where it is represented in the chemical structure of particular DNA molecules . (wikipedia.org)
Sequence2
- First, we will utilize the new technique of DHPCL with direct DNA sequence to set up the database of BRCA1 and BRCA2 gene mutation of ovarian cancer patients in Taiwan. (knowcancer.com)
- Select the sequence database to run searches against. (nih.gov)
Limitations2
- If future prostate screening programmes include genetic information to decide on who can be screened, it is important to understand the strengths and the limitations of genetic testing. (cancerresearchuk.org)
- Thus, we address the characteristics and limitations on retrospective EMR database studies in hospital settings. (toxicolres.org)
Diversity2
- A combination of subtle positive and negative local effects and/or a saturation threshold in the association between probability of infection and host genetic diversity in combination with increased resistance to parasites in highly homozygous individuals may explain the observed negative quadratic relationship. (datadryad.org)
- This series has been designed to describe how genetic diversity can be explored using bioinformatics. (hstalks.com)
Abstract1
- abstract = "Among several methods of extracting association rules that have been reported, a new evolutionary computation method named Genetic Network Programming (GNP) has also shown its effectiveness for small datasets that have a relatively small number of attributes. (upenn.edu)
Variations1
- The association of MEF2A genetic variations with CAD then remains an open question. (ukbiobank.ac.uk)
Phenotypic2
- Results: The combined database of phenotypic variables contained 197 variables on 5,721 subjects in 1,177 families. (elsevier.com)
- Conclusions: This is the largest database of phenotypic variables yet assembled for bipolar disorder, and it is now available to the research community. (elsevier.com)
Species2
- But genetic engineering goes beyond the natural limits of breeding within closely related species. (informaction.org)
- All the characters studied, however, displayed a relatively wide distribution of factor combinations, indicating that the plant species under study has a broad genetic base. (journalcra.com)
Detect1
- If we can detect the possibility of genetic mutation earlier, we may deal with the suspected areas of malignancy as soon as possible. (knowcancer.com)
Important2
- Gathering genetic information is important for law enforcement authorities currently engaged in criminal investigations, or for scientists conducting research. (newstarget.com)
- A study on the genetic control and potential of the important agronomic characters of curcuma zedoaria rosc. (journalcra.com)
Establish1
- It will become a most powerful tool to establish the database of BRCA1 or BRCA2 gene mutation of the ovarian cancer patients in Taiwan, when we can use the technique of DHPLC combining with the direct DNA sequencing. (knowcancer.com)
Implications1
- Because everyone shares genetic similarities with their relatives, it may have implications not only for your own privacy but for that of people who are related to you. (medlineplus.gov)
Markers1
- Database containing 1,000 simulated DNA profiles typed on ten autosomal markers. (rdrr.io)
Samples2
- China's collection of genetic samples without consent violates Tibetan rights under international law and strengthens its already ruthless surveillance regime," he said. (newstarget.com)
- All flu virus samples (about 6,000 to 8,000 samples) submitted to CDC now undergo full genetic sequencing as a first step. (cdc.gov)
Study6
- This study looked at the mental, emotional and social (psychosocial) issues related to genetic testing for prostate cancer risk. (cancerresearchuk.org)
- This study was one of the first to look at the interpretation of information from genetic profile results. (cancerresearchuk.org)
- The study team found that although the men found the results of the genetic profiling interesting, they didn't think the results were more significant than their family history of prostate cancer . (cancerresearchuk.org)
- In a Cochrane Database study, the combination of BRAF plus MEK inhibitors was found to be the best treatment option, followed by BRAF inhibitors and combination of anti‐CLA4 plus anti‐PD1 monoclonal antibodies, anti‐PD1 monoclonal antibodies, MEK inhibitors, anti‐CTAL4 monoclonal antibodies, biochemotherapy, and conventional chemotherapy. (medscape.com)
- Our study objectives were to assess the evidence for genetic involvement in the rate of lung function decline in a population of firefighters. (cdc.gov)
- In recent times many companies have developed therapeutic strategies able to delivery engineered genetic products within the human tissues, and if the present study will confirm that MEF2A is associated with atherosclerosis, a targeted delivery of a modified version of the MEF2A gene within the arterial cells might represent a future therapeutic option able to revert atherosclerosis in subject with occluded arteries, or at least to prevent future cardiovascular events. (ukbiobank.ac.uk)