Cyanothece
Nitrogen Fixation
Cyanobacteria
Freeze Substitution
Nitrogenase
Photosynthesis
Heterotrophic Processes
Phototrophic Processes
Hydrogen
Characterization of two potentially universal turn motifs that shape the repeated five-residues fold--crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142. (1/27)
The genome of the diurnal cyanobacterium Cyanothece sp. PCC 51142 has recently been sequenced and observed to contain 35 pentapeptide repeat proteins (PRPs). These proteins, while present throughout the prokaryotic and eukaryotic kingdoms, are most abundant in cyanobacteria. The sheer number of PRPs in cyanobacteria coupled with their predicted location in every cellular compartment argues for important, yet unknown, physiological and biochemical functions. To gain biochemical insights, the crystal structure for Rfr32, a 167-residue PRP with an N-terminal 29-residue signal peptide, was determined at 2.1 A resolution. The structure is dominated by 21 tandem pentapeptide repeats that fold into a right-handed quadrilateral beta-helix, or Rfr-fold, as observed for the tandem pentapeptide repeats in the only other PRP structure, the mycobacterial fluoroquinoline resistance protein MfpA from Mycobacterium tuberculosis. Sitting on top of the Rfr-fold are two short, antiparallel alpha-helices, bridged with a disulfide bond, that perhaps prevent edge-to-edge aggregation at the C terminus. Analysis of the main-chain (Phi,Psi) dihedral orientations for the pentapeptide repeats in Rfr32 and MfpA makes it possible to recognize the structural details for the two distinct types of four-residue turns adopted by the pentapeptide repeats in the Rfr-fold. These turns, labeled type II and type IV beta-turns, may be universal motifs that shape the Rfr-fold in all PRPs. (+info)Cloning, expression, crystallization and preliminary crystallographic analysis of a pentapeptide-repeat protein (Rfr23) from the bacterium Cyanothece 51142. (2/27)
A unique feature of cyanobacteria genomes is the abundance of genes that code for hypothetical proteins containing tandem pentapeptide repeats approximately described by the consensus motif A(N/D)LXX. To date, the structures of two pentapeptide-repeat proteins (PRPs) have been determined, with the tandem pentapeptide-repeat sequences observed to adopt a novel type of right-handed quadrilateral beta-helix, or Rfr-fold, in both structures. One structure, Mycobacterium tuberculosis MfpA, is a 183-residue protein that contains 30 consecutive pentapeptide repeats and appears to offer antibiotic resistance by acting as a DNA mimic. The other structure, Cyanothece 51142 Rfr32, is a 167-residue protein that contains 21 consecutive pentapeptide repeats. The function of Rfr32, like the other 35 hypothetical PRPs identified in the genome of Cyanothece, is unknown. In an effort to understand the role of PRPs in cyanobacteria and to better characterize the structural properties of Rfr-folds with different amino-acid sequences, a second PRP from Cyanothece 51142, Rfr23, has been cloned, expressed and purified. Selenomethione-substituted protein was crystallized by vapor diffusion in hanging drops. Nearly complete SAD and native diffraction data sets were collected from these crystals to 2.5 and 2.1 A resolution, respectively, using synchrotron radiation. The crystals belonged to space group I4(1), with unit-cell parameters a = b = 106.61, c = 53.37 A, and one molecule per asymmetric unit. Preliminary analysis of the electron-density map from the SAD data shows that Rfr23 contains an Rfr-fold. (+info)The cyanobacterial endosymbiont of the unicellular algae Rhopalodia gibba shows reductive genome evolution. (3/27)
(+info)Differential transcriptional analysis of the cyanobacterium Cyanothece sp. strain ATCC 51142 during light-dark and continuous-light growth. (4/27)
(+info)Global transcriptomic analysis of Cyanothece 51142 reveals robust diurnal oscillation of central metabolic processes. (5/27)
(+info)The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle. (6/27)
(+info)Structural characterization of the protein cce_0567 from Cyanothece 51142, a metalloprotein associated with nitrogen fixation in the DUF683 family. (7/27)
(+info)Effect of continuous light on diurnal rhythms in Cyanothece sp. ATCC 51142. (8/27)
(+info)I'm sorry for any confusion, but "Cyanothece" is not a medical term or concept. It is actually the name of a genus of cyanobacteria (blue-green algae), which are capable of both oxygenic photosynthesis and nitrogen fixation. These bacteria have attracted interest in various scientific fields due to their potential applications in bioenergy, bioremediation, and basic biological research.
If you have any questions related to medical terminology or health-related topics, I'd be happy to help!
Nitrogen fixation is a process by which nitrogen gas (N2) in the air is converted into ammonia (NH3) or other chemically reactive forms, making it available to plants and other organisms for use as a nutrient. This process is essential for the nitrogen cycle and for the growth of many types of plants, as most plants cannot utilize nitrogen gas directly from the air.
In the medical field, nitrogen fixation is not a commonly used term. However, in the context of microbiology and infectious diseases, some bacteria are capable of fixing nitrogen and this ability can contribute to their pathogenicity. For example, certain species of bacteria that colonize the human body, such as those found in the gut or on the skin, may be able to fix nitrogen and use it for their own growth and survival. In some cases, these bacteria may also release fixed nitrogen into the environment, which can have implications for the ecology and health of the host and surrounding ecosystems.
Cyanobacteria, also known as blue-green algae, are a type of bacteria that obtain their energy through photosynthesis, similar to plants. They can produce oxygen and contain chlorophyll a, which gives them a greenish color. Some species of cyanobacteria can produce toxins that can be harmful to humans and animals if ingested or inhaled. They are found in various aquatic environments such as freshwater lakes, ponds, and oceans, as well as in damp soil and on rocks. Cyanobacteria are important contributors to the Earth's oxygen-rich atmosphere and play a significant role in the global carbon cycle.
Freeze substitution is a histological technique used to preserve the ultrastructure of biological samples, mainly at the electron microscopy level. This method is used to prevent the formation of ice crystals during the freezing process that can damage cellular structures. In freeze substitution, the frozen sample is placed in a chemical fixative at low temperatures, typically between -80°C to -90°C, and then gradually warmed up to room temperature. During this process, the fixative replaces the ice in the sample, preserving the native structure of the cells and their organelles. This technique is particularly useful for studying lipid-rich tissues and membrane structures that are sensitive to ice crystal formation during freezing.
Nitrogenase is not a medical term, but a biological term used in the field of microbiology and biochemistry. It refers to an enzyme complex found in certain bacteria and archaea that have the ability to fix nitrogen gas (N2) from the atmosphere into ammonia (NH3), a form of nitrogen that can be utilized by plants and other organisms for growth and development. This process is known as biological nitrogen fixation, which is essential for maintaining the global nitrogen cycle and supporting life on Earth.
The medical field may refer to nitrogenase in relation to human health in the context of understanding the role of nitrogen-fixing bacteria in soil fertility and their impact on agriculture and food production. However, there is no direct medical definition or application for nitrogenase.
Photosynthesis is not strictly a medical term, but it is a fundamental biological process with significant implications for medicine, particularly in understanding energy production in cells and the role of oxygen in sustaining life. Here's a general biological definition:
Photosynthesis is a process by which plants, algae, and some bacteria convert light energy, usually from the sun, into chemical energy in the form of organic compounds, such as glucose (or sugar), using water and carbon dioxide. This process primarily takes place in the chloroplasts of plant cells, specifically in structures called thylakoids. The overall reaction can be summarized as:
6 CO2 + 6 H2O + light energy → C6H12O6 + 6 O2
In this equation, carbon dioxide (CO2) and water (H2O) are the reactants, while glucose (C6H12O6) and oxygen (O2) are the products. Photosynthesis has two main stages: the light-dependent reactions and the light-independent reactions (Calvin cycle). The light-dependent reactions occur in the thylakoid membrane and involve the conversion of light energy into ATP and NADPH, which are used to power the Calvin cycle. The Calvin cycle takes place in the stroma of chloroplasts and involves the synthesis of glucose from CO2 and water using the ATP and NADPH generated during the light-dependent reactions.
Understanding photosynthesis is crucial for understanding various biological processes, including cellular respiration, plant metabolism, and the global carbon cycle. Additionally, research into artificial photosynthesis has potential applications in renewable energy production and environmental remediation.
Heterotrophic processes refer to the metabolic activities carried out by organisms that cannot produce their own food and have to obtain energy by consuming other organisms or organic substances. These organisms include animals, fungi, and most bacteria. They obtain energy by breaking down complex organic molecules from their environment using enzymes, a process known as respiration or fermentation. The end products of this process are often carbon dioxide, water, and waste materials. This is in contrast to autotrophic processes, where organisms (like plants) synthesize their own food through photosynthesis.
Phototrophic processes refer to the metabolic pathways used by certain organisms, such as plants, algae, and some bacteria, to convert light energy into chemical energy. This is primarily achieved through a process called photosynthesis, where these organisms use light, usually from the sun, to convert carbon dioxide and water into glucose and oxygen. The glucose serves as an energy source for the organism, while the oxygen is released as a byproduct. This process is fundamental to life on Earth as it provides the majority of the oxygen in our atmosphere and forms the base of many food chains.
I'm sorry for any confusion, but "Hydrogen" is not a medical term. It is a chemical element with the symbol H and atomic number 1. It is the lightest and most abundant chemical element in the universe, making up about 75% of its elemental mass.
In a medical context, hydrogen can be discussed in terms of molecular hydrogen (H2) which has been studied for potential therapeutic benefits. Some research explores its use as an antioxidant and anti-inflammatory agent, but more studies are needed to confirm these effects and understand the mechanisms behind them.
Cyanothece
Extracellular polymeric substance
Cyanobacteria
Crocosphaera watsonii
Bacterial circadian rhythm
Hoek, Mann and Jahns system
Streamlining theory
Synechocystis
Synechocystis sp. PCC 6803
Pentapeptide repeat
Secondary chromosome
Nitrogen fixation
Diazotroph
List of MeSH codes (B03)
Cyanothece - Wikipedia
Regulon of Zur in Cyanothece sp. ATCC 51142
Domain combinations for gap ,103190, gap ,158472,55781,55781,58104 superfamilies in Cyanothece sp. PCC 8801
Names from Index Nominum Algarum
Cyanobacterial blooms | Nature Reviews Microbiology
Frontiers | Ecological Interactions of Cyanobacteria and Heterotrophs Enhances the Robustness of Cyanobacterial Consortium for...
Publications | www.ibmc.up.pt
Publications | www.ibmc.up.pt
Chelsea Technologies in Academia
Index Nominum Algarum: names of algae
Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review [PeerJ]
CDD Conserved Protein Domain Family: terB like
Komenda, Josef | Algatech
Browse
Browse
DeCS
EffectiveDB
halotolerant
GZMB - Göttinger Zentrum für molekulare Biowissenschaften
INSTITUTE OF PARASITOLOGY | Profil
Vol. 9 No. 5 (2021): October | International Journal of Aquatic Biology
Pre GI: Gene
Gene locus Report for: 9chro-a3it90
2HADH knowledgebase
Raeid Abed - Research output - Sultan Qaboos University House of Expertise
Zur: Cyanobacteria
Global antibodies
Pre GI: CDS description
Pesquisa | Biblioteca Virtual em Saúde
ATCC2
- They grouped five of the six major Cyanothece strains (PCC 7424, PCC 7822, ATCC 51142, PCC 8801, PCC 8802) as belonging to a single clade, but had Cyanothece sp PCC 7425 branched off earlier. (wikipedia.org)
- Proteome analyses of strains ATCC 51142 and PCC 7822 of the diazotrophic cyanobacterium Cyanothece sp. (bvsalud.org)
74251
- Unlike some other Cyanothece strains, Cyanothece 7425 appears to be an obligate autotroph. (up.ac.za)
Cyanobacterium3
- A widespread bloom of the unicellular cyanobacterium Cyanothece sp. (sasm.org.za)
- Temporal patterns and intra- and inter-cellular variability in carbon and nitrogen assimilation by the unicellular cyanobacterium Cyanothece sp. (cas.cz)
- To date, the proposed mechanisms of nitrogenase-driven photosynthetic H2 production by the diazotrophic unicellular cyanobacterium Cyanothece sp. (pnnl.gov)
Cyanobacteria2
- Cyanothece is a genus of unicellular, diazotrophic, oxygenic photosynthesizing cyanobacteria. (wikipedia.org)
- In 1976, Jiří Komárek defined the prokaryotic cyanobacteria genus Cyanothece as distinct from Synechococcus NAG 1949. (wikipedia.org)
Strains1
- Three Cyanothece strains, sp. (wikipedia.org)
Putative1
- CCY0110 Putative uncharacterized protein , 9chro-a3ip12 Cyanothece sp. (inrae.fr)
Respiration1
- To provide the anoxic environment needed by nitrogenase, Cyanothece boosts its respiration as night begins by using its glycogen stores while turning off photosynthesis. (wikipedia.org)
Characterization2
- Production and characterization of extracellular carbohydrate polymer from Cyanothece sp. (up.pt)
- Characterization of Lipoxygenases from Cyanothece sp. (uni-goettingen.de)
Species2
- While Synechococcus species are usually cylindrical, Cyanothece species are normally oval and longer than 3 μm. (wikipedia.org)
- species= Cyanothece sp. (lbl.gov)
Nitrogen3
- During nitrogen-fixing conditions, Cyanothece creates inclusion storage bodies under the control of a circadian rhythm. (wikipedia.org)
- The rate of oxygen created by photosystem II is much higher when Cyanothece does not fix nitrogen (when the medium is nitrogen-replete). (wikipedia.org)
- Cyanothece balances the production of oxygen through photosynthesis and oxygen-sensitive nitrogen fixation and fermentation all in one cell. (wikipedia.org)
Production2
511423
- They grouped five of the six major Cyanothece strains (PCC 7424, PCC 7822, ATCC 51142, PCC 8801, PCC 8802) as belonging to a single clade, but had Cyanothece sp PCC 7425 branched off earlier. (wikipedia.org)
- 3CSX: Structural characterization of a protein in the DUF683 family- crystal structure of cce_0567 from the cyanobacterium Cyanothece 51142. (rcsb.org)
- Proteome analyses of strains ATCC 51142 and PCC 7822 of the diazotrophic cyanobacterium Cyanothece sp. (bvsalud.org)
74241
- Unlike some other Cyanothece strains, Cyanothece 7424 appears to be an obligate autotroph. (up.ac.za)
Cyanobacteria Cyanothece sp1
- The effects of different light-dark cycles on the metabolism of the diazotrophic, unicellular cyanobacteria Cyanothece sp. (bvsalud.org)
0117291
- NC_011729: Cyanothece sp. (up.ac.za)
Unicellular1
- Cyanothece is a genus of unicellular, diazotrophic, oxygenic photosynthesizing cyanobacteria. (wikipedia.org)
Genus1
- In 1976, Jiří Komárek defined the prokaryotic cyanobacteria genus Cyanothece as distinct from Synechococcus NAG 1949. (wikipedia.org)
Synechococcus1
- While Synechococcus species are usually cylindrical, Cyanothece species are normally oval and longer than 3 μm. (wikipedia.org)
Photosynthesis2
- Cyanothece balances the production of oxygen through photosynthesis and oxygen-sensitive nitrogen fixation and fermentation all in one cell. (wikipedia.org)
- To provide the anoxic environment needed by nitrogenase, Cyanothece boosts its respiration as night begins by using its glycogen stores while turning off photosynthesis. (wikipedia.org)
Inclusion1
- During nitrogen-fixing conditions, Cyanothece creates inclusion storage bodies under the control of a circadian rhythm. (wikipedia.org)
Proteins2
Report1
- Tax_name Report for: Cyanothece sp. (inrae.fr)