Chromosomes
Chromosome Mapping
Plants, Genetically Modified
Plant Leaves
Plant Proteins
Chromosome Banding
Staining of bands, or chromosome segments, allowing the precise identification of individual chromosomes or parts of chromosomes. Applications include the determination of chromosome rearrangements in malformation syndromes and cancer, the chemistry of chromosome segments, chromosome changes during evolution, and, in conjunction with cell hybridization studies, chromosome mapping.
X Chromosome
Chromosome Aberrations
Plant Roots
Sex Chromosomes
The homologous chromosomes that are dissimilar in the heterogametic sex. There are the X CHROMOSOME, the Y CHROMOSOME, and the W, Z chromosomes (in animals in which the female is the heterogametic sex (the silkworm moth Bombyx mori, for example)). In such cases the W chromosome is the female-determining and the male is ZZ. (From King & Stansfield, A Dictionary of Genetics, 4th ed)
Chromosomes, Human, Pair 1
Chromosomes, Human
Chromosomes, Plant
Chromosomes, Bacterial
Chromosomes, Human, Pair 7
Chromosomes, Human, Pair 11
Plant Extracts
Chromosomes, Human, Pair 17
Chromosomes, Human, Pair 6
Chromosomes, Human, Pair 9
Chromosomes, Human, Pair 21
Chromosomes, Fungal
Chromosomes, Human, 6-12 and X
Plants, Medicinal
Chromosomes, Human, Pair 2
Chromosomes, Human, Pair 16
Chromosomes, Human, Pair 22
Chromosomes, Mammalian
Chromosomes, Human, Pair 13
Plant Development
Chromosomes, Human, Pair 4
Chromosomes, Human, Pair 10
Chromosomes, Human, Y
Chromosomes, Human, Pair 8
Chromosomes, Human, Pair 19
Chromosomes, Artificial, Bacterial
Chromosome Disorders
Chromosomes, Human, X
Chromosomes, Human, 1-3
Chromosome Painting
A technique for visualizing CHROMOSOME ABERRATIONS using fluorescently labeled DNA probes which are hybridized to chromosomal DNA. Multiple fluorochromes may be attached to the probes. Upon hybridization, this produces a multicolored, or painted, effect with a unique color at each site of hybridization. This technique may also be used to identify cross-species homology by labeling probes from one species for hybridization with chromosomes from another species.
Chromosomes, Human, Pair 12
Chromosomes, Human, Pair 5
Chromosomes, Human, Pair 15
Chromosomes, Human, Pair 14
Chromosomes, Human, Pair 18
In Situ Hybridization, Fluorescence
Chromosomes, Human, 16-18
Chromosomes, Human, Pair 20
Chromosomes, Artificial, Yeast
Chromosomes in which fragments of exogenous DNA ranging in length up to several hundred kilobase pairs have been cloned into yeast through ligation to vector sequences. These artificial chromosomes are used extensively in molecular biology for the construction of comprehensive genomic libraries of higher organisms.
Plant Stems
Genetic Linkage
Chromosomes, Human, 13-15
Chromosome Breakage
Chromosomes, Human, 21-22 and Y
Base Sequence
Arabidopsis
Genetic Markers
Chromosome Inversion
Chromosome Positioning
Chromosomes, Human, 4-5
Plants, Edible
An organism of the vegetable kingdom suitable by nature for use as a food, especially by human beings. Not all parts of any given plant are edible but all parts of edible plants have been known to figure as raw or cooked food: leaves, roots, tubers, stems, seeds, buds, fruits, and flowers. The most commonly edible parts of plants are FRUIT, usually sweet, fleshy, and succulent. Most edible plants are commonly cultivated for their nutritional value and are referred to as VEGETABLES.
Mutation
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
X Chromosome Inactivation
Centromere
Plant Growth Regulators
Amino Acid Sequence
Phenotype
Meiosis
Translocation, Genetic
Hybrid Cells
Arabidopsis Proteins
Mitosis
Chromosomes, Human, 19-20
Recombination, Genetic
Aneuploidy
The chromosomal constitution of cells which deviate from the normal by the addition or subtraction of CHROMOSOMES, chromosome pairs, or chromosome fragments. In a normally diploid cell (DIPLOIDY) the loss of a chromosome pair is termed nullisomy (symbol: 2N-2), the loss of a single chromosome is MONOSOMY (symbol: 2N-1), the addition of a chromosome pair is tetrasomy (symbol: 2N+2), the addition of a single chromosome is TRISOMY (symbol: 2N+1).
Metaphase
Crosses, Genetic
Plant Immunity
Tobacco
Microsatellite Repeats
Lod Score
Pedigree
Alleles
Evolution, Molecular
Plant Epidermis
Angiosperms
Members of the group of vascular plants which bear flowers. They are differentiated from GYMNOSPERMS by their production of seeds within a closed chamber (OVARY, PLANT). The Angiosperms division is composed of two classes, the monocotyledons (Liliopsida) and dicotyledons (Magnoliopsida). Angiosperms represent approximately 80% of all known living plants.
Models, Genetic
Species Specificity
The restriction of a characteristic behavior, anatomical structure or physical system, such as immune response; metabolic response, or gene or gene variant to the members of one species. It refers to that property which differentiates one species from another but it is also used for phylogenetic levels higher or lower than the species.
Multigene Family
A set of genes descended by duplication and variation from some ancestral gene. Such genes may be clustered together on the same chromosome or dispersed on different chromosomes. Examples of multigene families include those that encode the hemoglobins, immunoglobulins, histocompatibility antigens, actins, tubulins, keratins, collagens, heat shock proteins, salivary glue proteins, chorion proteins, cuticle proteins, yolk proteins, and phaseolins, as well as histones, ribosomal RNA, and transfer RNA genes. The latter three are examples of reiterated genes, where hundreds of identical genes are present in a tandem array. (King & Stanfield, A Dictionary of Genetics, 4th ed)
Cloning, Molecular
DNA
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
Plant Stomata
Nucleic Acid Hybridization
Widely used technique which exploits the ability of complementary sequences in single-stranded DNAs or RNAs to pair with each other to form a double helix. Hybridization can take place between two complimentary DNA sequences, between a single-stranded DNA and a complementary RNA, or between two RNA sequences. The technique is used to detect and isolate specific sequences, measure homology, or define other characteristics of one or both strands. (Kendrew, Encyclopedia of Molecular Biology, 1994, p503)
Blotting, Southern
Genotype
Nondisjunction, Genetic
Kinetochores
Telomere
Chromosomes, Artificial, Human
Polymerase Chain Reaction
In vitro method for producing large amounts of specific DNA or RNA fragments of defined length and sequence from small amounts of short oligonucleotide flanking sequences (primers). The essential steps include thermal denaturation of the double-stranded target molecules, annealing of the primers to their complementary sequences, and extension of the annealed primers by enzymatic synthesis with DNA polymerase. The reaction is efficient, specific, and extremely sensitive. Uses for the reaction include disease diagnosis, detection of difficult-to-isolate pathogens, mutation analysis, genetic testing, DNA sequencing, and analyzing evolutionary relationships.
Zea mays
Seeds
Chromosome Walking
A technique with which an unknown region of a chromosome can be explored. It is generally used to isolate a locus of interest for which no probe is available but that is known to be linked to a gene which has been identified and cloned. A fragment containing a known gene is selected and used as a probe to identify other overlapping fragments which contain the same gene. The nucleotide sequences of these fragments can then be characterized. This process continues for the length of the chromosome.
Chromosomal Proteins, Non-Histone
Sequence Alignment
The arrangement of two or more amino acid or base sequences from an organism or organisms in such a way as to align areas of the sequences sharing common properties. The degree of relatedness or homology between the sequences is predicted computationally or statistically based on weights assigned to the elements aligned between the sequences. This in turn can serve as a potential indicator of the genetic relatedness between the organisms.
Spindle Apparatus
Chromosomal Instability
Lycopersicon esculentum
Polyploidy
Triticum
Haplotypes
Sequence Analysis, DNA
Chromosome Fragility
DNA, Satellite
Highly repetitive DNA sequences found in HETEROCHROMATIN, mainly near centromeres. They are composed of simple sequences (very short) (see MINISATELLITE REPEATS) repeated in tandem many times to form large blocks of sequence. Additionally, following the accumulation of mutations, these blocks of repeats have been repeated in tandem themselves. The degree of repetition is on the order of 1000 to 10 million at each locus. Loci are few, usually one or two per chromosome. They were called satellites since in density gradients, they often sediment as distinct, satellite bands separate from the bulk of genomic DNA owing to a distinct BASE COMPOSITION.
Repetitive Sequences, Nucleic Acid
Sequences of DNA or RNA that occur in multiple copies. There are several types: INTERSPERSED REPETITIVE SEQUENCES are copies of transposable elements (DNA TRANSPOSABLE ELEMENTS or RETROELEMENTS) dispersed throughout the genome. TERMINAL REPEAT SEQUENCES flank both ends of another sequence, for example, the long terminal repeats (LTRs) on RETROVIRUSES. Variations may be direct repeats, those occurring in the same direction, or inverted repeats, those opposite to each other in direction. TANDEM REPEAT SEQUENCES are copies which lie adjacent to each other, direct or inverted (INVERTED REPEAT SEQUENCES).
Diploidy
Plant Poisoning
DNA Probes
Species- or subspecies-specific DNA (including COMPLEMENTARY DNA; conserved genes, whole chromosomes, or whole genomes) used in hybridization studies in order to identify microorganisms, to measure DNA-DNA homologies, to group subspecies, etc. The DNA probe hybridizes with a specific mRNA, if present. Conventional techniques used for testing for the hybridization product include dot blot assays, Southern blot assays, and DNA:RNA hybrid-specific antibody tests. Conventional labels for the DNA probe include the radioisotope labels 32P and 125I and the chemical label biotin. The use of DNA probes provides a specific, sensitive, rapid, and inexpensive replacement for cell culture techniques for diagnosing infections.
Plant Transpiration
Genes
Drosophila melanogaster
DNA Primers
Plant Tumors
DNA-Binding Proteins
Plasmids
Heterozygote
Gene Deletion
Chromatids
Either of the two longitudinally adjacent threads formed when a eukaryotic chromosome replicates prior to mitosis. The chromatids are held together at the centromere. Sister chromatids are derived from the same chromosome. (Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
DNA, Complementary
Sequence Homology, Nucleic Acid
Mosaicism
Gene Dosage
The number of copies of a given gene present in the cell of an organism. An increase in gene dosage (by GENE DUPLICATION for example) can result in higher levels of gene product formation. GENE DOSAGE COMPENSATION mechanisms result in adjustments to the level GENE EXPRESSION when there are changes or differences in gene dosage.
Saccharomyces cerevisiae
Cell Nucleus
Within a eukaryotic cell, a membrane-limited body which contains chromosomes and one or more nucleoli (CELL NUCLEOLUS). The nuclear membrane consists of a double unit-type membrane which is perforated by a number of pores; the outermost membrane is continuous with the ENDOPLASMIC RETICULUM. A cell may contain more than one nucleus. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
DNA Transposable Elements
Discrete segments of DNA which can excise and reintegrate to another site in the genome. Most are inactive, i.e., have not been found to exist outside the integrated state. DNA transposable elements include bacterial IS (insertion sequence) elements, Tn elements, the maize controlling elements Ac and Ds, Drosophila P, gypsy, and pogo elements, the human Tigger elements and the Tc and mariner elements which are found throughout the animal kingdom.
Polymorphism, Genetic
The regular and simultaneous occurrence in a single interbreeding population of two or more discontinuous genotypes. The concept includes differences in genotypes ranging in size from a single nucleotide site (POLYMORPHISM, SINGLE NUCLEOTIDE) to large nucleotide sequences visible at a chromosomal level.
Cell Cycle Proteins
Proteins that control the CELL DIVISION CYCLE. This family of proteins includes a wide variety of classes, including CYCLIN-DEPENDENT KINASES, mitogen-activated kinases, CYCLINS, and PHOSPHOPROTEIN PHOSPHATASES as well as their putative substrates such as chromatin-associated proteins, CYTOSKELETAL PROTEINS, and TRANSCRIPTION FACTORS.
Polytene Chromosomes
Escherichia coli
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
Prophase
Interphase
Transcription, Genetic
Genetic Complementation Test
Transformation, Genetic
Cosmids
Polymorphism, Restriction Fragment Length
Chromatin
Hybridization, Genetic
Loss of Heterozygosity
Cytogenetic Analysis
Genome, Human
Cytogenetics
Sequence Tagged Sites
Short tracts of DNA sequence that are used as landmarks in GENOME mapping. In most instances, 200 to 500 base pairs of sequence define a Sequence Tagged Site (STS) that is operationally unique in the human genome (i.e., can be specifically detected by the polymerase chain reaction in the presence of all other genomic sequences). The overwhelming advantage of STSs over mapping landmarks defined in other ways is that the means of testing for the presence of a particular STS can be completely described as information in a database.
Karyotype
Gene Rearrangement
Nuclear Proteins
Fabaceae
The large family of plants characterized by pods. Some are edible and some cause LATHYRISM or FAVISM and other forms of poisoning. Other species yield useful materials like gums from ACACIA and various LECTINS like PHYTOHEMAGGLUTININS from PHASEOLUS. Many of them harbor NITROGEN FIXATION bacteria on their roots. Many but not all species of "beans" belong to this family.
Genes, Dominant
Chromosome Fragile Sites
Specific loci that show up during KARYOTYPING as a gap (an uncondensed stretch in closer views) on a CHROMATID arm after culturing cells under specific conditions. These sites are associated with an increase in CHROMOSOME FRAGILITY. They are classified as common or rare, and by the specific culture conditions under which they develop. Fragile site loci are named by the letters "FRA" followed by a designation for the specific chromosome, and a letter which refers to which fragile site of that chromosome (e.g. FRAXA refers to fragile site A on the X chromosome. It is a rare, folic acid-sensitive fragile site associated with FRAGILE X SYNDROME.)
Transcription Factors
Poaceae
Sex Chromosome Disorders
Biomass
Monosomy
Haploidy
Spermatocytes
A new FISH protocol with increased sensitivity for physical mapping with short probes in plants. (1/1662)
Fluorescence in situ hybridization (FISH) is a well-established technique used for the detection of specific DNA regions, that has been applied to interphase nuclei, pachytene and metaphase chromosomes as well as to extended DNA fibres. This technique allows the physical mapping of specific DNA sequences both on individual chromosomes and extended fibres. A new FISH protocol is described here that enhances the sensitivity of the method. Probes for small unique DNA sequences of less than 2 kb give high signal-to-noise ratio with this method, and can be visualized easily by means of conventional fluorescence microscopy. (+info)Quantitative trait loci for component physiological traits determining salt tolerance in rice. (2/1662)
Rice (Oryza sativa) is sensitive to salinity, which affects one-fifth of irrigated land worldwide. Reducing sodium and chloride uptake into rice while maintaining potassium uptake are characteristics that would aid growth under saline conditions. We describe genetic determinants of the net quantity of ions transported to the shoot, clearly distinguishing between quantitative trait loci (QTL) for the quantity of ions in a shoot and for those that affect the concentration of an ion in the shoot. The latter coincide with QTL for vegetative growth (vigor) and their interpretation is therefore ambiguous. We distinguished those QTL that are independent of vigor and thus directly indicate quantitative variation in the underlying mechanisms of ion uptake. These QTL independently govern sodium uptake, potassium uptake, and sodium:potassium selectivity. The QTL for sodium and potassium uptake are on different linkage groups (chromosomes). This is consistent with the independent inheritance of sodium and potassium uptake in the mapping population and with the mechanistically different uptake pathways for sodium and potassium in rice under saline conditions (apoplastic leakage and membrane transport, respectively). We report the chromosomal location of ion transport and selectivity traits that are compatible with agronomic needs and we indicate markers to assist selection in a breeding program. Based upon knowledge of the underlying mechanisms of ion uptake in rice, we argue that QTL for sodium transport are likely to act through the control of root development, whereas QTL for potassium uptake are likely to act through the structure or regulation of membrane-sited transport components. (+info)The Arabidopsis eer1 mutant has enhanced ethylene responses in the hypocotyl and stem. (3/1662)
By screening for enhanced ethylene-response (eer) mutants in Arabidopsis, we isolated a novel recessive mutant, eer1, which displays increased ethylene sensitivity in the hypocotyl and stem. Dark-grown eer1 seedlings have short and thick hypocotyls even in the absence of added ethylene. This phenotype is suppressed, however, by the ethylene biosynthesis inhibitor 1-aminoethoxyvinyl-glycine. Following ethylene treatment, the dark-grown eer1 hypocotyl response is greatly exaggerated in comparison with the wild type, indicating that the eer1 phenotype is not simply due to ethylene overproduction. eer1 seedlings have significantly elevated levels of basic-chitinase expression, suggesting that eer1 may be highly sensitive to low levels of endogenous ethylene. Adult eer1 plants display exaggerated ethylene-dependent stem thickening, which is an ethylene response previously unreported in Arabidopsis. eer1 also has enhanced responsiveness to the ethylene agonists propylene and 2,5-norbornadiene. The eer1 phenotype is completely suppressed by the ethylene-insensitive mutation etr1-1, and is additive with the constitutive ethylene-response mutation ctr1-3. Our findings suggest that the wild-type EER1 product acts to oppose ethylene responses in the hypocotyl and stem. (+info)The molecular genetic linkage map of the model legume Medicago truncatula: an essential tool for comparative legume genomics and the isolation of agronomically important genes. (4/1662)
BACKGROUND: The legume Medicago truncatula has emerged as a model plant for the molecular and genetic dissection of various plant processes involved in rhizobial, mycorrhizal and pathogenic plant-microbe interactions. Aiming to develop essential tools for such genetic approaches, we have established the first genetic map of this species. Two parental homozygous lines were selected from the cultivar Jemalong and from the Algerian natural population (DZA315) on the basis of their molecular and phenotypic polymorphism. RESULTS: An F2 segregating population of 124 individuals between these two lines was obtained using an efficient manual crossing technique established for M. truncatula and was used to construct a genetic map. This map spans 1225 cM (average 470 kb/cM) and comprises 289 markers including RAPD, AFLP, known genes and isoenzymes arranged in 8 linkage groups (2n = 16). Markers are uniformly distributed throughout the map and segregation distortion is limited to only 3 linkage groups. By mapping a number of common markers, the eight linkage groups are shown to be homologous to those of diploid alfalfa (M. sativa), implying a good level of macrosynteny between the two genomes. Using this M. truncatula map and the derived F3 populations, we were able to map the Mtsym6 symbiotic gene on linkage group 8 and the SPC gene, responsible for the direction of pod coiling, on linkage group 7. CONCLUSIONS: These results demonstrate that Medicago truncatula is amenable to diploid genetic analysis and they open the way to map-based cloning of symbiotic or other agronomically-important genes using this model plant. (+info)The molecular characterization of maize B chromosome specific AFLPs. (5/1662)
The origin and evolution of B chromosomes could be explained by the specific DNA sequence on them. But the specific sequences known were quite limited. To investigate maize B chromosome sqicific DNA sequeces, maize genomes with and without B chromosomes were analyzed by AFLP. Only 5 markers were found specific to genomes with B chromosomes among about 2000 AFLP markers. Southern hybridization and sequence analysis revealed that only the sequence of M8-2D was a B chromosome specific sequence. This sequence contained the telomeric repeat unit AGG (+info)Maize tertiary trisomic stocks derived from B-A translocations. (6/1662)
Reciprocal translocations between supernumerary B chromosomes and the basic complement of A chromosomes in maize have resulted in a powerful set of tools to manipulate the dosage of chromosomal segments. From 15 B-A reciprocal translocation stocks that have the B-A chromosome genetically marked we have developed tertiary trisomic stocks. Tertiary trisomics are 2n + 1 aneuploids where the extra chromosome is a translocation element, in this case a B-A chromosome. Whereas B-A translocations produce aneuploidy in the sperm, the tertiary trisomic plant efficiently transmits hyperploid gametes maternally. Because the B-A tertiary trisomic stocks and the B-A translocation stocks from which they were derived are introgressed into the W22 inbred line, the effects of maternally and paternally transmitted trisomic B-A chromosomes can be compared. Data are presented on both the male and female transmission rates of the B-A chromosomes in the tertiary trisomic stocks. (+info)Physical and genetic mapping in the grasses Lolium perenne and Festuca pratensis. (7/1662)
A single chromosome of the grass species Festuca pratensis has been introgressed into Lolium perenne to produce a diploid monosomic substitution line 2n = 2x = 14. In this line recombination occurs throughout the length of the F. pratensis/L. perenne bivalent. The F. pratensis chromosome and recombinants between it and its L. perenne homeologue can be visualized using genomic in situ hybridization (GISH). GISH junctions represent the physical locations of sites of recombination, enabling a range of recombinant chromosomes to be used for physical mapping of the introgressed F. pratensis chromosome. The physical map, in conjunction with a genetic map composed of 104 F. pratensis-specific amplified fragment length polymorphisms (AFLPs), demonstrated: (1) the first large-scale analysis of the physical distribution of AFLPs; (2) variation in the relationship between genetic and physical distance from one part of the F. pratensis chromosome to another (e.g., variation was observed between and within chromosome arms); (3) that nucleolar organizer regions (NORs) and centromeres greatly reduce recombination; (4) that coding sequences are present close to the centromere and NORs in areas of low recombination in plant species with large genomes; and (5) apparent complete synteny between the F. pratensis chromosome and rice chromosome 1. (+info)A molecular cytogenetic map of sorghum chromosome 1. Fluorescence in situ hybridization analysis with mapped bacterial artificial chromosomes. (8/1662)
We used structural genomic resources for Sorghum bicolor (L.) Moench to target and develop multiple molecular cytogenetic probes that would provide extensive coverage for a specific chromosome of sorghum. Bacterial artificial chromosome (BAC) clones containing molecular markers mapped across sorghum linkage group A were labeled as probes for fluorescence in situ hybridization (FISH). Signals from single-, dual-, and multiprobe BAC-FISH to spreads of mitotic chromosomes and pachytene bivalents were associated with the largest sorghum chromosome, which bears the nucleolus organizing region (NOR). The order of individual BAC-FISH loci along the chromosome was fully concordant to that of marker loci along the linkage map. In addition, the order of several tightly linked molecular markers was clarified by FISH analysis. The FISH results indicate that markers from the linkage map positions 0.0-81.8 cM reside in the short arm of chromosome 1 whereas markers from 81.8-242.9 cM are located in the long arm of chromosome 1. The centromere and NOR were located in a large heterochromatic region that spans approximately 60% of chromosome 1. In contrast, this region represents only 0.7% of the total genetic map distance of this chromosome. Variation in recombination frequency among euchromatic chromosomal regions also was apparent. The integrated data underscore the value of cytological data, because minor errors and uncertainties in linkage maps can involve huge physical regions. The successful development of multiprobe FISH cocktails suggests that it is feasible to develop chromosome-specific "paints" from genomic resources rather than flow sorting or microdissection and that when applied to pachytene chromatin, such cocktails provide an especially powerful framework for mapping. Such a molecular cytogenetic infrastructure would be inherently cross-linked with other genomic tools and thereby establish a cytogenomics system with extensive utility in development and application of genomic resources, cloning, transgene localization, development of plant "chromonomics," germplasm introgression, and marker-assisted breeding. In combination with previously reported work, the results indicate that a sorghum cytogenomics system would be partially applicable to other gramineous genera. (+info)
lucas-small - Making Chromosomes Count
101091924 1037645939984899 8788473037260324864 n - Making Chromosomes Count
CCDB server - Chromosome Counts Database
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Holocentric chromosome
In plants it has also been suggested that the diffuse kinetochore of holocentric chromosomes may suppress the meiotic drive of ... Holocentric chromosomes have evolved several times during both animal and plant evolution, and are currently reported in about ... In plants, holocentric chromosomes have been found in zygnematophycean algae, in the genera Myristica (Myristicaceae), ... The presence of holocentric chromosomes has been up till now assessed in about 800 species, including insects, plants, ...
List of organisms by chromosome count
The list of organisms by chromosome count describes ploidy or numbers of chromosomes in the cells of various plants, animals, ... Animals Plants Other Eukaryotes Karyotype of a human being. It shows 22 homologous autosomal chromosome pairs, both the female ... Kondo K (May 1969). "Chromosome Numbers of Carnivorous Plants". Bulletin of the Torrey Botanical Club. 96 (3): 322-328. doi: ... As other non-human extant hominidae have 48 chromosomes it is believed that the human chromosome 2 is the result of the merging ...
Polytene chromosome
1] (87A&C Heat-shock puffs) [2] (High resolution spreads) Phaseolus Polytene chromosomes (Plants) (CS1 maint: uses authors ... Polytene chromosomes were first reported by E.G.Balbiani in 1881. Polytene chromosomes are found in dipteran flies: the best ... Polytene chromosomes are large chromosomes which have thousands of DNA strands. They provide a high level of function in ... Carvalheira, Gianna Maria Griz (2000). "Plant polytene chromosomes". Genetics and Molecular Biology. 23 (4): 1043-1050. doi: ...
Non-random segregation of chromosomes
Transmission of B chromosomes has also been studied in various grasshoppers. As in plants, it was found that the number of B ... In such cases, one does not speak of X and Y chromosomes, but of Z and W chromosomes. Males have two Z chromosomes (ZZ), ... There are two different X chromosomes and no Y chromosome (X1X20), and in meiosis I both X chromosomes are assigned to the same ... Much more numerous are studies on additional chromosomes, the B chromosomes, which show no homology with regular chromosomes ...
Sex-chromosome dosage compensation
Silene latifolia plants are also either male (XY) or female (XX), with the Y chromosome being smaller, with fewer genes ... of the Y chromosome during meiosis. Additionally, 10-25% of human X chromosome genes, and 3-7% of mouse X chromosome genes ... Additionally, in plant species that lack dimorphic sex chromosomes, dosage compensation can occur when aberrant meiotic events ... Meadows, R (2012). "Sex chromosome equality in plants". PLOS Biology. 10 (4): e1001312. doi:10.1371/journal.pbio.1001312. PMC ...
Chromosome 9 open reading frame 43
No orthologs have been found in invertebrate or plant species. C9orf43 divergence is moderate based on the molecular clock ... Chromosome 9 open reading frame 43 is a protein that in humans is encoded by the C9orf43 gene. The gene is also known as ... "Entrez Gene: Chromosome 9 open reading frame 43". Butland SL, Devon RS, Huang Y, Mead CL, Meynert AM, Neal SJ, Lee SS, ... C9orf43 is located on the long arm of chromosome 9 at 9q32 and is expressed on the positive strand. The genomic sequence starts ...
Eukaryotic chromosome structure
Scientists also discovered plant and animal cells have a central compartment called the nucleus. They soon realized chromosomes ... males have both an X chromosome and a Y chromosome instead of a pair of X chromosomes as seen in females). Each chromosome ... Compared to prokaryotic chromosomes, eukaryotic chromosomes are much larger in size and are linear chromosomes. Eukaryotic ... "Eukaryotic Chromosome Structure". www.ndsu.edu. Retrieved 15 September 2014. "Structure of Chromosomes Revealed." University of ...
Monocentric chromosome
Holocentric chromosomes are found throughout the plant and animal kingdoms such as the nematode Caenorhabditis elegans. ... The monocentric chromosome is a chromosome that has only one centromere in a chromosome and forms a narrow constriction. ... Monocentric chromosomes as compared to holocentric chromosomes where the entire length of the chromosome acts as the centromere ... Holocentric chromosomes do have an evolutionary advantage by preventing the loss of chromosome after a DNA double-strand break ...
Chromosome landing
... a paradigm for map-based gene cloning in plants with large genomes". Trends in Genetics. 11 (2): 63-68. doi:10.1016/S0168-9525( ... without any need for chromosome walking and its associated problems. Chromosome landing, together with the technology that has ... From the abstract of PMID 7716809: The strategy of chromosome walking is based on the assumption that it is difficult and time ... Primer walking Tanksley, Steven D.; Ganal, Martin W.; Martin, Gregory B. (February 1995). "Chromosome landing: ...
Virtual karyotype
The chromosomes. 6th ed, Chapman & Hall, London. p28 Stebbins G.L. 1950. Variation and evolution in plants. Chapter XII: The ... chromosome 1) to smallest (chromosome 22), with the sex chromosomes (X and Y) shown last. Historically, karyotypes have been ... These include: A translocation between chromosomes 9 and 22, known as the Philadelphia chromosome, occurs in about 20% of adult ... Gains on chromosomes 6 and 8 are often used to refine the predictive value of the Monosomy 3 screen, with gain of 6p indicating ...
Plant genome assembly
A plant genome assembly represents the complete genomic sequence of a plant species, which is assembled into chromosomes and ... Next, using the map from the first step the contigs are assembled back into the chromosomes. The first complete plant genome ... 72.8% of the assembled sequences were successfully anchored onto the seven chromosomes. Another plant genome that combined NGS ... Plant Genome DataBase Japan (PGDBj) is a website that contains information related to genomes of model and crop plants from ...
Y chromosome
Such groups include monotremes, Drosophila, some other insects, some fish, some reptiles, and some plants. In Drosophila ... Males have one Y chromosome and one X chromosome, while females have two X chromosomes. In mammals, the Y chromosome contains a ... The chromosome with this allele became the Y chromosome, while the other member of the pair became the X chromosome. Over time ... Only the tips of the Y and X chromosomes recombine. The tips of the Y chromosome that could recombine with the X chromosome are ...
Euchromatin
When visualizing chromosomes, such as in a karyogram, cytogenetic banding is used to stain the chromosomes. Cytogenetic banding ... Atlas of plant and animal histology". mmegias.webs.uvigo.es. Retrieved 2021-12-02. Enukashvily NI (January 2013). "Chapter Two ... Organisation of Chromosomes. Vol. 90. Academic Press. pp. 31-65. doi:10.1016/B978-0-12-410523-2.00002-X. ISBN 9780124105232. ... "Chromosome structure: euchromatin and heterochromatin". International Review of Cytology. Academic Press. 108: 1-60. doi: ...
Eukaryote hybrid genome
Charlesworth D (April 2016). "Plant Sex Chromosomes". Annual Review of Plant Biology. 67 (1): 397-420. doi:10.1146/annurev- ... Most plants, as well as many groups of animals, lack heteromorphic sex chromosomes. The absence of heteromorphic sex ... mitonuclear loci residing on the Z chromosome in hybrid Italian sparrows is consistent with compatible sex chromosomes being ... In the plant Arabidopsis arenosa some of the alleles conferring adaptation to drought and phytotoxic levels of metal have been ...
Euphorbia villosa
Chromosomes 2n=20. It is native to Europe. In the British Isles it has only been identified in England, where it became extinct ... List of extinct plants of the British Isles Natural History Museum London - Hairy Spurge JSTOR - Euphorbia villosa [Erich ... Euphorbia villosa, or hairy spurge, is a species of perennial, herbaceous plant in the family Euphorbiaceae. It grows to a ...
Allium bisotunense
1. Mitotic chromosomes". Plant Systematics and Evolution. 304 (5): 583-606. doi:10.1007/s00606-017-1489-5. ISSN 2199-6881. v t ... "Allium bisotunense R.M.Fritsch , Plants of the World Online , Kew Science". Plants of the World Online. Retrieved 2020-12-05. " ... Like all species in the Melanocrommyum subgenus, this species is known to have 8 chromosomes. In addition, there is a mix of ... Allium bisotunense is a species of flowering plant in the family Amaryllidaceae and is endemic to Iran. They are cultivated in ...
Aniba rosaeodora
It has 24 chromosomes. Gene flow is high between wild populations. The plant is one of the commercially important sources of ... Chapter 4 Rosewood Oil (PDF). Flavours and fragrances of plant origin. Food and Agriculture Organization. 1995. ISBN 92-5- ... Endangered plants, Trees of Brazil, Trees of Colombia, Trees of Ecuador, Trees of French Guiana, Trees of Guyana, Trees of Peru ...
Wisteria
"Join Plant Heritage , Conserving the diversity of garden plants". Baird, Merrily C (2001). Symbols of Japan: Thematic Motifs in ... Both have eight chromosomes. In East Asia and North America there are about nine species of wisteria. In North America, W. ... Some species are popular ornamental plants. The aquatic flowering plant commonly called wisteria or 'water wisteria' is in fact ... Once the plant is a few years old, a relatively compact, free-flowering form can be achieved by pruning off the new tendrils ...
Polyploidy
... six sets of chromosomes) with the common name of bread wheat. Many agriculturally important plants of the genus Brassica are ... Some plants are triploid. As meiosis is disturbed, these plants are sterile, with all plants having the same genetic ... One Thousand Plant Transcriptomes Initiative (2019). "One thousand plant transcriptomes and the phylogenomics of green plants ... Each chromosome pair derived from the Triticum urartu parent is homoeologous to the opposite chromosome pair derived from the ...
Kathleen Bever Blackburn
Prior to these discoveries by her and others it had not been realised that plants had sex chromosomes. The fact that X and Y ... Blackburn, K. B. (1923). "Sex chromosomes in plants". Nature. 112 (2819): 687-688. Bibcode:1923Natur.112..687B. doi:10.1038/ ... Blackburn, K. B.; Heslop-Harrison, J. W. (1924). "A Preliminary Account of the Chromosomes and Chromosome Behaviour in the ... and established that female and male flowers of these plants had X and Y sex chromosomes (Blackburn 1923, 1924). She was the ...
Oryzomys couesi
The X chromosome is either acrocentric, with a long and a short arm, or subtelocentric, with a long and a vestigial arm. The ... In 24 hours, male Texas O. couesi move up to 153 m (502 ft) and females up to 126 m (413 ft). The diet includes both plant ... It has 56 chromosomes. There is much geographic variation in size, proportions, color, and skull features. Oryzomys couesi is ... An omnivore, it eats both plant and animal food, including seeds and insects. It breeds throughout the year; females give birth ...
Callerya
... is a genus of flowering plants in the legume family, Fabaceae. It belongs to the subfamily Faboideae. Genetic analysis ... Both have eight chromosomes. "Callerya". Taxonomy Browser. National Center for Biotechnology Information. Retrieved 2010-01-01 ...
Chromosome 1 open reading frame 194
An ortholog was found within invertebrates, bacteria, plants, fish, amphibians, reptiles, birds, marsupials, placental mammals ... Chromosome 1 open reading frame 194 (C1orf194) is a gene from Homo sapiens. The function of the protein coded by the gene is ... "C1orf194 chromosome 1 open reading frame 194 [Homo sapiens (human)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-02-19 ... KIAA1324 is the closest gene neighbor to C1orf194 located 86bp from the start of C1orf194 on the non-sense strand of chromosome ...
Sex determination in Silene
Biologists have found that sex chromosomes in plants originated from pairs of autosomes. As these chromosomes diverge from ... A few, such as S. colpophylla, possess homomorphic sex chromosomes. Plants with sex-determining chromosomes, like Silene, can ... Ming, Ray; Bendahmane, Abdelhafid; Renner, Susanne S. (2011-01-01). "Sex chromosomes in land plants". Annual Review of Plant ... Moore, R. C.; Harkess, A. E.; Weingartner, L. A. (2016-07-01). "How to be a seXY plant model: A holistic view of sex-chromosome ...
Iris damascena
... plant), Plants described in 1966, Garden plants, Flora of Western Asia, Flora of Syria). ... A 1977 analysis of the genome of 47 species of Oncocyclus irises showed that the species has a chromosome count of 2n=20. The ... David Gledhill The Names of Plants, p. 133, at Google Books Stearn, William (1973). A Gardenerer's Dictionary of Plant Names ( ... It should be planted in March, then dug up in September or October and stored in wood shavings. The plants can be harmed by ...
Prophase
Plant cells do not have centrosomes and the chromosomes can nucleate microtubule assembly into the mitotic apparatus. In plant ... but utilizing the technology on plant cells was originally difficult due to the high degree of chromosome compaction in plant ... Fluorescent stains such as DAPI can be used in both live plant and animal cells. These stains do not band chromosomes, but ... In both animal and plant cells chromosomes may de-condense during telophase I requiring them to re-condense in prophase II.: ...
Iris barnumiae subsp. demawendica
... plant), Flora of Central Asia, Flora of Iran, Plants described in 1950, Garden plants of Asia, Plant subspecies). ... As most irises are diploid, having two sets of chromosomes, this can be used to identify hybrids and classification of ... They are best re-planted in late September when temperatures are low and humidity is also low. This is also when the plants ... It is hardy (in UK), when planted in a south-facing border, at the base of a wall. In winter, it must not have its roots in ...
Sarracenia
Kondo, Katsuhiko (May 1969). "Chromosome Numbers of Carnivorous Plants" (PDF). Bulletin of the Torrey Botanical Club. 96 (3): ... Examination of the U.S. Pitcher-plant Trade With a Focus on the White-topped Pitcher-plant. Traffic Bulletin. Excerpts, Vol. 17 ... Some efforts have been made to curb the existing threats to plants. In 2003 the International Carnivorous Plant Society ran a ... Another challenge is maintaining all of the introduced plant material and determining an optimal site to plant them in. A ...
Encelia
... is a genus of the plant family Asteraceae. It consists of shrubs (and one geophyte) of arid environments in ... All have n = 18 chromosomes. All the North American species are obligate outcrossers. In cultivation, the species readily form ... Encelia species are used as food plants by the larvae of some Lepidoptera species including the leaf miner Bucculatrix enceliae ...
Susanne Renner
Ming, Ray; Bendahmane, Abdelhafid; Renner, Susanne S. (2011-06-02). "Sex Chromosomes in Land Plants". Annual Review of Plant ... She has also worked on dioecy and sex chromosomes in plants. The use of genetic tools enables Renner to track the movement of ... "Plant sex chromosomes defy evolutionary models - The Source - Washington University in St. Louis". The Source. 2021-04-23. ... Renner, Susanne S. (2005). "Relaxed molecular clocks for dating historical plant dispersal events". Trends in Plant Science. 10 ...
Geogenanthus poeppigii
Plant Encyclopedia "Seersucker Plant". Plant Encyclopedia. 11 March 2011. Faden, R. B. (1981). "Peperomia peoppigii Miq.; A ... All members of the subtribe share a similar karyotype of 19 large chromosomes. The genus Geogenanthus is distinguished by a ... The surface as a whole has a "puckered" appearance; hence the common name seersucker plant. This plant is particularly unique ... The stem of the plant is covered in minute brown hairs and, underground, plants possess a short, branching rhizome. This ...
Dudleya cymosa subsp. pumila
The majority of the plants in this species are diploid (n = 17), meaning they have two sets of chromosomes. Some plants found ... A variable plant, in some localities it is difficult to distinguish from other plants in the genus. The plant has diamond to ... A plant with two inflorescences Plant with inflorescences Detail of the inflorescence Multiple rosettes on a shady ledge A ... Plants with the eggs are usually in exposed areas, rather than partial shade. Once the larvae emerge from the eggs, they burrow ...
Solanum arcanum
The wild tomato is a perennial plant, woody at the base, being up to 1 metre (3.3 ft) or more in diameter and up to 1m tall. ... Chromosome number: n=12. It is found in coastal and inland Andean valleys in northern Peru (between 100 and 2,500 metres (330 ... Plant Physiology. 143 (2): 1044-54. doi:10.1104/pp.106.089615. PMC 1803715. PMID 17172289. (Articles with short description, ... Short description matches Wikidata, Articles with 'species' microformats, Solanum, Endemic flora of Peru, Plants described in ...
Auxin binding protein
"Molecular analysis of an auxin binding protein gene located on chromosome 4 of Arabidopsis". Plant Cell. 4 (2): 193-201. doi: ... This article incorporates text from the public domain Pfam and InterPro: IPR000526 (Plant proteins). ... coding for a putative receptor for the plant hormone auxin". EMBO J. 8 (9): 2453-61. PMC 401229. PMID 2555179. Palme K, Hesse T ...
Genomic imprinting
... and flowering plants. Imprinting of whole chromosomes has been reported in mealybugs (Genus: Pseudococcus) and a fungus gnat ( ... Alleman M, Doctor J (June 2000). "Genomic imprinting in plants: observations and evolutionary implications". Plant Molecular ... on mouse chromosome 17 and KCNQ1OT1 on human chromosome 11p15.5, have been shown to be essential for the imprinting of genes in ... but do depend on which parent the chromosome originated from. This group of epigenetic changes that depend on the chromosome's ...
Genome size
In animals they range more than 3,300-fold, and in land plants they differ by a factor of about 1,000. Protist genomes have ... I. DNA-content and chromosome sets in various species of Cyprinidae". Humangenetik. 7 (3): 240-244. doi:10.1007/BF00273173. ... Bennett MD, Leitch IJ (2005). "Genome size evolution in plants". In T.R. Gregory (ed.). The Evolution of the Genome. San Diego ... Animal Genome Size Database Plant DNA C-values Database Fungal Genome Size Database Fungal Database Archived 2008-03-10 at the ...
Myriopteris tomentosa
"Plants Profile for Cheilanthes tomentosa (woolly lipfern)". plants.usda.gov. Retrieved 22 June 2016. Cobb, Farnsworth & Lowe ... The triploid sporophyte has a chromosome number of 90. Reproduction is apogamous: triploid spores are formed by mitosis, rather ... Christenhusz, Maarten J. M.; Fay, Michael F.; Byng, James W. (2018). Plant Gateway's the Global Flora: A practical flora to ... Plants described in 1833, Myriopteris, Ferns of Mexico, Taxa named by Johann Heinrich Friedrich Link). ...
Immigration to Brazil
In the last five years, millions of hectares have been newly planted in Brazil. Growth has been especially high in Central ... Carvalho-Silva, DR; Santos, FR; Rocha, J; Pena, SD (January 2001). "The Phylogeography of Brazilian Y-Chromosome Lineages". ...
Lepidium coronopus
The chemotaxonomy of the plant was completed in 2008. It's chromosome count is 2n = 32. It has a few common names including ' ... It is a low, to short prostrate plant, with often several from base, stems that sprawl, trail or spread, and very rarely ... Other differences between the two plants include; l. didymum has 2 stamens while L. coronopus has 6 and the fruits are very ... Later as the Lepidium species was formed, Ihsan Ali Al-Shehbaz then published the plant as Lepidium coronopus in 'Novon' Vol.14 ...
Marija Edita Šolić
Šolić graduated biology on 24 August 1980 with thesis "Significant Biokovo plants with special emphasis on their protection" ... Mediterranean chromosome data - 27. Flora Mediterranea 27, 295-301 "In memoriam: Dr. sc. Marija s. Edita Šolić, dobitnica ... as well as live and herbaria plant collections. On 26 September 1972 at the Department of Biology, Faculty of Science, ...
Iris songarica
... plant), Flora of Central Asia, Flora of China, Flora of Iran, Flora of Mongolia, Flora of Pakistan, Garden plants of Asia, ... It has a chromosome count: 2n=20. It was also counted as 2n=22, 44 by (Zahareva and Makeushenko 1968) and (Fedorov 1969). It is ... Eastop Aphids on the World's Herbaceous Plants and Shrubs, p. 553, at Google Books Czerepanov, S. K. 1995. Vascular plants of ... The multiple flowering plants were originally called Iris songarica var. multiflora, but this has been classified as a synonym ...
Eupatorium novae-angliae
More recent analysis of chromosomes reveals that the New England plants do not appear to be closely related to E. leucolepis. ... USDA, NRCS (n.d.). "Eupatorium novae-angliae". The PLANTS Database (plants.usda.gov). Greensboro, North Carolina: National ... The International Plant Names Index "Eupatorium leucolepis". Flora of North America. ... Plants described in 1937, Flora without expected TNC conservation status). ...
Paeonia delavayi
In lower plants, woody parts may not be present above ground. Like all diploid peonies, it has ten chromosomes (2n=10). The ... Garden plants, Flora of China, Plants described in 1892). ... Plants have creeping stolons and the roots are thick because ... Paeonia delavayi has been listed as endangered by the China Plant Red Data Book, and may be under threat if digging out roots ... Planting tree peonies in a sheltered position may help to prevent strong winds from breaking branches, particularly during ...
Iris schelkownikowii
Also handling the plant may cause a skin irritation or an allergic reaction. "Iris schelkownikowii (Fomin) Fomin - The Plant ... It has a chromosome count of 2n=20. It was originally described as Iris acutiloba var. schelkownicowii by A.V. Fomin in 1904. ... Plant Science Research Division Plant Inventory, Issues 81-100 (1925), p. 7, at Google Books Royal Horticultural Society ... plant), Plants described in 1907, Flora of Azerbaijan, Flora of the Transcaucasus). ...
Mitochondrial DNA
Some plant species have enormous mitochondrial genomes, with Silene conica mtDNA containing as many as 11,300,000 base pairs. ... Medusozoa and calcarea clades however have species with linear mitochondrial chromosomes. In terms of base pairs, the anemone ... Type 2, type 3 and type 5 mentioned in the plant and fungal genomes also exist in some protists, as do two unique genome types ... There are three different mitochondrial genome types found in plants and fungi. The first type is a circular genome that has ...
Bumblebee
Only fertilised queens can lay diploid eggs (one set of chromosomes from a drone, one from the queen) that mature into workers ... Enhancing the wild bee population can be done by the planting of wildflower strips, and in New Zealand, bee nesting boxes have ... Wikibooks has a book on the topic of: Beekeeping/Plants_for_Bumblebees Bumblebees of the world - find species by region, ... Bumblebee workers can lay unfertilised haploid eggs (with only a single set of chromosomes) that develop into viable male ...
Iris variegata
The plant is held in place by removing half the leaf mass to reduce wind rock and by using the old roots as anchors in the soil ... It has a chromosome count: 2n=24. It is commonly known as the 'Hungarian iris'. It is known as 'skäggiris' in Swedish. It was ... Garden plants of Europe, Plants described in 1753, Taxa named by Carl Linnaeus). ... Vascular plants of Russia and adjacent states (the former USSR). Komarov, V. L. et al., eds. 1934-1964. Flora SSSR. Mathew, B. ...
Cell cycle
... , Chromosomes and Cancer. Vol. 15. Miami Beach, FL: University of Miami School of Medicine. Alter O, Golub GH ( ... In cells with nuclei (eukaryotes, i.e., animal, plant, fungal, and protist cells), the cell cycle is divided into two main ... In this checkpoint, the cell checks to ensure that the spindle has formed and that all of the chromosomes are aligned at the ... Thus, during this phase, the amount of DNA in the cell has doubled, though the ploidy and number of chromosomes are unchanged. ...
Dianthus broteri
Reut". Plants of the World Online. Board of Trustees of the Royal Botanic Gardens, Kew. 2017. Retrieved 16 August 2020. Balao, ... Dianthus broteri is a complex of polyploid races, with 2n=2x=30, 2n=4x=60, 2n=6x=90 and 2n=12x=180 chromosomes detected in ... Dianthus broteri is a species of flowering plant in the carnation family Caryophyllaceae. It is native to Portugal and Spain, ... Plants described in 1852, Flora of Portugal, Flora of Spain, Taxa named by Pierre Edmond Boissier, Taxa named by George ...
Symphyotrichum defoliatum
USDA, NRCS (2014). "Symphyotrichum defoliatum". The PLANTS Database (plants.usda.gov). Greensboro, North Carolina: National ... Symphyotrichum defoliatum is an allopolyploid species likely derived from the backcrossing of S. falcatum (chromosome base ... Symphyotrichum defoliatum is a perennial herbaceous plant growing from a long rhizome to a maximum height of 150 centimeters (5 ... POWO (2021). "Symphyotrichum defoliatum (Parish) G.L.Nesom". Plants of the World Online. Royal Botanic Gardens, Kew. Retrieved ...
Ajuga pyramidalis
It is a native plant in Europe. Pyramidal bugle is a perennial, herbaceous plant growing from about 5 to 20 cm (2 to 8 in) tall ... The chromosome number is 2n = 32. The bracts in the inflorescence form effective shelters for the flowers from rain, their red- ... N.P (2002). "Plants and People of Nepal". {{cite journal}}: Cite journal requires ,journal= (help) "Medicinal use of Ajuga ... Ajuga pyramidalis, commonly known as pyramidal bugle, is a flowering plant of the genus Ajuga in the family Lamiaceae. ...
Short interspersed nuclear element
... in higher plants". The Plant Journal. 101 (3): 681-699. doi:10.1111/tpj.14567. PMID 31610059. Scarpato M, Angelini C, Cocca E, ... The chromosome has a very complex and hierarchical system of organizing the genome. This system of organization, which includes ... Changes in chromosome structure influence gene expression primarily by affecting the accessibility of genes to transcriptional ... Furthermore, the shape and density of certain areas of a chromosome can affect the shape and density of neighboring (or even ...
Iron overload
Non-heme iron is not as easily absorbed in the human system and is found in plant-based foods such as grains, beans, vegetables ... The gene responsible for hereditary hemochromatosis (known as HFE gene) is located on chromosome 6; the majority of hereditary ... Most humans who lived at that time were foragers and their diets consisted largely of game, fish and wild plants. ...
Rachelia glaria
Plants of the World Online , Kew Science". Plants of the World Online. Retrieved 19 January 2022. Ward, J.M.; Breitwieser, I.; ... It has a chromosome no. = 2n=28. The genus name of Rachelia is in honour of Rachel Chisholm, born Kevern (1915-2017), New ... Mabberley, D.J. 2008: Mabberley's plant book, a portable dictionary of plants, their classification and uses. Edition 3. ... The Latin specific epithet of glaria refers to the habitat (of the plant) and it is derived from the stem of "glara", meaning " ...
FAM18B1
It is located on Chromosome 17 at 18,684,582-18,710,026, and the most common mRNA has 7 exons. This gene encode a protein of ... LOC51030 is highly conserved in chordates and also shows conservation in eukaryotes, including fungi and plants. ... The gene is found on chromosome 17 on the cytogenetic band 17p11.2. This gene has two paralog in the human genome, LOC201158, ... which is located on chromosome 17 at 17p12, and TVP23A, which is located on chromosome 16. The duplication appears to have ...
Japan Academy Prize (academics)
Organization and Molecular Evolution of Plant Organellar Genomes and Sex Chromosomes -Insights from the Case of the Liverwort ... Molecular Biology of Plant Virus RNA Genomes and its Application to Agriculture Hiroshi Okamoto - Studies on Experimental ... Regulation of Cell Cycle and Chromosome Segregation Noboru Karashima - History and Society in South India: The Cholas to ...
NAD+ kinase
NAD kinases in plants and sea urchin eggs have also been found to bind calmodulin. Due to the essential role of NADPH in lipid ... Genes on human chromosome 1, EC 2.7.1, Cellular respiration, Metabolism). ... "Differential activation of NAD kinase by plant calmodulin isoforms. The critical role of domain I". The Journal of Biological ...
Sitobion miscanthi
It is a true bug and sucks sap from cereal plants, making it a pest of wheat production. It has also been recorded as a pest of ... "A chromosome-level draft genome of the grain aphid Sitobion miscanthi". GigaScience. 8 (8). doi:10.1093/gigascience/giz101. PMC ...
Asplenium bradleyi
Hybrid plants, Plants described in 1873, Ferns of the United States). ... A. × wherryi showed the same pattern, as it also contains chromosomes from both of those species. A specimen of A. stotleri was ... While A. bradleyi is easily outcompeted by other plants in more fertile habitats, it is well adapted to the thin, acidic soil ... These microsites are too small for most other vascular plants to survive, except for a few other spleenworts. Some mosses and ...
Analysis of Chromosome Information | 13 | Plant Chromosomes | Kiichi F
This chapter describes the flow of a chromosome analysis using an IBAS (Zeiss/Kontron) image analyzer. NIH Image is constructed ... The chapter also describes a basic image analysis procedure for plant chromosomes to obtain the density distribution of a ... This chapter describes the flow of a chromosome analysis using an IBAS (Zeiss/Kontron) image analyzer. NIH Image is constructed ... The application of image technology to human chromosome research began in the 1960s as diagnostic demands increased. Automatic ...
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana
... was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. The ... Arabidopsis thaliana is an important model system for plant biologists. In 1996 an international collaboration (the Arabidopsis ... Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana Nature. 2000 Dec 14;408(6814):820-2. doi: 10.1038/ ... arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. This chromosome encodes ...
CHROMEX - CHROMosome and Plant Cell Division in Space EXperiment
Koeltz Botanical Books. Goldblatt:Index Plant Chromosome Numbers
Index to plant chromosome numbers 1988 - 1989. 1991.(Monogr. Syst. Bot., 40). 238 p. gr8vo. Paper bd. ... Index to plant chromosome numbers 2004 - 2006. Publ. 2010. (Regnum Vegetabile, 152). 256 p. gr8vo. Paper bd. (978-3-906166-89-6 ... Index to plant chromosome numbers 2001 - 2003. Publ. 2006. (Monographs in Systematic Botany, Volume 106). 242 p. gr8vo. Paper ... Index to plant chromosome numbers 1996 - 1997. 2000. (Monographs in Systematic Botany from the Missouri Botanical Garden, 81). ...
Pathways for making unisexual flowers and unisexual plants: Moving beyond the "two mutations linked on one chromosome" model
PDF] Chromosome numbers, nuclear DNA content, and polyploidy in Consolea (Cactaceae), an endemic cactus of the Caribbean...
Polyploidy, an important mechanism of plant evolution, was investigated in Consolea, an endemic Caribbean opuntioid genus ... Standard chromosome counting and flow cytometric analyses were used to determine chromosome numbers and ploidy of each taxon. ... Male and female sexual morphs had similar DNA content, suggesting that there are no sex chromosomes. Cytomixis between cells ... In conclusion, C-DNA content and chromosome number separated Consolea species into two groups, which may correspond to two ...
Hi-C 2.0: An Optimized Hi-C Procedure for High-Resolution Genome-Wide Mapping of Chromosome Conformation | bioRxiv
Hi-C 2.0: An Optimized Hi-C Procedure for High-Resolution Genome-Wide Mapping of Chromosome Conformation. Houda Belaghzal, Job ... Hi-C 2.0: An Optimized Hi-C Procedure for High-Resolution Genome-Wide Mapping of Chromosome Conformation ... Hi-C 2.0: An Optimized Hi-C Procedure for High-Resolution Genome-Wide Mapping of Chromosome Conformation ... Hi-C 2.0: An Optimized Hi-C Procedure for High-Resolution Genome-Wide Mapping of Chromosome Conformation ...
DNA and Chromosomes
Binding of H3K4me3 by a plant homeodomain (PHD) in RAG-2 induces conformational changes in RAG-1, allosterically stimulating ... This includes homology search, DNA strand invasion, repair DNA synthesis, and restoration of intact chromosomes. Aspects of DNA ... allosteric transmission of histone H3 Lys-4 trimethylation to the recombinase RAG-1 are separable functions of the RAG-2 plant ... and Dmc1 form specialized presynaptic filaments that are adapted for performing recombination between homologous chromosomes. ...
PPT - Crosses and Chromosomes PowerPoint Presentation, free download - ID:2225943
Crosses and Chromosomes. Do Now ( dihybrid cross) In fruit flies, red eyes are dominant to white, and wings are dominant to no ... Dihybrid Gametes • Pea plant cross: PpYy x PpYy • Gametes: reproductive haploid cells (sperm and egg) • One individual ... Chromosomes and DNA - . each chromosome contains a long strand of dna body cells contain 23 pairs of chromosomes. ... Chromosomes and Inheritance - . autosomes vs. sex chromosomes. autosomes = the pairs of chromosomes that are the same in ...
Chromosomes, DNA and Genes: Tiny Things That Have a Huge Effect on Who We Are! - Windows to the Universe
Each animal or plant has two alleles of each gene. One allele is inherited from its mother and the other is inherited from its ... Heredity is the passage of DNA from the chromosomes of one generation to the chromosomes of the next. Chromosomes in your body ... Chromosomes are the keepers of the genetic material in eukaryotic cells. An organism has the same chromosomes for its entire ... One chromosome of each pair came from your mother and one from your father. There are many genes within each chromosome. ...
Plant extracts induce chromosome aberrations and sister-chromatid exchanges in Chinese hamster ovary cells and human...
title = "Plant extracts induce chromosome aberrations and sister-chromatid exchanges in Chinese hamster ovary cells and human ... T1 - Plant extracts induce chromosome aberrations and sister-chromatid exchanges in Chinese hamster ovary cells and human ... Plant extracts induce chromosome aberrations and sister-chromatid exchanges in Chinese hamster ovary cells and human ... Plant extracts induce chromosome aberrations and sister-chromatid exchanges in Chinese hamster ovary cells and human ...
Biologist who employed microscope in their work? - Answers
Genetics - Latest research and news | Nature
Tree peony (Paeonia ostii) has the largest chromosome of any sequenced plants to date. Here, the authors assemble its genome ... Maize root system architecture improvement for high-density planting Nature Plants, 1-2 ... A draft chromosome-scale genome assembly of a commercial sugarcane *Jeremy R. Shearman ... Genomic basis of the giga-chromosomes and giga-genome of tree peony Paeonia ostii ...
Centranthus ruber
For vascular plants occurring in wildlands or otherwise outside of cultivation in California, the Jepson eFlora contains ... Chromosomes: 2n=14. Ecology: Disturbed places, rock or wall crevices, roadsides; Elevation: < 1500 m. Bioregional Distribution: ... Index of California Plant Names (ICPN; linked via the Jepson Online Interchange). List of species Centranthus ruber. ... Habit: Plant glabrous, glaucous; base generally woody. Stem: decumbent to erect, simple or branched, 3--9 dm, hollow. Leaf: 5-- ...
A high-quality chromosome-level Eutrema salsugineum genome, an extremophile plant model. | BMC Genomics;24(1): 174, 2023 Apr...
A high-quality chromosome-level Eutrema salsugineum genome, an extremophile plant model. ... A high-quality chromosome-level Eutrema salsugineum genome, an extremophile plant model. ... is an attractive model to study abiotic stress tolerance in plants. Two versions of E. salsugineum genomes that previously ... genome using long-read sequencing and chromosome conformation capture data. We generated Oxford Nanopore long reads at high ...
PRIME PubMed | Identification of the chromosome complement and the spontaneous 1R/1V translocations in allotetraploid Secale...
Identification of the chromosome complement and the spontaneous 1R/1V translocations in allotetraploid Secale cereale × ... Chromosome BandingChromosomes, PlantCytogeneticsDNA, PlantDNA, RibosomalGenome, PlantHybridization, GeneticPoaceaeSecale ... Introduction of chromosome segment carrying the seed storage protein genes from chromosome 1V of Dasypyrum villosum showed ... In addition we analyse rye chromosome pairs using FISH with chromosome-specific DNA sequences on S. cereale × D. villosum ...
Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana<...
Tabata, S., & Klein Lankhorst, R. M. (2000). Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Nature, ... Tabata, S. ; Klein Lankhorst, R.M. / Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. In: Nature. 2000 ... Tabata, S & Klein Lankhorst, RM 2000, Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana, Nature, vol. ... Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. / Tabata, S.; Klein Lankhorst, R.M. ...
PDF) Combinatorial genomic data refute the human chromosome 2 evolutionary fusion and build a model of functional design for...
Jeffrey Tomkins published Combinatorial genomic data refute the human chromosome 2 evolutionary fusion and build a model of ... University, an M.S. in Plant Science from the University of Idaho, ... to maintain chromosome stability. Centromeres are specic regions of chromosomes that play an important role in the assembly of ... tripeptidyl peptidase 1 (TPP1) gene on chromosome 11. The fth Tomkins ◀Interstitial telomeres and chromosome 2 fusion ▶ 2018 ...
Development of Agrobacterium tumefaciens Infilt...
Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant...
Neanderthals wore make-up and liked to chat | New Scientist
Bustards may use plants to treat STIs during the breeding season. Male great bustards seek out two toxic plants during the ... The chromosome may contain regions that promote their DNAs spread by killing sperm that carry Y chromosomes. However, Y ... Genetically modified tobacco plant produces cocaine in its leaves * A 48,500-year-old virus has been revived from Siberian ... Ukraines nuclear plants face uncertain future after Russian attacks * Bluewalker 3 satellite is brighter than 99.8 per cent of ...
Plants | Free Full-Text | Nematicidal Activity of the Endophyte Serratia ureilytica against Nacobbus aberrans in Chili Plants ...
... egg masses and reproduction factor produced by Nacobbus aberrans in Chili plants, with respect to the control where this ... plants, animals, invertebrates, and humans. Some species of this genus have antifungal, antibacterial, and nematicidal activity ... Na, plants inoculated only with the nematode; Nematicide, plants with Nemacur®; plants with the bacteria at different ... Na, plants inoculated only with the nematode; Nematicide, plants with Nemacur®; plants with the bacteria at different ...
The EPA National Library Catalog | EPA National Library Network | US EPA
Talking Glossary of Genetic Terms | NHGRI
In plants and animals (including humans), chromosomes reside in the nucleus of cells. Humans have 22 pairs of numbered ... X Chromosome. The X chromosome is one of the two sex chromosomes that are involved in sex determination. Humans and most other ... Y Chromosome. The Y chromosome is one of the two sex chromosomes that are involved in sex determination. Humans and most other ... Sex Chromosome. A sex chromosome is a type of chromosome involved in sex determination. Humans and most other mammals have two ...
Scientist Search Results | HHMI
Genetic Analysis Reveals Evolution of the Enigmatic Y Chromosome in Great Apes
Plants and animals in the process of macro-evolution would be unfit for survival. For example, "if a leg of a reptile were to ... The Y chromosome is also unusual because, unlike most chromosomes it doesnt have a matching partner. We each get two copies of ... "Having the ancestral great ape Y chromosome helps us to understand how the chromosome evolved," said Vegesna. "For example, we ... get two X chromosomes and some of us (males) get one X and one Y. Partner chromosomes can exchange sections in a process called ...
Knowledge of Chromosomes Founded Synthetic Species | Science News
Page 7: Mgr. Petr Šmarda, Ph.D. - Publications | Faculty of Science MU
GC Content in Plant Genomes BUREŠ Petr ŠMARDA Petr HRALOVÁ Ivana FUNES-SORIANO Sara LYSÁK Martin ŘEPKA Radomír HELÁNOVÁ Klára ... Genome size variation in species with holokinetic chromosomes (Cyperaceae) HRALOVÁ Ivana BUREŠ Petr ROTREKLOVÁ Olga ŠMARDA Petr ... Is GC-content Correlated with Genome Size in Plants BUREŠ Petr ŠMARDA Petr HRALOVÁ Ivana HELÁNOVÁ Klára FUENTES-SORIANO Sara ... Correlation between GC content ond genome size in plants BUREŠ Petr ŠMARDA Petr HRALOVÁ Ivana FUENTES-SORIANO Sara LYSÁK Martin ...
GenesGeneSpeciesHumansGenomicGeneticsGenome assemblyArabidopsisDifferent chromosomesAberrationsComplementEvolutionaryNucleusABSTRACTPlasmidsHomologousOrganismGeneticPairs of autosomesPolyploidyMitosis2022OrganismsCentromereAcrocentricSequenceConformationTetraploidMeiosisEvolutionPathogenGreat apesCondensationHumanFlow cytometryPairAllelesVitroCyperaceaeCellBiologyPolyploidDeletionHeredityFungi1993DominantCells1996BehaviorSequencesAmplificationCharacteristics
Genes24
- This chromosome encodes 5,220 of the roughly 25,500 predicted protein-coding genes in the genome. (nih.gov)
- Chromosomes, DNA and Genes: Tiny Things That Have a Huge Effect on Who We Are! (windows2universe.org)
- There are many genes within each chromosome. (windows2universe.org)
- Here, the authors assemble its genome and reveal the association of a list of candidate genes with fatty acid biosynthesis and the possible contribution of transposon and histone expansion to maintain the giga-chromosomes. (nature.com)
- The 5,874 genes encoded on chromosome 5 reveal several new functions in plants, and the patterns of gene organization provide insights into the mechanisms and extent of genome evolution in plants. (wur.nl)
- human chromosome 2 are situated inside active genes negating the idea of fusion. (researchgate.net)
- The Y chromosome is important for male fertility and contains the genes critical for sperm production, but it is often neglected in genomic studies because it is so difficult to sequence and assemble," said Monika Cechova, a graduate student at Penn State at the time of the research and co-first author of the paper. (scitechdaily.com)
- Structure of genes and chromosomes. (berkeley.edu)
- Identifying genes on each chromosome is an active area of genetic research. (medlineplus.gov)
- Because researchers use different approaches to predict the number of genes on each chromosome, the estimated number of genes varies. (medlineplus.gov)
- Chromosome 1 likely contains 2,000 to 2,100 genes that provide instructions for making proteins. (medlineplus.gov)
- Researchers have identified several possible tumor suppressor genes in the deleted region of chromosome 1, and more research is needed to understand what role these genes play in neuroblastoma development. (medlineplus.gov)
- A chromosome consists of a long strand of DNA containing many genes. (genome101.com)
- A human chromosome can have up to 500 million base pairs of DNA with thousands of genes. (genome101.com)
- In eukaryotes (such as animals, plants, and fungi ), genes are contained within the cell nucleus. (genome101.com)
- The characterized genes have proposed functions involved in plant defense and stress, energy and metabolism, protein transport, replication, and RNA binding. (globalrust.org)
- Chromosomal distributions revealed that the highest number of SOD genes was on chromosomes 1 and 10, with 2 members on each. (tubitak.gov.tr)
- The results of this study contribute to a better understanding of SOD genes and proteins in plants, especially in Sorghum taxa. (tubitak.gov.tr)
- Additionally, some disorders are brought on by recessive genes on the X chromosome and are more inclined to affect males, since males have just one X chromosome and thus do not have a dominant replica of the allele. (millsranch.net)
- "Cannabis labeling is instead probably driven primarily by a small number of key terpenes whose concentrations contribute to the characteristic aromas commonly associated with Sativa and Indica and whose variation we genetically mapped to tandem arrays of terpene synthase genes on chromosomes 5 and 6. (hightimes.com)
- By combining the data collected by the developed method and DNA analysis, we identified genes related to the vegetation fraction at four locations on the chromosome. (go.jp)
- The 84 PbbZIP genes were all located in the nucleus, and 77 of those genes were unevenly distributed across the 17 chromosomes of white pear. (scielo.org)
- Also artificially constructing genes could lead to solution to world hunger: Clone the same cabbage plant a hundred times and you could feed an entire community with just one gene. (blurtit.com)
- Polymorphisms in the 2q33 and 3q21 chromosome regions including T-cell coreceptor and ligand genes may influence susceptibility to pemphigus foliaceus. (cdc.gov)
Gene18
- Each animal or plant has two alleles of each gene. (windows2universe.org)
- Autosomal" means that the gene in question is located on one of the numbered, or non-sex, chromosomes. (genome.gov)
- Using genome editing techniques, I evaluate the effect of targeted gene expression levels on the shoot formation capabilities of plant protoplasts. (weigelworld.org)
- The resistance gene Yr34 that controlled stripe rust in WAWHT2046 was 12.2 cM distal to the awn inhibitor B1 in chromosome 5AL (Bariana et al. (globalrust.org)
- The deletion in chromosome 1 involved in TAR syndrome eliminates at least 200,000 DNA building blocks (200 kilobases, or 200 kb) from the long (q) arm of the chromosome, including a gene called RBM8A . (medlineplus.gov)
- MIC-3 is a recently identified gene family shown to exhibit increased root-specific expression following nematode infection of cotton plants that are resistant to root-knot nematode. (tamu.edu)
- More papers have been published on unintended outcomes and risks of gene editing in medical research on human and animal cells and laboratory animals, compared with plants. (gmwatch.org)
- Moreover, the problems found with human and animal gene editing are increasingly being confirmed in plant gene editing. (gmwatch.org)
- A More Intuitive Phytozome Interface Phytozome v13 now hosts upwards of 250 plant genomes and provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse interfaces they have come to rely on, with a more intuitive interface. (doe.gov)
- gene, unit of hereditary information that occupies a fixed position (locus) on a chromosome. (genome101.com)
- Analysis revealed deletion of DNA fragments with collinear gene order on chromosomes 1A, 2D, 5A, 5B, 5D and 7D of Chara HII mutants. (globalrust.org)
- T0 and T1 plants have been obtained and confirmed for the gene of interest. (globalrust.org)
- At the University of Michigan, Janaki focused on plant cytology ,the study of genetic composition and patterns of gene expression in plants. (atomstalk.com)
- Accordingly, several ongoing projects are aiming to identify and monitor the effects of different anthropogenic pressures on natural ecosystems, including the evaluation of the biological effects of genotoxic contaminants, on several sentinel species within the Qatari coastal waters, at the gene, chromosome and cell level. (edu.qa)
- Here, a chromosome-length genome sequence assembly and related gene predictions for the red raspberry cultivar 'Anitra' are presented, comprising PacBio long read sequencing scaffolded using Hi-C sequence data. (nibio.no)
- The first step in dna splicing is to locate a specific gene of interest on a chromosome. (web.app)
- In other words, if you had a gene for down syndrome, the genetically modified anti-biotic could mutate the malice chromosome into something less harmfull. (blurtit.com)
- Studies have identified a gene on chromosome 22 encoding for apolipoprotein L1 (APOL1) which has been associated with a variety of nephropathies. (cdc.gov)
Species19
- Polyploidy, an important mechanism of plant evolution, was investigated in Consolea, an endemic Caribbean opuntioid genus represented by nine subdioecious species with very narrow distributions, including species classified as rare or threatened. (semanticscholar.org)
- Chromosome counts and male meiosis in two species of Pleurospermum Hoffm. (semanticscholar.org)
- The results suggest a loss of some DNA sequences after polyploidization in these Opuntia species, which provide useful guidelines to set conservation strategies and breeding approaches for these plants with adaptive advantages in arid and semiarid environments. (semanticscholar.org)
- Plants, animals and many other species within the domain Eukaryota are able to make offspring, or young, by sexual reproduction. (windows2universe.org)
- Based on the specific hybridization patterns of ribosomal 5S, 35S DNA and rye species-specific pSc200 DNA probes, a set of genotypes with numerous Secale/Dasypyrum translocations of 1R/1V chromosomes were identified in successive generations of allotetraploid S. cereale × D. villosum hybrids. (unboundmedicine.com)
- Plant species richness in continental southern Siberia: effects of pH and climate in the context of the species pool hypothesis. (muni.cz)
- New analysis of the DNA sequence of the male-specific Y chromosomes from all living species of the great ape family helps to clarify our understanding of how this enigmatic chromosome evolved. (scitechdaily.com)
- A clearer picture of the evolution of the Y chromosome is important for studying male fertility in humans as well as our understanding of reproduction patterns and the ability to track male lineages in the great apes, which can help with conservation efforts for these endangered species. (scitechdaily.com)
- From the comparison, the team was able to clarify patterns of evolution that seem to fit with behavioral differences between the species and reconstruct a model of what the Y chromosome might have looked like in the ancestor of all great apes. (scitechdaily.com)
- We needed the Y chromosome of more great ape species to tease out the details of what was going on. (scitechdaily.com)
- Chromosome numbers of northern plant species. (people.su)
- Also, a haploid chromosome count of x = 17 has been found for nearly all Ruellia species (over 50 spp. (tolweb.org)
- Vicia faba , commonly known as the broad bean , fava bean , or faba bean , is a species of vetch , a flowering plant in the pea and bean family Fabaceae . (wikipedia.org)
- Hidden in small cavities of plants, the inconspicuous colonies of this species are frequently introduced to new habitats by global commerce. (wurmlab.com)
- Algae have a very distinct structure from other species, like plants and mammals. (risingacademy.org)
- Owing to close associations of different chromosomes at their heterochromatic regions, nuclear repatternings consisting of changes in the number and size of the chromocenters may occur with tissue differentiation in plant species. (unipg.it)
- Study of the number, morphology and behavior of chromosomes of local target species. (edu.qa)
- Rubus idaeus L. (red raspberry), is a perennial woody plant species of the Rosaceae family that is widely cultivated in the temperate regions of world and is thus an economically important soft fruit species. (nibio.no)
- The seven chromosome scaffolds were anchored to a previously published genetic linkage map with a high degree of synteny and comparisons to genomes of closely related species within the Rosoideae revealed chromosome-scale rearrangements that have occurred over relatively short evolutionary periods. (nibio.no)
Humans10
- in chromosome numbers between humans and great apes. (researchgate.net)
- In humans, aneuploidy would be any number of chromosomes other than the usual 46. (genome.gov)
- Humans have 22 pairs of autosomes and one pair of sex chromosomes (XX or XY). (genome.gov)
- If you just compare the sequence identity-comparing the As, Ts, Cs, and Gs of the chromosomes-humans are more similar to chimpanzees, as you would expect," said Kateryna Makova, Pentz Professor of Biology at Penn State and one of the leaders of the research team. (scitechdaily.com)
- Dresden and Leipzig researchers find that stem cells in the developing brain of modern humans take longer to divide and make fewer errors when distributing their chromosomes to their daughter cells, compared to those of Neanderthals. (news-medical.net)
- Humans normally have 46 chromosomes in each cell, divided into 23 pairs. (medlineplus.gov)
- Humans, for example, are diploid organisms with just two sets of chromosomes (we inherit one set from our mother and one from our father), but polyploidy is common in both wild and cultivated plants. (nuigalway.ie)
- Humans began applying knowledge of genetics in prehistory with the domestication and breeding of plants and animals. (wikipedia.org)
- We combine both Illumina (short reads) and PacBio (long reads) platforms to achieve whole genome de novo assemblies and re-sequencing for viruses, microbes , plants, animals and humans . (cd-genomics.com)
- The transfer of substances from the environment to plants, animals, and humans. (cdc.gov)
Genomic5
- The new genome assembly will provide a valuable resource for future genomic studies and facilitate comparative genomic analysis with other plants . (bvsalud.org)
- Sometimes cleaved chromosomes do not recover and genomic stability is compromised - which in the long run might promote cancer. (news-medical.net)
- Complex nucleoprotein structures which contain the genomic DNA and are part of the CELL NUCLEUS of PLANTS . (bvsalud.org)
- A set of 56 SNP locus/phenotype associations was identified and the genomic regions harboring these loci were distributed over nine of the 12 eggplant chromosomes. (biomedcentral.com)
- A chromosome-level genomic sequence of R. idaeus will be a valuable resource for the knowledge of its genome structure and function in red raspberry and will be a useful and important resource for researchers and plant breeders. (nibio.no)
Genetics1
- Ongoing work includes integration of information to allow navigation via comparative genomics from genetics loci to chromosome, and development of crop genetics databases. (edu.au)
Genome assembly2
- report a high-quality chromosome-scale genome assembly of Phoebe bournei . (cell.com)
- We generated a chromosome level haplotype-resolved genome assembly with primary assembly of length 739.58 Mb and scaffold N50 of 58.1Mb, an improvement in contiguity in comparison to reference genomes for pedunculate oak ( Q. robur ) (scaffold N50 = 1.35 Mb) and valley oak ( Q. lobata ). (botanyconference.org)
Arabidopsis8
- Arabidopsis thaliana is an important model system for plant biologists. (nih.gov)
- In 1996 an international collaboration (the Arabidopsis Genome Initiative) was formed to sequence the whole genome of Arabidopsis and in 1999 the sequence of the first two chromosomes was reported. (nih.gov)
- The genome of the model plant Arabidopsis thaliana has been sequenced by an international collaboration. (wur.nl)
- it is the second largest Arabidopsis chromosome and represents 21% of the sequenced regions of the genome. (wur.nl)
- Tabata, S & Klein Lankhorst, RM 2000, ' Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana ', Nature , vol. 408, no. 6814, pp. 823-826. (wur.nl)
- Preliminary work focuses on the model plant, Arabidopsis thaliana , and lessons from this are applied to cassava ( Manihot esculenta ), sweet potato ( Ipomoea batatas ), and horned melon ( Cucumis metuliferus ). (weigelworld.org)
- In chapter three I utilise tetraploid plants to investigate for the presence of progressive heterosis in Arabidopsis thaliana. (nuigalway.ie)
- In chapter five I investigate whether the induction of polyploidy, including whether a chromosome set is inherited maternally or paternally, can enhance salt stress tolerance in Arabidopsis thaliana. (nuigalway.ie)
Different chromosomes1
- Mendel's Laws of heredity only work for alleles on different chromosomes. (slideserve.com)
Aberrations2
- Effects of extracts from Vicia faba were compared with those of Zea mays for the induction of sister-chromatid exchanges (SCEs) and of chromosome aberrations (CAs) in Chinese hamster ovary (CHO) cells. (elsevier.com)
- Numerical chromosome aberrations (aneuploidy and polyploidy) are more common among polyploids (e.g. sugarcane, wheat, oats, triticale, potato and banana) than in diploids, since the latter cannot easily tolerate aneuploidy [10]. (fao.org)
Complement1
- Housed inside each flower, the anther produces pollen through a process known as meiosis, which involves cell division that gives rise to a half complement of chromosomes, known as haploidy. (cdc.gov)
Evolutionary3
- We think that this situation could provide the evolutionary pressure to accelerate change on the chimpanzee and bonobo Y chromosome, compared to other apes with different mating patterns, but this hypothesis, while consistent with our findings, needs to be evaluated in subsequent studies. (scitechdaily.com)
- Analysis of the chromosome-scale genome of Phoebe bournei reveals contrasting evolutionary fates of the TPS-a and TPS-b subfamilies. (cell.com)
- In this study, potato CRK ( StCRK ) family members were identified, and their physical and chemical characteristics, evolutionary characteristics, subcellular location, chromosome location and expression patterns were analyzed. (chinacrops.org)
Nucleus3
- The chromosomes are located within each cell nucleus . (windows2universe.org)
- nucleus, chromosomes - basic structure, number. (cbseexpert.com)
- The chromosomes may be seen, and the nucleus is rather massive. (risingacademy.org)
ABSTRACT1
- Abstract Basic leucine zipper (bZIP) is a conserved transcription factor (TF) widely present in eukaryotes, and it plays an important role in regulating plant growth and stress responses. (scielo.org)
Plasmids1
- Instead, their DNA can be found in the cytoplasm in a region called the nucleoid or in circular chromosomes called plasmids. (visiblebody.com)
Homologous3
- The 2 alleles a diploid organism has for a trait are located on 2 homologous chromosomes. (slideserve.com)
- These results, together with previously reported results showing that in some cases sequences homologous to those in T-DNA are present in plant DNA regions adjacent to left recombinational junctions, indicate that sequence homology between the incoming T-DNA and the plant chromosomal DNA has an important function in T-DNA integration. (elsevier.com)
- V. faba has a diploid (2n) chromosome number of 12 (six homologous pairs). (wikipedia.org)
Organism2
- An organism has the same chromosomes for its entire life. (windows2universe.org)
- Polyploidy is when an organism possesses more than two sets of chromosomes. (nuigalway.ie)
Genetic11
- Some characteristics, or traits, result from interactions with the environment, others are determined from the genetic material in your chromosomes. (windows2universe.org)
- Chromosomes are the keepers of the genetic material in eukaryotic cells . (windows2universe.org)
- Although the causes of genetic instability are poorly understood, chromosome instability is believed to be one of the most common causes of tissue culture-induced variation. (fao.org)
- Unfortunately, the use of banana shoot tips as target tissues for genetic engineering strategies such as in vitro mutagenesis and genetic transformation can lead to chimeric plants [3]. (fao.org)
- The term 'somaclonal variation' was introduced to describe the genetic variation in plants regenerated from any form of cell culture. (fao.org)
- 1p36 deletion syndrome is caused by a deletion of genetic material from a specific region in the short (p) arm of chromosome 1. (medlineplus.gov)
- A 1q21.1 microduplication is a copied (duplicated) segment of genetic material at position q21.1 on one of the two copies of chromosome 1 in each cell. (medlineplus.gov)
- My PhD research investigates the genetic and physiological consequences of two different plant breeding phenomena: heterosis and polyploidy. (nuigalway.ie)
- a specific sequence of nucleotides in DNA or RNA that is located usually on a chromosome and that is the functional unit of inheritance controlling the transmission and expression of one or more traits by specifying the structure of a particular polypeptide and especially a protein or controlling the function of other genetic material. (genome101.com)
- Within organisms , genetic information generally is carried in chromosomes , where it is represented in the chemical structure of particular DNA molecules . (wikipedia.org)
- There is now a broad scientific consensus that the current use of the Indica and Sativa labeling is misleading: these labels do not provide reliable information about the genetic or chemical makeup of the plant. (hightimes.com)
Pairs of autosomes1
- pairs of autosomes and 1 pair of sex chromosomes (XY in Institut de Recherche pour le Développement, Montpellier, males, XX in females) (8). (cdc.gov)
Polyploidy2
- PDF] Chromosome numbers, nuclear DNA content, and polyploidy in Consolea (Cactaceae), an endemic cactus of the Caribbean Islands. (semanticscholar.org)
- Aneuploidy and polyploidy have traditionally been detected by chromosome counting in regenerated plants [11,12], but this is a time-consuming and laborious procedure. (fao.org)
Mitosis1
- This was probably due to defects in mitosis and abnormal chromosome segregation as revealed by in situ analysis. (biomedcentral.com)
20221
- Plants 2022, 11, 2997. (gmwatch.org)
Organisms2
- Mechanistic aspects of RNA silencing are remarkably well conserved among organisms as diverse as protists, fungi, plants and animals, indicating that it has important functions. (biomedcentral.com)
- As for diploid or polyploid organisms, we generally assemble one set of chromosomes. (cd-genomics.com)
Centromere3
- The two largest (13.5 and 9.2 Mb) correspond to the top (long) and the bottom (short) arms of chromosome 3, and the two small contigs are located in the genetically defined centromere. (nih.gov)
- Analysis of the sequence of chromosome 5 yields further insights into centromere structure and the sequence determinants of heterochromatin condensation. (wur.nl)
- We propose a working hypothesis in which RNAi would be involved in heterochromatin formation at the centromere and therefore in chromosome segregation. (biomedcentral.com)
Acrocentric3
- Five pairs are acrocentric chromosomes and one pair is metacentric . (wikipedia.org)
- The two largest macrochromosome pairs as well as the Z (female) chromosome are submetacentric, while the third-largest chromosome pair is acrocentric and the fourth-largest is metacentric. (thainationalparks.com)
- The W chromosomes are acrocentric too, as are the larger microchromosomes, the smaller ones probably being telocentric. (thainationalparks.com)
Sequence7
- The sequence of the last three chromosomes and an analysis of the whole genome are reported in this issue. (nih.gov)
- Here we present the sequence of chromosome 3, organized into four sequence segments (contigs). (nih.gov)
- Here we report the complete sequence of chromosome 5. (wur.nl)
- The sequence of chromosomes 2 and 4 have been reported previously and that of chromosomes 1 and 3, together with an analysis of the complete genome sequence, are reported in this issue. (wur.nl)
- Researchers have reconstructed the ancestral sequence of the great ape Y chromosome by comparing three existing (gorilla, human, and chimpanzee) and two newly generated (orangutan and bonobo) Y chromosome assemblies. (scitechdaily.com)
- Academic - A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L. (nibio.no)
- A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.). PLOS ONE, 17(3): 1-15. (nibio.no)
Conformation1
- We report the sequencing and assembly of the E. salsugineum (Shandong accession) genome using long-read sequencing and chromosome conformation capture data. (bvsalud.org)
Tetraploid2
- For the first time, we show the advantages of FISH to reveal chromosome rearrangements in the tetraploid Secale × Dasypyrum hybrids. (unboundmedicine.com)
- Three different methods of back cross breeding were undertaken in attempts to transfer the caducous bract from the hexaploid plants to tetraploid commercial cultivars. (cdc.gov)
Meiosis1
- The separation of these chromosomes during meiosis leads to the 50/50 chance of a gamete having one version or the other. (slideserve.com)
Evolution2
- Ploidy levels and genome sizes have significant implications in plant evolution and crop improvement. (semanticscholar.org)
- A research team led by André Marques at the Max Planck Institute for Plant Breeding Research in Cologne, Germany, has uncovered the profound effects of an atypical mode of chromosome arrangement on genome organization and evolution. (news-medical.net)
Pathogen1
- During fungal infection the host plant recognizes pathogen effectors, which trigger a host defense response. (globalrust.org)
Great apes1
- The orangutan Y chromosome, on the other hand, which serves as an outgroup to ground the comparisons, looked about like what you expect based on its known relationship to the other great apes. (scitechdaily.com)
Condensation1
- The chapter also describes a basic image analysis procedure for plant chromosomes to obtain the density distribution of a chromatid, or condensation pattern, as an example of digital chromosome image analysis. (taylorfrancis.com)
Human10
- The application of image technology to human chromosome research began in the 1960s as diagnostic demands increased. (taylorfrancis.com)
- These are what the chromosomes of a human look like. (windows2universe.org)
- Chromosome pairs like these are in every human cell. (windows2universe.org)
- functional nature of telomere-like sequences scattered around the internal regions of human chromosomes. (researchgate.net)
- A team of biologists and computer scientists at Penn State sequenced and assembled the Y chromosome from orangutan and bonobo and compared those sequences to the existing human, chimpanzee, and gorilla Y sequences. (scitechdaily.com)
- Chromosome 1 is the largest human chromosome, spanning about 249 million DNA building blocks (base pairs) and representing approximately 8 percent of the total DNA in cells. (medlineplus.gov)
- The studies listed below are on human and animal cells, laboratory animals, livestock animals, and plants. (gmwatch.org)
- Number of chromosomes found in human body cells and sex cells. (flashcardmachine.com)
- There are 23 pairs of chromosomes in the cell of human body. (solutionsclass.com)
- We also cooperate with projects evaluating the impact of human activities on plant communities and soil biodiversity in both natural and urban areas. (edu.qa)
Flow cytometry3
- Using flow cytometry, variation in chromosome number could be detected in embryogenic cell suspensions and in plants regenerated from them. (fao.org)
- Results obtained by flow cytometry were verified by chromosome counting in meristem root-tip cells. (fao.org)
- Flow-cytometry based DNA content analysis revealed that the ploidy levels were maintained in in vitro regenerated plants. (who.int)
Pair6
- One chromosome of each pair came from your mother and one from your father. (windows2universe.org)
- The karyotype of the swan goose is 2n=80, consisting of four pairs of macrochromosomes, 35 pairs of microchromosomes, and a pair of sex chromosomes. (thainationalparks.com)
- Compared to the greylag goose, there seems to have been some rearrangement on the fourth-largest chromosome pair. (thainationalparks.com)
- The 23rd pair in gonadal cell called sex chromosome which is not always a perfect pair. (solutionsclass.com)
- Women have a perfect pair having XX - chromosomes. (solutionsclass.com)
- But men have a pair having XY-chromosomes. (solutionsclass.com)
Alleles1
- It is hard to tell which alleles belong to which set of chromosomes in heterozygous regions. (cd-genomics.com)
Vitro1
- This is the first report for in vitro plant regeneration in E. ochreata. (who.int)
Cyperaceae1
- It inhabits steppe to taiga and mountain valleys near freshwater, grazing on plants such as sedges (Cyperaceae), and rarely swimming. (thainationalparks.com)
Cell10
- Aneuploidy is an abnormality in the number of chromosomes in a cell due to loss or duplication. (genome.gov)
- Restriction fragments containing T-DNA/plant DNA junctions were cloned from one of the cell lines, which has a single copy of the T-DNA in a unique region of its genome. (elsevier.com)
- Light plays a critical role in the regulation of plant cell wall formation. (cell.com)
- This study reveals a PHYB-PIF4-MYC2/MYC4 module that inhibits secondary cell wall thickening in stem fiber cells via NST1 -directed transcriptional regulatory networks, providing new insights into plant cell wall formation in response to shaded conditions. (cell.com)
- For the first time, a hypotriploid banana embryogenic cell line with 2n = 28 (i.e. with loss of five chromosomes) was reported. (fao.org)
- In cell suspensions or calli the number of dividing cells is rather low, and chromosome observation difficult. (fao.org)
- The present paper studies the possibility of verifying the stability of the ploidy level of embryogenic cell suspensions prior the formation of embryos or plants. (fao.org)
- 1q21.1 microdeletion is a chromosomal change in which a small piece of the long (q) arm of chromosome 1 is deleted in each cell. (medlineplus.gov)
- A cell with one of every kind of chromosome. (flashcardmachine.com)
- Because when a parent cell divides in to daughter cells then it gives equal number of chromosomes to. (blurtit.com)
Biology2
- Current Plant Biology. (usda.gov)
- Also listed as Public Health C102 and Plant Biology C103. (berkeley.edu)
Polyploid1
- The National Agricultural Food Research Organization (NARO) and Ishikawa Prefectural University have jointly developed a method to rapidly produce DNA markers in polyploid crops such as potato and sweetpotato, which are difficult to select ideal individuals because of innumerable chromosome combinations in breeding. (go.jp)
Deletion1
- A deletion in the 1q21.1 region of chromosome 1 is involved in most cases of thrombocytopenia-absent radius (TAR) syndrome. (medlineplus.gov)
Heredity1
- Heredity is the passage of DNA from the chromosomes of one generation to the chromosomes of the next. (windows2universe.org)
Fungi1
- 1 P450 enzymes are widely distributed in natural product biosynthetic pathways from bacteria, fungi, and plants. (cdc.gov)
19931
- 1993. Chromosome numbers of New World Acanthaceae. (tolweb.org)
Dominant1
- Crosses and Chromosomes Do Now (dihybrid cross) In fruit flies, red eyes are dominant to white, and wings are dominant to no wings Draw a Punnett square representing a cross between two flies heterozygous for both traits. (slideserve.com)
Cells3
- research group led by Dr. Soichi Sano, a specially appointed lecturer in the Department of Cardiovascular Medicine, Graduate School of Medicine, Osaka Metropolitan University, revealed that men with hematopoietic mosaic loss of Y chromosome (mLOY) - meaning men with an increase, in the blood, of cells that have lost the male sex chromosome - have a worse prognosis for heart failure due to fibrosis progression in the heart. (news-medical.net)
- RNAi-deficient TbAGO1-/- cells showed numerous defects in chromosome segregation and mitotic spindle assembly. (biomedcentral.com)
- A fantastic case of active transport is the most important hair cells in plants. (millsranch.net)
19961
- Index to plant chromosome numbers 1996 - 1997. (koeltz.com)
Behavior1
- Chromosome behavior in Calycanthus . (bbg.org)
Sequences2
- In addition we analyse rye chromosome pairs using FISH with chromosome-specific DNA sequences on S. cereale × D. villosum hybrids. (unboundmedicine.com)
- The Y chromosome contains a lot of repetitive sequences, which are challenging for DNA sequencing, assembling sequences, and aligning sequences for comparison. (scitechdaily.com)
Amplification1
- Amplification of mouse chromosome 4 in chemically induced and invasive mouse lung adenocarcinoma. (cdc.gov)
Characteristics1
- Mendel took pea plants having different characteristics, like a tall plant and a short plant. (solutionsclass.com)