Chromosomes
Chromosome Mapping
Chromosome Banding
Staining of bands, or chromosome segments, allowing the precise identification of individual chromosomes or parts of chromosomes. Applications include the determination of chromosome rearrangements in malformation syndromes and cancer, the chemistry of chromosome segments, chromosome changes during evolution, and, in conjunction with cell hybridization studies, chromosome mapping.
X Chromosome
Chromosomes, Human
Chromosomes, Bacterial
Chromosomes, Fungal
Chromosome Aberrations
Chromosomes, Mammalian
Mitosis
Chromatids
Either of the two longitudinally adjacent threads formed when a eukaryotic chromosome replicates prior to mitosis. The chromatids are held together at the centromere. Sister chromatids are derived from the same chromosome. (Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
Meiosis
Sex Chromosomes
The homologous chromosomes that are dissimilar in the heterogametic sex. There are the X CHROMOSOME, the Y CHROMOSOME, and the W, Z chromosomes (in animals in which the female is the heterogametic sex (the silkworm moth Bombyx mori, for example)). In such cases the W chromosome is the female-determining and the male is ZZ. (From King & Stansfield, A Dictionary of Genetics, 4th ed)
Chromosomes, Plant
Synaptonemal Complex
Chromosomes, Human, Pair 1
In Situ Hybridization, Fluorescence
Metaphase
Chromatin
Chromosomes, Human, Pair 7
Chromosomes, Human, Pair 11
Centromere
Chromosomes, Human, Pair 17
Chromosomal Proteins, Non-Histone
Chromosomes, Human, Pair 6
Polytene Chromosomes
Chromosomes, Human, Pair 9
Chromosomes, Human, Pair 21
Pachytene Stage
Chromosomes, Human, 6-12 and X
Crossing Over, Genetic
The reciprocal exchange of segments at corresponding positions along pairs of homologous CHROMOSOMES by symmetrical breakage and crosswise rejoining forming cross-over sites (HOLLIDAY JUNCTIONS) that are resolved during CHROMOSOME SEGREGATION. Crossing-over typically occurs during MEIOSIS but it may also occur in the absence of meiosis, for example, with bacterial chromosomes, organelle chromosomes, or somatic cell nuclear chromosomes.
Chromosomes, Human, Pair 2
Chromosomes, Human, Pair 16
Chromosomes, Human, Pair 22
Chromosomes, Human, Pair 13
Recombination, Genetic
Chromosomes, Human, Pair 4
Chromosomes, Human, Pair 10
Chromosomes, Human, Y
Chromosomes, Human, Pair 8
Chromosomes, Human, Pair 19
Chromosome Disorders
Chromosomes, Artificial, Bacterial
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
Chromosomes, Human, X
Multiprotein Complexes
Chromosomes, Human, 1-3
Chromosomes, Human, Pair 12
Chromosome Painting
A technique for visualizing CHROMOSOME ABERRATIONS using fluorescently labeled DNA probes which are hybridized to chromosomal DNA. Multiple fluorochromes may be attached to the probes. Upon hybridization, this produces a multicolored, or painted, effect with a unique color at each site of hybridization. This technique may also be used to identify cross-species homology by labeling probes from one species for hybridization with chromosomes from another species.
Chromosomes, Human, Pair 5
Base Sequence
Chromosomes, Human, Pair 15
Mutation
Interphase
Chromosomes, Human, Pair 14
Chromosomes, Human, Pair 18
Chromosomes, Human, 16-18
Chromosomes, Human, Pair 20
Chromosomes, Artificial, Yeast
Chromosomes in which fragments of exogenous DNA ranging in length up to several hundred kilobase pairs have been cloned into yeast through ligation to vector sequences. These artificial chromosomes are used extensively in molecular biology for the construction of comprehensive genomic libraries of higher organisms.
Cell Nucleus
Within a eukaryotic cell, a membrane-limited body which contains chromosomes and one or more nucleoli (CELL NUCLEOLUS). The nuclear membrane consists of a double unit-type membrane which is perforated by a number of pores; the outermost membrane is continuous with the ENDOPLASMIC RETICULUM. A cell may contain more than one nucleus. (From Singleton & Sainsbury, Dictionary of Microbiology and Molecular Biology, 2d ed)
Chromosomes, Human, 13-15
Telomere
Genetic Linkage
Chromosome Breakage
Chromosomes, Human, 21-22 and Y
DNA
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
DNA Topoisomerases, Type II
Adenosine Triphosphatases
Cell Cycle Proteins
Proteins that control the CELL DIVISION CYCLE. This family of proteins includes a wide variety of classes, including CYCLIN-DEPENDENT KINASES, mitogen-activated kinases, CYCLINS, and PHOSPHOPROTEIN PHOSPHATASES as well as their putative substrates such as chromatin-associated proteins, CYTOSKELETAL PROTEINS, and TRANSCRIPTION FACTORS.
Histones
Drosophila
DNA-Binding Proteins
Heterochromatin
Chromosome Inversion
Genetic Markers
Drosophila melanogaster
Chromosome Positioning
Nuclear Proteins
Chromosomes, Human, 4-5
Models, Genetic
Alleles
Evolution, Molecular
Drosophila Proteins
X Chromosome Inactivation
Saccharomyces cerevisiae
Cloning, Molecular
Schizosaccharomyces
Anaphase
Translocation, Genetic
Amino Acid Sequence
Hybrid Cells
Chromosomes, Human, 19-20
Aneuploidy
The chromosomal constitution of cells which deviate from the normal by the addition or subtraction of CHROMOSOMES, chromosome pairs, or chromosome fragments. In a normally diploid cell (DIPLOIDY) the loss of a chromosome pair is termed nullisomy (symbol: 2N-2), the loss of a single chromosome is MONOSOMY (symbol: 2N-1), the addition of a chromosome pair is tetrasomy (symbol: 2N+2), the addition of a single chromosome is TRISOMY (symbol: 2N+1).
Cell Cycle
The complex series of phenomena, occurring between the end of one CELL DIVISION and the end of the next, by which cellular material is duplicated and then divided between two daughter cells. The cell cycle includes INTERPHASE, which includes G0 PHASE; G1 PHASE; S PHASE; and G2 PHASE, and CELL DIVISION PHASE.
Transcription, Genetic
Microscopy, Fluorescence
Saccharomyces cerevisiae Proteins
Caenorhabditis elegans
Lod Score
Pedigree
Crosses, Genetic
Microsatellite Repeats
Phenotype
Escherichia coli
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
Cricetinae
Transcription Factors
Fluorescent Antibody Technique
Test for tissue antigen using either a direct method, by conjugation of antibody with fluorescent dye (FLUORESCENT ANTIBODY TECHNIQUE, DIRECT) or an indirect method, by formation of antigen-antibody complex which is then labeled with fluorescein-conjugated anti-immunoglobulin antibody (FLUORESCENT ANTIBODY TECHNIQUE, INDIRECT). The tissue is then examined by fluorescence microscopy.
HeLa Cells
Models, Biological
Nondisjunction, Genetic
Chromosomes, Artificial, Human
Kinetochores
Nucleic Acid Hybridization
Widely used technique which exploits the ability of complementary sequences in single-stranded DNAs or RNAs to pair with each other to form a double helix. Hybridization can take place between two complimentary DNA sequences, between a single-stranded DNA and a complementary RNA, or between two RNA sequences. The technique is used to detect and isolate specific sequences, measure homology, or define other characteristics of one or both strands. (Kendrew, Encyclopedia of Molecular Biology, 1994, p503)
Chromosome Walking
A technique with which an unknown region of a chromosome can be explored. It is generally used to isolate a locus of interest for which no probe is available but that is known to be linked to a gene which has been identified and cloned. A fragment containing a known gene is selected and used as a probe to identify other overlapping fragments which contain the same gene. The nucleotide sequences of these fragments can then be characterized. This process continues for the length of the chromosome.
Chromosomal Instability
Spindle Apparatus
Blotting, Southern
Sequence Analysis, DNA
Chromosome Fragility
Genotype
Haplotypes
DNA, Satellite
Highly repetitive DNA sequences found in HETEROCHROMATIN, mainly near centromeres. They are composed of simple sequences (very short) (see MINISATELLITE REPEATS) repeated in tandem many times to form large blocks of sequence. Additionally, following the accumulation of mutations, these blocks of repeats have been repeated in tandem themselves. The degree of repetition is on the order of 1000 to 10 million at each locus. Loci are few, usually one or two per chromosome. They were called satellites since in density gradients, they often sediment as distinct, satellite bands separate from the bulk of genomic DNA owing to a distinct BASE COMPOSITION.
DNA Probes
Species- or subspecies-specific DNA (including COMPLEMENTARY DNA; conserved genes, whole chromosomes, or whole genomes) used in hybridization studies in order to identify microorganisms, to measure DNA-DNA homologies, to group subspecies, etc. The DNA probe hybridizes with a specific mRNA, if present. Conventional techniques used for testing for the hybridization product include dot blot assays, Southern blot assays, and DNA:RNA hybrid-specific antibody tests. Conventional labels for the DNA probe include the radioisotope labels 32P and 125I and the chemical label biotin. The use of DNA probes provides a specific, sensitive, rapid, and inexpensive replacement for cell culture techniques for diagnosing infections.
Polymerase Chain Reaction
In vitro method for producing large amounts of specific DNA or RNA fragments of defined length and sequence from small amounts of short oligonucleotide flanking sequences (primers). The essential steps include thermal denaturation of the double-stranded target molecules, annealing of the primers to their complementary sequences, and extension of the annealed primers by enzymatic synthesis with DNA polymerase. The reaction is efficient, specific, and extremely sensitive. Uses for the reaction include disease diagnosis, detection of difficult-to-isolate pathogens, mutation analysis, genetic testing, DNA sequencing, and analyzing evolutionary relationships.
Genes
Repetitive Sequences, Nucleic Acid
Sequences of DNA or RNA that occur in multiple copies. There are several types: INTERSPERSED REPETITIVE SEQUENCES are copies of transposable elements (DNA TRANSPOSABLE ELEMENTS or RETROELEMENTS) dispersed throughout the genome. TERMINAL REPEAT SEQUENCES flank both ends of another sequence, for example, the long terminal repeats (LTRs) on RETROVIRUSES. Variations may be direct repeats, those occurring in the same direction, or inverted repeats, those opposite to each other in direction. TANDEM REPEAT SEQUENCES are copies which lie adjacent to each other, direct or inverted (INVERTED REPEAT SEQUENCES).
Diploidy
Mosaicism
Heterozygote
Multigene Family
A set of genes descended by duplication and variation from some ancestral gene. Such genes may be clustered together on the same chromosome or dispersed on different chromosomes. Examples of multigene families include those that encode the hemoglobins, immunoglobulins, histocompatibility antigens, actins, tubulins, keratins, collagens, heat shock proteins, salivary glue proteins, chorion proteins, cuticle proteins, yolk proteins, and phaseolins, as well as histones, ribosomal RNA, and transfer RNA genes. The latter three are examples of reiterated genes, where hundreds of identical genes are present in a tandem array. (King & Stanfield, A Dictionary of Genetics, 4th ed)
Polyploidy
Gene Deletion
Prophase
Gene Dosage
The number of copies of a given gene present in the cell of an organism. An increase in gene dosage (by GENE DUPLICATION for example) can result in higher levels of gene product formation. GENE DOSAGE COMPENSATION mechanisms result in adjustments to the level GENE EXPRESSION when there are changes or differences in gene dosage.
Loss of Heterozygosity
Genome, Human
Cytogenetic Analysis
Cytogenetics
Karyotype
Polymorphism, Genetic
The regular and simultaneous occurrence in a single interbreeding population of two or more discontinuous genotypes. The concept includes differences in genotypes ranging in size from a single nucleotide site (POLYMORPHISM, SINGLE NUCLEOTIDE) to large nucleotide sequences visible at a chromosomal level.
Cosmids
Chromosome Fragile Sites
Specific loci that show up during KARYOTYPING as a gap (an uncondensed stretch in closer views) on a CHROMATID arm after culturing cells under specific conditions. These sites are associated with an increase in CHROMOSOME FRAGILITY. They are classified as common or rare, and by the specific culture conditions under which they develop. Fragile site loci are named by the letters "FRA" followed by a designation for the specific chromosome, and a letter which refers to which fragile site of that chromosome (e.g. FRAXA refers to fragile site A on the X chromosome. It is a rare, folic acid-sensitive fragile site associated with FRAGILE X SYNDROME.)
Gene Rearrangement
Sex Chromosome Disorders
Monosomy
Plasmids
Spermatocytes
Sequence Tagged Sites
Short tracts of DNA sequence that are used as landmarks in GENOME mapping. In most instances, 200 to 500 base pairs of sequence define a Sequence Tagged Site (STS) that is operationally unique in the human genome (i.e., can be specifically detected by the polymerase chain reaction in the presence of all other genomic sequences). The overwhelming advantage of STSs over mapping landmarks defined in other ways is that the means of testing for the presence of a particular STS can be completely described as information in a database.
Polymorphism, Restriction Fragment Length
Genes, Dominant
Species Specificity
The restriction of a characteristic behavior, anatomical structure or physical system, such as immune response; metabolic response, or gene or gene variant to the members of one species. It refers to that property which differentiates one species from another but it is also used for phylogenetic levels higher or lower than the species.
Polymorphism, Single Nucleotide
DNA Transposable Elements
Discrete segments of DNA which can excise and reintegrate to another site in the genome. Most are inactive, i.e., have not been found to exist outside the integrated state. DNA transposable elements include bacterial IS (insertion sequence) elements, Tn elements, the maize controlling elements Ac and Ds, Drosophila P, gypsy, and pogo elements, the human Tigger elements and the Tc and mariner elements which are found throughout the animal kingdom.
Genetic Predisposition to Disease
Philadelphia Chromosome
An aberrant form of human CHROMOSOME 22 characterized by translocation of the distal end of chromosome 9 from 9q34, to the long arm of chromosome 22 at 22q11. It is present in the bone marrow cells of 80 to 90 per cent of patients with chronic myelocytic leukemia (LEUKEMIA, MYELOGENOUS, CHRONIC, BCR-ABL POSITIVE).
Azure Stains
Chromosomes, Archaeal
Sequence Homology, Nucleic Acid
Chromosome Breakpoints
Contig Mapping
Genome
Haploidy
Sequence Homology, Amino Acid
Genetic Loci
Specific regions that are mapped within a GENOME. Genetic loci are usually identified with a shorthand notation that indicates the chromosome number and the position of a specific band along the P or Q arm of the chromosome where they are found. For example the locus 6p21 is found within band 21 of the P-arm of CHROMOSOME 6. Many well known genetic loci are also known by common names that are associated with a genetic function or HEREDITARY DISEASE.
DNA Primers
Sex Chromatin
Genomic Imprinting
Gene Duplication
Hybridization, Genetic
Gene Amplification
A selective increase in the number of copies of a gene coding for a specific protein without a proportional increase in other genes. It occurs naturally via the excision of a copy of the repeating sequence from the chromosome and its extrachromosomal replication in a plasmid, or via the production of an RNA transcript of the entire repeating sequence of ribosomal RNA followed by the reverse transcription of the molecule to produce an additional copy of the original DNA sequence. Laboratory techniques have been introduced for inducing disproportional replication by unequal crossing over, uptake of DNA from lysed cells, or generation of extrachromosomal sequences from rolling circle replication.
Genes, Lethal
Genes whose loss of function or gain of function MUTATION leads to the death of the carrier prior to maturity. They may be essential genes (GENES, ESSENTIAL) required for viability, or genes which cause a block of function of an essential gene at a time when the essential gene function is required for viability.
Intellectual Disability
Subnormal intellectual functioning which originates during the developmental period. This has multiple potential etiologies, including genetic defects and perinatal insults. Intelligence quotient (IQ) scores are commonly used to determine whether an individual has an intellectual disability. IQ scores between 70 and 79 are in the borderline range. Scores below 67 are in the disabled range. (from Joynt, Clinical Neurology, 1992, Ch55, p28)
Chromosomes, Artificial
Sister Chromatid Exchange
An exchange of segments between the sister chromatids of a chromosome, either between the sister chromatids of a meiotic tetrad or between the sister chromatids of a duplicated somatic chromosome. Its frequency is increased by ultraviolet and ionizing radiation and other mutagenic agents and is particularly high in BLOOM SYNDROME.
Interactions of Isw2 chromatin remodeling complex with nucleosomal arrays: analyses using recombinant yeast histones and immobilized templates. (1/51)
To facilitate the biochemical characterization of chromatin-associated proteins in the budding yeast Saccharomyces cerevisiae, we have developed a system to assemble nucleosomal arrays on immobilized templates using recombinant yeast core histones. This system enabled us to analyze the interaction of Isw2 ATP-dependent chromatin remodeling complex with nucleosomal arrays. We found that Isw2 complex interacts efficiently with both naked DNA and nucleosomal arrays in an ATP-independent manner, suggesting that ATP is required at steps subsequent to this physical interaction. We identified the second subunit of Isw2 complex, encoded by open reading frame YGL 133w (herein named ITC1), and found that both subunits of the complex, Isw2p and Itc1p, are essential for efficient interaction with DNA and nucleosomal arrays. Both subunits are also required for nucleosome-stimulated ATPase activity and chromatin remodeling activity of the complex. Finally, we found that ITC1 is essential for function of Isw2 complex in vivo, since isw2 and itc1 deletion mutants exhibit virtually identical phenotypes. These results demonstrate the utility of our in vitro system in studying interactions between chromatin-associated proteins and nucleosomal arrays. (+info)The Drosophila Su(var)2-10 locus regulates chromosome structure and function and encodes a member of the PIAS protein family. (2/51)
The conserved heterochromatic location of centromeres in higher eukaryotes suggests that intrinsic properties of heterochromatin are important for chromosome inheritance. Based on this hypothesis, mutations in Drosophila melanogaster that alter heterochromatin-induced gene silencing were tested for effects on chromosome inheritance. Here we describe the characterization of the Su(var)2-10 locus, initially identified as a Suppressor of Position-Effect Variegation. Su(var)2-10 is required for viability, and mutations cause both minichromosome and endogenous chromosome inheritance defects. Mitotic chromosomes are improperly condensed in mutants, and polytene chromosomes are structurally abnormal and disorganized in the nucleus. Su(var)2-10 encodes a member of the PIAS protein family, a group of highly conserved proteins that control diverse functions. SU(VAR)2-10 proteins colocalize with nuclear lamin in interphase, and little to no SU(VAR)2-10 is found on condensed mitotic chromosomes. SU(VAR)2-10 is present at some polytene chromosome telomeres, and FISH analyses in mutant polytene nuclei revealed defects in telomere clustering and telomere-nuclear-lamina associations. We propose that Su(var2-10 controls multiple aspects of chromosome structure and function by establishing/maintaining chromosome organization in interphase nuclei. (+info)Genome sequence of the human malaria parasite Plasmodium falciparum. (3/51)
The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes of free-living eukaryotic microbes, the genome of this intracellular parasite encodes fewer enzymes and transporters, but a large proportion of genes are devoted to immune evasion and host-parasite interactions. Many nuclear-encoded proteins are targeted to the apicoplast, an organelle involved in fatty-acid and isoprenoid metabolism. The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria. (+info)A role of topoisomerase II in linking DNA replication to chromosome condensation. (4/51)
The condensin complex and topoisomerase II (topo II) have different biochemical activities in vitro, and both are required for mitotic chromosome condensation. We have used Xenopus egg extracts to investigate the functional interplay between condensin and topo II in chromosome condensation. When unreplicated chromatin is directly converted into chromosomes with single chromatids, the two proteins must function together, although they are independently targeted to chromosomes. In contrast, the requirement for topo II is temporarily separable from that of condensin when chromosome assembly is induced after DNA replication. This experimental setting allows us to find that, in the absence of condensin, topo II becomes enriched in an axial structure within uncondensed chromatin. Subsequent addition of condensin converts this structure into mitotic chromosomes in an ATP hydrolysis-dependent manner. Strikingly, preventing DNA replication by the addition of geminin or aphidicolin disturbs the formation of topo II-containing axes and alters the binding property of topo II with chromatin. Our results suggest that topo II plays an important role in an early stage of chromosome condensation, and that this function of topo II is tightly coupled with prior DNA replication. (+info)Microtubule distribution during meiosis I in flea-beetle [Alagoasa (Oedionychus)] spermatocytes: evidence for direct connections between unpaired sex chromosomes. (5/51)
The meiosis-I spindle in flea-beetle spermatocytes is unusual in that the autosomes and univalent sex chromosomes are separated by a mitochondrial sheath and move polewards at different times. To help understand the basis for this interesting chromosome behaviour, and to gather more detailed information about it, we studied microtubule distributions throughout meiosis I using immunofluorescence and confocal microscopy, and took careful measurements of pole and kinetochore positions at all stages of division. Our results show that, by late prophase, there is a spindle-shaped cytoplasmic array of microtubules in the central part of the cell, with the nucleus at the periphery. Following nuclear envelope breakdown, both autosomes and sex chromosomes become associated with cytoplasmic microtubules, although only the autosomes move centrally to the 'cytoplasmic spindle'. The two unpaired sex chromosomes remain at the cell periphery and appear to be connected to each other by a microtubule bundle extending between their kinetochores. These bundles often persist into anaphase. Analysis of measurements taken from fixed/stained cells supports previous observations that sex chromosomes move part way to the pole in early prometaphase and then stop. The measurements also suggest that during autosomal anaphase, spindle elongation precedes autosome movement to the poles and polewards movement of sex chromosomes is limited or absent when autosomes are moving polewards. (+info)Engineered chromosome regions with altered sequence composition demonstrate hierarchical large-scale folding within metaphase chromosomes. (6/51)
Mitotic chromosome structure and DNA sequence requirements for normal chromosomal condensation remain unknown. We engineered labeled chromosome regions with altered scaffold-associated region (SAR) sequence composition as a formal test of the radial loop and other chromosome models. Chinese hamster ovary cells were isolated containing high density insertions of a transgene containing lac operator repeats and a dihydrofolate reductase gene, with or without flanking SAR sequences. Lac repressor staining provided high resolution labeling with good preservation of chromosome ultrastructure. No evidence emerged for differential targeting of SAR sequences to a chromosome axis within native chromosomes. SAR sequences distributed uniformly throughout the native chromosome cross section and chromosome regions containing a high density of SAR transgene insertions showed normal diameter and folding. Ultrastructural analysis of two different transgene insertion sites, both spanning less than the full chromatin width, clearly contradicted predictions of simple radial loop models while providing strong support for hierarchical models of chromosome architecture. Specifically, an approximately 250-nm-diam folding subunit was visualized directly within fully condensed metaphase chromosomes. Our results contradict predictions of simple radial loop models and provide the first unambiguous demonstration of a hierarchical folding subunit above the level of the 30-nm fiber within normally condensed metaphase chromosomes. (+info)Histone hyperacetylation in mitosis prevents sister chromatid separation and produces chromosome segregation defects. (7/51)
Posttranslational modifications of core histones contribute to driving changes in chromatin conformation and compaction. Herein, we investigated the role of histone deacetylation on the mitotic process by inhibiting histone deacetylases shortly before mitosis in human primary fibroblasts. Cells entering mitosis with hyperacetylated histones displayed altered chromatin conformation associated with decreased reactivity to the anti-Ser 10 phospho H3 antibody, increased recruitment of protein phosphatase 1-delta on mitotic chromosomes, and depletion of heterochromatin protein 1 from the centromeric heterochromatin. Inhibition of histone deacetylation before mitosis produced defective chromosome condensation and impaired mitotic progression in living cells, suggesting that improper chromosome condensation may induce mitotic checkpoint activation. In situ hybridization analysis on anaphase cells demonstrated the presence of chromatin bridges, which were caused by persisting cohesion along sister chromatid arms after centromere separation. Thus, the presence of hyperacetylated chromatin during mitosis impairs proper chromosome condensation during the pre-anaphase stages, resulting in poor sister chromatid resolution. Lagging chromosomes consisting of single or paired sisters were also induced by the presence of hyperacetylated histones, indicating that the less constrained centromeric organization associated with heterochromatin protein 1 depletion may promote the attachment of kinetochores to microtubules coming from both poles. (+info)Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighborhoods. (8/51)
Typically, eukaryotic nuclei contain 10-30 prominent domains (referred to here as SC-35 domains) that are concentrated in mRNA metabolic factors. Here, we show that multiple specific genes cluster around a common SC-35 domain, which contains multiple mRNAs. Nonsyntenic genes are capable of associating with a common domain, but domain "choice" appears random, even for two coordinately expressed genes. Active genes widely separated on different chromosome arms associate with the same domain frequently, assorting randomly into the 3-4 subregions of the chromosome periphery that contact a domain. Most importantly, visualization of six individual chromosome bands showed that large genomic segments ( approximately 5 Mb) have striking differences in organization relative to domains. Certain bands showed extensive contact, often aligning with or encircling an SC-35 domain, whereas others did not. All three gene-rich reverse bands showed this more than the gene-poor Giemsa dark bands, and morphometric analyses demonstrated statistically significant differences. Similarly, late-replicating DNA generally avoids SC-35 domains. These findings suggest a functional rationale for gene clustering in chromosomal bands, which relates to nuclear clustering of genes with SC-35 domains. Rather than random reservoirs of splicing factors, or factors accumulated on an individual highly active gene, we propose a model of SC-35 domains as functional centers for a multitude of clustered genes, forming local euchromatic "neighborhoods." (+info)Science Researcher Update | Chromosome Structure
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Eukaryotic chromosome structure
"Eukaryotic Chromosome Structure". www.ndsu.edu. Retrieved 15 September 2014. "Structure of Chromosomes Revealed." University of ... males have both an X chromosome and a Y chromosome instead of a pair of X chromosomes as seen in females). Each chromosome ... Eukaryotic chromosome structure refers to the levels of packaging from raw DNA molecules to the chromosomal structures seen ... ISBN 978-1-4641-2614-7. "Eukaryotic Chromosome Structure". SciencePrimer. Retrieved 15 September 2014. "Chromosome". www.nature ...
Eukaryotic chromosome fine structure
... refers to the structure of sequences for eukaryotic chromosomes. Some fine sequences are ... Other sequences are used in replication or during interphase with the physical structure of the chromosome. Ori, or Origin: ... Throughout the eukaryotic kingdom, the overall structure of chromosome ends is conserved and is characterized by the telomeric ... They may also be involved in fillers for increasing chromosome size to some minimum threshold level necessary for chromosome ...
Homologous chromosome
... when two chromosomes containing the relatively same structure exist (e.g., maternal chromosome 15 and paternal chromosome 15), ... One set of 23 chromosomes (n) is from the mother (22 autosomes, 1 sex chromosome (X only)) and one set of 23 chromosomes (n) is ... Structures called chiasmata are the site of the exchange. Chiasmata physically link the homologous chromosomes once crossing ... It reduces the chromosome number in a germ cell by half by first separating the homologous chromosomes in meiosis I and then ...
Secondary chromosome
diCenzo, George C.; Finan, Turlough M. (2017-08-09). "The Divided Bacterial Genome: Structure, Function, and Evolution". ... Chromids have at least one core gene absent from the main chromosome. (Main chromosomes contain the bulk of the core genes of a ... two separate bacterial chromosomes may arise through the splitting of one larger chromosome, resulting in a main and a ... negotiating the cell cycle in prokaryotes with multiple chromosomes: Multiple chromosomes in prokaryotes". Molecular ...
Satellite chromosome
Schmid, M.; Haaf, T.; Solleder, E.; Schempp, W.; Leipoldt, M.; Heilbronner, H. (1984). "Satellited Y chromosomes: structure, ... These chromosomes are called satellite chromosomes. In humans it is usually associated with the short arm of an acrocentric ... Satellite or SAT chromosomes are chromosomes that contain secondary constructs that serve as identification. They are observed ... The satellite at metaphase appears to be attached to the chromosomes by a thread of chromatin. SAT-chromosomes whose secondary ...
Chromosome conformation capture
August 2015). "Bipartite structure of the inactive mouse X chromosome". Genome Biology. 16 (1): 152. doi:10.1186/s13059-015- ... October 2013). "Single-cell Hi-C reveals cell-to-cell variability in chromosome structure". Nature. 502 (7469): 59-64. Bibcode: ... Chromosome conformation capture-on-chip (4C) (also known as circular chromosome conformation capture) captures interactions ... "Single-cell Hi-C reveals cell-to-cell variability in chromosome structure". Nature. 502 (7469): 59-64. Bibcode:2013Natur.502... ...
Chromosome 16
Maillard, A M (25 November 2014). "The 16p11.2 locus modulates brain structures common to autism, schizophrenia and obesity". ... Chromosome 16 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome ... "Chromosome 16: Chromosome summary - Homo sapiens". Ensembl Release 88. 2017-03-29. Retrieved 2017-05-19. "Human chromosome 16: ... "Chromosome 16". Genetics Home Reference. Archived from the original on August 3, 2004. Retrieved 2017-05-06. "Chromosome 16". ...
Circular chromosome
The crystal structure of the Ter DNA-Tus protein complex (A) showing the nonblocking and the fork-blocking faces of Tus. (B) A ... A circular chromosome is a chromosome in bacteria, archaea, mitochondria, and chloroplasts, in the form of a molecule of ... However, a circular chromosome can provide other challenges for cells. After replication, the two progeny circular chromosomes ... Eventually, the two replication forks moving around the circular chromosome meet in a specific zone of the chromosome, ...
Chromosome instability
Chromosome segregation errors during mitosis lead to the formation of structures called micronuclei. These micronuclei, which ... As chromosome instability refers to the rate that chromosomes or large portions of chromosomes are changed, there should be ... It can occur due to loss of a whole chromosome, gain of a whole chromosome or rearrangement of partial chromosomes known as ... Since human chromosomes contain repetitive DNA sections, broken DNA segments from one chromosome can combine with similar ...
Polycomb recruitment in X chromosome inactivation
Pintacuda G, Young AN, Cerase A (2017). "Function by Structure: Spotlights on Xist Long Non-coding RNA". Frontiers in Molecular ... July 2015). "Chromosomes. A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome ... October 2016). "Xist recruits the X chromosome to the nuclear lamina to enable chromosome-wide silencing". Science. 354 (6311 ... X chromosome inactivation (XCI) is the phenomenon that has been selected during the evolution to balance X-linked gene dosage ...
Chromosome 7
A circular structure called ring chromosome 7 is also possible. A ring chromosome occurs when both ends of a broken chromosome ... Chromosome 7 is one of the 23 pairs of chromosomes in humans, who normally have two copies of this chromosome. Chromosome 7 ... "Chromosome 7: Chromosome summary - Homo sapiens". Ensembl Release 88. 2017-03-29. Retrieved 2017-05-19. "Human chromosome 7: ... Other changes in the number or structure of chromosome 7 can cause delayed growth and development, mental disorder, ...
Philadelphia chromosome
... their chromosomes-usually an indistinct tangle-were visible as separate structures. In searching for an expert on chromosomes, ... The Philadelphia chromosome is designated Ph (or Ph') chromosome and designates the shortened chromosome 22 which encodes the ... of chromosome 9 and region (1), band (1), sub-band (2) of the long arm (q) of chromosome 22. Hence the chromosome breakpoints ... creating an elongated chromosome 9 (termed a derivative chromosome, or der 9), and a truncated chromosome 22 (the Philadelphia ...
List of organisms by chromosome count
Kumar S, Kumari R (June 2015). "Origin, structure and function of millions of chromosomes present in the macronucleus of ... As other non-human extant hominidae have 48 chromosomes it is believed that the human chromosome 2 is the result of the merging ... It shows 22 homologous autosomal chromosome pairs, both the female (XX) and male (XY) versions of the two sex chromosomes, as ... The list of organisms by chromosome count describes ploidy or numbers of chromosomes in the cells of various plants, animals, ...
Y chromosome
The full range of ambiguity of structure may occur, especially if mosaicism is present. When the Y fragment is minimal and ... Males have one Y chromosome and one X chromosome, while females have two X chromosomes. In mammals, the Y chromosome contains a ... The chromosome with this allele became the Y chromosome, while the other member of the pair became the X chromosome. Over time ... Only the tips of the Y and X chromosomes recombine. The tips of the Y chromosome that could recombine with the X chromosome are ...
Chromosome 6
Matsuda LA, Lolait SJ, Brownstein MJ, Young AC, Bonner TI (August 1990). "Structure of a cannabinoid receptor and functional ... Chromosome 6 is one of the 23 pairs of chromosomes in humans. People normally have two copies of this chromosome. Chromosome 6 ... "Chromosome 6: Chromosome summary - Homo sapiens". Ensembl Release 88. 2017-03-29. Retrieved 2017-05-19. "Human chromosome 6: ... "Chromosome 6". Genetics Home Reference. Archived from the original on 2007-08-12. Retrieved 2017-05-06. "Chromosome 6". Human ...
Sex-chromosome dosage compensation
He called these structures Barr bodies after one of the investigators who originally documented their existence. Ohno's studies ... of the Y chromosome during meiosis. Additionally, 10-25% of human X chromosome genes, and 3-7% of mouse X chromosome genes ... A recent study revealed that four platypus X chromosomes, as well as a Y chromosome, are homologous to some regions on the ... Though these RNAs bind at specific sites along the male X chromosome, their effects spread along the length of the chromosome ...
Human Y-chromosome DNA haplogroup
Underhill and Kivisild; Kivisild, T (2007). "Use of Y Chromosome and Mitochondrial DNA Population Structure in Tracing Human ... Subclades are defined by a terminal SNP, the SNP furthest down in the Y-chromosome phylogenetic tree. The Y Chromosome ... Y-chromosome DNA (Y-DNA) haplogroups are the major branches on the human paternal family tree. Each haplogroup has many ... 2005 Y-chromosome Phylogenetic Tree, from FamilyTreeDNA.com ^ A Nomenclature system for the Tree of Human Y-Chromosomal ...
Holocentric chromosome
... holocentric chromosomes without any further step. A detailed molecular analysis of the structure of holocentric chromosomes is ... transmission electron microscopy of C. elegans chromosomes revealed that the kinetochore has a trilaminar structure very ... Holocentric chromosomes were described for the first time by Franz Schrader in 1935, who identified chromosomes with a diffuse ... Holocentric chromosomes are chromosomes that possess multiple kinetochores along their length rather than the single centromere ...
Lampbrush chromosome
Morgan, G.T. (2002) Lampbrush chromosomes and associated bodies: new insights into principles of nuclear structure and function ... Chromosome Res. 2012. V. 20. P. 911-924. Chromosome Research - Special Issue (2012) "Lampbrush Chromosomes" Edited by Herbert ... Morgan, G.T. (2002) Lampbrush chromosomes and associated bodies: new insights into principles of nuclear structure and function ... Morgan, G.T. (2002) Lampbrush chromosomes and associated bodies: new insights into principles of nuclear structure and function ...
Optical sectioning
"Three-dimensional structured illumination microscopy and its application to chromosome structure". Chromosome Res. 16 (3): 351- ... "Full-color structured illumination optical sectioning microscopy". Scientific Reports. 5: 14513. Bibcode:2015NatSR...514513Q. ... or Benzyl-ether which render specimens transparent and therefore allow for observation of internal structures. Optical ... two objective lenses to give extremely accurate depth information about a single fluorophore and three-dimensional structured ...
SMC4
... provides an overview of all the structure information available in the PDB for Human Structural maintenance of chromosomes ... Structural maintenance of chromosomes protein 4 (SMC-4) also known as chromosome-associated polypeptide C (CAP-C) or XCAP-C ... Ball Jr AR, Yokomori K (2001). "The structural maintenance of chromosomes (SMC) family of proteins in mammals". Chromosome Res ... Genes on human chromosome 3, All stub articles, Human chromosome 3 gene stubs). ...
Axarus
Werle, S. F. (2005). "Populations of a Connecticut River midge structured by geological history and downstream gene flow". ... Chromosome Research. 13 (1): 97-106. doi:10.1007/s10577-005-2358-6. PMID 15791415. S2CID 16927220. Werle, S. F.; E. Klekowski ... and thus there is genetic structure between populations in the river . The Connecticut River species are also notable in that ... they have extremely well developed polytene chromosomes and also maintain a high degree of inversion polymorphism . A. dorneri ...
Histone
Metazoans also have multiple copies of histone genes clustered on chromosomes which are localized in structures called Cajal ... Johansen KM, Johansen J (2006). "Regulation of chromatin structure by histone H3S10 phosphorylation". Chromosome Research. 14 ( ... these being the structures found in normal cells. During mitosis and meiosis, the condensed chromosomes are assembled through ... Archaeal histone only contains a H3-H4 like dimeric structure made out of a single type of unit. Such dimeric structures can ...
Boveri-Sutton chromosome theory
It also states that chromosomes are linear structures with genes located at specific sites called loci along them. It states ... "1. The chromosome group of the presynaptic germ-cells is made up of two equivalent chromosome-series, and that strong ground ... The Boveri-Sutton chromosome theory (also known as the chromosome theory of inheritance or the Sutton-Boveri theory) is a ... 5. The chromosomes retain a morphological individuality throughout the various cell-divisions. " W. S. Sutton, The Chromosomes ...
Ring chromosome 14 syndrome
Diagnosis is achieved by examining the structure of the chromosomes through karyotyping; while once born, one can do the ... Ring chromosome 18 syndrome Ring chromosome 20 syndrome Reference, Genetics Home. "ring chromosome 14 syndrome". Genetics Home ... Ring chromosome 14 syndrome is a very rare human chromosome abnormality. It occurs when one or both of the telomeres that mark ... of chromosome 14 . The break that causes the telomere(s) to be lost occurs near the end of the chromosome, and is called a ...
Sex chromosome
The high prevalence of autopolyploidy in plants also impacts the structure of their sex chromosomes. Polyploidization can occur ... An X chromosome is always present as the 23rd chromosome in the ovum, while either an X or Y chromosome may be present in an ... The 23rd pair of chromosomes are called allosomes. These consist of two X chromosomes in most females, and an X chromosome and ... a total of 46 chromosomes. The first 22 pairs are called autosomes. Autosomes are homologous chromosomes i.e. chromosomes which ...
Monocentric chromosome
Monocentric centromeres are the most common structure on highly repetitive DNA in plants and animals. Monocentric chromosomes ... The monocentric chromosome is a chromosome that has only one centromere in a chromosome and forms a narrow constriction. ... Holocentric chromosomes do have an evolutionary advantage by preventing the loss of chromosome after a DNA double-strand break ... In monocentric chromosomes there is one primary constriction and the centromere its CenH3 loci at this location. Holocentric ...
Unicellular organism
"Eukaryotic Chromosome Structure , Science Primer". scienceprimer.com. Retrieved 2015-11-22. Smith, Dwight G (2015). Bacteria. ... Stromatolites, structures made up of layers of calcium carbonate and trapped sediment left over from cyanobacteria and ... Most prokaryotes have a single, circular chromosome, which is in contrast to eukaryotes, which typically have linear ... self-replicating DNA molecules that are separate from the bacterial chromosome. Plasmids can carry genes responsible for novel ...
Telomere
... which are very different from those of the eukaryotic chromosomes in structure and function. The known structures of bacterial ... and hypothesized the existence of a special structure at the chromosome tip that would maintain chromosome stability. During ... The function of telomeres is widely accepted as a buffer against tumor growth, to protect chromosome structure, and prevent the ... Maloy S (July 12, 2002). "Bacterial Chromosome Structure". Retrieved 2008-06-22. Martínez P, Blasco MA (October 2010). "Role of ...
Genome
... refers to only one copy of each chromosome. Some eukaryotes have distinctive sex chromosomes such as the X and Y chromosomes of ... Transposable elements (TEs) are sequences of DNA with a defined structure that are able to change their location in the genome ... Eukaryotic genomes are composed of one or more linear DNA chromosomes. The number of chromosomes varies widely from Jack jumper ... it consists of one copy of each of the 22 autosomes plus one X chromosome and one Y chromosome. A genome sequence is the ...
UCKL1
Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with ... v t e (Articles with short description, Short description matches Wikidata, Genes on human chromosome 20, All stub articles, ... 2002). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865-71. Bibcode:2001Natur.414.. ...
Uridine monophosphate synthase
Structure. 16 (1): 82-92. doi:10.1016/j.str.2007.10.020. PMID 18184586. Wu N, Pai EF (Aug 2002). "Crystal structures of ... gene to river buffalo chromosomes by FISH". Chromosome Research. 2 (3): 255-6. doi:10.1007/BF01553326. PMID 8069469. S2CID ... In humans, the gene that codes for this enzyme is located on the long arm of chromosome 3 (3q13). This bifunctional enzyme has ... There is a 30:1 equilibrium between the close and open structures in the enzyme-Mg-PRPP complex, which suggests that the close ...
Antonius Suwanto
Suwanto, A; Kaplan, S (1992). "Chromosome transfer in Rhodobacter sphaeroides: Hfr formation and genetic evidence for two ... Physical structure, incompatibility determinants, origin of replication, and transfer functions". Journal of Bacteriology. 174 ... known for discovering two circular chromosomes or plasmids in Rhodobacter with Kaplan S in 1989. He was born in Jember, ... Presence of two unique circular chromosomes". Journal of Bacteriology. 171 (11): 5850-9. PMC 210445. PMID 2808300. Suwanto, A; ...
Prostaglandin-endoperoxide synthase 2
The tertiary and quaternary structures of PTGS1 (COX-1) and PTGS2 (COX-2) enzymes are almost identical. Each subunit has three ... Genes on human chromosome 1, All articles lacking reliable references, Articles lacking reliable references from June 2011, ... Picot D, Loll PJ, Garavito RM (January 1994). "The X-ray crystal structure of the membrane protein prostaglandin H2 synthase-1 ...
PANO1
A predicted 3' UTR structure was generated using Unafold and depicts predicted stem loop structures. Two stem loop structures ... PANO1 is located on human chromosome 11 at positions 797,511-799,190 and is positioned on the + strand. Its protein contains 1 ... The structure of PANO1 is 82% disordered meaning the protein is able to move around easily. The secondary structure reveals a ... CS1 maint: url-status, Articles with short description, Short description matches Wikidata, Genes on human chromosome 11). ...
Gamma-aminobutyric acid receptor subunit gamma-2
Russek SJ, Farb DH (October 1994). "Mapping of the beta 2 subunit gene (GABRB2) to microdissected human chromosome 5q34-q35 ... Coyle JE, Qamar S, Rajashankar KR, Nikolov DB (January 2002). "Structure of GABARAP in two conformations: implications for GABA ... v t e (Articles with short description, Short description matches Wikidata, Genes on human chromosome 5, Wikipedia articles ...
Proto-oncogene tyrosine-protein kinase Src
This induces long-range allostery via protein domain dynamics, causing the structure to be destabilized, resulting in the ... Portal: Biology (Articles with short description, Short description matches Wikidata, Genes on human chromosome 20, Webarchive ... Structure. 25 (4): 630-640.e4. doi:10.1016/j.str.2017.02.011. PMID 28319009. Cooper JA, Gould KL, Cartwright CA, Hunter T ( ... and Philadelphia chromosome-positive (PH+) acute lymphocytic leukemia (ALL). Dasatinib is also in clinical trials for the use ...
MODY 1
... is due to a loss-of-function mutation in the HNF4A (MODY1) gene on chromosome 12. This gene codes for hepatocyte nuclear ... Dhe-Paganon S, Duda K, Iwamoto M, Chi YI, Shoelson SE (2002). "Crystal structure of the HNF4 alpha ligand binding domain in ...
Arthrospira platensis
... has a single circular chromosome containing 6.8 Mb and 6,631 genes. The G+C content has been determined ... April 2010). "Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39". DNA ...
MAPK8IP3
2001). "Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16". Hum. ... 2005). "The sequence and analysis of duplication-rich human chromosome 16". Nature. 432 (7020): 988-94. Bibcode:2004Natur.432.. ... Articles with short description, Short description matches Wikidata, Genes on human chromosome 16). ...
Choriogenesis
For example, the pattern of X chromosome inactivation is affected by placental status. There is some evidence that it affects ... and primary structure of a chorion cDNA from the gypsy moth". Developmental Biology. 160 (1): 28-38. doi:10.1006/dbio.1993.1283 ...
DDX46
v t e (Articles with short description, Short description matches Wikidata, Genes on human chromosome 5, All stub articles, ... They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation ...
Strømme syndrome
Microtubules are protein structures that are part of the cytoskeleton and are necessary for cells to have diverse, complex ... Strømme syndrome is caused by mutations in both copies of the CENPF gene, located on the long arm of chromosome 1. CENPF codes ... CENPF also has a role in orienting long, cylindrical structures called microtubules to form thin cell protrusions called cilia ... This allows the microtubules to pull the chromosomes apart in the process of dividing the cell. Mutations in this gene lead to ...
Caspase-activated DNase
Lugovskoy AA, Zhou P, Chou JJ, McCarty JS, Li P, Wagner G (December 1999). "Solution structure of the CIDE-N domain of CIDE-B ... Portal: Biology (Articles with short description, Short description matches Wikidata, Genes on human chromosome 1, Apoptosis, ... Uegaki K, Otomo T, Sakahira H, Shimizu M, Yumoto N, Kyogoku Y, Nagata S, Yamazaki T (April 2000). "Structure of the CAD domain ... Zhou P, Lugovskoy AA, McCarty JS, Li P, Wagner G (May 2001). "Solution structure of DFF40 and DFF45 N-terminal domain complex ...
Prokaryotic DNA replication
Chromosome replication in bacteria is regulated at the initiation stage. DnaA-ATP is hydrolyzed into the inactive DnaA-ADP by ... D-loop replication is mostly seen in organellar DNA, Where a triple stranded structure called displacement loop is formed. " ... Bird RE, Louarn J, Martuscelli J, Caro L (October 1972). "Origin and sequence of chromosome replication in Escherichia coli". ... Frimodt-Møller J, Charbon G, Løbner-Olesen A (December 2016). "Control of bacterial chromosome replication by non-coding ...
Death-associated protein 6
Genes on human chromosome 6, Wikipedia articles incorporating text from the United States National Library of Medicine). ... PDBe-KB provides an overview of all the structure information available in the PDB for Human Death domain-associated protein 6 ... "Cloning and expression of primate Daxx cDNAs and mapping of the human gene to chromosome 6p21.3 in the MHC region". DNA Cell ... "PML is critical for ND10 formation and recruits the PML-interacting protein daxx to this nuclear structure when modified by ...
Papillary carcinomas of the breast
These include loses in the long arm of chromosome 16q, loses in the short arm of chromosome 16, gains in the long arm of ... finger-like or leaf-like structures) lined with one or several layers of neoplastic, columnar-shaped epithelial cells (i.e. ... arm of chromosome 16, gains of genetic material in the p (or short) arm of chromosome 16, and gains of genetic material in the ... blunt papillae or ductal structures consisting of neoplastic epithelial cells surrounding a fibrovascular core; 2) papillae ...
EPS8L1
v t e (Articles with short description, Short description matches Wikidata, Genes on human chromosome 19, All stub articles, ... and protein structure". Genomics. 81 (2): 234-44. doi:10.1016/S0888-7543(03)00002-8. PMID 12620401. "Entrez Gene: EPS8L1 EPS8- ...
Auxin binding protein
2002). "Crystal structure of auxin-binding protein 1 in complex with auxin". EMBO J. 21 (12): 2877-85. doi:10.1093/emboj/cdf291 ... "Molecular analysis of an auxin binding protein gene located on chromosome 4 of Arabidopsis". Plant Cell. 4 (2): 193-201. doi: ... They are located in the lumen of the endoplasmic reticulum (ER). The primary structure of these proteins contains an N-terminal ...
CKLF-like MARVEL transmembrane domain-containing 5
The CMTM5 gene is located in band 11.2 on the long (i.e. "q") arm of chromosome 14. The CMTM5 isoforms are members of the CKLF- ... have similar structures but vary in their apparent physiological and pathological functions. Preliminary studies suggest that ...
TENM3
Odz1 to Mouse Chromosome 11; and ODZ3 to Human Chromosome Xq25". Genomics. 58 (1): 102-3. doi:10.1006/geno.1999.5798. PMID ... The primary structure, or amino acid sequence identity, of the proteins between paralogs is ~60% identical and between ... Odz1to Mouse Chromosome 11; and ODZ3 to Human Chromosome Xq25". Genomics. 58 (1): 102-103. doi:10.1006/geno.1999.5798. PMID ... At E8.5, Ten-m3 is expressed at the caudal forebrain, the midbrain region and structures outside of the CNS, including the ...
Halobacterium salinarum
Although chromosomes are initially shattered into many fragments, complete chromosomes are regenerated by making use of over- ... These vesicles are complex structures made of proteins encoded by at least 14 genes. Gas vesicles were first discovered in H. ... NRC-1 genome consists of 2,571,010 base pairs on one large chromosome and two mini-chromosomes. The genome encodes 2,360 ... The large chromosome is very G-C rich (68%). High GC-content of the genome increases stability in extreme environments. Whole ...
Antiparallel (biochemistry)
These structures are normally located at the telomeres (the ends of the chromosomes). The G-quadruplex can either be parallel ... The structure of these G-quadruplexes can be determined by a cation. In DNA, the 5' carbon is located at the top of the leading ... If the DNA structure were to be parallel, the hydrogen bonding would not be possible, as the base pairs would not be paired in ... The antiparallel structure of DNA is important in DNA replication because it replicates the leading strand one way and the ...
Cordon-bleu protein-like 1
Maruyama K, Sugano S (January 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with ... v t e (Articles with short description, Short description is different from Wikidata, Genes on human chromosome 2, All stub ... articles, Human chromosome 2 gene stubs, Cytoskeleton, Cell adhesion proteins). ...
SGCA
Roberds SL, Anderson RD, Ibraghimov-Beskrovnaya O, Campbell KP (Nov 1993). "Primary structure and muscle-specific expression of ... LOVD mutation database: SGCA (Articles with short description, Short description matches Wikidata, Genes on human chromosome 17 ... "Human adhalin is alternatively spliced and the gene is located on chromosome 17q21". Proceedings of the National Academy of ...
WIPI2
Members of the WIPI subfamily of WD40 repeat proteins, such as WIPI2, have a 7-bladed propeller structure and contain a ... v t e (Genes on human chromosome 7, All articles with unsourced statements, Articles with unsourced statements from November ... 2003). "The DNA sequence of human chromosome 7". Nature. 424 (6945): 157-64. Bibcode:2003Natur.424..157H. doi:10.1038/ ... 2021, All stub articles, Human chromosome 7 gene stubs). ...
Genomic imprinting
... on mouse chromosome 17 and KCNQ1OT1 on human chromosome 11p15.5, have been shown to be essential for the imprinting of genes in ... an extraembryonic structure that nourishes the embryo in a manner analogous to the mammalian placenta. Unlike the embryo, the ... but do depend on which parent the chromosome originated from. This group of epigenetic changes that depend on the chromosome's ... Imprinting of whole chromosomes has been reported in mealybugs (Genus: Pseudococcus) and a fungus gnat (Sciara). It has also ...
GNLY
"Granulysin crystal structure and a structure-derived lytic mechanism". Journal of Molecular Biology. 325 (2): 355-365. ... It is part of the saponin-like protein family, and its gene is found on the 2nd chromosome in humans. It is distinguished by ... GNLY gene is located on human chromosome 2 and has 5 exons, which code for a 15 kDa protein. The path to transcription has not ... Houchins JP, Kricek F, Chujor CS, Heise CP, Yabe T, McSherry C, Bach FH (1993). "Genomic structure of NKG5, a human NK and T ...
Sex determination in Silene
Plants with sex-determining chromosomes, like Silene, can develop uni-sexual reproductive structures because of the loss and ... Biologists have found that sex chromosomes in plants originated from pairs of autosomes. As these chromosomes diverge from ... This is made possible through heteromorphic sex chromosomes expressed as XY. Silene recently evolved sex chromosomes 5-10 ... In the case of Silene, the pair of automsomal chromosomes are transformed into heteromorphic sex-determining chromosomes ...
Genome size
I. DNA-content and chromosome sets in various species of Cyprinidae". Humangenetik. 7 (3): 240-244. doi:10.1007/BF00273173. ... A common explanation for these manipulative abilities is their consistently compact and efficient genomic structure. These ...
Partial duplication of the APBA2 gene in chromosome 15q13 corresponds to duplicon structures
... this region adds to a complex picture of different low copy repeats present across this region and elsewhere on the chromosome. ... Partial duplication of the APBA2 gene in chromosome 15q13 corresponds to duplicon structures BMC Genomics. 2003 Apr 29;4(1):15. ... Background: Chromosomal abnormalities affecting human chromosome 15q11-q13 underlie multiple genomic disorders caused by ... this region adds to a complex picture of different low copy repeats present across this region and elsewhere on the chromosome ...
Chromosome Structure and the Mechanism of Crossing Over - NASA/ADS
Can changes in the structure of chromosomes affect health and development?: MedlinePlus Genetics
Changes in the structure of chromosomes can cause problems with growth, development, and function of the bodys systems. Learn ... Changes in chromosome structure include the following:. Translocations. A translocation occurs when a piece of one chromosome ... Ring chromosomes. Ring chromosomes. usually occur when a chromosome breaks in two places, typically at the ends of the p and q ... Can changes in the number of chromosomes affect health and development?. *Can changes in the structure of chromosomes affect ...
Isoform Inference From RNA-Seq Samples Based on Gene Structures on Chromosomes
Here we present a method to identify isoforms by their specific signatures on chromosomes including both exons and junctions. ... Ji, Y. and Wei, J. (2013) Isoform Inference From RNA-Seq Samples Based on Gene Structures on Chromosomes. Journal of ... Isoform Inference From RNA-Seq Samples Based on Gene Structures on Chromosomes () ... Here we present a method to identify isoforms by their specific signatures on chromosomes including both exons and junctions. ...
Talk:Chromosome structure via Euclidean Distance Matrices - Wikimization
KAKEN - Research Projects | Regulation of gene expression and chromosome structure by cohesin (KAKENHI-PROJECT-19710161)
Molecular structure, chromosome assignment, and promoter organization of the human matrix Gla protein gene. | - CCMAR
Molecular structure, chromosome assignment, and promoter organization of the human matrix Gla protein gene.. ... Amino Acid Sequence, Animals, Base Sequence, Calcium-Binding Proteins, Cell Line, Chromosome Mapping, Chromosomes, Human, Pair ... the hMGP cDNA to a series of Chinese Hamster x human hybrid clones assigned this gene to the short arm of the human chromosome ...
GeneLoc Integrated Map for Chromosome 4: Exon structure for KCNIP4-IT1
Gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel Kir 7.1 (KCNJ13). :: MPG.PuRe
Gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel Kir 7.1 (KCNJ13). ... 1998). Gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel Kir 7.1 (KCNJ13). Genomics, ... Gene structure and assignment to chromosome 2q37 of the human inwardly rectifying K+ channel Kir 7.1 (KCNJ13). ...
Transgenerational sterility caused by heritable small RNAs
Importance of cohesin to yeasts 3D chromosome structure The 3D organization of chromosomes plays a role in many biological ... Importance of cohesin to yeasts 3D chromosome structure. *Improving bacterial strain classification for more effective ... Importance of cohesin to yeasts 3D chromosome structure. *Improving bacterial strain classification for more effective ... Hepatitis: 3D structure determination of the gateway to the liver. *Hereditary hearing loss: the ear and auditory brain are ...
Autonomous generation of observation schedules for tracking satellites with structured-chromosome GA optimisation - Projects
...
Chromosomes (article) | Khan Academy
Download Chromatin And Chromosome Structure 1977
... Over the organic Deuteronomic terms, download Chromatin and Chromosome ... download Chromatin and Chromosome Structure in first-order to task 53. victim in pedagogy to step-by-step I. 56. language rules ... Josephus has L1 species to details and counts in his download Chromatin and Chromosome Structure, and his suffering of these ... download Chromatin and Chromosome Structure 1977 demoralizing led, 2010. work, way, sequence, country. developments describe on ...
Structure and Evolution of Chromosome in Fungi
Carrete L., Ksiezopolska E., Pegueroles C., Gomez-Molero E., Saus E., Iraola-Guzman S., Loska D., Bader O., Fairhead C. , Gabaldon T.. (2018) Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans. Current biology : CB, 1 (28) 15-27 e7 ...
Physical Structure of Chromosomes | Sciencing
... about 40 percent of the mass of chromosomes is histones. The structure of a chromosome replicates and divides via mitosis and ... Chromosomes are long, single molecules of DNA attached to proteins called histones, which allow for high degrees of three- ... When chromosomes replicate, the two resulting identical chromatids are joined by a structure called a centromere, which is ... but distinct from the other numbered chromosomes and the sex chromosomes; these are known as homologous chromosomes. ...
Chromosome painting in silico in a bacterial species reveals fine population structure<...
Chromosome painting in silico in a bacterial species reveals fine population structure」の研究トピックを掘り下げます。これらがまとまってユニークなフィンガープリントを構 ... Chromosome painting in silico in a bacterial species reveals fine population structure. In: Molecular Biology and Evolution. ... Chromosome painting in silico in a bacterial species reveals fine population structure. Molecular Biology and Evolution. 2013 ... Chromosome painting in silico in a bacterial species reveals
Chromosome News, Articles and Research - Page 3
... the DNA molecule is packaged into thread-like structures called chromosomes. Each chromosome is made up of DNA tightly coiled ... many times around proteins called histones that support its structure. ... Y chromosome loss in men can lead to deadly heart failure, research shows The loss of the male sex chromosome as many men age ... Sometimes cleaved chromosomes do not recover and genomic stability is compromised - which in the long run might promote cancer ...
A Short History of Medical Genetics - Peter S. Harper - Oxford University Press
Chromosome Segregation & Structure. Terri Grodzicker, David Stewart, and Bruce Stillman * Handbook of Physical Measurements. ... 5. Human Chromosomes. 6. Human Biochemical Genetics. 7. The Human Gene Map. 8. Genes, Populations and Human Inherited Disorders ... 5. Human Chromosomes. 6. Human Biochemical Genetics. 7. The Human Gene Map. 8. Genes, Populations and Human Inherited Disorders ... the identification of the first human chromosome abnormalities; and up through the completion of the Human Genome project, this ...
GeneLoc Integrated Map for Chromosome 21: Exon structure for ENSG00000229047
What is the round structures inside the hydrilla cells? - Answers
What structures do bacteria have?. Bacteria cells are like plant cells because the have a cell wall. But they dont have a ... are small, round structures in cells that break down large food particles into smaller ones. The answer is lysosomes. ;) ... are small, round structures in cells that break down large food particles into smaller ones. The answer is lysosomes. ;) ... Small round structures in cells that break down large food particles into smaller ones?. the answer is lysosomes ...
Activation of macrophages, key agents in immune response
Importance of cohesin to yeasts 3D chromosome structure The 3D organization of chromosomes plays a role in many biological ... Importance of cohesin to yeasts 3D chromosome structure. *Improving bacterial strain classification for more effective ... Importance of cohesin to yeasts 3D chromosome structure. *Improving bacterial strain classification for more effective ... Hepatitis: 3D structure determination of the gateway to the liver. *Hereditary hearing loss: the ear and auditory brain are ...
talks.cam : Telomere-to-Telomere Chromosome Assemblies: New Insights Into Genome Biology & Structure
Telomere-to-Telomere Chromosome Assemblies: New Insights Into Genome Biology & Structure. Add to your list(s) Download to your ... University of Cambridge , Talks.cam , Genetics Seminar , Telomere-to-Telomere Chromosome Assemblies: New Insights Into Genome ... to comprehensively the genomic structure and epigenetic organization in the most repeat-dense regions of our chromosomes. In ... We are entering into an exciting era of genomics where truly complete, high-quality assemblies of human chromosomes are ...
DNA structure, genes and chromosomes MCQ - 1 - LaNts and Laminins
... genes and chromosomes. The questions are designed to start quite easy but become more difficult as you progress to later ... DNA structure, genes and chromosomes MCQ - 1. Welcome to this MCQ on DNA, genes and chromosomes. The questions are designed to ... you can see three copies of chromosome 7… "trisomy" and you can see two X chromosomes and no Y chromosome, therefore female, ... trisomy chromosome 7. Gorillas and orangutans are very similar in terms of genetics but actually have 48 chromosomes in a ...
Transgenerational epigenetic inheritance of chromatin states : the role of Polycomb and 3D chromosome architecture | 3DEpi...
Punnett Squares - Maple Help
... they are packaged into thread-like structures called chromosomes . Diploid organisms, such as humans, have chromosomes... ... they are packaged into thread-like structures called chromosomes. Diploid organisms, such as humans, have chromosomes that come ... with each parent contributing one chromosome per homologous pair. Each chromosome in a given homologous pair represents the ... in homologous pairs (except for the sex chromosomes), ...
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Competition and phylogeny determine community structure in Müllerian co-mimics | Nature
More generally, our work demonstrates that competition for resources is likely to have a dominant role in the structuring of ... Here we show that resource partitioning and phylogeny determine community structure and outweigh the positive effects of ... has dominated our understanding of community structure, maintenance and assembly1. Nevertheless, a recent theoretical model ... Chromosomes of Asian cyprinid fishes: cytogenetic analysis of two representatives of small paleotetraploid tribe Probarbini * ...
Sex in Relation to Chromosomes and Genes | Semantic Scholar
Many botanists formerly thought that a diploid number of chromosomes was the cause of sporophytic expression and a haploid ... The structure and function of the sex chromosomes in man.. *M. D. Hayward ... Sex in Relation to Chromosomes and Genes. @article{Bridges1925SexIR, title={Sex in Relation to Chromosomes and Genes}, author={ ... Structure, function and evolution of sex-determining systems in Dipteran insects.. *C. Schütt, R. Nöthiger ...
Mutation - Wikipedia
Large scale changes to the structure of chromosomes called chromosomal rearrangement that can lead to a decrease of fitness but ... Changes in chromosome number may involve even larger mutations, where segments of the DNA within chromosomes break and then ... For example, in the Homininae, two chromosomes fused to produce human chromosome 2; this fusion did not occur in the lineage of ... As the function of a RNA molecule is dependent on its structure [113], the structure of RNA molecules is evolutionarily ...
MitosisChromosomalNucleusProteinsGeneticsOrganismTelomeresAbnormalitiesGenes or chromosomesGreat ape Y ChromosomeSeparate chromosomesLocusGenomicMitoticHaploidHomologous chromosomesHumansDeletionPairsThreadlikeMaps to chromosomeExtra chromosomeCellTranslocationsCentromeresEukaryoticInheritanceTrisomyCircularDefectsGenetic materialProteinSequenceConformationAbnormal1977PairSegregationPolyploidyCentromereArtificialEndoplasmic reticulumHuman genomeCopiesBacteriaMtDNAAlterationsNucleiOrganismsDefinitionBiologyChromatin structureSequences
Mitosis4
- Injection of anticentromere antibodies in interphase disrupts events required for chromosome movement at mitosis. (cell.com)
- Centromeric nucleosomes are at the interface of the chromosome and the kinetochore that connects to spindle microtubules in mitosis. (rcsb.org)
- At mitosis, we propose that CCNC asymmetry accommodates its asymmetric connections at the chromosome/kinetochore interface. (rcsb.org)
- Mitosis in P. pallidum is similar to that in D. discoideum except that a metaphase plate configuration is rare and that it has more chromosomes ( n = 11 or 12) than D. discoideum ( n = 7). (microbiologyresearch.org)
Chromosomal12
- Chromosomal abnormalities affecting human chromosome 15q11-q13 underlie multiple genomic disorders caused by deletion, duplication and triplication of intervals in this region. (nih.gov)
- With this approach, we demonstrate that transposons engage in long-range intra-chromosomal interactions guided by the separation of chromosomes into A and B compartments as well as topologically associated domains (TADs). (springer.com)
- Gene structure, chromosomal distribution, tissue specific expression, conserved domain, and phylogenetic analyses of SOD genes were carried out. (tubitak.gov.tr)
- Chromosomal distributions revealed that the highest number of SOD genes was on chromosomes 1 and 10, with 2 members on each. (tubitak.gov.tr)
- The researchers applied a method called 'Hi-C' (High-throughput Chromosome Conformation Capture) to samples from patients with developmental disorders suspected to be caused by chromosomal rearrangements. (mpg.de)
- The classical analysis of chromosomal defects is done by a karyogram, which is a microscopic view of stained chromosomes. (mpg.de)
- As a major form of genomic instability, chromosomal instability comprises aberrant chromosome numbers (i.e., aneuploidy or polyploidy) and structural changes in chromosomes. (frontiersin.org)
- Chromosome imbalance caused by the absence or duplication of chromosomal material most often results in spontaneous abortion. (medscape.com)
- There are 2 basic types of chromosomal imbalance: aberrations in chromosome numbers (numerical abnormalities) and defects in chromosome structure (structural anomalies). (medscape.com)
- Numerical chromosomal abnormalities (aneuploidies) -- the presence of an extra chromosome (trisomy) or a missing chromosome (monosomy) -- result from segregation errors during cell division: Chromosomes do not divide evenly among daughter cells (nondisjunction) (see Fig. 2). (medscape.com)
- Structural chromosomal anomalies are different from numerical anomalies in that they consist of a defect in the structure of 1 or more chromosomes. (medscape.com)
- In the case of a numerical chromosomal anomaly in a fetus, parental chromosomes are usually normal, so karyotype analysis of the parents is not indicated. (medscape.com)
Nucleus8
- Chromosomes are threadlike containers of genetic information that inhabit the nuclei (singular: nucleus) of cells. (sciencing.com)
- As part of the mechanisms involved, PREs are thought to mediate this transcriptional memory function by building up higher-order structures in the nucleus. (edu.sa)
- Structure in a cell's nucleus that contains heredity. (flashcardmachine.com)
- Chromosomes are stick-like structures in the center (nucleus) of each cell. (uhhospitals.org)
- In addition, changes of the structure of chromosome terriories or whole human genome in the cell nucleus during differentiation and cancerogenesis will be determined and an attempt will be made to find the basic psrinciples of the epigenetic regulation of gene expression. (muni.cz)
- Each cell (except for red blood cells) contains a nucleus that houses these chromosomes. (cdc.gov)
- nucleus, chromosomes - basic structure, number. (cbseexpert.com)
- The chromosomes may be seen, and the nucleus is rather massive. (risingacademy.org)
Proteins9
- These changes can affect many genes along the chromosome and disrupt the proteins made from those genes. (medlineplus.gov)
- The structure, function and synthesis of proteins, RNA and DNA and their interrelated biological functions within the cell. (sfu.ca)
- We found that, in the repressed state, all major elements that have been shown to bind PcG proteins, including PREs and core promoters, interact at a distance, giving rise to a topologically complex structure. (edu.sa)
- We show that this structure is important for epigenetic silencing of the BX-C, as we find that major changes in higher-order structures must occur to stably maintain alternative transcription states, whereas histone modification and reduced levels of PcG proteins determine an epigenetic switch that is only partially heritable. (edu.sa)
- Chromatin architectural proteins interact with nucleosomes to modulate chromatin accessibility and higher-order chromatin structure. (biomedcentral.com)
- Specialized cell structures called ribosomes are the cellular organelles that actually synthesize the proteins (RNA transcription). (cdc.gov)
- The possible evolutionary pathways that cellular proteins and structures could have taken in this time is tremendous, and it is no wonder that reconstructing these pathways stretches the human imagination. (theness.com)
- The goal of her current research is to use two highly innovative and complementary single-molecule imaging techniques (atomic force microscopy and fluorescence imaging) together with quantum dot labeled proteins to investigate the effects of DNA damage on the conformational and dynamic properties of telomeric DNA structure and telomere binding proteins. (ncsu.edu)
- Most cells contain ribosomes , which are structures that combine amino acids to create proteins. (visiblebody.com)
Genetics6
- The Centre for Genetics Education provides a fact sheet about chromosome changes . (medlineplus.gov)
- The University of Leicester's Virtual Genetics Education Center provides an explanation of structural chromosome aberrations . (medlineplus.gov)
- Gorillas and orangutans are very similar in terms of genetics but actually have 48 chromosomes in a diploid cell rather than 46 (essentially difference is chromosome 2 in humans becomes two separate chromosomes). (lantsandlaminins.com)
- The development and application of new techniques for the study of human chromosomes has revealed that the genetics of sex determination in man appears to be different from any other system so far known and may still be accommodated within the limits of a balance theory. (semanticscholar.org)
- Ongoing work includes integration of information to allow navigation via comparative genomics from genetics loci to chromosome, and development of crop genetics databases. (edu.au)
- A structured genetics rotation for pediatric residents: an important educational opportunity. (cdc.gov)
Organism4
- A bacterium is a unicellular organism, or prokaryote, with a relatively simple cell structure. (si.edu)
- Behe also makes other unspoken assumptions in his reasoning - namely that structures must work well or efficiently in order to be of value to the organism. (theness.com)
- Also, he assumes that while a structure is evolving through necessarily useless stages, it would be a detriment to the organism since it would not serve any useful function. (theness.com)
- Fixing and staining, however, offer a deeper grasp of the shape and structure of the organism. (risingacademy.org)
Telomeres5
- Telomeres are a protective nucleoprotein structure at each chromosome end. (cdc.gov)
- The ends of chromosomes are marked with DNA sequences called telomeres. (giantmicrobes.com)
- Her research focuses on single-molecule experimental investigations of the structure-function relationships that govern the maintenance of telomeres. (ncsu.edu)
- Telomeres are nucleoprotein structures that cap the ends of linear chromosomes. (ncsu.edu)
- Telomeres are small structures that protect the ends of your chromosomes. (hilfenetzwerk-cic.de)
Abnormalities4
- The National Human Genome Research Institute provides a list of questions and answers about chromosome abnormalities , including a glossary of related terms. (medlineplus.gov)
- This resource includes illustrated explanations of several chromosome abnormalities. (medlineplus.gov)
- Your Genome from the Wellcome Genome Campus discusses chromosome disorders , including types of structural abnormalities in chromosomes that are involved in genetic diseases. (medlineplus.gov)
- The syndrome is caused by changes in the structure and function of certain cardiac ion channels and reduced expression of Connexin 43 (Cx43) in the Right Ventricle (RV), predominantly in the Right Ventricular Outflow Tract (VSVD), causing electromechanical abnormalities. (bvsalud.org)
Genes or chromosomes2
Great ape Y Chromosome2
- Great ape Y Chromosome and mitochondrial DNA phylogenies reflect subspecies structure and patterns of mating and dispersal. (anthropogeny.org)
- Researchers have reconstructed the ancestral sequence of the great ape Y chromosome by comparing three existing (gorilla, human, and chimpanzee) and two newly generated (orangutan and bonobo) Y chromosome assemblies. (scitechdaily.com)
Separate chromosomes1
- this fusion did not occur in the lineage of the other apes , and they retain these separate chromosomes. (wikipedia.org)
Locus5
- A novel locus for Meckel-Gruber syndrome, MKS3, maps to chromosome 8q24. (nature.com)
- To address this question, we analysed in vivo the three-dimensional structure of the homeotic locus bithorax complex (BX-C) by combining chromosome conformation capture (3C) with fluorescent in situ hybridization (FISH) and FISH immunostaining (FISH-I) analysis. (edu.sa)
- A unique locus for an autosomal dominant form of adult-onset PLS in a large French-Canadian family was mapped to chromosome 4ptel-4p16.1. (medscape.com)
- gene, unit of hereditary information that occupies a fixed position (locus) on a chromosome. (genome101.com)
- A set of 56 SNP locus/phenotype associations was identified and the genomic regions harboring these loci were distributed over nine of the 12 eggplant chromosomes. (biomedcentral.com)
Genomic5
- Sometimes cleaved chromosomes do not recover and genomic stability is compromised - which in the long run might promote cancer. (news-medical.net)
- This technological advance, crediting the confluence of new assembly methods with long read sequencing technologies, offers a new opportunity to comprehensively the genomic structure and epigenetic organization in the most repeat-dense regions of our chromosomes. (cam.ac.uk)
- Using whole genomic sequencing, the complete deletion was mapped to chromosome 6 (60,678,870-61,037,354), a slightly smaller deletion region than that previously reported in the C57BL/6J substrain maintained by Envigo. (nature.com)
- The Y chromosome is important for male fertility and contains the genes critical for sperm production, but it is often neglected in genomic studies because it is so difficult to sequence and assemble," said Monika Cechova, a graduate student at Penn State at the time of the research and co-first author of the paper. (scitechdaily.com)
- One of the main directions of human genome research in the post-genomic eta is the study of its higher-order structure that became the key to understanding of the most important cellular processes such as cell differentiation or transformation. (muni.cz)
Mitotic6
- Contribution of advanced fluorescence nano microscopy towards revealing mitotic chromosome structure. (bvsalud.org)
- To address this long-standing problem, development of advanced imaging methods has played an essential role in providing understanding into mitotic chromosome structure and compaction. (bvsalud.org)
- Here, we discuss the advantages and limitations of both methods followed by their contribution to mitotic chromosome studies. (bvsalud.org)
- Techniques used previously to examine the mitotic chromosomes of Dictyostelium discoideum have been applied to the cellular slime mould Polysphondylium pallidum. (microbiologyresearch.org)
- Low concentrations of benzimidazole derivatives (thiabendazole, cambendazole, ben late and nocodazole) caused the arrest of cell division, mitotic indices greater than 50%, chromosome doubling and lowered plating efficiency. (microbiologyresearch.org)
- Rapid degradation of condensin I and condensin II - two essential regulators of mitotic chromosome structure - revealed that both complexes are individually required for cell division in precursor lymphocytes, but not in their differentiated peripheral lymphocyte derivatives. (elifesciences.org)
Haploid1
- Homologous chromosomes, sister chromatids, and haploid/diploid. (khanacademy.org)
Homologous chromosomes1
- these are known as homologous chromosomes. (sciencing.com)
Humans5
- Dresden and Leipzig researchers find that stem cells in the developing brain of modern humans take longer to divide and make fewer errors when distributing their chromosomes to their daughter cells, compared to those of Neanderthals. (news-medical.net)
- Humans have 23 pairs of chromosomes in every cell except for the gametes, which are the "sex cells" that fuse to form "typical" cells in the process of reproduction. (sciencing.com)
- Diploid organisms, such as humans, have chromosomes that come in homologous pairs (except for the sex chromosomes), with each parent contributing one chromosome per homologous pair. (maplesoft.com)
- A clearer picture of the evolution of the Y chromosome is important for studying male fertility in humans as well as our understanding of reproduction patterns and the ability to track male lineages in the great apes, which can help with conservation efforts for these endangered species. (scitechdaily.com)
- If you just compare the sequence identity-comparing the As, Ts, Cs, and Gs of the chromosomes-humans are more similar to chimpanzees, as you would expect," said Kateryna Makova, Pentz Professor of Biology at Penn State and one of the leaders of the research team. (scitechdaily.com)
Deletion1
- FISH mapping further narrowed the region of deletion of chromosome 4 to 39.6 centimorgans (cM) and the region of duplication to 10-35 cM. (cdc.gov)
Pairs8
- These 23 pairs include 22 pairs of chromosomes simply numbered 1 through 22 and a pair of sex chromosomes, which are X and Y in males and X and X in females. (sciencing.com)
- Most people have 23 pairs of chromosomes - half are from your mom and half are from your dad - for a total of 46. (kidshealth.org)
- Most human cells have two pairs of 23 chromosomes, one pair from your mother and the other from your father, for a total of 46 chromosomes. (giantmicrobes.com)
- DNA is so tightly wound in each chromosome that the entire human genetic code of 3 billion base pairs fits in an area of just 6 microns, 10 times smaller than the diameter of hair! (giantmicrobes.com)
- 23 pairs of chromosomes. (cdc.gov)
- Sep 22, 2022 Telomere vesicles retained the Rad51 recombination factor that enabled telomere fusion with T-cell chromosome ends lengthening them by an average of 3,000 base pairs. (hilfenetzwerk-cic.de)
- A human chromosome can have up to 500 million base pairs of DNA with thousands of genes. (genome101.com)
- There are 23 pairs of chromosomes in the cell of human body. (solutionsclass.com)
Threadlike1
- Chromosomes are threadlike structures inside of cells that store genetic information. (giantmicrobes.com)
Maps to chromosome2
- A gene for Meckel syndrome maps to chromosome 11q13. (nature.com)
- Blast-1 possesses a glycosyl-phosphatidylinositol (GPI) membrane anchor, is related to LFA-3 and OX-45, and maps to chromosome 1q21-23. (hcdm.org)
Extra chromosome2
- But a baby with Down syndrome has an extra chromosome (47 instead of 46) or one chromosome has an extra part. (kidshealth.org)
- Arrow indicates extra chromosome. (medscape.com)
Cell15
- 2010) Ab initio reconstruction of cell type-specific transcriptomes in mouse reveals the con-served multi-exonic structure of lincRNAs. (scirp.org)
- Right after a cell divides along with every one of its chromosomes, it contains a single copy of all 46 of its individual chromosomes. (sciencing.com)
- Karyotyping is done at metaphase as this is the only stage of the cell cycle when chromosomes are condensed and lined up. (lantsandlaminins.com)
- They're thread-like structures within each cell and are made up of genes. (kidshealth.org)
- A cell with one of every kind of chromosome. (flashcardmachine.com)
- The medial portion of chromosome 4 was deleted in 67% of all of the cell Strains. (cdc.gov)
- Duplication of the proximal region of chromosome 4 occurred in 22% of the spontaneously-occurring high-invasive cells strains and 83% of the chemically-induced high-invasive cell culrures. (cdc.gov)
- Mouse chromosome 1 and 15 were amplified in 90% of the high-invasive cell strains. (cdc.gov)
- Radiation can disrupt the structure of the DNA (and other macromolecules), thereby disrupting normal cell and organ functions. (cdc.gov)
- For example, children with Down syndrome can be born with a heart defect and Down syndrome is a genetic condition in which children have extra genetic material known as chromosome number 21 in every cell of their body, and it's thought that this extra genetic material causes the infant's heart not to develop normally during the pregnancy. (cdc.gov)
- We and other multicellular organisms contain billions or trillions of cells organized into complex structures, but many organisms consist of a single cell. (alloteacher.com)
- 2012). In chromosome segregation must start prior to the cytokinetic Z-ring can assemble at mid-cell, coordinated with BKM120 biological activity the gradient-forming FtsZ BKM120 biological activity inhibitor MipZ (Thanbichler and Shapiro, 2006). (biobender.com)
- The 23rd pair in gonadal cell called sex chromosome which is not always a perfect pair. (solutionsclass.com)
- Structures inside the cell are suspended in the cytosol. (visiblebody.com)
- We actually can cure AIDS and cancer with RA SHIELD, since these two diseases are caused by the failure in crystallization of Chromosomes due to failure of Wave Optics during cell division (so-called translocation, transposition, deletions, and other structural defects of chromosomes). (wordpress.com)
Translocations2
- The structural chromosome alterations may arise at the chromosome level (e.g., translocations and gains or losses of large portions of chromosomes) or at the nucleotide level, which influence gene structure or expression such as mutations, insertions, deletions, gene amplifications, and gene silencing by epigenetic effects ( Jefford and Irminger-Finger, 2006 ). (frontiersin.org)
- Examples include inversions (part of a chromosome is turned around), rings (a chromosome forms a ring structure), and translocations (parts of chromosomes in the wrong location). (medscape.com)
Centromeres1
- In addition, we used indirect immunofluorescence to demonstrate that these antibodies recognize centromeres of HeLa chromosomes in the expected pattern for CENP-C. Localization of CENP-C by immunoelectron microscopy reveals that this protein is a component of the inner kinetochore plate. (cell.com)
Eukaryotic3
- Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (nih.gov)
- Eukaryotic DNA is packaged into chromatin, a highly compacted structure made up of repeating nucleosome units. (biomedcentral.com)
- Eukaryotic cells contain smaller structures, called organelles , that help it carry out these functions. (visiblebody.com)
Inheritance2
- a specific sequence of nucleotides in DNA or RNA that is located usually on a chromosome and that is the functional unit of inheritance controlling the transmission and expression of one or more traits by specifying the structure of a particular polypeptide and especially a protein or controlling the function of other genetic material. (genome101.com)
- Chromosomes and Inheritance. (bcgcertification.org)
Trisomy1
- you can see three copies of chromosome 7… "trisomy" and you can see two X chromosomes and no Y chromosome, therefore female, trisomy chromosome 7. (lantsandlaminins.com)
Circular5
- usually occur when a chromosome breaks in two places, typically at the ends of the p and q arms, and then the arms fuse together to form a circular structure. (medlineplus.gov)
- Yeast centromere DNA is in a unique and highly ordered structure in chromosomes and small circular minichromosomes. (cell.com)
- Bacterial DNA is usually organized into a single circular chromosome. (si.edu)
- The large circular structure is the eye, showing the structure of the retina. (cellimagelibrary.org)
- Instead, their DNA can be found in the cytoplasm in a region called the nucleoid or in circular chromosomes called plasmids. (visiblebody.com)
Defects2
Genetic material6
- occur when a chromosome breaks and some genetic material is lost. (medlineplus.gov)
- Genetic material may or may not be lost as a result of the chromosome breaks. (medlineplus.gov)
- These structures are unstable and often involve a loss of some genetic material. (medlineplus.gov)
- In many cases, genetic material near the ends of the chromosome is lost. (medlineplus.gov)
- Only eukaryotes have nuclei, and so the genetic material of bacteria, which like that of all living things consists of DNA, exists in the cytoplasm of bacteria cells as a singular, ring-shaped "chromosome. (sciencing.com)
- Due to their evolutionary descent from bacteria, mitochondria still have genetic material packaged in chromosome-like structures (nucleoids). (phys.org)
Protein10
- Molecular structure, chromosome assignment, and promoter organization of the human matrix Gla protein gene. (ualg.pt)
- Researchers from the National Institutes of Health have developed a three-dimensional structure that allows them to see how and where disease mutations on the twinkle protein can lead to mitochondrial diseases. (news-medical.net)
- In fact, a chromosome is nothing more than one very long strand of DNA (called chromatin) bound to a protein called histones. (sciencing.com)
- Each chromosome in its non-replicated state consists of a single chromatid, which is simply a very long DNA molecule to which are attached a great many histone protein molecule complexes. (sciencing.com)
- A 47-kd human nuclear protein recognized by antikinetochore autoimmunesera is homologous with the protein encoded by RCC1, a gene implicated in onset of chromosome condensation. (cell.com)
- 1PUL: Solution structure for the 21KDa caenorhabditis elegans protein CE32E8.3. (rcsb.org)
- Solution structure for the 21KDa caenorhabditis elegans protein CE32E8.3. (rcsb.org)
- His team have shown that chemical or environmental stress detaches a protein called activating transcription factor 2 (ATF-2) from chromatin, the densely packed DNA that makes up chromosomes. (newscientist.com)
- Additionally, 3-dimensional structures were determined and compared within each SbSOD protein. (tubitak.gov.tr)
- Which of the following structures is composed of DNA and protein? (studyinnovations.com)
Sequence4
- We have studied replication throughout 325 kb of the telomeric region of a human chromosome (16p13.3) and related the findings to various aspects of chromosome structure and function (DNA sequence organization, nuclease-hypersensitive sites, nuclear matrix attachment sites, patterns of methylation and gene expression). (ox.ac.uk)
- This has previously been investigated by sequencing autosomal and mitochondrial DNA (mtDNA), but large-scale sequence analysis of the male-specific region of the Y Chromosome (MSY) has not yet been undertaken. (anthropogeny.org)
- New analysis of the DNA sequence of the male-specific Y chromosomes from all living species of the great ape family helps to clarify our understanding of how this enigmatic chromosome evolved. (scitechdaily.com)
- While all DNA is stained blue, a specific sequence stained pink appears duplicated in one of the two copies of chromosome 17, but not the other. (mpg.de)
Conformation2
- Using PCR and Capture-based chromosome conformation capture (3C) approaches, collectively called 4Tran, we take advantage of the repetitive nature of transposons to capture interactions from multiple copies of endogenous retrovirus (ERVs) in the human and mouse genomes. (springer.com)
- With the development of chromosome conformation capture (3C) techniques that rely on crosslinking of chromatin in close spatial proximity, additional levels of organization have been described. (springer.com)
Abnormal3
- As a result, these abnormal chromosomes have an extra copy of some genes and are lacking copies of genes on the missing arm. (medlineplus.gov)
- Dicentric chromosomes result from the abnormal fusion of two chromosome pieces, each of which includes a centromere. (medlineplus.gov)
- Most embryos stop developing and perish within days of fertilization, usually because they have an abnormal number of chromosomes. (news-medical.net)
19771
- Over the organic Deuteronomic terms, download Chromatin and Chromosome Structure 1977 Readers, civil good RNA and different download according terms and Features Research please happened a impairment of philosophy about the pp. of study computations and their attributes. (bcvsolutions.com)
Pair5
- Each chromosome in a given homologous pair represents the same genes, but with different expressions (called alleles ) of those genes. (maplesoft.com)
- A pair of stained chromosomes under the microscope. (mpg.de)
- It cause loss of one chromosome out of a pair. (nanavatimaxhospital.org)
- Women have a perfect pair having XX - chromosomes. (solutionsclass.com)
- But men have a pair having XY-chromosomes. (solutionsclass.com)
Segregation1
- this is been shown to be the entire case for MatP, which coordinates chromosome segregation and pole structure in (Coltharp et?al. (biobender.com)
Polyploidy1
- Polyploidy refers to the presence of an extra set of chromosomes. (medscape.com)
Centromere1
- The ring may or may not include the centromere, depending on where on the chromosome the breaks occur. (medlineplus.gov)
Artificial1
- The natural centromeric DNA path in our structures corresponds to symmetric surfaces for CCNC assembly, deviating from what is observed in prior structures using artificial sequences. (rcsb.org)
Endoplasmic reticulum1
- Where are the structures that distinguish rough endoplasmic reticulum from smooth endoplasmic reticulum produced? (studyinnovations.com)
Human genome1
- Recently, a method of chromosome painting in silico has been developed to overcome these shortcomings and has been applied to multiple human genome sequences. (elsevier.com)
Copies1
- CENP-C CM is thought to engage a neighboring nucleosome, either one containing conventional H3 or CENP-A, and a crystal structure of a nucleosome complex containing two copies of CENP-C CM was reported. (rcsb.org)
Bacteria1
- The team began by looking for patterns in this cloverleaf structure, using detailed data from hundreds of molecules representing viruses and each of the three superkingdoms of life: archaea, bacteria and eukarya. (phys.org)
MtDNA4
- Around 7.000 y.a., human populations from the entire world went through a strong decrease of Y chromosome diversity compared to mtDNA. (openedition.org)
- In order to confront this scenario to other hypotheses, we developed a model of populations displaying different descent and residence rules, with or without competition between lineages, and for each scenario, we computed diversity estimators on the Y chromosome and mtDNA. (openedition.org)
- Obtained results suggest that if violent competition between lineages strongly decreases diversity on the Y chromosome, patrilineality alone generates a major bottleneck on the Y chromosome with respect to mtDNA. (openedition.org)
- Using phylogeographic, population structure and spatial genetic analyses of Y-chromosome and mtDNA data, we inferred the genetic relationships among Uros populations (Los Uros from Peru, Uru-Chipaya and Uru-Poopo from Bolivia), and compared their haplotype profiles with eight Aymara, nine Quechua and two Arawak (Machiguenga and Yanesha) speaking populations from Peru and Bolivia. (umsa.bo)
Alterations2
- Amelogenesis imperfecta (AI) refers to a group of genetic alterations of the normal structure of the dental enamel that disturbs its clinical appearance. (bvsalud.org)
- Multi-institutional experience of genetic diagnosis in Ecuador: National registry of chromosome alterations and polymorphisms. (cdc.gov)
Nuclei1
- Light micrograph of onion (Allium cepa) root tip cells stained with acetocarmine to show nuclei and chromosomes. (cellimagelibrary.org)
Organisms1
- Within organisms , genetic information generally is carried in chromosomes , where it is represented in the chemical structure of particular DNA molecules . (wikipedia.org)
Definition1
- The term "atrophy" is a misnomer, since, in its strict histologic definition, atrophy implies involution of a structure due to prolonged disuse. (medscape.com)
Biology2
- The results reveal several puzzling aspects of Drosophila dot chromosome biology to be possible remnants of its former life as a sex chromosome, such as its minor feminizing role in sex determination or its targeting by a chromosome-specific regulatory mechanism. (semanticscholar.org)
- The organization of chromatin into higher-order structures and its condensation process represent one of the key challenges in structural biology . (bvsalud.org)
Chromatin structure4
- Analysis of the timing of replication in chromosomes with deletions, or in transgenes containing various segments of this telomeric region, suggests that there are no critical origins or zones that initiate replication, rather the pattern of replication appears to be related to the underlying chromatin structure which may restrict or facilitate access to multiple, redundant origins. (ox.ac.uk)
- Once it is detached, the chromatin structure physically opens up, enabling otherwise hidden genes to become active. (newscientist.com)
- Collectively, our data suggest that dynamic and mutually exclusive binding of H1 and HMGD1 to nucleosomes and their linker sequences may control the fluid chromatin structure that is required for transcriptional regulation. (biomedcentral.com)
- Despite suggestive evidence of a relationship between HMGs and H1, their genome-wide distributions are not known and a clear understanding of how they are related to chromatin structure and gene expression is lacking. (biomedcentral.com)
Sequences3
- The duplication of APBA2 sequences in this region adds to a complex picture of different low copy repeats present across this region and elsewhere on the chromosome. (nih.gov)
- A team of biologists and computer scientists at Penn State sequenced and assembled the Y chromosome from orangutan and bonobo and compared those sequences to the existing human, chimpanzee, and gorilla Y sequences. (scitechdaily.com)
- The Y chromosome contains a lot of repetitive sequences, which are challenging for DNA sequencing, assembling sequences, and aligning sequences for comparison. (scitechdaily.com)