Chaperonin Containing TCP-1
Chaperonin 10
Chaperonin 60
A group I chaperonin protein that forms the barrel-like structure of the chaperonin complex. It is an oligomeric protein with a distinctive structure of fourteen subunits, arranged in two rings of seven subunits each. The protein was originally studied in BACTERIA where it is commonly referred to as GroEL protein.
Chaperonins
A family of multisubunit protein complexes that form into large cylindrical structures which bind to and encapsulate non-native proteins. Chaperonins utilize the energy of ATP hydrolysis to enhance the efficiency of PROTEIN FOLDING reactions and thereby help proteins reach their functional conformation. The family of chaperonins is split into GROUP I CHAPERONINS, and GROUP II CHAPERONINS, with each group having its own repertoire of protein subunits and subcellular preferences.
Group II Chaperonins
t-Complex Genome Region
A 20 cM region of mouse chromosome 17 that is represented by a least two HAPLOTYPES. One of the haplotypes is referred to as the t-haplotype and contains an unusual array of mutations that affect embryonic development and male fertility. The t-haplotype is maintained in the gene pool by the presence of unusual features that prevent its recombination.
Thiosulfate Sulfurtransferase
Group I Chaperonins
Malate Dehydrogenase
Gram-Positive Asporogenous Rods, Irregular
Adenosine Triphosphate
Protein Refolding
Heat-Shock Proteins
Molecular Chaperones
Escherichia coli
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
Ribulose-Bisphosphate Carboxylase
A carboxy-lyase that plays a key role in photosynthetic carbon assimilation in the CALVIN-BENSON CYCLE by catalyzing the formation of 3-phosphoglycerate from ribulose 1,5-biphosphate and CARBON DIOXIDE. It can also utilize OXYGEN as a substrate to catalyze the synthesis of 2-phosphoglycolate and 3-phosphoglycerate in a process referred to as photorespiration.
Protein Conformation
The characteristic 3-dimensional shape of a protein, including the secondary, supersecondary (motifs), tertiary (domains) and quaternary structure of the peptide chain. PROTEIN STRUCTURE, QUATERNARY describes the conformation assumed by multimeric proteins (aggregates of more than one polypeptide chain).
Methanococcus
Thermococcus
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
Protein Denaturation
Sulfolobus
Amino Acid Sequence
Adenosine Triphosphatases
Protein Binding
Protein Subunits
Models, Molecular
Cryoelectron Microscopy
Eukaryotic Cells
Adenylyl Imidodiphosphate
5'-Adenylic acid, monoanhydride with imidodiphosphoric acid. An analog of ATP, in which the oxygen atom bridging the beta to the gamma phosphate is replaced by a nitrogen atom. It is a potent competitive inhibitor of soluble and membrane-bound mitochondrial ATPase and also inhibits ATP-dependent reactions of oxidative phosphorylation.
Adenosine Diphosphate
Alcohol Dehydrogenase
3-Isopropylmalate Dehydrogenase
Tubulin
A microtubule subunit protein found in large quantities in mammalian brain. It has also been isolated from SPERM FLAGELLUM; CILIA; and other sources. Structurally, the protein is a dimer with a molecular weight of approximately 120,000 and a sedimentation coefficient of 5.8S. It binds to COLCHICINE; VINCRISTINE; and VINBLASTINE.
Sequence Homology, Amino Acid
Archaea
One of the three domains of life (the others being BACTERIA and Eukarya), formerly called Archaebacteria under the taxon Bacteria, but now considered separate and distinct. They are characterized by: (1) the presence of characteristic tRNAs and ribosomal RNAs; (2) the absence of peptidoglycan cell walls; (3) the presence of ether-linked lipids built from branched-chain subunits; and (4) their occurrence in unusual habitats. While archaea resemble bacteria in morphology and genomic organization, they resemble eukarya in their method of genomic replication. The domain contains at least four kingdoms: CRENARCHAEOTA; EURYARCHAEOTA; NANOARCHAEOTA; and KORARCHAEOTA.
Thermus thermophilus
Aeropyrum
Citrate (si)-Synthase
Macromolecular Substances
Substrate Cycling
A set of opposing, nonequilibrium reactions catalyzed by different enzymes which act simultaneously, with at least one of the reactions driven by ATP hydrolysis. The results of the cycle are that ATP energy is depleted, heat is produced and no net substrate-to-product conversion is achieved. Examples of substrate cycling are cycling of gluconeogenesis and glycolysis pathways and cycling of the triglycerides and fatty acid pathways. Rates of substrate cycling may be increased many-fold in association with hypermetabolic states resulting from severe burns, cold exposure, hyperthyroidism, or acute exercise.
Proteins
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.
Electrophoresis, Polyacrylamide Gel
Methanobacterium
Multiprotein Complexes
Base Sequence
Anilino Naphthalenesulfonates
Guanidine
A strong organic base existing primarily as guanidium ions at physiological pH. It is found in the urine as a normal product of protein metabolism. It is also used in laboratory research as a protein denaturant. (From Martindale, the Extra Pharmacopoeia, 30th ed and Merck Index, 12th ed) It is also used in the treatment of myasthenia and as a fluorescent probe in HPLC.
Urea
Protein Structure, Tertiary
The level of protein structure in which combinations of secondary protein structures (alpha helices, beta sheets, loop regions, and motifs) pack together to form folded shapes called domains. Disulfide bridges between cysteines in two different parts of the polypeptide chain along with other interactions between the chains play a role in the formation and stabilization of tertiary structure. Small proteins usually consist of only one domain but larger proteins may contain a number of domains connected by segments of polypeptide chain which lack regular secondary structure.
Microtubule-Associated Proteins
Cloning, Molecular
Actins
Filamentous proteins that are the main constituent of the thin filaments of muscle fibers. The filaments (known also as filamentous or F-actin) can be dissociated into their globular subunits; each subunit is composed of a single polypeptide 375 amino acids long. This is known as globular or G-actin. In conjunction with MYOSINS, actin is responsible for the contraction and relaxation of muscle.
Cattle
Thermoplasma
Enzyme Stability
Mitochondria
Semiautonomous, self-reproducing organelles that occur in the cytoplasm of all cells of most, but not all, eukaryotes. Each mitochondrion is surrounded by a double limiting membrane. The inner membrane is highly invaginated, and its projections are called cristae. Mitochondria are the sites of the reactions of oxidative phosphorylation, which result in the formation of ATP. They contain distinctive RIBOSOMES, transfer RNAs (RNA, TRANSFER); AMINO ACYL T RNA SYNTHETASES; and elongation and termination factors. Mitochondria depend upon genes within the nucleus of the cells in which they reside for many essential messenger RNAs (RNA, MESSENGER). Mitochondria are believed to have arisen from aerobic bacteria that established a symbiotic relationship with primitive protoeukaryotes. (King & Stansfield, A Dictionary of Genetics, 4th ed)
HSP70 Heat-Shock Proteins
Microscopy, Electron
Microscopy using an electron beam, instead of light, to visualize the sample, thereby allowing much greater magnification. The interactions of ELECTRONS with specimens are used to provide information about the fine structure of that specimen. In TRANSMISSION ELECTRON MICROSCOPY the reactions of the electrons that are transmitted through the specimen are imaged. In SCANNING ELECTRON MICROSCOPY an electron beam falls at a non-normal angle on the specimen and the image is derived from the reactions occurring above the plane of the specimen.
Isocitrate Dehydrogenase
An enzyme of the oxidoreductase class that catalyzes the conversion of isocitrate and NAD+ to yield 2-ketoglutarate, carbon dioxide, and NADH. It occurs in cell mitochondria. The enzyme requires Mg2+, Mn2+; it is activated by ADP, citrate, and Ca2+, and inhibited by NADH, NADPH, and ATP. The reaction is the key rate-limiting step of the citric acid (tricarboxylic) cycle. (From Dorland, 27th ed) (The NADP+ enzyme is EC 1.1.1.42.) EC 1.1.1.41.
Cytosol
Tetrahydrofolate Dehydrogenase
An enzyme of the oxidoreductase class that catalyzes the reaction 7,8-dihyrofolate and NADPH to yield 5,6,7,8-tetrahydrofolate and NADPH+, producing reduced folate for amino acid metabolism, purine ring synthesis, and the formation of deoxythymidine monophosphate. Methotrexate and other folic acid antagonists used as chemotherapeutic drugs act by inhibiting this enzyme. (Dorland, 27th ed) EC 1.5.1.3.
Allosteric Regulation
Binding Sites
Chloroplasts
Plant cell inclusion bodies that contain the photosynthetic pigment CHLOROPHYLL, which is associated with the membrane of THYLAKOIDS. Chloroplasts occur in cells of leaves and young stems of plants. They are also found in some forms of PHYTOPLANKTON such as HAPTOPHYTA; DINOFLAGELLATES; DIATOMS; and CRYPTOPHYTA.
Desulfurococcaceae
A family of archaea, in the order DESULFUROCOCCALES, consisting of anaerobic cocci which utilize peptides, proteins or carbohydrates facultatively by sulfur respiration or fermentation. There are eight genera: AEROPYRUM, Desulfurococcus, Ignicoccus, Staphylothermus, Stetteria, Sulfophoboccus, Thermodiscus, and Thermosphaera. (From Bergey's Manual of Systematic Bacteriology, 2d ed)
Protein Structure, Secondary
GroES in the asymmetric GroEL14-GroES7 complex exchanges via an associative mechanism. (1/481)
The interaction of the chaperonin GroEL14 with its cochaperonin GroES7 is dynamic, involving stable, asymmetric 1:1 complexes (GroES7.GroEL7-GroEL7) and transient, metastable symmetric 2:1 complexes [GroES7.GroEL7-GroEL7.GroES7]. The transient formation of a 2:1 complex permits exchange of free GroES7 for GroES7 bound in the stable 1:1 complex. Electrophoresis in the presence of ADP was used to resolve free GroEL14 from the GroES7-GroEL14 complex. Titration of GroEL14 with radiolabeled GroES7 to molar ratios of 32:1 demonstrated a 1:1 limiting stoichiometry in a stable complex. No stable 2:1 complex was detected. Preincubation of the asymmetric GroES7.GroEL7-GroEL7 complex with excess unlabeled GroES7 in the presence of ADP demonstrated GroES7 exchange. The rates of GroES7 exchange were proportional to the concentration of unlabeled free GroES7. This concentration dependence points to an associative mechanism in which exchange of GroES7 occurs by way of a transient 2:1 complex and excludes a dissociative mechanism in which exchange occurs by way of free GroEL14. Exchange of radiolabeled ADP from 1:1 complexes was much slower than the exchange of GroES7. In agreement with recent structural studies, this indicates that conformational changes in GroEL14 following the dissociation of GroES7 must precede ADP release. These results explain how the GroEL14 cavity can become reversibly accessible to proteins under in vivo conditions that favor 2:1 complexes. (+info)The role of DnaK/DnaJ and GroEL/GroES systems in the removal of endogenous proteins aggregated by heat-shock from Escherichia coli cells. (2/481)
The submission of Escherichia coli cells to heat-shock (45 degrees C, 15 min) caused the intracellular aggregation of endogenous proteins. In the wt cells the aggregates (the S fraction) disappeared 10 min after transfer to 37 degrees C. In contrast, the S fraction in the dnaK and dnaJ mutant strains was stable during approximately one generation time (45 min). This demonstrated that neither the renaturation nor the degradation of the denatured proteins was possible in the absence of DnaK and DnaJ. The groEL44 and groES619 mutations stabilised the aggregates to a lesser extent. It was shown by the use of cloned genes, dnaK/dnaJ or groEL/groES, producing the corresponding proteins in about 4-fold excess, that the appearance of the S fraction in the wt strain resulted from a transiently insufficient supply of the heat-shock proteins. Overproduction of the GroEL/GroES proteins in dnaK756 or dnaJ259 background prevented the aggregation, however, overproduction of the DnaK/DnaJ proteins did not prevent the aggregation in the groEL44 or groES619 mutant cells although it accelerated the disappearance of the aggregates. The properties of the aggregated proteins are discussed from the point of view of their competence to renaturation/degradation by the heat-shock system. (+info)GroEL/GroES-dependent reconstitution of alpha2 beta2 tetramers of humanmitochondrial branched chain alpha-ketoacid decarboxylase. Obligatory interaction of chaperonins with an alpha beta dimeric intermediate. (3/481)
The decarboxylase component (E1) of the human mitochondrial branched chain alpha-ketoacid dehydrogenase multienzyme complex (approximately 4-5 x 10(3) kDa) is a thiamine pyrophosphate-dependent enzyme, comprising two 45.5-kDa alpha subunits and two 37.8-kDa beta subunits. In the present study, His6-tagged E1 alpha2 beta2 tetramers (171 kDa) denatured in 8 M urea were competently reconstituted in vitro at 23 degrees C with an absolute requirement for chaperonins GroEL/GroES and Mg-ATP. Unexpectedly, the kinetics for the recovery of E1 activity was very slow with a rate constant of 290 M-1 s-1. Renaturation of E1 with a similarly slow kinetics was also achieved using individual GroEL-alpha and GroEL-beta complexes as combined substrates. However, the beta subunit was markedly more prone to misfolding than the alpha in the absence of GroEL. The alpha subunit was released as soluble monomers from the GroEL-alpha complex alone in the presence of GroES and Mg-ATP. In contrast, the beta subunit discharged from the GroEL-beta complex readily rebound to GroEL when the alpha subunit was absent. Analysis of the assembly state showed that the His6-alpha and beta subunits released from corresponding GroEL-polypeptide complexes assembled into a highly structured but inactive 85.5-kDa alpha beta dimeric intermediate, which subsequently dimerized to produce the active alpha2 beta2 tetrameter. The purified alpha beta dimer isolated from Escherichia coli lysates was capable of binding to GroEL to produce a stable GroEL-alpha beta ternary complex. Incubation of this novel ternary complex with GroES and Mg-ATP resulted in recovery of E1 activity, which also followed slow kinetics with a rate constant of 138 M-1 s-1. Dimers were regenerated from the GroEL-alpha beta complex, but they needed to interact with GroEL/GroES again, thereby perpetuating the cycle until the conversion from dimers to tetramers was complete. Our study describes an obligatory role of chaperonins in priming the dimeric intermediate for subsequent tetrameric assembly, which is a slow step in the reconstitution of E1 alpha2 beta2 tetramers. (+info)Mechanisms for GroEL/GroES-mediated folding of a large 86-kDa fusion polypeptide in vitro. (4/481)
Our understanding of mechanisms for GroEL/GroES-assisted protein folding to date has been derived mostly from studies with small proteins. Little is known concerning the interaction of these chaperonins with large multidomain polypeptides during folding. In the present study, we investigated chaperonin-dependent folding of a large 86-kDa fusion polypeptide, in which the mature maltose-binding protein (MBP) sequence was linked to the N terminus of the alpha subunit of the decarboxylase (E1) component of the human mitochondrial branched-chain alpha-ketoacid dehydrogenase complex. The fusion polypeptide, MBP-alpha, when co-expressed with the beta subunit of E1, produced a chimeric protein MBP-E1 with an (MBP-alpha)2beta2 structure, similar to the alpha2 beta2 structure in native E1. Reactivation of MBP-E1 denatured in 8 M urea was absolutely dependent on GroEL/GroES and Mg2+-ATP, and exhibited strikingly slow kinetics with a rate constant of 376 M-1 s-1, analogous to denatured untagged E1. Chaperonin-mediated refolding of the MBP-alpha fusion polypeptide showed that the folding of the MBP moiety was about 7-fold faster than that of the alpha moiety on the same chain with rate constants of 1.9 x 10(-3) s-1 and 2.95 x 10(-4) s-1, respectively. This explained the occurrence of an MBP-alpha. GroEL binary complex that was isolated with amylose resin from the refolding mixture and transformed Escherichia coli lysates. The data support the thesis that distinct functional sequences in a large polypeptide exhibit different folding characteristics on the same GroEL scaffold. Moreover, we show that when the alpha.GroEL complex (molar ratio 1:1) was incubated with GroES, the latter was capable of capping either the very ring that harbored the 48-kDa (His)6-alpha polypeptide (in cis) or the opposite unoccupied cavity (in trans). In contrast, the MBP-alpha.GroEL (1:1) complex was capped by GroES exclusively in the trans configuration. These findings suggest that the productive folding of a large multidomain polypeptide can only occur in the GroEL cavity that is not sequestered by GroES. (+info)Presence of a pre-apoptotic complex of pro-caspase-3, Hsp60 and Hsp10 in the mitochondrial fraction of jurkat cells. (5/481)
Activation of pro-caspase-3 is a central event in the execution phase of apoptosis and appears to serve as the convergence point of different apoptotic signaling pathways. Recently, mitochondria were found to play a central role in apoptosis through release of cytochrome c and activation of caspases. Moreover, a sub-population of pro-caspase-3 has been found to be localized to this organelle. In the present study, we demonstrate that pro-caspase-3 is present in the mitochondrial fraction of Jurkat T cells in a complex with the chaperone proteins Hsp60 and Hsp10. Induction of apoptosis with staurosporine led to the activation of mitochondrial pro-caspase-3 and its dissociation from the Hsps which were released from mitochondria. The release of Hsps occurred simultaneously with the release of other mitochondrial intermembrane space proteins including cytochrome c and adenylate kinase, prior to a loss of mitochondrial transmembrane potential. In in vitro systems, recombinant Hsp60 and Hsp10 accelerated the activation of pro-caspase-3 by cytochrome c and dATP in an ATP-dependent manner, consistent with their function as chaperones. This finding suggests that the release of mitochondrial Hsps may also accelerate caspase activation in the cytoplasm of intact cells. (+info)Chaperonin function: folding by forced unfolding. (6/481)
The ability of the GroEL chaperonin to unfold a protein trapped in a misfolded condition was detected and studied by hydrogen exchange. The GroEL-induced unfolding of its substrate protein is only partial, requires the complete chaperonin system, and is accomplished within the 13 seconds required for a single system turnover. The binding of nucleoside triphosphate provides the energy for a single unfolding event; multiple turnovers require adenosine triphosphate hydrolysis. The substrate protein is released on each turnover even if it has not yet refolded to the native state. These results suggest that GroEL helps partly folded but blocked proteins to fold by causing them first to partially unfold. The structure of GroEL seems well suited to generate the nonspecific mechanical stretching force required for forceful protein unfolding. (+info)GroEL-GroES cycling: ATP and nonnative polypeptide direct alternation of folding-active rings. (7/481)
The double-ring chaperonin GroEL mediates protein folding in the central cavity of a ring bound by ATP and GroES, but it is unclear how GroEL cycles from one folding-active complex to the next. We observe that hydrolysis of ATP within the cis ring must occur before either nonnative polypeptide or GroES can bind to the trans ring, and this is associated with reorientation of the trans ring apical domains. Subsequently, formation of a new cis-ternary complex proceeds on the open trans ring with polypeptide binding first, which stimulates the ATP-dependent dissociation of the cis complex (by 20- to 50-fold), followed by GroES binding. These results indicate that, in the presence of nonnative protein, GroEL alternates its rings as folding-active cis complexes, expending only one round of seven ATPs per folding cycle. (+info)Previously undetected Chlamydia trachomatis infection, immunity to heat shock proteins and tubal occlusion in women undergoing in-vitro fertilization. (8/481)
The relationship between a previously undetected Chlamydia trachomatis infection, tubal infertility, immunity to heat shock proteins and subsequent in-vitro fertilization (IVF) outcome was evaluated. Women with tubal occlusion, with or without hydrosalpinges, and no history of C. trachomatis infection were tested for circulating antibodies to the human 60-kDa heat shock protein (Hhsp60), the C. trachomatis 10-kDa heat shock protein (Chsp10) and C. trachomatis surface antigens prior to their initial IVF cycle. Sera were obtained from 50 women whose male partners were infertile, 58 women with tubal occlusion but no hydrosalpinx and 39 women with tubal occlusions plus hydrosalpinx. Clinical pregnancies were documented in 68% of the women with male factor infertility. This was higher than the 43.1% rate in women with tubal occlusions (P = 0.04) and the 41% rate in women with hydrosalpinx (P = 0.02). C. trachomatis antibodies were present in one (2%) women with male factor infertility as opposed to 15 (25.9%) women with tubal occlusion (P = 0.003) and 13 (33%) with hydrosalpinx (P < 0.0001). Antibodies to Chsp10 were more prevalent in women with hydrosalpinx (46.8%) than in women with male factor infertility (P < 0.0001, 6%) or tubal occlusion (P = 0.0009, 15.5%). Hhsp60 antibodies were equally more prevalent in women with tubal occlusion plus (46.8%) or minus hydrosalpinx (41.4%) than in women with male factor infertility (P < 0.0002). Hhsp60 was more prevalent in those women positive for Chsp10 (P = 0.02) or C. trachomatis (P = 0.04) antibodies than in women lacking these antibodies. There was no relationship between any of the antibodies measured in sera and IVF outcome. (+info)
GroES
The homolog in E. coli is GroES that is a chaperonin which usually works in conjunction with GroEL. GroES exists as a ring- ... Of these, six were lost within ten days of ovulation (43% rate of early conceptus loss). Use of EPF has been proposed to ... "Entrez Gene: HSPE1 heat shock 10kDa protein 1 (chaperonin 10)". Hemmingsen SM, Woolford C, van der Vies SM, Tilly K, Dennis DT ... Lee KH, Kim HS, Jeong HS, Lee YS (October 2002). "Chaperonin GroESL mediates the protein folding of human liver mitochondrial ...
Non-chaperonin molecular chaperone ATPase
... (EC 3.6.4.10, molecular chaperone Hsc70 ATPase) is an enzyme with systematic name ATP ... Non-chaperonin+molecular+chaperone+ATPase at the US National Library of Medicine Medical Subject Headings (MeSH) Portal: ... phosphate These enzymes perform many functions that are similar to those of chaperonins. Chaperone (protein) Sadis S, Hightower ...
BBS10
2007). "Identification of a novel BBS gene (BBS12) highlights the major role of a vertebrate-specific branch of chaperonin- ... "BBS10 encodes a vertebrate-specific chaperonin-like protein and is a major BBS locus". Nat. Genet. 38 (5): 521-4. doi:10.1038/ ... Bardet-Biedl syndrome 10, also known as BBS10 is a human gene. The Bardet-Biedl syndrome 10 protein has distant sequence ... homology to type II chaperonins. As a molecular chaperone, this protein may affect the folding or stability of other ciliary or ...
GroEL
Binding of GroES to the open cavity of the chaperonin induces the individual subunits of the chaperonin to rotate such that the ... Alternate Names: 60 kDa chaperonin, Chaperonin 60, CPN60, Heat shock protein 60, HSP-60, HuCHA60, Mitochondrial matrix protein ... this is not the case with chaperonins". It has been found that many anti-chaperonin antibodies exist and are associated with ... "generated by a human host after exposure to bacterial chaperonin 60 proteins" can cross-react with human chaperonin 60 proteins ...
TRiC (complex)
4 Chaperone Chaperonin Heat shock protein The term "TCP-1" is variously expanded as "T-complex protein 1" and "tailless complex ... T-complex protein Ring Complex (TRiC), otherwise known as Chaperonin Containing TCP-1 (CCT), is a multiprotein complex and the ... Willison, KR (5 October 2018). "The structure and evolution of eukaryotic chaperonin-containing TCP-1 and its mechanism that ... "Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM". Nature ...
Prefoldin
... bonds specifically to cytosolic chaperonin protein. This complex of prefoldin and chaperonin then forms molecules of ... due to its high affinity for the chaperonin molecule. Once the prefoldin is in contact with the chaperonin protein, it loses ... For example, the prefoldin that is used in the formation of actin also transfers α or β tubulin to a cytosolic chaperonin. The ... A prefoldin molecule works as a transfer protein in conjunction with a molecule of chaperonin to form a chaperone complex and ...
Archaea
Trent JD, Kagawa HK, Yaoi T, Olle E, Zaluzec NJ (May 1997). "Chaperonin filaments: the archaeal cytoskeleton?". Proceedings of ... making up about one in ten of all the prokaryotes in the human gut. In termites and in humans, these methanogens may in fact be ... 10 (7): 1696-705. doi:10.1038/ismej.2015.233. PMC 4918440. PMID 26824177. MacLeod F, Kindler GS, Wong HL, Chen R, Burns BP ( ... Retrieved 10 January 2006. Dalrymple GB (2001). "The age of the Earth in the twentieth century: a problem (mostly) solved". ...
Beta-propeller
June 2019). "Structural and functional analysis of the role of the chaperonin CCT in mTOR complex assembly". Nature ... 36 (10): 553-61. doi:10.1016/j.tibs.2011.07.004. PMID 21924917. Stein KC, Kriel A, Frydman J (July 2019). "Nascent Polypeptide ... 10 (1): 2865. Bibcode:2019NatCo..10.2865C. doi:10.1038/s41467-019-10781-1. PMC 6599039. PMID 31253771. Ludlam, WG; Aoba, T; ... 8 (10): e77074. Bibcode:2013PLoSO...877074K. doi:10.1371/journal.pone.0077074. PMC 3797127. PMID 24143202. Branden C, Tooze J ...
TBCA
This gene encodes chaperonin cofactor A. GRCh38: Ensembl release 89: ENSG00000171530 - Ensembl, May 2017 GRCm38: Ensembl ... "Entrez Gene: TBCA tubulin folding cofactor A". Lewis SA, Tian G, Vainberg IE, Cowan NJ (1996). "Chaperonin-mediated folding of ... 10 (10): 1546-60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152. Guasch A, Aloria K, Pérez R, et al. (2002). "Three- ...
Takuzo Aida
"Chaperonin-mediated stabilization and ATP-triggered release of semiconductor nanoparticles". Nature. 423 (6940): 628-632. ... ATP-responsive nanotubular carriers composed of chaperonin proteins, a biomolecular machine (4) non-crosslinked photoactuators ... Retrieved 2022-10-04. "Takuzo Aida". Royal Netherlands Academy of Arts and Sciences. Archived from the original on 2 May 2020 ... Retrieved 2022-10-04. Aida Research Group RIKEN Center for Emergent Matter Science Emergent Soft Matter Function Research Group ...
Knotted protein
"Knot formation in newly translated proteins is spontaneous and accelerated by chaperonins". Nat Chem Biol. 8 (2): 147-153. doi: ... "The exclusive effects of chaperonin on the behavior of proteins with 52 knot". PLOS Computational Biology. 14 (3): e1005970. ... Dabrowski-Tumanski, Pawel; Piejko, Maciej; Niewieczerzal, Szymon; Stasiak, Andrzej; Sulkowska, Joanna I. (2018-10-12). "Protein ... 2016-10-28). "LinkProt: a database collecting information about biological links". Nucleic Acids Research. 45 (D1): D243-D249. ...
CCT7
"Entrez Gene: CCT7 chaperonin containing TCP1, subunit 7 (eta)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, Goudreault M ... Hynes G, Celis JE, Lewis VA, Carne A, U S, Lauridsen JB, Willison KR (Nov 1996). "Analysis of chaperonin-containing TCP-1 ... Yokota S, Yanagi H, Yura T, Kubota H (Sep 2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content ... chaperonin containing TCP1) from the subunit composition of CCT micro-complexes". The EMBO Journal. 16 (14): 4311-6. doi: ...
Dihydrofolate reductase
"Protein folding in the central cavity of the GroEL-GroES chaperonin complex". Nature. 379 (6564): 420-6. Bibcode:1996Natur.379 ... "Protein folding in the central cavity of the GroEL-GroES chaperonin complex". Nature. 379 (6564): 420-6. Bibcode:1996Natur.379 ... 50 (10): 3435-43. doi:10.1128/AAC.00386-06. PMC 1610094. PMID 17005826. Chan DC, Fu H, Forsch RA, Queener SF, Rosowsky A (June ... 4 (10): 2010-6. doi:10.1128/mcb.4.10.2010. PMC 369017. PMID 6504041. Smith SL, Patrick P, Stone D, Phillips AW, Burchall JJ ( ...
Capsid
Like GroES, gp31 forms a stable complex with GroEL chaperonin that is absolutely necessary for the folding and assembly in vivo ... 103 (10): 3669-74. Bibcode:2006PNAS..103.3669F. doi:10.1073/pnas.0510333103. PMC 1450140. PMID 16505372. Khayat R, Tang L, ... 10 (5): e0126094. Bibcode:2015PLoSO..1026094J. doi:10.1371/journal.pone.0126094. PMC 4425637. PMID 25955384. Williams R (1 June ... The cylinder is composed of 10 elongated triangular faces. The Q number (or Tmid), which can be any positive integer, specifies ...
Phosducin-like
2002). "Regulatory interaction of phosducin-like protein with the cytosolic chaperonin complex". Proc. Natl. Acad. Sci. U.S.A. ... 10 (11): 1788-95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863. Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward ... of G protein betagamma subunits by protein kinase CK2-phosphorylated phosducin-like protein and the cytosolic chaperonin ...
Prefoldin subunit 3
It is also involved in transporting nascent polypeptides to cytosolic chaperonins for post-translational folding. VBP-1 is a ... "NiceProt report: P61758 (Prefoldin 3, human)". 2007-07-10. Retrieved 2007-07-17. Brinke A, Green PM, Giannelli F (1997). " ...
CCT5 (gene)
"Entrez Gene: CCT5 chaperonin containing TCP1, subunit 5 (epsilon)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, ... Yokota S, Yanagi H, Yura T, Kubota H (Sep 2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content ... Roobol A, Holmes FE, Hayes NV, Baines AJ, Carden MJ (Apr 1995). "Cytoplasmic chaperonin complexes enter neurites developing in ... Liou AK, Willison KR (Jul 1997). "Elucidation of the subunit orientation in CCT (chaperonin containing TCP1) from the subunit ...
CCT2 (gene)
"Entrez Gene: CCT2 chaperonin containing TCP1, subunit 2 (beta)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, Goudreault ... Yokota S, Yanagi H, Yura T, Kubota H (Sep 2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content ... Hynes GM, Willison KR (Jun 2000). "Individual subunits of the eukaryotic cytosolic chaperonin mediate interactions with binding ... "3D reconstruction of the ATP-bound form of CCT reveals the asymmetric folding conformation of a type II chaperonin". Nature ...
Heat shock response
Once a cap binds to the chaperonin, the protein is free within the barrel to undergo hydrophobic collapse and reach a stable ... Chaperones include the HSP70s and HSP90s while HSP60s are considered to be chaperonins. The HSP70 chaperone family is the main ... Todd MJ, Lorimer GH, Thirumalai D (April 1996). "Chaperonin-facilitated protein folding: optimization of rate and yield by an ... Kmiecik S, Kolinski A (July 2011). "Simulation of chaperonin effect on protein folding: a shift from nucleation-condensation to ...
MKKS
McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin is a protein that in humans is encoded by the MKKS gene. This gene ... 2005). "MKKS/BBS6, a divergent chaperonin-like protein linked to the obesity disorder Bardet-Biedl syndrome, is a novel ... 2000). "Mutation of a gene encoding a putative chaperonin causes McKusick-Kaufman syndrome". Nat. Genet. 25 (1): 79-82. doi: ... 10 (11): 1788-95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863. Beales PL, Katsanis N, Lewis RA, et al. (2001). "Genetic ...
Hsp90
Xu Z, Horwich AL, Sigler PB (August 1997). "The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex". ... 5 (10): 761-72. doi:10.1038/nrc1716. PMID 16175177. S2CID 22098282. Kim YS, Alarcon SV, Lee S, Lee MJ, Giaccone G, Neckers L, ... 10 (6): 1307-18. doi:10.1016/S1097-2765(02)00785-2. PMID 12504007. Marcu MG, Chadli A, Bouhouche I, Catelli M, Neckers LM ( ... 59 (10): 1640-8. doi:10.1007/PL00012491. PMID 12475174. S2CID 34094587. Imai J, Maruya M, Yashiroda H, Yahara I, Tanaka K (July ...
Structural gene
"Genomic structure of the human mitochondrial chaperonin genes: HSP60 and HSP10 are localised head to head on chromosome 2 ... 5 (10): R74. doi:10.1186/gb-2004-5-10-r74. ISSN 1474-760X. PMC 545594. PMID 15461793. Makałowski, W. (2001-01-01). "The human ... 57 (10): 2259-2261. doi:10.1099/ijs.0.64915-0. PMID 17911292. Hebert, Paul D. N.; Cywinska, Alina; Ball, Shelley L.; deWaard, ... 107 (10): 2417-2424. doi:10.1002/cncr.22265. ISSN 0008-543X. PMID 17048249. Son, Dong Ju; Kumar, Sandeep; Takabe, Wakako; Kim, ...
CCT4
"Entrez Gene: CCT4 chaperonin containing TCP1, subunit 4 (delta)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, Goudreault ... Melki R, Batelier G, Soulié S, Williams RC (May 1997). "Cytoplasmic chaperonin containing TCP-1: structural and functional ... "Eukaryotic type II chaperonin CCT interacts with actin through specific subunits". Nature. 402 (6762): 693-6. Bibcode:1999Natur ... "Analysis of the interaction between the eukaryotic chaperonin CCT and its substrates actin and tubulin". Journal of Structural ...
Major sperm protein
Despite only 11% of sequence similarity, MSP and the N-terminus of the bacterial P-pilus associated chaperonin PapD share a ... 18 (10): 705-14. doi:10.1016/j.cub.2008.04.043. PMC 2613949. PMID 18472420. Kuwabara PE (January 2003). "The multifaceted C. ... It increases the contraction rate from 10-13 to around 19 contractions per minute. The importance of these contractions is ...
Wah Chiu
"Mechanism of folding chamber closure in a group II chaperonin". Nature. 463 (7279): 379-383. Bibcode:2010Natur.463..379Z. doi: ... Retrieved 2018-10-07. v t e (CS1 maint: uses authors parameter, Articles with short description, Short description is different ... new cryo-EM techniques allowing much higher-resolution structures of large molecular complexes such as viruses and chaperonin. ... Retrieved 2018-10-07. "Helsingin yliopisto - filosofisen tiedekunnan promootio 2014". www.helsinki.fi. ...
Protist locomotion
... chaperonins, and HSP70 heat shock proteins, and also undergo other heat shock responses to cope with heat stress. In response ... 10 (19): 3831-3851. doi:10.1002/smll.201400384. PMID 24895215. Nguyen, Van Du; Han, Ji-Won; Choi, Young Jin; Cho, Sunghoon; ... Although C. moewusii cells are reported to migrate toward warmer temperatures in a 10 °C to 15 °C gradient, there has been no ... 17 (10): 1705-1724. doi:10.1039/C7LC00064B. PMID 28480466. Li, Jinxing; Esteban-Fernández De Ávila, Berta; Gao, Wei; Zhang, ...
PACRG
... and chaperonin components. This protein is also a component of Lewy bodies in Parkinson's disease patients, and it suppresses ... 18 (6): 404-10. doi:10.1016/j.smim.2006.07.005. PMID 16973374. Venter JC, Adams MD, Myers EW, et al. (2001). "The sequence of ... 278 (51): 51901-10. doi:10.1074/jbc.M309655200. PMID 14532270. Mungall AJ, Palmer SA, Sims SK, et al. (2003). "The DNA sequence ...
CCT6A
"Entrez Gene: CCT6A chaperonin containing TCP1, subunit 6A (zeta 1)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, ... Segel GB, Boal TR, Cardillo TS, Murant FG, Lichtman MA, Sherman F (August 1992). "Isolation of a gene encoding a chaperonin- ... Yokota S, Yanagi H, Yura T, Kubota H (2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content of a ... a subunit of the eukaryotic TRiC chaperonin from humans and yeast". J Biol Chem. 269 (28): 18616-22. doi:10.1016/S0021-9258(17) ...
PFDN2
1998). "Prefoldin, a chaperone that delivers unfolded proteins to cytosolic chaperonin". Cell. 93 (5): 863-73. doi:10.1016/ ... 10 (10): 1546-60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152. Strausberg RL, Feingold EA, Grouse LH, et al. (2003). " ...
CCT3
"Entrez Gene: CCT3 chaperonin containing TCP1, subunit 3 (gamma)". Chen GI, Tisayakorn S, Jorgensen C, D'Ambrosio LM, Goudreault ... which encodes the chaperonin subunit CCT gamma". The Biochemical Journal. 313 (Pt 2): 381-9. doi:10.1042/bj3130381. PMC 1216920 ... "Formation of the VHL-elongin BC tumor suppressor complex is mediated by the chaperonin TRiC". Molecular Cell. 4 (6): 1051-61. ... "Identification of six Tcp-1-related genes encoding divergent subunits of the TCP-1-containing chaperonin". Current Biology. 4 ( ...
Yale School of Medicine
... uncovered the action of chaperonins in his study of protein folding Marcella Nunez-Smith: Co-chair of the Biden-Harris ... 10″N 72°56′10″W / 41.3027°N 72.936°W / 41.3027; -72.936 (All articles with dead external links, Articles with dead external ...
Alpert Medical School
Notable alumni include Arthur L. Horwich (BA 1972, MD 1975), discoverer of the role of chaperonins in protein folding; Lloyd B ... "10 Medical Schools With the Lowest Acceptance Rates - U.S. News & World Report". Usnews.com. 2017-03-16. Archived from the ... Retrieved 2021-10-14. Greene, Brigitta (2009-11-02). "Downtown, big ideas are soon to be tested". Brown Daily Herald. Retrieved ... Retrieved 2021-10-04. "Other Programs". Archived from the original on 2011-10-04. Retrieved June 19, 2017. "Health Warrior". ...
George Huntly Lorimer
Lorimer is recognized for his work on mechanism of two proteins, RuBisCO and the GroE chaperonins. Rubisco is the enzyme ... In 1989, using an unequivocally unfolded protein and the purified chaperonin proteins GroEL and GroES, his group was the first ... Archived from the original on 2016-04-10. One or more of the preceding sentences incorporates text from the royalsociety.org ... responsible for photosynthetic carbon fixation, and the GroE chaperonins enable the Adenosine triphosphate (ATP)-dependent ...
G beta-gamma complex
Wells CA, Dingus J, Hildebrandt JD (July 2006). "Role of the chaperonin CCT/TRiC complex in G protein betagamma-dimer assembly ... Folding of the β-subunit is thought to be aided by the chaperone CCT (chaperonin containing tailless-complex polypeptide 1), ... of G protein betagamma subunits by protein kinase CK2-phosphorylated phosducin-like protein and the cytosolic chaperonin ... Saroz, Yurii; Kho, Dan T.; Glass, Michelle; Graham, Euan Scott; Grimsey, Natasha Lillia (2019-10-19). "Cannabinoid Receptor 2 ( ...
G. Marius Clore
... and directly demonstrated that the apo state of the chaperonin GroEL possesses intrinsic foldase/unfoldase activities." Clore ... "Intrinsic unfoldase/foldase activity of the chaperonin GroEL directly demonstrated using multinuclear relaxation-based NMR". ... 38 (10): 515-530. doi:10.1016/j.tibs.2013.08.003. PMC 3831880. PMID 24055245.{{cite journal}}: CS1 maint: uses authors ... 57 (10): 2687-2691. doi:10.1002/anie.201713172. PMC 6034507. PMID 29345807.{{cite journal}}: CS1 maint: uses authors parameter ...
Hereditary spastic paraplegia
Ten genes have been identified with autosomal dominant inheritance. One of these, SPG4, accounts for ~50% of all genetically ... The impaired chaperonin 60 activity leads to impaired mitochondrial quality control. Two genes DDHD1 and CYP2U1 have shown ... Two mitochondrial resident proteins are mutated in HSP: paraplegin and chaperonin 60. Paraplegin is a m-AAA metalloprotease of ... 44 (10): 871-883. doi:10.1136/jnnp.44.10.871. PMC 491171. PMID 7310405. Depienne C, Stevanin G, Brice A, Durr A (2007). " ...
Macromolecular cages
Other examples of protein cages are clathrin cages, viral envelopes, chaperonins, and the iron storage protein ferritin. There ... 10 (2): 440-446. doi:10.1039/C8SC04006K. PMC 6335864. PMID 30746091. Lee, Taeheon; Oh, Joongsuk; Jeong, Jonghwa; Jung, Haeji; ... 49 (10): 3672-3680. Bibcode:2016MaMol..49.3672L. doi:10.1021/acs.macromol.6b00093. ISSN 0024-9297. Bolskar, Robert D. (2016). " ... Ke, Yonggang; Sharma, Jaswinder; Liu, Minghui; Jahn, Kasper; Liu, Yan; Yan, Hao (2009-06-10). "Scaffolded DNA Origami of a DNA ...
CCT8
"Entrez Gene: CCT8 chaperonin containing TCP1, subunit 8 (theta)". Human CCT8 genome location and CCT8 gene details page in the ... Kubota H, Hynes G, Willison K (Apr 1995). "The eighth Cct gene, Cctq, encoding the theta subunit of the cytosolic chaperonin ... Yokota S, Yanagi H, Yura T, Kubota H (2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content of a ... Hynes GM, Willison KR (2000). "Individual subunits of the eukaryotic cytosolic chaperonin mediate interactions with binding ...
TUBA1B
Yokota S, Yanagi H, Yura T, Kubota H (2001). "Cytosolic chaperonin-containing t-complex polypeptide 1 changes the content of a ... 3 (10): 1738-45. doi:10.1128/mcb.3.10.1738. PMC 370035. PMID 6646120. "Entrez Gene: TUBA1B tubulin, alpha 1b". Kapeller, R; ...
Supramolecular polymer
... metal ion-induced 1D assembly of a molecularly engineered chaperonin". Journal of the American Chemical Society. 131 (22): 7556 ... 10 (1): 3976. Bibcode:2019NatCo..10.3976S. doi:10.1038/s41467-019-11840-3. PMC 6726595. PMID 31484928. Adelizzi B, Van Zee NJ, ... 10 (1): 450. Bibcode:2019NatCo..10..450J. doi:10.1038/s41467-019-08308-9. PMC 6347607. PMID 30683874. Venkata Rao K, Miyajima D ... 2007-10-05). "Counterion-dependent proton-driven self-assembly of linear supramolecular oligomers based on amino-calix[5]arene ...
Streptococcus iniae
1998). "Streptococcus iniae, a human and animal pathogen: specific identification by the chaperonin 60 gene identification ... 64 (10): 4065-67. doi:10.1128/AEM.64.10.4065-4067.1998. PMC 106603. PMID 9758844. Kawamura Y, Hou XG, Sultana F, Miura H, Ezaki ... 10 (9): 1694-96. doi:10.3201/eid1009.040029. PMC 3320292. PMID 15503411. Brunt J, Austin B (2005). "Use of a probiotic to ...
PAS domain
It mediates interactions with chaperonins and other small molecules like dioxin, but PAS B domains in NPAS2, a homolog of the ... 17 (10): 1282-1294. doi:10.1016/j.str.2009.08.011. PMC 3092527. PMID 19836329. Hennig, Sven; Strauss, Holger M.; Vanselow, ... 17 (10): 1282-1294. doi:10.1016/j.str.2009.08.011. PMC 3092527. PMID 19836329. Rosato, Ezio; Tauber, Eran; Kyriacou, ... 17 (10): 1282-94. doi:10.1016/j.str.2009.08.011. PMC 3092527. PMID 19836329. McIntosh, Brian; Hogenesch, John; Bradfield, ...
Arthur L. Horwich
They and others found early on that a chaperonin-mediated folding reaction can be reconstituted in a test tube, and that has ... His research into protein folding uncovered the action of chaperonins, protein complexes that assist the folding of other ... Art Horwich Lab at Yale Interview with Arthur Horwich Chaperonin-Mediated Protein Folding Arthur Horwich Seminars: "Chaperone- ... Such assemblies, known as chaperonins, also exist in other cellular compartments and are essential components, mediating ...
Macromolecular assembly
... chaperonin complex GroEL-GroES, photosystem I, ATP synthase, ferritin. RNA-protein complexes: ribosome, spliceosome, vault, ... Retrieved 2019-10-09. Osborne AR, Rapoport TA, van den Berg B (2005). "Protein translocation by the Sec61/SecY channel". Annual ... 94-95: 1-10. doi:10.1016/j.pnmrs.2016.01.004. PMID 27247282. Nobel Prizes in Chemistry (2012), The Nobel Prize in Chemistry ... 1840 (10): 3067-72. doi:10.1016/j.bbagen.2014.07.015. PMC 4151567. PMID 25086255. Berg JM, Tymoczko J, Stryer L (2002). ...
Actin
CCT is a group II chaperonin, a large protein complex that assists in the folding of other proteins. CCT is formed of a double ... Within Arabidopsis thaliana, a model organism, there are ten types of actin, six profilins, and dozens of myosins. This ... After AMP-PNP is bound to CCT the substrates move within the chaperonin's cavity. It also seems that in the case of actin, the ... The actin is recognized, loaded, and delivered to the cytosolic chaperonin (CCT) in an open conformation by the inner end of ...
SGN Unigene - Show All Stored BLAST Hits - Sol Genomics Network
Co-chaperonin. Match: gi,22297730,ref,NP_680977.1,. score: 99.4. e-value: 3e-19. Identity: 48.96%. Span: 288bp (23.9%). Frame: ... Co-chaperonin. Match: gi,72382807,ref,YP_292162.1,. score: 97.8. e-value: 9e-19. Identity: 51.55%. Span: 288bp (23.9%). Frame: ... co-chaperonin. Match: gi,33865049,ref,NP_896608.1,. score: 97.8. e-value: 9e-19. Identity: 48.96%. Span: 288bp (23.9%). Frame: ... Co-chaperonin. Match: gi,85859565,ref,YP_461767.1,. score: 88.2. e-value: 7e-16. Identity: 41.94%. Span: 279bp (23.1%). Frame: ...
Medium-chain acyl-CoA dehydrogenase (MCAD) mutations identified by MS/MS-based prospective screening of newborns differ from...
... encoding the chaperonins GroEL and GroES (unshaded bars), or the control plasmid pCaP, which lacks the GroESL chaperonin genes ... respectively indicate whether the chaperonins GroEL and GroES were co-overexpressed. The culture temperature is indicated. MCAD ... Christen M, Bongers J, Mathis D, Jagannathan V, Quintana RG, Leeb T. Christen M, et al. Genes (Basel). 2022 Oct 13;13(10):1847 ... 1997). Lysed samples from cells overexpressing the mutant proteins were incubated for 10 min at the temperatures indicated, ...
Ki Summary
Publication Detail
Biomarkers Search
Chaperonin containing TCP1 as a marker for identification of circulating tumor cells in blood.. Cox A; Martini A; Ghozlan H; ... The cytosolic chaperonin CCT/TRiC and cancer cell proliferation.. Boudiaf-Benmammar C; Cresteil T; Melki R. PLoS One; 2013; 8(4 ... 2. Overexpression of chaperonin containing TCP1, subunit 3 predicts poor prognosis in hepatocellular carcinoma.. Cui X; Hu ZP; ... 5. Chaperonin Containing TCP-1 Protein Level in Breast Cancer Cells Predicts Therapeutic Application of a Cytotoxic Peptide. ...
Cct3 MGI Mouse Gene Detail - MGI:104708 - chaperonin containing Tcp1, subunit 3 (gamma)
MeSH Browser
Chaperonins [D12.776.580.216.210] * Group I Chaperonins [D12.776.580.216.210.590] * Chaperonin 10 [D12.776.580.216.210.590.500] ... A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... A chaperonin 10 heat-shock protein isolated from bacterial sources.. Terms. GroES Protein Preferred Term Term UI T056165. Date ...
The different axes of the mammalian mitochondrial unfolded protein response | BMC Biology | Full Text
The genes encoding mammalian chaperonin 60 and chaperonin 10 are linked head-to-head and share a bidirectional promoter. Gene. ... triggering the induction of the chaperonin promoter via c-Jun N-terminal kinase 2 [33, 34]. Chaperonin induction by OTCΔ is ... They described the gene locus of the nuclear-encoded, mitochondria-localized chaperonins HSPD1 and HSPE1 (also known as HSP60 ... Two families of chaperonin: physiology and mechanism. Annu Rev Cell Dev Biol. 2007;23:115-45. ...
Figure 1 - Carbapenem Resistance in Clonally Distinct Clinical Strains of Vibrio fluvialis Isolated from Diarrheal Samples -...
DeCS
A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... Chaperonin 10 Entry term(s). Heat Shock Protein 10 Heat Shock Proteins 10 Heat-Shock Protein 10 Heat-Shock Proteins 10 hsp10 ... 1995; CHAPERONIN 10 was indexed under HEAT-SHOCK PROTEINS 1989-1994; HEAT-SHOCK PROTEIN 10 was indexed under HEAT-SHOCK ...
MeSH Browser
Chaperonins [D12.776.580.216.210] * Group I Chaperonins [D12.776.580.216.210.590] * Chaperonin 10 [D12.776.580.216.210.590.500] ... A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. The ... A chaperonin 10 heat-shock protein isolated from bacterial sources.. Terms. GroES Protein Preferred Term Term UI T056165. Date ...
Search | VHL CLAP/WR-PAHO/WHO
GroEL Ring Separation and Exchange in the Chaperonin Reaction. Yan, Xiao; Shi, Qiaoyun; Bracher, Andreas; Milicic, Goran; Singh ... Chaperonin-Assisted Protein Folding: Relative Population of Asymmetric and Symmetric GroEL:GroES Complexes. Haldar, Shubhasis; ... Pathway of Actin Folding Directed by the Eukaryotic Chaperonin TRiC. Balchin, David; Milicic, Goran; Strauss, Mike; Hayer-Hartl ... Active cage mechanism of chaperonin-assisted protein folding demonstrated at single-molecule level. Gupta, Amit J; Haldar, ...
Confinement and Stabilization of Fyn SH3 Folding Intermediate Mimetics within the Cavity of the Chaperonin GroEL Demonstrated...
The interaction of two folding intermediate mimetics of the model protein substrate Fyn SH3 with the chaperonin GroEL, a ... Reaction Cycle of Chaperonin GroEL via Symmetric "Football" Intermediate. Taguchi H. Taguchi H. J Mol Biol. 2015 Sep 11;427(18 ... The interaction of two folding intermediate mimetics of the model protein substrate Fyn SH3 with the chaperonin GroEL, a ... Intrinsic unfoldase/foldase activity of the chaperonin GroEL directly demonstrated using multinuclear relaxation-based NMR. ...
Biomolecular changes that occur in the antennal gland of the giant freshwater prawn (Machrobrachium rosenbergii). - PDF...
Chaperonin 10. Scylla paramamosain. 7.00E-37. Unigene12955_MrAnG. Citrate synthase. Aedes aegypti. 0. Unigene39332_MrAnG. ... The top ten best docking solutions, i.e., the complexes with highest scores, were exported for presentation.. Results and ... 10 / 23. Multi-omics study on M. rosenbergii antennal gland. Table 2. Summary of proteins identified within water surrounding a ... 10.. Kruangkum T, Vanichviriyakit R, Chotwiwatthanakun C, Saetan J, Tinikul Y, Wanichanon C, Cummins SF, Hanna PJ, Sobhon P. ...
Pharos : Target List
chaperonin. 10 Select filter option. transferase. 10 Select filter option. ligase. 9 Select filter option. G-protein. 8 Select ... Chaperonin. 10 Select filter option. Ligase. 9 Select filter option. Protease. 8 Select filter option. Enzyme modulator. 6 ... 10 Select filter option. actin binding. 9 Select filter option. beta-tubulin binding. 9 Select filter option. RNA binding. 9 ... Post-chaperonin tubulin folding pathway. 22 Select filter option. Prefoldin mediated transfer of substrate to CCT/TriC. 22 ...
NDF-RT Code NDF-RT Name
A2 N0000178778 Group IA Phospholipases A2 N0000178713 Group IB Phospholipases A2 N0000180245 Group II Chaperonins N0000178816 ... Chalones N0000169131 Chaperonin 10 N0000169129 Chaperonin 60 N0000180246 Chaperonin Containing TCP-1 N0000169128 Chaperonins ... N0000169111 Green Fluorescent Proteins N0000004859 grepafloxacin N0000006848 Griseofulvin N0000180244 Group I Chaperonins ... 10,14-eicosatetraenoic Acid N0000170428 14-3-3 Proteins N0000171030 15-Hydroxy-11 alpha,9 alpha-(epoxymethano)prosta-5,13- ...
NDF-RT Code NDF-RT Name
Chalcogens N0000008050 Chalcone N0000011182 Chalcones N0000170301 Chalones N0000169131 Chaperonin 10 N0000169129 Chaperonin 60 ... N0000169128 Chaperonins N0000005865 Charcoal N0000171461 Charybdotoxin N0000000002 Chemical Ingredients N0000175081 Chemical ... 10,14-eicosatetraenoic Acid N0000170428 14-3-3 Proteins N0000171030 15-Hydroxy-11 alpha,9 alpha-(epoxymethano)prosta-5,13- ... 10-oxide N0000167869 7-Alkoxycoumarin O-Dealkylase N0000168572 8,11,14-Eicosatrienoic Acid N0000170820 8-Bromo Cyclic Adenosine ...
GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae<...
Xia, PF, Zhang, GC, Liu, JJ, Kwak, S, Tsai, CS, Kong, II, Sung, BH, Sohn, JH, Wang, SG & Jin, YS 2016, GroE chaperonins ... GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae. Peng Fei Xia, Guo Chang Zhang ... GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae. / Xia, Peng Fei; Zhang, Guo ... GroE chaperonins assisted functional expression of bacterial enzymes in Saccharomyces cerevisiae. In: Biotechnology and ...
Sepsis happens to be the 10th leading reason behind VPS34-IN1 death - AMP-activated protein kinase, stress responses and...
Chaperonin 10 (Hsp10) was lately used to take care of 23 adults with moderate to serious active arthritis rheumatoid within a ... Additionally, ICI-induced SJS/TEN-like reactions can present with an atypical, evolving presentation slowly, and will arise in ... Biweekly administration of chaperonin 10 was well tolerated and effective in reducing the symptoms of arthritis rheumatoid at ... Transcriptional [10] and, mostly, post transcriptional regulation [11] determine TACE activity and levels, as summarized in Fig ...
MESH TREE NUMBER CHANGES - 2010 MeSH. August 28, 2009
D12.776.580.210.175 Chaperonin 60 D12.776.410.210.180 D8.811.277.40.25.142.500.500 D12.776.580.210.180 D12.776.580.216.210.590. ... 750 Chaperonins D12.776.410.210 D8.811.277.40.25.142 D12.776.580.210 D12.776.580.216.210 Chara B2.150.150 B1.40.150.150 ... B1.650.388.100.100.195 Chaperonin 10 D12.776.410.210.175 D12.776.580.216.210.590.500 ... B1.650.388.100.10 Acorus B6.388.100.10.500 B1.650.388.100.10.500 Acremonium B5.381.25 B1.300.381.25 Acrosin D8.811.277.656. ...
β-Catenin Knockdown Affects Mitochondrial Biogenesis and Lipid Metabolism in Breast Cancer Cells
chaperonin 4.69 + 3.09E-03 translation initiation factor 4.57 + 1.93E-10 ... PANTHER Protein class overrepresentation test (release 20170413). p.10 FIGURE 4 , LC-MS/MS analysis of β-catenin knockdown in ... Briefly, the culture medium was removed and 100 µl of RPMI-phenol free medium containing 10 µl of MTT stock solution, 5 mg/ml ... by selection with puromycin at 10 µg/ml for 2 weeks. Western Blotting and Real time PCR were carried out to assess down- ...
McKusick-Kaufman syndrome: MedlinePlus Genetics
The proteins structure suggests that it may act as a chaperonin, which is a type of protein that helps fold. other proteins. ... Although the structure of the MKKS protein is similar to that of a chaperonin, some recent studies have suggested that protein ... Mutation of a gene encoding a putative chaperonin causes McKusick-Kaufman syndrome. Nat Genet. 2000 May;25(1):79-82. doi: ... 2002 Sep 10 [updated 2020 Dec 3]. In: Adam MP, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH, Gripp KW, Amemiya A, editors. ...
McKusick-Kaufman syndrome: MedlinePlus Genetics
The proteins structure suggests that it may act as a chaperonin, which is a type of protein that helps fold. other proteins. ... Although the structure of the MKKS protein is similar to that of a chaperonin, some recent studies have suggested that protein ... Mutation of a gene encoding a putative chaperonin causes McKusick-Kaufman syndrome. Nat Genet. 2000 May;25(1):79-82. doi: ... 2002 Sep 10 [updated 2020 Dec 3]. In: Adam MP, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH, Gripp KW, Amemiya A, editors. ...
CoP: Co-expressed Biological Processes
Publications - Single-Molecule Biophysics Section - NIDDK
Probing the mechanism of inhibition of amyloid-β(1-42)-induced neurotoxicity by the chaperonin GroEL.. Wälti MA, Steiner J, ... Elife (2021 Mar 29) 10. Abstract/Full Text. Diverse Folding Pathways of HIV-1 Protease Monomer on a Rugged Energy Landscape.. ... Science (2015 Sep 25) 349:1504-10. Abstract/Full Text. Testing Landscape Theory for Biomolecular Processes with Single Molecule ...
Nanomedicine - Center for Protein Folding Machinery - 2008 Progress Report
The accuracy of in silico prediction of the chaperonin activity as a function of the chaperonin structure can play an important ... Another important area of effort has been developing tools for engineering both the chaperonin and its substrates. Chaperonins ... Our ABEL (Anti-Brownian ELectrophoretic) trap experiments on single chaperonins in solution show for the first time that TRiC ... Our approach is to use a hybrid of methods to characterize the biophysical and biochemical properties of chaperonins as well as ...
Effect of ubiquitination on Parkinson's Disease associated proteins alpha-synuclein and synphilin-1 in humanized yeast models |...
Chaperonins are cell-signalling. proteins: the unfolding biology of molecular chaperones. Expert Reviews in Molecular Medicine ... PLoS One, 5(10), 2010. ISSN. 1932-6203.. [120] Frank P Marx et al. The proteasomal subunit s6 atpase is a novel synphilin-1 ... the cell, 11(10):3365{3380, 2000. ISSN 1059-1524.. [134] Elina Nikko and Bruno Andre. Evidence for a Direct Role of the Doa4 ... cycle (Georgetown, Tex.), 10(9):1385{1396, may 2011. ISSN 1538-4101.. [137] ME Nickas and MP Yae. Bro1, a novel gene that ...
Johann Deisenhofer - A Superstar of Science
Structural adaptations in the specialized bacteriophage T4 co-chaperonin Gp31 expand the size of the Anfinsen cage. Cell 90 (2 ... The crystal structure of the GroES co-chaperonin at 2.8 Å resolution. Nature 379, 37-45 (1996) ... 10. H.J. Kwon, T.A. Lagace, M.C. McNutt, J.D. Horton, J. Deisenhofer. Molecular basis for LDL receptor recognition by PCSK9. ... 19 (10), 415-421 (1994). 80. B. Kobe, Z. Ma & J. Deisenhofer. Complex between bovine ribonuclease A and porcine ribonuclease ...
GroEL5
- The interaction of two folding intermediate mimetics of the model protein substrate Fyn SH3 with the chaperonin GroEL, a supramolecular foldase/unfoldase machine, has been investigated by 15 N relaxation-based nuclear magnetic resonance spectroscopy (lifetime line broadening, dark state exchange saturation transfer, and relaxation dispersion). (nih.gov)
- Probing the mechanism of inhibition of amyloid-β(1-42)-induced neurotoxicity by the chaperonin GroEL. (nih.gov)
- Single-molecule FRET experiments show for the first time that selected regions in von-Hippel-Lindau (VHL), a tumor suppressor protein can both contract and expand during folding inside the reaction chamber of the bacterial GroEL chaperonin. (nih.gov)
- A sample LAMMPS input file is given below, for a system with a solvated GroEL chaperonin protein. (nih.gov)
- The binding and dissociation process between a chaperonin GroEL and cochaperonin GroES was observed in this TIRFM microfluidic system. (elsevierpure.com)
Proteins6
- 17. Characterization and over-expression of chaperonin t-complex proteins in colorectal cancer. (nih.gov)
- Therefore, mitochondria contain their own set of matrix localized heat shock proteins (HSP) 70 and 90, chaperonins, and proteases. (biomedcentral.com)
- The ultimate goal of our NDC is to engineer chaperonins with new functional properties and/or substrate adaptor molecules to prevent aggregation and/or refold proteins responsible for protein misfolding diseases such as Huntington, Alzheimer, cancer and many others. (nih.gov)
- Hartl and Horwich are cited for their discoveries about the cell's protein-folding machinery, particularly the identification of chaperonin, which shifted the paradigm of how proteins fold. (nih.gov)
- The eukaryotic Chaperonin Containing TCP-1 (CCT) is a heterooligomeric chaperonin essential for enabling the cytoskeletal proteins actin and tubulin to fold to their native state. (gu.se)
- In discussing this whole area with Marjorie, she asked whether proteins synthesized in vitro would fold properly in extracts depleted of the known chaperonins (groE, dnaK etc) with antisera. (nih.gov)
20161
- 2016 Oct 1;113(10):2149-2155. (illinois.edu)
Containing TCP1 subunit3
- 2. Overexpression of chaperonin containing TCP1, subunit 3 predicts poor prognosis in hepatocellular carcinoma. (nih.gov)
- 3. Chaperonin containing TCP1, subunit 8 (CCT8) is upregulated in hepatocellular carcinoma and promotes HCC proliferation. (nih.gov)
- 8. Overexpression of chaperonin containing TCP1 subunit 7 has diagnostic and prognostic value for hepatocellular carcinoma. (nih.gov)
Protein4
- 5. Chaperonin Containing TCP-1 Protein Level in Breast Cancer Cells Predicts Therapeutic Application of a Cytotoxic Peptide. (nih.gov)
- A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. (nih.gov)
- A chaperonin 10 heat-shock protein isolated from bacterial sources. (nih.gov)
- Although the structure of the MKKS protein is similar to that of a chaperonin, some recent studies have suggested that protein folding may not be this protein's primary function. (medlineplus.gov)
Hsp101
- Chaperonin 10 (Hsp10) was lately used to take care of 23 adults with moderate to serious active arthritis rheumatoid within a randomized double-blind multicenter scientific trial. (ampkpathway.com)
Putative chaperonin1
- Mutation of a gene encoding a putative chaperonin causes McKusick-Kaufman syndrome. (medlineplus.gov)
TRiC5
- 19. The cytosolic chaperonin CCT/TRiC and cancer cell proliferation. (nih.gov)
- 20. Genetic expansion of chaperonin-containing TCP-1 (CCT/TRiC) complex subunits yields testis-specific isoforms required for spermatogenesis in planarian flatworms. (nih.gov)
- In the past three years, we have focused our efforts on refining various biophysical and computational tools to make them suitable for characterizing the chaperonin TRiC from mammalian sources and the related but simpler Mn-cpn from thermobacteria. (nih.gov)
- Our ABEL ( A nti- B rownian EL ectrophoretic) trap experiments on single chaperonins in solution show for the first time that TRiC can bind to different numbers of ATP molecules, yet still shows the average cooperativity observed in bulk experiments. (nih.gov)
- This methodology opens up many future experiments studying our model chaperonins: TRiC and Mm-cpn in interaction with targeted substrates related to known diseases. (nih.gov)
Bacterial1
- The co-expression of bacterial chaperonins in S. cerevisiae is a promising post-translational strategy for the functional expression of bacterial enzymes in yeast. (illinois.edu)
Characterization1
- The past year has brought us close to accomplishing our initial aims and anticipated milestones in the quantitative characterization of both chaperonins, which were not possible at the beginning of the project. (nih.gov)
Complexes2
Yeast2
Substrate1
- This will provide the requisite structural framework for Mn-cpn chaperonin engineering and substrate-adaptor design. (nih.gov)
Science1
- Science (2015 Sep 25) 349:1504-10. (nih.gov)
Effective2
- Biweekly administration of chaperonin 10 was well tolerated and effective in reducing the symptoms of arthritis rheumatoid at least for a while [179]. (ampkpathway.com)
- The dynamic motions of substrates are important factors to consider in the design of an effective chaperonin. (nih.gov)
Expression1
- 15. Increased expression of cytosolic chaperonin CCT in human hepatocellular and colonic carcinoma. (nih.gov)
Structure1
- Modified chaperonin polypeptides may be assembled into double-ringed chaperonin structure. (patentpc.com)
Identification1
- 11. Chaperonin containing TCP1 as a marker for identification of circulating tumor cells in blood. (nih.gov)
Order1
- The chaperonin structures are capable of forming higher order structures, such as nanofilaments and nanoarrays that can be used for nanodevices or nanocoatings. (patentpc.com)
Protein6
- 10. Mitochondrial heat shock protein (Hsp) 70 and Hsp10 cooperate in the formation of Hsp60 complexes. (nih.gov)
- A group I chaperonin protein that forms a lid-like structure which encloses the non-polar cavity of the chaperonin complex. (nih.gov)
- A chaperonin 10 heat-shock protein isolated from bacterial sources. (nih.gov)
- Although the structure of the MKKS protein is similar to that of a chaperonin, some recent studies have suggested that protein folding may not be this protein's primary function. (medlineplus.gov)
- Co-chaperonin implicated in mitochondrial protein import and macromolecular assembly. (nih.gov)
- In a cyclic reaction, Hsp60 ring complexes bind one unfolded substrate protein per ring, followed by the binding of ATP and association with 2 heptameric rings of the co-chaperonin Hsp10. (nih.gov)
Hsp102
20202
- 183(2): 457-473.e20, 2020 10 15. (bvsalud.org)
- 2002 Sep 10 [updated 2020 Dec 3]. (medlineplus.gov)
Characterization1
- The past year has brought us close to accomplishing our initial aims and anticipated milestones in the quantitative characterization of both chaperonins, which were not possible at the beginning of the project. (nih.gov)
Substrates3
- Our approach is to use a hybrid of methods to characterize the biophysical and biochemical properties of chaperonins as well as develop engineering strategies to allow the design of chaperonins or substrates with new functionality. (nih.gov)
- Another important area of effort has been developing tools for engineering both the chaperonin and its substrates. (nih.gov)
- The dynamic motions of substrates are important factors to consider in the design of an effective chaperonin. (nih.gov)
Hsp601
- The functional units of these chaperonins consist of heptameric rings of the large subunit Hsp60, which function as a back-to-back double ring. (nih.gov)
Assembly1
- Even though their chaperonin function is debated, scientific evidence demonstrated that they are required for initial BBSome assembly in vitro. (nih.gov)
Large1
- Chaperonins are large oligomeric complexes that undergo an elaborate set of conformational changes during the reaction cycle that promotes polypeptide folding. (nih.gov)
Provide1
- This will provide the requisite structural framework for Mn-cpn chaperonin engineering and substrate-adaptor design. (nih.gov)