Caulobacteraceae
Caulobacter crescentus
Caulobacter
Encyclopedias as Topic
Cell Cycle
The complex series of phenomena, occurring between the end of one CELL DIVISION and the end of the next, by which cellular material is duplicated and then divided between two daughter cells. The cell cycle includes INTERPHASE, which includes G0 PHASE; G1 PHASE; S PHASE; and G2 PHASE, and CELL DIVISION PHASE.
Logic
The science that investigates the principles governing correct or reliable inference and deals with the canons and criteria of validity in thought and demonstration. This system of reasoning is applicable to any branch of knowledge or study. (Random House Unabridged Dictionary, 2d ed & Sippl, Computer Dictionary, 4th ed)
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
Skin
Volatile Organic Compounds
Microbiota
Bacteria
One of the three domains of life (the others being Eukarya and ARCHAEA), also called Eubacteria. They are unicellular prokaryotic microorganisms which generally possess rigid cell walls, multiply by cell division, and exhibit three principal forms: round or coccal, rodlike or bacillary, and spiral or spirochetal. Bacteria can be classified by their response to OXYGEN: aerobic, anaerobic, or facultatively anaerobic; by the mode by which they obtain their energy: chemotrophy (via chemical reaction) or PHOTOTROPHY (via light reaction); for chemotrophs by their source of chemical energy: CHEMOLITHOTROPHY (from inorganic compounds) or chemoorganotrophy (from organic compounds); and by their source for CARBON; NITROGEN; etc.; HETEROTROPHY (from organic sources) or AUTOTROPHY (from CARBON DIOXIDE). They can also be classified by whether or not they stain (based on the structure of their CELL WALLS) with CRYSTAL VIOLET dye: gram-negative or gram-positive.
Metagenome
Dog Diseases
Brucellaceae
RNA, Ribosomal, 16S
DNA, Ribosomal
Genes, rRNA
Sphingomonas yabuuchiae sp. nov. and Brevundimonas nasdae sp. nov., isolated from the Russian space laboratory Mir. (1/35)
On the basis of phenotypic and genotypic characteristics and 16S rRNA gene sequence analysis, novel species belonging to the genera Sphingomonas and Brevundimonas were identified from samples taken from the Russian space laboratory Mir. Strain A1-18(T) was isolated from the air. 16S rDNA sequence analysis showed that strain A1-18(T) formed a coherent cluster with Sphingomonas sanguinis, Sphingomonas parapaucimobilis, Sphingomonas paucimobilis and Sphingomonas roseiflava with sequence similarity of 97.5-98.6 %. Similar to other Sphingomonas species, the G+C content was 66.1 mol%, but DNA-DNA hybridization rates at optimal temperatures among these related species were only 24.7-51.7 %. Strain A1-18(T) can be differentiated biochemically from related species. Strain W1-2B(T) was isolated from condensation water. It forms a distinct lineage within the genus Brevundimonas, forming a coherent cluster with Brevundimonas vesicularis, Brevundimonas aurantiaca and Brevundimonas intermedia. 16S rDNA sequence similarities were 98.6-99.5 % and the G+C content was 66.5 mol%, similar to other Brevundimonas species, but DNA-DNA relatedness was only 50.2-54.8 %. Strain W1-2B(T) also showed some differential biochemical properties from its related species. A series of polyphasic taxonomic studies led to the proposal of two novel species, Sphingomonas yabuuchiae sp. nov. (type strain A1-18(T)=GTC 868(T)=JCM 11416(T)=DSM 14562(T)) and Brevundimonas nasdae sp. nov. (type strain W1-2B(T)=GTC 1043(T)=JCM 11415(T)=DSM 14572(T)). (+info)Woodsholea maritima gen. nov., sp. nov., a marine bacterium with a low diversity of polar lipids. (2/35)
Two cauliform bacteria (CM243T and CM251) isolated by J. Poindexter from the Atlantic Ocean were characterized by 16S rRNA gene sequencing, TaqI restriction fragment length polymorphism and single-strand conformation polymorphism analyses of the internally transcribed 16S-23S rDNA spacer (ITS1) region, analysis of fatty acids from cellular lipids, mass spectrometry of polar lipids and physiological properties. The two strains showed very low diversity of polar lipids with diacyl-sulfoquinovosyl glycerols as the predominant lipids. The two bacterial strains were observed to have nearly identical 16S rRNA gene sequences and could not be differentiated by their ITS1 regions. The isolates differed from species of the genus Maricaulis by their 16S rRNA gene sequences, polar lipids and fatty acid patterns. On the basis of the genotypic analyses and estimations of phylogenetic similarities, physiological and chemotaxonomic characteristics, it is proposed that the isolates represent a new genus and species, for which the name Woodsholea maritima gen. nov., sp. nov. (type strain CM243T=VKM B-1512T=LMG 21817T) is proposed. (+info)Ecological significance of microdiversity: identical 16S rRNA gene sequences can be found in bacteria with highly divergent genomes and ecophysiologies. (3/35)
A combination of cultivation-based methods with a molecular biological approach was used to investigate whether planktonic bacteria with identical 16S rRNA gene sequences can represent distinct eco- and genotypes. A set of 11 strains of Brevundimonas alba were isolated from a bacterial freshwater community by conventional plating or by using a liquid most-probable-number (MPN) dilution series. These strains had identical 16S rRNA gene sequences and represented the dominant phylotype in the plateable fraction, as well as in the highest positive dilutions of the MPN series. However, internally transcribed spacer and enterobacterial repetitive intergenic consensus PCR fingerprinting analyses, as well as DNA-DNA hybridization analyses, revealed great genetic diversity among the 11 strains. Each strain utilized a specific combination of 59 carbon substrates, and the niche overlap indices were low, suggesting that each strain occupied a different ecological niche. In dialysis cultures incubated in situ, each strain had a different growth rate and cell yield. We thus demonstrated that the B. alba strains represent distinct populations with genetically determined adaptations and probably occupy different ecological niches. Our results have implications for assessment of the diversity and biogeography of bacteria and increase the perception of natural diversity beyond the level of 16S rRNA gene sequences. (+info)Phenylobacterium lituiforme sp. nov., a moderately thermophilic bacterium from a subsurface aquifer, and emended description of the genus Phenylobacterium. (4/35)
A facultative anaerobic bacterium, strain FaiI3(T), was isolated from samples collected from the free-flowing waters of a bore well (Fairlea Bore, registration number 3768) which taps into the Australian Great Artesian Basin subsurface thermal aquifer. Strain FaiI3(T) developed yellow to pale-yellow colonies (0.5-1.5 mm) after 48 h. The non-spore forming rods (0.5x1-3 microm) were slightly curved, occurred singly and as pairs and were motile with a single polar flagellum. Cells tended to form clumps in liquid medium and rosettes were commonly observed. The cells stained Gram-negative and electron micrographs of thin sections revealed a multi-layered complex Gram-negative cell wall structure. Strain FaiI3(T) grew optimally at 40-41 degrees C, with growth observed at 45 degrees C but not at 50 degrees C. The pH growth range was between pH 6 and 9 and optimal growth occurred between pH 6 and 6.5. Strain FaiI3(T) grew best with yeast extract as the sole carbon and energy source. Peptone, yeast extract, acetate, xylose, sucrose, glucose, glycerol, succinate, butyrate, lactate, fumarate, citrate, L-phenylalanine, cellobiose and gelatin supported growth but maltose, fructose, glycine, ethanol, benzoate and oxalate did not. Tyrosine was produced from L-phenylalanine. Strain FaiI3(T) was catalase-positive and oxidase-negative and did not hydrolyse starch. Growth was inhibited by neomycin, tetracycline, streptomycin, chloramphenicol, ampicillin, vancomycin and spectinomycin. The G+C content was determined to be 66.5+/-0.5 mol%. On the basis of the 16S rRNA gene sequence analysis, strain FaiI3(T) was assigned as a novel species of the genus Phenylobacterium, Phenylobacterium lituiforme sp. nov. in the order Caulobacterales, subclass alpha-Proteobacteria, class Proteobacteria. The type strain is FaiI3(T) (=ATCC BAA-294(T)=DSM 14363(T)). (+info)Brevundimonas mediterranea sp. nov., a non-stalked species from the Mediterranean Sea. (5/35)
Six strains of Gram-negative, rod-shaped, non-spore-forming bacteria were isolated from the Mediterranean Sea. 16S rRNA gene sequence analysis indicated that the strains were affiliated within the alphaproteobacterial genus Brevundimonas, with Brevundimonas intermedia (99.4 %) and Brevundimonas vesicularis (99.2 %) as their closest relatives. This affiliation was supported by chemotaxonomic data (major polar lipids: phosphatidyl diacylglycerol, sulfoquinovosyl diacylglycerol and phosphatidyl glucopyranosyl diacylglycerol; major fatty acids: C(18 : 1), C(16 : 0), C(16 : 1), C(15 : 0), C(17 : 1)omega8c, 11-Me-C(18 : 1)omega5t). The results of DNA-DNA hybridization and physiological and biochemical tests allowed genotypic and phenotypic differentiation of the strains from all recognized Brevundimonas species. The strains therefore represent a novel species, for which the name Brevundimonas mediterranea sp. nov. is proposed, with the type strain V4.BO.10T)(=LMG 21911T=CIP 107934T). (+info)Asticcacaulis taihuensis sp. nov., a novel stalked bacterium isolated from Taihu Lake, China. (6/35)
A novel stalked bacterium, designated strain T3-B7(T), was isolated from sediment of Taihu Lake, Jiangsu Province, China, and its taxonomy was studied by using a polyphasic approach. Cell morphology, physiological and biochemical properties, and polar lipids indicated that strain T3-B7(T) represented a member of the genus Asticcacaulis. Based on 16S rRNA gene sequence similarity analysis, strain T3-B7(T) was found to be phylogenetically related to Asticcacaulis biprosthecium DSM 4723(T) (98.5 %) and Asticcacaulis excentricus DSM 4724(T) (95.0 %), but could be differentiated from these two species on the basis of the number and position of prosthecae, assimilation of sugars, nitrate reduction and tolerance to NaCl. Levels of DNA-DNA relatedness of strain T3-B7(T) to A. biprosthecium DSM 4723(T) and A. excentricus DSM 4724(T) were 37.1 and 18.0 %, respectively. The G + C content of strain T3-B7(T) was 59 mol% (T(m)). It is concluded that strain T3-B7(T) represents a novel species of the genus Asticcacaulis, for which the name of Asticcacaulis taihuensis sp. nov. is proposed. The type strain is T3-B7(T) (=AS 1.3431(T) = JCM 12463(T)). (+info)Elucidation of a carotenoid biosynthesis gene cluster encoding a novel enzyme, 2,2'-beta-hydroxylase, from Brevundimonas sp. strain SD212 and combinatorial biosynthesis of new or rare xanthophylls. (7/35)
A carotenoid biosynthesis gene cluster mediating the production of 2-hydroxyastaxanthin was isolated from the marine bacterium Brevundimonas sp. strain SD212 by using a common crtI sequence as the probe DNA. A sequence analysis revealed this cluster to contain 12 open reading frames (ORFs), including the 7 known genes, crtW, crtY, crtI, crtB, crtE, idi, and crtZ. The individual ORFs were functionally analyzed by complementation studies using Escherichia coli that accumulated various carotenoid precursors due to the presence of other bacterial crt genes. In addition to functionally identifying the known crt genes, we found that one (ORF11, named crtG) coded for a novel enzyme, carotenoid 2,2'-beta-hydroxylase, which showed intriguingly partial homology with animal sterol-C5-desaturase. When this crtG gene was introduced into E. coli accumulating zeaxanthin and canthaxanthin, the resulting transformants produced their 2-hydroxylated and 2,2'-dihydroxylated products which were structurally novel or rare xanthophylls, as determined by their nuclear magnetic resonance and high-performance liquid chromatography/photodiode array detector/atmospheric pressure chemical ionization mass spectrometry spectral data. The new carotenoid produced was suggested to have a strong inhibitory effect on lipid peroxidation. (+info)Phenylobacterium koreense sp. nov., isolated from South Korea. (8/35)
A Gram-negative, aerobic, rod-shaped, non-spore-forming bacterium, Slu-01(T), was isolated from activated sludge from a wastewater treatment plant in Daejeon, South Korea. After 3 days on R2A medium, strain Slu-01(T) developed colourless colonies (0.7-1.2 mm). The non-motile rods (0.7-1.0 x 1.0-2.0 microm) were slightly curved and occurred singly and in pairs. No filamentous cells were found. On the basis of 16S rRNA gene sequence similarity, strain Slu-01(T) was shown to belong to the family Caulobacteraceae and was most closely related to Phenylobacterium immobile (96.6%) and Phenylobacterium lituiforme (96.5%). The genomic DNA G+C content of strain Slu-01(T) was 68.1 mol%, within the range of 67.3-68.4 mol% for the genus Phenylobacterium. Chemotaxonomic data (major ubiquinone, Q-10; major fatty acids C(18:1)omega7c, C(16:0), C(15:0) and C(17:0)) and 16S rRNA gene sequence analysis supported the affiliation of strain Slu-01(T) to the genus Phenylobacterium. However, DNA-DNA hybridization data and phenotypic properties showed that strain Slu-01(T) could be distinguished from the two other Phenylobacterium species with validly published names. Thus, it is suggested that strain Slu-01(T) represents a novel species of the genus Phenylobacterium, for which the name Phenylobacterium koreense is proposed. The type strain is Slu-01(T) (=KCTC 12206(T)=IAM 15119(T)). (+info)
Brevundimonas - Wikipedia
Brevundimonas diminuta (Leifson and Hugh) Segers et al. ATCC ® 191
Brevundimonas diminuta (Leifson and Hugh) Segers et al. ATCC ® 191
Pseudomonas vesicularis bacteraemia<...
Species: Pseudomonas vesicularis
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Caulobacter crescentus
The Caulobacter cell cycle regulatory system controls many modular subsystems that organize the progression of cell growth and reproduction. A control system constructed using biochemical and genetic logic circuitry organizes the timing of initiation of each of these subsystems. The central feature of the cell cycle regulation is a cyclical genetic circuit-a cell cycle engine-that is centered around the successive interactions of five master regulatory proteins: DnaA, GcrA, CtrA, SciP, and CcrM whose roles were worked out by the laboratories of Lucy Shapiro and Harley McAdams.[8][9][10] These five proteins directly control the timing of expression of over 200 genes. The five master regulatory proteins are synthesized and then eliminated from the cell one after the other over the course of the cell cycle. Several additional cell signaling pathways are also essential to the proper functioning of this cell cycle engine. The principal role of these signaling pathways is to ensure reliable production ...
Senarai genus Bakteria Bahasa Melayu, ensiklopedia bebas
Famili Caulobacteraceae *Genus Asticcacaulis. *Genus Brevundimonas. *Genus Caulobacter. *Genus Phenylobacterium. Order ...
Phenylobacterium
... is a Gram negative, strictly aerobic non-motile and bacterial genus from the family of Caulobacteraceae which ...
List of bacteria genera
Family Caulobacteraceae Genus Asticcacaulis Genus Brevundimonas Genus Caulobacter Genus Phenylobacterium Family ...
List of MeSH codes (B03)
Caulobacteraceae MeSH B03.440.400.425.288.100 - Caulobacter MeSH B03.440.400.425.288.100.100 - Caulobacter crescentus MeSH ... Caulobacteraceae MeSH B03.660.050.090.100 - Caulobacter MeSH B03.660.050.090.100.100 - Caulobacter crescentus MeSH B03.660. ...
Caulobacteraceae
Like all Proteobacteria, the Caulobacteraceae are gram-negative. Caulobacteraceae includes the genera Asticcacaulis, ... Caulobacteraceae is a family of proteobacteria, given its own order (Caulobacterales) within the alpha subgroup. ...
Alfaproteobacterias, a enciclopedia libre
A clase Alphaproteobacteria comprende dez ordes, que son: Magnetococcales, Rhodobacterales, Rhodospirillales, Rickettsiales, Sphingomonadales, Caulobacterales, Kiloniellales, Kordiimonadales, Parvularculales e Sneathiellales.[4][5] Nas árbores filoxenéticas baseadas en secuencias concatenadas de grandes conxuntos de datos de proteínas, as especies destes ordes das que xa se secuenciou o xenoma ramifícanse na seguinte orde, desde a rama máis antiga á máis recente: Magnetococcales-Rickettsiales-Rhodospirillales-Sphingomonadales-Rhodobacterales-(Caulobacterales-Parvularculales)- Rhizobiales.,[6][7][8] As análises comparativas dos xenomas secuenciados levaron á descuberta de moitas mutacións por insercións e delecións (indeis) conservados en proteínas amplamente distribuídas e nas proteínas completas (é dicir, proteínas "sinatura"), que son características distintivas ou ben de todas as Alphaproteobacteria, ou ben das súas ordes principais (Rhizobiales, Rhodobacterales, ...
Caulobacteraceae - Wikipedia
Caulobacteraceae
Family Caulobacteraceae. Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (→) only indicates ... Caulobacteraceae Henrici and Johnson 1935, familia. Type genus: ¤ Caulobacter Henrici and Johnson 1935 (Approved Lists 1980). ... n. Caulobacteraceae, the Caulobacter family. Approved Lists reference: SKERMAN (V.B.D.), McGOWAN (V.) and SNEATH (P.H.A.) ( ...
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Caulobacter crescentus - Wikipedia
The Caulobacter cell cycle regulatory system controls many modular subsystems that organize the progression of cell growth and reproduction. A control system constructed using biochemical and genetic logic circuitry organizes the timing of initiation of each of these subsystems. The central feature of the cell cycle regulation is a cyclical genetic circuit-a cell cycle engine-that is centered around the successive interactions of five master regulatory proteins: DnaA, GcrA, CtrA, SciP, and CcrM whose roles were worked out by the laboratories of Lucy Shapiro and Harley McAdams.[8][9][10] These five proteins directly control the timing of expression of over 200 genes. The five master regulatory proteins are synthesized and then eliminated from the cell one after the other over the course of the cell cycle. Several additional cell signaling pathways are also essential to the proper functioning of this cell cycle engine. The principal role of these signaling pathways is to ensure reliable production ...
UniProt: A0A0Q7E286 9CAUL
UniProt: F4QHD7 9CAUL
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Contact-dependent killing by Caulobacter crescentus via cell surface-associated, glycine zipper proteins | eLife
The Family Caulobacteraceae. In: Rosenberg E, DeLong E. F, Lory S, Stackebrandt E, Thompson F, editors. The Prokaryotes. Berlin ... We have now tested another closely related species, Asticcacaulis excentricus, a member of the Caulobacteraceae family, and ... crescentus producers against three members of the Caulobacteraceae family: Caulobacter segnis, Brevundimonas subvibrioides sp. ... of killing other Caulobacter cells lacking the CdzI immunity protein and at least two other members of the Caulobacteraceae ...
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B) Alignment of the FISH probe sequence used in this study to different members of the Caulobacteraceae and E. coli. The arrow ... Indeed, when we tested if other C. crescentus isolates and other members of the Caulobacteraceae would form filaments under ... Fluorescent in situ hybridization (FISH).A specific FISH probe was designed based on the Caulobacteraceae probe (accession no. ... B) Yearly average of the relative abundances of species belonging to the Caulobacter genus and residual Caulobacteraceae. (C) ...
Identification of Nitrogen-Incorporating Bacteria in Petroleum-Contaminated Arctic Soils by Using [15N]DNA-Based Stable Isotope...
In addition to being the most highly represented family, the Sphingomonadaceae, along with the Caulobacteraceae, were the most ... perhaps leading the Caulobacteraceae to be uniquely adapted to this region. More detailed studies of these organisms may help ... The successful growth of Caulobacteraceae in this and other contaminated CFS-Alert soils (Yergeau et al., unpublished) is ...
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Publication : USDA ARS
Phenylobacterium - Wikipedia
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254780593
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Caulobacteraceae/gen tica. Caulobacteraceae/isolamento & purifica o. DNA Bacteriano/gen tica. cidos Graxos/qu mica. Hibridiza o ... Caulobacteraceae/classifica o. Florestas. Filogenia. Microbiologia do Solo. [Mh] Termos MeSH secund rio:. T cnicas de Tipagem ... analysis based on its 16S rRNA gene sequence indicated that strain CA-15 formed a lineage within the family Caulobacteraceae of ...
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Code System Concept
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Caulobacter2
- Caulobacteraceae , the Caulobacter family. (bacterio.net)
- Caulobacteraceae includes the genera Asticcacaulis, Brevundimonas, Phenylobacterium and Caulobacter. (wikipedia.org)
Caulobacterales1
- Caulobacteraceae is a family of proteobacteria, given its own order (Caulobacterales) within the alpha subgroup. (wikipedia.org)
Proteobacteria1
- Like all Proteobacteria, the Caulobacteraceae are gram-negative. (wikipedia.org)
Brevundimonas1
- IMPORTANCE Brevundimonas is a genus of the family Caulobacteraceae and comprises 33 species. (bvsalud.org)
Genus1
- Phenylobacterium is a Gram negative, strictly aerobic non-motile and bacterial genus from the family of Caulobacteraceae which can grow on chloridazon-mineral salts. (wikipedia.org)
Alphaproteobacteria2
- [ 6 ] [ 9 ] Análises filoxenéticas e indeis conservados en gran cantidade doutras proteínas fornecen evidencias de que as Alphaproteobacteria se ramificaron antes ca moitos outros filos e clases de bacterias, agás as Betaproteobacteria e Gammaproteobacteria . (wikipedia.org)
- 1,0 1,1 O nome científico en latín do taxon é Alphaproteobacteria , polo que se pasa ao galego como alfaproteobacterias. (wikipedia.org)
Organisms1
- For organisms in the Caulobacteraceae family, it is well established that stalk synthesis is directly tied to their dimorphic life cycle in which non-dividing motile swarmer cells differentiate into replicating sessile stalked cells. (rutgers.edu)
Family1
- 1957) assigned the family Caulobacteraceae Henrici and Johnson 1935 (Approved Lists 1980) to this suborder. (dsmz.de)