A family of marine, gram-negative PROTEOBACTERIA including the genera ALTEROMONAS; Colwellia; Idiomarina; MARINOBACTER; MORITELLA; PSEUDOALTEROMONAS; and SHEWANELLA.
A genus of gram-negative, curved or straight rod-shaped bacteria, in the family ALTEROMONADACEAE. They are chemo-organotrophic, halophilic, and associated with cold marine habitats.
Release of oil into the environment usually due to human activity.
A body of water located at the southeastern corner of North America. It is bordered by the states to the north of Florida, Alabama, Mississippi, Louisiana, Texas; by five Mexican states to the west: Tamaulipas, Veracruz, Tabasco, Campeche, Yucatan; and by Cuba to the southeast.
Naturally occurring complex liquid hydrocarbons which, after distillation, yield combustible fuels, petrochemicals, and lubricants.
A mass of organic or inorganic solid fragmented material, or the solid fragment itself, that comes from the weathering of rock and is carried by, suspended in, or dropped by air, water, or ice. It refers also to a mass that is accumulated by any other natural agent and that forms in layers on the earth's surface, such as sand, gravel, silt, mud, fill, or loess. (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed, p1689)
Chemical compounds which pollute the water of rivers, streams, lakes, the sea, reservoirs, or other bodies of water.
A combustible, gaseous mixture of low-molecular weight PARAFFIN hydrocarbons, generated below the surface of the earth. It contains mostly METHANE and ETHANE with small amounts of PROPANE; BUTANES; and higher hydrocarbons, and sometimes NITROGEN; CARBON DIOXIDE; HYDROGEN SULFIDE; and HELIUM. (from McGraw-Hill Dictionary of Scientific and Technical Terms, 6th ed)
Serves as the biological precursor of insect chitin, of muramic acid in bacterial cell walls, and of sialic acids in mammalian glycoproteins.
A necessary enzyme in the metabolism of galactose. It reversibly catalyzes the conversion of UDPglucose to UDPgalactose. NAD+ is an essential component for enzymatic activity. EC 5.1.3.2.
Enzymes that catalyze the epimerization of chiral centers within carbohydrates or their derivatives. EC 5.1.3.
A genus of gram-negative, facultatively anaerobic, rod-shaped bacteria that utilizes citrate as a sole carbon source. It is pathogenic for humans, causing enteric fevers, gastroenteritis, and bacteremia. Food poisoning is the most common clinical manifestation. Organisms within this genus are separated on the basis of antigenic characteristics, sugar fermentation patterns, and bacteriophage susceptibility.
A procedure consisting of a sequence of algebraic formulas and/or logical steps to calculate or determine a given task.
A serotype of Salmonella enterica that is a frequent agent of Salmonella gastroenteritis in humans. It also causes PARATYPHOID FEVER.
A genus of gram-negative, straight or curved rods which are motile by means of a single, polar flagellum. Members of this genus are found in coastal waters and the open ocean. (From Bergey's Manual of Determinative Bacteriology, 9th ed)
Constituent of 30S subunit prokaryotic ribosomes containing 1600 nucleotides and 21 proteins. 16S rRNA is involved in initiation of polypeptide synthesis.
A plant genus of the family RUTACEAE. They bear the familiar citrus fruits including oranges, grapefruit, lemons, and limes. There are many hybrids which makes the nomenclature confusing.
The study of the origin, structure, development, growth, function, genetics, and reproduction of organisms which inhabit the OCEANS AND SEAS.
The relationships of groups of organisms as reflected by their genetic makeup.
A group of the proteobacteria comprised of facultatively anaerobic and fermentative gram-negative bacteria.
A person's view of himself.
An island in the Gulf of St. Lawrence constituting a province of Canada in the eastern part of the country. It is very irregular in shape with many deep inlets. Its capital is Charlottetown. Discovered by the French in 1534 and originally named Ile Saint-Jean, it was renamed in 1799 in honor of Prince Edward, fourth son of George III and future father of Queen Victoria. (From Webster's New Geographical Dictionary, 1988, p981 & Room, Brewer's Dictionary of Names, 1992, p433)
Graphic representations, especially of the face, of real persons, usually posed, living or dead. (From Thesaurus for Graphic Materials II, p540, 1995)
1861-1865 conflict between the Union (Northern states) and the 11 Southern states that seceded and were organized as the Confederate States of America.
Individuals' concept of their own bodies.
The most diversified of all fish orders and the largest vertebrate order. It includes many of the commonly known fish such as porgies, croakers, sunfishes, dolphin fish, mackerels, TUNA, etc.
Marine ridges composed of living CORALS, coral skeletons, calcareous algae, and other organisms, mixed with minerals and organic matter. They are found most commonly in tropical waters and support other animal and plant life.
A collective genome representative of the many organisms, primarily microorganisms, existing in a community.
A class in the phylum CNIDARIA, comprised mostly of corals and anemones. All members occur only as polyps; the medusa stage is completely absent.
Generally refers to the digestive structures stretching from the MOUTH to ANUS, but does not include the accessory glandular organs (LIVER; BILIARY TRACT; PANCREAS).
The full collection of microbes (bacteria, fungi, virus, etc.) that naturally exist within a particular biological niche such as an organism, soil, a body of water, etc.
One of the three domains of life (the others being Eukarya and ARCHAEA), also called Eubacteria. They are unicellular prokaryotic microorganisms which generally possess rigid cell walls, multiply by cell division, and exhibit three principal forms: round or coccal, rodlike or bacillary, and spiral or spirochetal. Bacteria can be classified by their response to OXYGEN: aerobic, anaerobic, or facultatively anaerobic; by the mode by which they obtain their energy: chemotrophy (via chemical reaction) or PHOTOTROPHY (via light reaction); for chemotrophs by their source of chemical energy: CHEMOLITHOTROPHY (from inorganic compounds) or chemoorganotrophy (from organic compounds); and by their source for CARBON; NITROGEN; etc.; HETEROTROPHY (from organic sources) or AUTOTROPHY (from CARBON DIOXIDE). They can also be classified by whether or not they stain (based on the structure of their CELL WALLS) with CRYSTAL VIOLET dye: gram-negative or gram-positive.
The collective designation of three organizations with common membership: the European Economic Community (Common Market), the European Coal and Steel Community, and the European Atomic Energy Community (Euratom). It was known as the European Community until 1994. It is primarily an economic union with the principal objectives of free movement of goods, capital, and labor. Professional services, social, medical and paramedical, are subsumed under labor. The constituent countries are Austria, Belgium, Denmark, Finland, France, Germany, Greece, Ireland, Italy, Luxembourg, Netherlands, Portugal, Spain, Sweden, and the United Kingdom. (The World Almanac and Book of Facts 1997, p842)
A republic located south of HUNGARY, west of ROMANIA and BULGARIA, and part of the former YUGOSLAVIA. The capital is Belgrade.
Organizations involved in all aspects of health planning activities.
A genus of gram-negative rod-shaped bacteria in the class GAMMAPROTEOBACTERIA. They are obligately acidophilic and aerobic, using reduced SULFUR COMPOUNDS to support AUTOTROPHIC GROWTH.
A heavy metal trace element with the atomic symbol Cu, atomic number 29, and atomic weight 63.55.
A strictly autotrophic species of bacteria that oxidizes sulfur and thiosulfate to sulfuric acid. It was formerly called Thiobacillus thiooxidans.
A group (or phylum) of unicellular EUKARYOTA (or algae) possessing CHLOROPLASTS and FLAGELLA.
A publication issued at stated, more or less regular, intervals.
Free-floating minute organisms that are photosynthetic. The term is non-taxonomic and refers to a lifestyle (energy utilization and motility), rather than a particular type of organism. Most, but not all, are unicellular algae. Important groups include DIATOMS; DINOFLAGELLATES; CYANOBACTERIA; CHLOROPHYTA; HAPTOPHYTA; CRYPTOMONADS; and silicoflagellates.
An infraorder of chiefly marine, largely carnivorous CRUSTACEA, in the order DECAPODA, including the genera Cancer, Uca, and Callinectes.
One of the three domains of life (the others being BACTERIA and ARCHAEA), also called Eukarya. These are organisms whose cells are enclosed in membranes and possess a nucleus. They comprise almost all multicellular and many unicellular organisms, and are traditionally divided into groups (sometimes called kingdoms) including ANIMALS; PLANTS; FUNGI; and various algae and other taxa that were previously part of the old kingdom Protista.
A family of DNA plant viruses that infect eukaryotic algae.
Individual's rights to obtain and use information collected or generated by others.
A family of gram-negative bacteria in the order Oceanospirillales.
A bibliographic database that includes MEDLINE as its primary subset. It is produced by the National Center for Biotechnology Information (NCBI), part of the NATIONAL LIBRARY OF MEDICINE. PubMed, which is searchable through NLM's Web site, also includes access to additional citations to selected life sciences journals not in MEDLINE, and links to other resources such as the full-text of articles at participating publishers' Web sites, NCBI's molecular biology databases, and PubMed Central.
"The business or profession of the commercial production and issuance of literature" (Webster's 3d). It includes the publisher, publication processes, editing and editors. Production may be by conventional printing methods or by electronic publishing.

The cold-inducible icl gene encoding thermolabile isocitrate lyase of a psychrophilic bacterium, Colwellia maris. (1/120)

The gene encoding isocitrate lyase (ICL; EC 4.1.3.1) of a psychrophilic bacterium, Colwellia maris, was cloned and sequenced. The ORF of the gene (icl) was 1584 bp long, and the predicted gene product consisted of 528 aa (molecular mass 58150 Da) and showed low homology with the corresponding enzymes from other organisms. The analyses of amino acid content and primary structure of the C. maris ICL suggested that it possessed many features of a cold-adapted enzyme. Primer extension and Northern blot analyses revealed that two species of the icl mRNAs with differential lengths of 5'-untranslated regions (TS1 and TS2) were present, of which the 5' end (TS1 and TS2 sites) were G and A, located at 130 and 39 bases upstream of the translation start codon, respectively. The levels of TS1 and TS2 mRNAs were increased by both acetate and low temperature. The induction of icl expression by low temperature took place in the C. maris cells grown on succinate as the carbon source but not acetate. Furthermore, a similar manner of inductions was also found in the levels of the translation and the enzyme activity in cell-free extract. These results suggest that the icl gene, encoding thermolabile isocitrate lyase, of C. maris is important for acetate utilization and cold adaptation.  (+info)

Psychromonas marina sp. nov., a novel halophilic, facultatively psychrophilic bacterium isolated from the coast of the Okhotsk Sea. (2/120)

A facultatively psychrophilic bacterium, strain 4-22T, was isolated from a cold current off the Monbetsu coast of the Okhotsk Sea in Hokkaido, Japan. The isolate was a rod-shaped facultative anaerobe that reduced nitrate to nitrite and hydrolysed starch, DNA and alginic acid, but not chitin or gelatin. The isolate grew at 0 degrees C, but not at 26 degrees C; the optimum growth temperature was 14-16 degrees C. NaCl was required for growth. The DNA G+C content was 43.5 mol%. The whole-cell fatty acids consisted of significant amounts of an unsaturated fatty acid, C16:1, and a saturated fatty acid, C16:0. A polyunsaturated fatty acid, docosahexaenoic acid (C22:6), was also detected (1.6%). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 4-22T was closely related to Psychromonas antarctica (95.7% similarity). DNA-DNA hybridization revealed a relatedness of 31% between strain 4-22T and P. antarctica. Based on physiological and biochemical characteristics and the phylogenetic position as determined by 16S rRNA gene analysis and DNA-DNA relatedness, it is concluded that the isolate represents a novel species, for which the name Psychromonas marina sp. nov. is proposed. The type strain is 4-22T (= JCM 10501T = IAM 14899T = NCIMB 13792T).  (+info)

Psychromonas kaikoae sp. nov., a novel from the deepest piezophilic bacterium cold-seep sediments in the Japan Trench. (3/120)

Two strains of obligately piezophilic bacteria were isolated from sediment collected from the deepest cold-seep environment with chemosynthesis-based animal communities within the Japan Trench, at a depth of 7434 m. The isolated strains, JT7301 and JT7304T, were closely affiliated with members of the genus Psychromonas on the basis of 16S rDNA sequence analysis. Hybridization values for DNA-DNA relatedness between these strains and the Psychromonas antarctica reference strain were significantly lower than that accepted as the phylogenetic definition of a species. The optimal temperature and pressure for growth of the isolates were 10 degrees C and 50 MPa and they produced both eicosapentaenoic acid (C20:5omega3) and docosahexaenoic acid (C22:6) in the membrane layer. Based on the taxonomic differences observed, the isolated strains appear to represent a novel obligately piezophilic Psychromonas species. The name Psychromonas kaikoae sp. nov. (type strain JT7304T = JCM 11054T = ATCC BAA-363T) is proposed. This is the first proposed obligately piezophilic species of the genus Psychromonas.  (+info)

Microbulbifer salipaludis sp. nov., a moderate halophile isolated from a Korean salt marsh. (4/120)

A Gram-negative, non-motile, non-spore-forming, moderately halophilic rod (strain SM-1T) was isolated from salt marsh around the junction of the Youngsan River and the Yellow Sea in Korea and subjected to a polyphasic taxonomic study. This organism grew optimally at 37 degrees C and was able to grow at 10 and 45 degrees C. It grew optimally in the presence of 2-3% (w/v) NaCl. The major fatty acids in strain SM-1T were iso-C15:0 and C16:0. Strain SM-1T and Microbulbifer hydrolyticus DSM 11525T were characterized by having ubiquinone-8 as the predominant respiratory lipoquinone. The DNA G+C content of strain SM-1T was 59 mol%. Phylogenetic analysis based on 16S rDNA sequences showed that strain SM-1T formed a coherent cluster with M. hydrolyticus; this relationship was supported by a bootstrap resampling value of 100%. The level of 16S rDNA identity between strain SM-1T and the type strain of M. hydrolyticus was 98.6%. The mean level of DNA-DNA relatedness between strain SM-1T and the type strain of M. hydrolyticus was 20.6%. Therefore, on the basis of phenotypic properties, phylogeny and genomic data, strain SM-1T should be placed in the genus Microbulbifer as a member of a novel species, for which the name Microbulbifer salipaludis sp. nov. is proposed. The type strain of the novel species is strain SM-1T (=KCCM 41586T =JCM 11542T).  (+info)

Psychromonas profunda sp. nov., a psychropiezophilic bacterium from deep Atlantic sediments. (5/120)

A psychropiezophilic bacterium, strain 2825T (=LMG 21260T =JCM 11437T), isolated from deep Atlantic sediments at a depth of 2770 m and a temperature of 2 degrees C, was found by polyphasic analysis to represent a novel species of the genus Psychromonas, Psychromonas profunda sp. nov. It is a strict psychrophile and a moderate piezophile, whose degree of piezophily is increased markedly when the temperature is raised to 10 degrees C. The piezophily of P. profunda is intermediate between that of the type species, Psychromonas antarctica, which is not piezophilic, and that of Psychromonas kaikoae, which is an obligate piezophile.  (+info)

Psychromonas arctica sp. nov., a novel psychrotolerant, biofilm-forming bacterium isolated from Spitzbergen. (6/120)

Using starch as a carbon source at a cultivation temperature of 4 degrees C, a number of Gram-negative, aerobic strains was isolated from sea-ice and sea-water samples collected at Spitzbergen in the Arctic. Analysis of the genetic diversity of the novel isolates by random amplification of polymorphic DNA (RAPD) and ERIC fingerprinting revealed a homogenic group of biofilm-forming bacteria that contained small extrachromosomal elements. As a representative of the group, strain Pull 5.3T, isolated from a sea-water sample, was used for detailed characterization. The results of phylogenetic analysis indicated that the newly isolated strain is a member of the gamma-subclass of the Proteobacteria and belongs to the genus Psychromonas. On the basis of DNA-DNA hybridization experiments, chemotaxonomic studies and phenotypic characterization, strain Pull 5.3T (=CECT 5674T =DSM 14288T) clearly represents a novel species, for which the name Psychromonas arctica sp. nov. is proposed.  (+info)

Marinobacter litoralis sp. nov., a moderately halophilic bacterium isolated from sea water from the East Sea in Korea. (7/120)

A Gram-negative, motile, non-spore-forming and moderately halophilic rod-shaped strain, SW-45T, was isolated from sea water of the East Sea in Korea. The organism grew optimally at 30-37 degrees C and grew at 4 and 46 degrees C. It grew in the presence of 0.5-18% (v/w) NaCl, with an optimum of 2-7% NaCl. Strain SW-45T was chemotaxonomically characterized by having ubiquinone-9 (Q-9) as the major respiratory lipoquinone and C16 : 0, C18 : 1omega9c and C16 : 1omega9c as the predominant fatty acids. The DNA G + C content was found to be 55 mol%. Phylogenetic analysis based on 16S rDNA sequences showed that strain SW-45T forms a coherent cluster with the clade comprising the two Marinobacter species. 16S rDNA sequence similarities between strain SW-45T and the Marinobacter species was 94.9% to Marinobacter hydrocarbonoclasticus DSM 8798T and 95.3% to Marinobacter aquaeolei DSM 11845T. Levels of DNA-DNA relatedness between strain SW-45T and the type strains of M. hydrocarbonoclasticus and M. aquaeolei were respectively 4.3 and 5.5%. On the basis of phenotypic properties, phylogeny and genomic data, strain SW-45T (=KCCM 41591T =JCM 11547T) should be placed in the genus Marinobacter as a member of a novel species, for which the name Marinobacter litoralis sp. nov. is proposed. As part of this study, the major respiratory lipoquinone of M. hydrocarbonoclasticus and M. aquaeolei was also found to be Q-9.  (+info)

Genomic analysis and initial characterization of the chitinolytic system of Microbulbifer degradans strain 2-40. (8/120)

The marine bacterium Microbulbifer degradans strain 2-40 produces at least 10 enzyme systems for degrading insoluble complex polysaccharides (ICP). The draft sequence of the 2-40 genome allowed a genome-wide analysis of the chitinolytic system of strain 2-40. The chitinolytic system includes three secreted chitin depolymerases (ChiA, ChiB, and ChiC), a secreted chitin-binding protein (CbpA), periplasmic chitooligosaccharide-modifying enzymes, putative sugar transporters, and a cluster of genes encoding cytoplasmic proteins involved in N-acetyl-D-glucosamine (GlcNAc) metabolism. Each chitin depolymerase was detected in culture supernatants of chitin-grown strain 2-40 and was active against chitin and glycol chitin. The chitin depolymerases also had a specific pattern of activity toward the chitin analogs 4-methylumbelliferyl-beta-D-N,N'-diacetylchitobioside (MUF-diNAG) and 4-methylumbelliferyl-beta-D-N,N',N"-triacetylchitotrioside (MUF-triNAG). The depolymerases were modular in nature and contained glycosyl hydrolase family 18 domains, chitin-binding domains, and polycystic kidney disease domains. ChiA and ChiB each possessed polyserine linkers of up to 32 consecutive serine residues. In addition, ChiB and CbpA contained glutamic acid-rich domains. At 1,271 amino acids, ChiB is the largest bacterial chitinase reported to date. A chitodextrinase (CdxA) with activity against chitooligosaccharides (degree of polymerization of 5 to 7) was identified. The activities of two apparent periplasmic (HexA and HexB) N-acetyl-beta-D-glucosaminidases and one cytoplasmic (HexC) N-acetyl-beta-D-glucosaminidase were demonstrated. Genes involved in GlcNAc metabolism, similar to those of the Escherichia coli K-12 NAG utilization operon, were identified. NagA from strain 2-40, a GlcNAc deacetylase, was shown to complement a nagA mutation in E. coli K-12. Except for the GlcNAc utilization cluster, genes for all other components of the chitinolytic system were dispersed throughout the genome. Further examination of this system may provide additional insight into the mechanisms by which marine bacteria degrade chitin and provide a basis for future research on the ICP-degrading systems of strain 2-40.  (+info)

Saccharophagus degradans ATCC ® 43961D-5™ Designation: Genomic DNA from Saccharophagus degradans strain 2-40 TypeStrain=True Application:
General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes. ...
p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.,/p> ,p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.,/p> ,p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).,/p> ,p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x,sup>64,/sup> + x,sup>4,/sup> + x,sup>3,/sup> + x + 1. The algorithm is described in the ISO 3309 standard. ,/p> ,p class=publication>Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.,br /> ,strong>Cyclic redundancy and other checksums,/strong>,br /> ,a href=http://www.nrbook.com/b/bookcpdf.php>Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993),/a>),/p> Checksum:i ...
In enzymology, a poly (beta-D-mannuronate) lyase (EC 4.2.2.3) is an enzyme that catalyzes the chemical reaction:Eliminative cleavage of polysaccharides containing beta-D-
Gammaproteobacteria belonging and related to the genus Microbulbifer are an emerging group of complex carbohydrate-degrading marine bacteria. Previously, all of the representatives were placed within Microbulbifer or were unclassified. Recently, a new genus, Teredinibacter, represented by a single species, Teredinibacter turnerae, was formed to include an endosymbiotic branch of these organisms. In this study, based on 16S rRNA gene sequence similarity and phenotypic analyses, a new genus, Saccharophagus, is proposed to accommodate the most versatile marine carbohydrate degrader yet identified, Saccharophagus degradans gen. nov., sp. nov. 2-40(T) (=ATCC 43961(T)=DSM 17024(T)). S. degradans strain 2-40(T) can degrade 10 tested complex polysaccharides: agar, alginate, chitin, cellulose, fucoidan, laminarin, pectin, pullulan, starch and xylan. S. degradans 2-40(T) shares 90.5% 16S rRNA gene sequence similarity with the type strain of the Microbulbifer type species, Microbulbifer hydrolyticus ...
Purchase Recombinant Colwellia psychrerythraea Glycerol-3-phosphate acyltransferase(plsY). It is produced in in vitro E.coli expression system. High purity. Good price.
SWISS-MODEL Repository entry for Q21IG1 (PDXH_SACD2), Pyridoxine/pyridoxamine 5-phosphate oxidase. Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
SWISS-MODEL Repository entry for Q21MA1 (COAX_SACD2), Type III pantothenate kinase. Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024)
Extra-cellular Compounds This rod-shaped bacteria is enclosed by two cell membranes and contains flagella for motility. Important adaptations to its survival in such cold environments include production of extracellular polysaccharides which function in protection against cold-damage, known as cryoprotection. The genome has revealed a substantial amount of coding for an extracellular subfamily of σ-70 transcription factors, which among its many roles, can regulate extracellular polymeric synthesis. Genome analysis has also shown a large amount of coding for glycosyl transferases, which are suggested to produce such extracellular polysaccharides. [2] These extracellular polymeric substances (EPS) have been shown to increase extracellular enzymatic activity and stability in C. psychrerythraea. This stabilizing effect, which can potentially benefit several microbial generations, may allow for ever-increasing extreme environments to be tolerated. [7] Genome analysis of C. psychrerythraea has also ...
Three crystal structures of GH117 family have been reported. Two are enzymes from marine bacteria, one from Saccharophagus degradans (PDB: 3R4Y) [4] and one from Zobellia galactanivorans (PDB: 3P2N) [3], the third one is from the human gut bacterium Bacteroidetes plebeius (PDB: 4AK5) [5]. GH117 adopts a five-bladed β-propeller fold and forms a dimer via domain-swapping of the N-terminal HTH (Helix-Turn-Helix) domain (Figure 3) [3]. Interestingly, previous sequences reported from Vibrio sp. JT0107 and Bacillus sp. MK03 contain the conserved domain-swapping signature SxAxxR in the HTH domain. Consistently, these proteins were reported to form multimers (a dimer and an octamer respectively), based on calibrated gel filtration estimations [1, 2]. In contrast, RB13146 (Clade B) lacks the domain-swapping signature, in which the crucial residues are missing. This enzyme from R. baltica thus likely occurs as a monomer and may represent an ancestral form of the GH117 family, which would be limited to ...
University of Maryland research that started with bacteria from the Chesapeake Bay has led to the development of a bacterium, called Saccharophagus degradans which can break down almost any source of biomass, or plant life, into sugars, which can then be converted into ethanol and other biofuels. That process, developed by University of Maryland professors Steve Hutcheson and Ron Weiner, professors of cell biology and molecular genetics, is the foundation of their incubator company Zymetis. They discovered how to produce the enzyme in their own laboratories. The result was Ethazyme, a bacterium that creates a mixture of enzymes-through a patent-pending system which degrades the tough cell walls of cellulosic materials into bio-fuel ready sugars in one step, which are then converted into ethanol and other biofuels at a significantly lower cost and with fewer caustic chemicals than current methods.
University of Maryland research that started with bacteria from the Chesapeake Bay has led to the development of a bacterium, called Saccharophagus degradans which can break down almost any source of biomass, or plant life, into sugars, which can then be converted into ethanol and other biofuels. That process, developed by University of Maryland professors Steve Hutcheson and Ron Weiner, professors of cell biology and molecular genetics, is the foundation of their incubator company Zymetis. They discovered how to produce the enzyme in their own laboratories. The result was Ethazyme, a bacterium that creates a mixture of enzymes-through a patent-pending system which degrades the tough cell walls of cellulosic materials into bio-fuel ready sugars in one step, which are then converted into ethanol and other biofuels at a significantly lower cost and with fewer caustic chemicals than current methods.
A Gram-negative, rod-shaped, moderately halophilic bacterium, designated strain YIM 91118T, motile with a single polar flagellum, was isolated from Xinjiang province in north-west China and subjected to a polyphasic taxonomic study. Strain YIM 91118T grew optimally at 37 °C, pH 7.0-8.0 and 10 % NaCl (w/v). Its major cellular fatty acids were iso-C15 : 0, iso-C17 : 0, C16 : 0 and iso-C17 : 1 ω9c. The predominant lipoquinone was Q-8. The DNA G+C content was 63.2 mol%. All of these chemotaxonomic data supported the assignment of the new isolate to the genus Microbulbifer. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YIM 91118T belongs to the genus Microbulbifer and it formed a distinct subclade with Microbulbifer maritimus KCCM 41774T. The levels of 16S rRNA gene sequence similarity to the type strains of Microbulbifer species were in the range 93.5-95.0 %. The mean level of DNA-DNA relatedness between strain YIM 91118T and M. maritimus KCCM 41774T was 45.8 %. On the basis of
ID H5TDX2_9ALTE Unreviewed; 474 AA. AC H5TDX2; DT 18-APR-2012, integrated into UniProtKB/TrEMBL. DT 18-APR-2012, sequence version 1. DT 20-DEC-2017, entry version 39. DE RecName: Full=Chromosomal replication initiator protein DnaA {ECO:0000256,HAMAP-Rule:MF_00377, ECO:0000256,RuleBase:RU000577, ECO:0000256,SAAS:SAAS00724181}; GN Name=dnaA {ECO:0000256,HAMAP-Rule:MF_00377, GN ECO:0000313,EMBL:GAB56499.1}; GN ORFNames=GPUN_2384 {ECO:0000313,EMBL:GAB56499.1}; OS Glaciecola punicea ACAM 611. OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Glaciecola. OX NCBI_TaxID=1121923 {ECO:0000313,EMBL:GAB56499.1, ECO:0000313,Proteomes:UP000053586}; RN [1] {ECO:0000313,EMBL:GAB56499.1, ECO:0000313,Proteomes:UP000053586} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ACAM 611 {ECO:0000313,EMBL:GAB56499.1, RC ECO:0000313,Proteomes:UP000053586}; RX PubMed=22628500; DOI=10.1128/JB.00463-12; RA Qin Q.-L., Xie B.-B., Shu Y.-L., Rong J.-C., Zhao D.-L., Zhang X.-Y., ...
original description Tanaka, N., Romanenko, L.A., Frolova, G.M., and Mikhailov, V.V. 2010. Aestuariibacter litoralis sp. nov., isolated from a sandy sediment of the Sea of Japan. Int. J. Syst. Evol. Microbiol. 60:317-320. [details] ...
Lineage: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter; unclassified ...
Proudly Canadian owned and operated, Bio Agri Mix is a leader in medicated feed additives. For more than 30 years, weve supplied feedmills and producers with the quality products they need to improve animal health. Today we offer the largest range of products in the industry, including:. ...
Here is the best resource for homework help with AGRI 1005 : Science & Society at LSU. Find AGRI1005 study guides, notes, and practice tests from LSU.
Agri Supply has a Satisfaction Guarantee on all of your farm, agriculture, cooking, and outdoor needs, including Yellow Plastic Chain 2. We strive for top notch customer service
Solve Agri Pak provides high quality, productive and effective solutions to the Dairy, Livestock and related agriculture sector of Pakistan and beyond.
Solve Agri Pak provides high quality, productive and effective solutions to the Dairy, Livestock and related agriculture sector of Pakistan and beyond.
Thank you to all who attended Borderway Agri Expo. The combined weight of the three heifers was 2091 kgs - the winner being Ken Pears of Fellside House Farm, Caldbeck, Wigton who guessed 2088 kgs.. ...
VAMNICOMs Management Education offers a two year Post Graduate Diploma in Agri Business Management, designed with classroom teaching component.
Agri Life is participating on BIOFACH 2018 in Nuremberg Germany. Plan your visit to the trade fair and coordinate your appointments.
We provide secure, cost-effective access to the UKs richest collection of digital content: giving you access to the latest data and content from leading international publishers and providers.. Find out more at jisc.ac.uk. ...
Go to January 2013 AgriDigest Index 3. ACROSS BORDERS - Brazil threatens WTO action over BSE-based beef ban 3. Rural groups urge DOJ to scrutinize JBS buying XL plants in US 3. Postpone the US Farm Bill 4. EU Council paves way for lactic acid use in beef 4. Weaker demand in international dairy market slows, not…
22ο Πανελλήνιο Ουρολογικό Συνέδριο 16-19 Οκτωβρίου 2014 Ξενοδοχείο Creta Maris, Χερσόνησος,Ηράκλειο Κρήτης ...
On the basis of phenotypical characteristics and analysis of 16S rRNA sequence, a new species belonging to a new genus is described, and the name Marinobacter hydrocarbonoclasticus is proposed. This organism, isolated from Mediterranean seawater near a petroleum refinery, is a gram-negative, aerobic, rod-shaped bacterium. It grows at NaCl concentrations of 0.08 to 3.5 M and uses various hydrocarbons as the sole source of carbon and energy. Its DNA has a guanine-plus-cytosine content of 52.7 mol%. The 16S rRNA analysis shows a clear affiliation between M. hydrocarbonoclasticus and the gamma group of the phylum Proteobacteria. A close phylogenetic relationship appears among the species Marinomonas vaga, Oceanospirillum linum, Halomonas elongata, and Pseudomonas aeruginosa. Because of the impossibility of finding a single most closely related species, we suggest that this bacterium be assigned to a new genus, at least temporarily. The possibility of a revision of this status when new data appear is,
General Information: Marinobacter aquaeolei VT8, also known as Marinobacter hydrocarbonoclasticus VT8, is a moderately halophilic, hydrocarbon-degrading bacterium isolated from an oil well off the coast of Vietnam. Hydrocarbon-degrading marine bacterium. This organism is a moderately halophilic, hydrocarbon-degrading bacterium which has been isolated from a number of hydrocarbon polluted marine environments. Marinobacter hydrocarbonoclasticus is able to produce biofilms as well as survive in open seawater. ...
Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.
Lineage: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas; Alteromonas ...
Thank you for sharing this Microbiology Resource Announcements article.. NOTE: We request your email address only to inform the recipient that it was you who recommended this article, and that it is not junk mail. We do not retain these email addresses.. ...
Agriculture Water Pipes - Prince Aquafit Agri pipe 180mm (10Kg). We offer pipes from 20mm to 400mm & Fittings from 20mm to 250mm diameter. Enquire now.
Industry body Agri SA says the Department of Agriculture, Land Reform and Rural Developments salary bill should be cut by a higher amount rather than the cuts announced in funding for programmes for food security, land reform, production aid, infrastructure and rural development.
Read more about Rice drives Indias agri exports on Business Standard. EU stockists build inventory ahead of tighter quality norms
Request a Quote & Find a Dealer. The 409 Agri is a highly productive wheel loader with the compact dimensions, performance, versatility, agility and uncompromised productivity youd expect from JCB.
Agri Oxide paint is an extra tough, anti corrosive paint for corrugated ironwork and steel.|br|It is also quick drying and easy to apply.
Farmers cooperative Felleskjøpet Agri BA is the largest cooperative feedmiller in Norway, with about a 50% market share. Amongst others the company operates 15 feed mills across the country and employs around 2,300 people. With 57 grain depots it is also the largest grain collector in Norway. Head office is in Gardemoen, app. 50 km north of Norway's capital Oslo. The pictured feedmill is located in Stange, 1 hour drive north of gardemoen.
Modes of Reproduction Reproduction refers to the process by which living organisms give rise to the offspring of similar kind (species). In crop plants,
The prices of cotton remained stable. The cotton market will have a positive impact of the reconciliation between China and America. The seeds allegedly having the capacity of doing wonders are going to be.... ...
Agriums director of investor relations, Todd Coakwell, said the Calgary-based company is working with the ship owner, Danish Ultrabulk A/S, to get the shipment moving again ...
Blaster Chemical 128-PWS Parts Wash Solvents is an industrial cleaner and degreaser that is for heavy duty cleaning use. Can be used on metals, most plastics or painted surfaces.
It makes sense to provide a feed that boosts immunity in order to ensure safe rearing even in the context of a higher level of infection or stress factors.
Agricultural writers and editors attending the Agricultural Publications Summit will be able... | Article from Agri Marketing July 1, 2001
Editors Note: Dennis L. Erpelding is the manager of government relations, public affairs and... | Article from Agri Marketing June 1, 2002
Nunc accumsan orci ac justo sollicitudin, ullamcorper porttitor nulla vestibulum. Praesent pellentesque, erat vel aliquet vehicula, urna turpis bibendum dui,
Conferenceseries.com organizing Agri, Aqua & Food Conferences in USA, Europe, Australia and other prominent locations across the globe. We organise Agri, Aqua & Food Meetings in the fields related to Aquaculture, Nutrition and Plant Science.
Marine bacterium Catenovulum agarivorans YM01(T) can produce highly thermostable agarases. The draft genome of YM01(T) is about 5.36 Mb and harbors approximately 4,913 genes, including 15 agarase (2 α-agarase and 13 β-agarase)-encoding genes, which will provide references to functional characterization of various agarases from marine bacteria.
ID A0A0D2AGV2_9EURO Unreviewed; 858 AA. AC A0A0D2AGV2; DT 29-APR-2015, integrated into UniProtKB/TrEMBL. DT 29-APR-2015, sequence version 1. DT 07-JUN-2017, entry version 10. DE RecName: Full=V-type proton ATPase subunit a {ECO:0000256,RuleBase:RU361189}; GN ORFNames=PV10_01843 {ECO:0000313,EMBL:KIV98163.1}; OS Exophiala mesophila. OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; OC Exophiala. OX NCBI_TaxID=212818 {ECO:0000313,EMBL:KIV98163.1, ECO:0000313,Proteomes:UP000054302}; RN [1] {ECO:0000313,EMBL:KIV98163.1, ECO:0000313,Proteomes:UP000054302} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=CBS 40295 {ECO:0000313,EMBL:KIV98163.1, RC ECO:0000313,Proteomes:UP000054302}; RG The Broad Institute Genomics Platform; RA Cuomo C., de Hoog S., Gorbushina A., Stielow B., Teixiera M., RA Abouelleil A., Chapman S.B., Priest M., Young S.K., Wortman J., RA Nusbaum C., Birren B.; RT The Genome Sequence of ...
RENUKA AGRI FOODS is exhibiting the product Cocomi Bio Organic Coconut Beverages at BIOFACH 2018 in Nuremberg Germany. Search for further products and novelties.
Prince Agri Products Inc at 52018 Chicory Ln in Granger, IN. Read about, contact, get directions and find other Farm Supplies And Feed. Tel: (574) 277-9218, 5742779218
Having established a leading telecom business in Bharti Airtel, the group aims to build transformational business in the areas of retail, financial services and agriculture, which are future growth engines of India s economy, according to the company. According to Bharti Group, its retail business will enable millions of customers save money and live a better life. It will also benefit farmers, small manufacturers and small artisans across the country through sourcing of products, according to the company. The group s financial services bouquet of life insurance, general insurance and asset management, will contribute to the process of financial inclusion in the country, the company stated in its press release. The agri and food processing business of Bharti will contribute towards the transformation of the agricultural sector and rural economy to a global food basket.. Sunil Bharti Mittal, chairman and Group CEO, Bharti Enterprises said, At Bharti, we have always believed in undertaking ...
CANADA - Agriculture Minister Gerry Ritz today announced an investment of $7.5 million to the Canadian Agri Traceability Services to develop, implement and operate a national livestock traceability data service.
OMAHA, Neb., June 10, 2014 (GLOBE NEWSWIRE) -- Green Plains Inc. (Nasdaq:GPRE) announced today that is has acquired the assets of Supreme Cattle Feeders from Agri Beef Co.
Find Organic Fungus Controller Drive Out at Price 1000 INR/Liter in Moula Ali, Hyderabad. Buy Organic Fungus Controller Drive Out from MYTHREYII AGRI INPUTS with minimum order quantity 10 Ltrs Liter.
Biohazard level, growth media and temperature, gram stain, industrial applications and more information for Idiomarina loihiensis.
Detailed studies on oxidation and reduction of complex polysaccharides were studied. Low molecular weight glucan like dextran has been oxidized using ..
Potassium Ion Meter from Pike Agri-Lab Supplies to test water soluble potassium level in soil. Can also test plant sap to determine K+ uptake in plants.
Close cuddles and sweet smooches with your fur buddy just got better with new Merrick Fresh Kisses, an innovative natural dental treat designed not only to clean dogs teeth but to freshen breath at the same time. While many dental treats effectively reduce plaque and tartar, until now limited options have been availab
Results for milking barn equipment from Abbi-Aerotech, Agpro, AGRI TRAC and other leading brands. Compare and contact a supplier near you on agriculture-xprt.com
UK - According to the latest data from DG Agri, average farm-gate prices for the EU28 are now sitting at 22.96ppl (January 2016), which is 0.56ppl higher than two months before, AHDB DAiry has reported.
Results for cow barn equipment from Abbi-Aerotech, Agpro, AGRI TRAC and other leading brands. Compare and contact a supplier near you on agriculture-xprt.com
Detail waterproofing system with fiber reinforced liquid polyurethane for use on roofs with complex shapes and penetrations. Contact us for free sample.
The swimmers of Primorje Aqua Maris have successfully opened a new competition season with great achievements at the Croatian Free Routines Cup in Split.
... is a genus from the family of Alteromonadaceae. Parte, A.C. "Aliiglaciecola". LPSN. "Aliiglaciecola". www. ...
... is a bacteria genus from the family of Alteromonadaceae. "Paraglaciecola". LPSN. "Paraglaciecola". www.uniprot. ...
... is a bacteria genus from the family of Alteromonadaceae. Up to now there is only one species of this genus known.( ...
... is a bacteria genus from the family of Alteromonadaceae. Parte, A.C. "Bowmanella". LPSN. Kim, Marie; Hwang, Ye-Ji; ...
... is a bacteria genus from the family of Alteromonadaceae. Parte, A.C. "Catenovulum". LPSN. "Catenovulum". www. ...
... is a bacteria genus from the family of Alteromonadaceae. "Salinimonas". LPSN. Cao, J; Lai, Q; Liu, P; Wei, Y; Wang ...
... is a genus of bacteria from the class of Alteromonadaceae. "Arenicella". LPSN. "Arenicella". www.uniprot.org. " ...
... is an aerobic bacteria genus from the family of Alteromonadaceae. LPSN lpsn.dsmz.de UniProt editors, Don J. Brenner ...
... is a Gram-negative, aerobic and motile bacteria genus from the family of Alteromonadaceae with one known ... nov., a new member of the family Alteromonadaceae isolated from seawater". International Journal of Systematic and Evolutionary ...
... is a Gram-negative, facultatively aerobic and motile bacteria genus from the family of Alteromonadaceae with one ... nov., a member of the family Alteromonadaceae isolated from a salt lake". International Journal of Systematic and Evolutionary ...
The genus Alishewanella is one of the major branches of the family Alteromonadaceae. It was proposed to accommodate A. fetalis ...
... is a Gram-negative, halotolerant and rod-shaped bacteria genus from the family of Alteromonadaceae with one ... nov., a halotolerant gammaproteobacterium within the family Alteromonadaceae, isolated from a salt pan in Tamilnadu, India". ...
... emendation of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ...
... emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ... emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ...
"Phylogenetic relationships among marine Alteromonas-like proteobacteria: emended description of the family Alteromonadaceae and ...
... is a Gram-negative genus of bacteria from the class of Alteromonadaceae with one known species (Alkalimarinus ...
Although they have been treated as a single family, the Alteromonadaceae, they were divided into eight by Ivanova et al. in ... emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ...
They share many traits with the sister genus Alteromonas, the type genus of the family (Alteromonadaceae) and order ( ...
... is a Gram-negative, aerobic and motile bacteria genus from the family of Alteromonadaceae with one known species ( ...
... is a Gram-negative, strictly aerobic and rod-shaped bacteria genus from the family of Alteromonadaceae with ...
The bacterial colonies associated with TEPs tend to be dominated by Alteromonadaceae, specifically taxonomic units previously ...
... rod-shaped and motile bacteria genus from the family of Alteromonadaceae with one known species (Planctobacterium marinum). ...
... is a Gram-negative, aerobic, rod-shaped and non-motile bacteria genus from the family of Alteromonadaceae with one ...
Pseudomonas Achromobacter Roseobacter Flavobacteraceae Alteromonadaceae Athrospira plantensis Terrimonas rubra C.vulgaris ...
... alteromonadaceae MeSH B03.660.250.021.020 - Alteromonas MeSH B03.660.250.021.500 - Moritella MeSH B03.660.250.021.600 - ...
... LPSN - List of Prokaryotic names with Standing in Nomenclature "Taxonomy browser (Alteromonadaceae)". Bethesda ... The Alteromonadaceae are a family of Proteobacteria. They are now one of several families in the order Alteromonadales, ... emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ...
Alteromonadaceae LPSN - List of Prokaryotic names with Standing in Nomenclature "Taxonomy browser (Alteromonadaceae)". Bethesda ... The Alteromonadaceae are a family of Proteobacteria. They are now one of several families in the order Alteromonadales, ... emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., ...
Family Alteromonadaceae. Warning: In the List of Prokaryotic names with Standing in Nomenclature, an arrow (→) only indicates ... Alteromonadaceae Ivanova and Mikhailov 2001 emend. Ivanova et al. 2004. Type genus: ¤ Alteromonas Baumann et al. 1972 (Approved ... n. Alteromonadaceae, the Alteromonas family. Valid publication: Validation List no. 81. Int. J. Syst. Evol. Microbiol., 2001, ... Alteromonadaceae Ivanova and Mikhailov 2001, fam. nov. Type genus: ¤ Alteromonas Baumann et al. 1972 (Approved Lists 1980). ...
Alteromonadaceae / genetics* * Alteromonadaceae / metabolism * Bacterial Proteins / genetics* * Bacterial Proteins / metabolism ...
Alteromonadaceae bacterium. 802. UniRef50_B3PEE6. Glycosyl hydrolase. Microbulbifer thermotolerans. 812. Alpha-glucosidase. ...
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Saccharophagus. OX NCBI_TaxID=203122; ...
p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.,/p> ,p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.,/p> ,p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).,/p> ,p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x,sup>64,/sup> + x,sup>4,/sup> + x,sup>3,/sup> + x + 1. The algorithm is described in the ISO 3309 standard. ,/p> ,p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.,br /> ,strong>Cyclic redundancy and other checksums,/strong>,br /> ,a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993),/a>),/p> Checksum:i ...
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Agarivorans. OX NCBI_TaxID=1331007 {ECO ...
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; OC Alteromonadaceae; Marinobacter. OX NCBI_TaxID=430453 {ECO ...
Uncurated}} =Classification= Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; ...
A new family, Alteromonadaceae far. nov., including marine proteobacteria of the genera Alteromonas, Pseudoalteromonas, ... Alteromonadaceae Marine F2 ([gamma]-proteobacteria) environments, sediments, deep-sea vents, marine invertebrates MV-W, L, ... including Alteromonadaceae, Pseudomonadaceae, Sphingomonadaceae, and Vibrionaceae as well as Cytopha-gaceae and ... Alteromon-adaceae (Alteromonas, Pseudoalteromonas), Pseudomon-adaceae (Pseudomonas), Rhodobacteraceae (Roseobacter), and ...
Five of these bacteria (Alteromonadaceae spp.; Krishna et al., 2011), Stenotrophomonas spp. (Moore et al., 1997; Kumar et al., ...
Aliiglaciecola is a genus from the family of Alteromonadaceae. Parte, A.C. "Aliiglaciecola". LPSN. "Aliiglaciecola". www. ...
original description Tanaka, N., Romanenko, L.A., Frolova, G.M., and Mikhailov, V.V. 2010. Aestuariibacter litoralis sp. nov., isolated from a sandy sediment of the Sea of Japan. Int. J. Syst. Evol. Microbiol. 60:317-320. [details] ...
Lineage: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas; ...
Alteromonadaceae. - Pseudoalteromonadaceae. - Shewanellaceae. - Moritellaceae. - Idiomarinaceae. - Marinicella. - Colwelliaceae ...
In addition to Pseudomonadaceae, clone sequences affiliated with Moraxellaceae, Enterobacteriaceae, Alteromonadaceae, and ... Alteromonadaceae, and Xanthomonadaceae. Also, 17 (10.9%) of the total clones were Betaproteobacteria, and most were associated ...
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Hydrocarboniclastica. Data source. GenBank ( ...
Alteromonadaceae) have been highlighted (legend). Organisms where streamlining is driven by nutrient-limitation, such as SAR11 ...
... of exopolysaccharides produced by three moderately halophilic bacteria belonging to the family Alteromonadaceae, ...
Alteromonadaceae bacterium. PH39 (AF513471).. The strain was confirmed as S. haliotis. by using additional biochemical tests ... Alteromonadaceae. and proposal of Pseudoalteromonadaceae. fam. nov., Colwelliaceae. fam. nov., Shewanellaceae. fam. nov., ...
Alteromonadaceae, Rhodobacteraceae, and unclassified families of the order Flavobacteriales and the class Gammaproteobacteria ... and were members of the most abundant family Alteromonadaceae in aposymbiotic and symbiotic anemones (Table 3, Supplementary ... aposymbiotic Aiptasia were overall dominated by Alteromonadaceae (between 29% and 52%, mean 47%), Rhodobacteraceae (between 6% ... but contained noticeably less Alteromonadaceae (between 16% and 23%, mean 19%). By comparison, water samples were markedly ...
Alteromonadaceae. 0.71. 0.63. 0.85. 0.75. 1.20. Shewanellaceae. 0.68. 0.65. 0.11. 0.11. 5.99 ...
On the basis of this work and previous polyphasic taxonomic studies, the circumscription of the family Alteromonadaceae is ... Phylogenetic Relationships Among Marine Alteromonas-like Proteobacteria: Emended Description of the Family Alteromonadaceae and ...
The other main cluster of γ-Proteobacteria that was detected in the Sørfjord was the Alteromonadaceae. ...
TARA_PSW_MAG_00129,28108,found,species,Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Alteromonadaceae;Alteromonas ...
The genus Marinobacterium belongs to the family Alteromonadaceae within the class Gammaproteobacteria and was reported in 1997 ...
... of exopolysaccharides produced by three moderately halophilic bacteria belonging to the family Alteromonadaceae. J Appl ...
... one was a member of the Alteromonadaceae (DG1561), three were members of Alphaproteobacteria belonging to Maritimibacter of the ...
... sequence similarity to species of the families Oceanospirillaceae and Alteromonadaceae. The polar lipid profile of the novel ...
  • The Alteromonadaceae are a family of Proteobacteria. (wikipedia.org)
  • Springer, New York, 2005, Volume 2: The Proteobacteria, Part B: The Gammaproteobacteria Elena P. Ivanova, Sébastien Flavier and Richard Christen: "Phylogenetic relationships among marine Alteromonas-like proteobacteria: emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. (wikipedia.org)
  • IVANOVA (E.P.), FLAVIER (S.) and CHRISTEN (R.): Phylogenetic relationships among marine Alteromonas -like proteobacteria: emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. (bacterio.net)
  • 4]]] Furthermore, an analysis of 16S rRNA sequence indicates that ''M. hydrocarbonoclasticus '' belongs to the gamma-type [http://en.wikipedia.org/wiki/Proteobacteria Proteobacteria] and is distinctive from bacteria with similar morphological and biochemical properties. (kenyon.edu)
  • An initial bloom of bacteria affiliated to the Alteromonadaceae could not be assigned to any specific treatment and was interpreted as a response to the manipulations during mesocosm set-up. (univ-amu.fr)
  • Phylogenetic analyses demonstrated that strain G7 T formed a distinct monophyletic clade closely related to species of the family Alteromonadaceae in the Alteromonas -like Gammaproteobacteria. (kpubs.org)
  • Alteromonadaceae , the Alteromonas family. (bacterio.net)
  • F10 belonging to the marine Roseobacter group and an Alteromonas macleodii F12 belonging to Alteromonadaceae, from the microbial community of the ubiquitous diatom Asterionellopsis glacialis. (nyu.edu)
  • Aliiglaciecola is a genus from the family of Alteromonadaceae. (wikipedia.org)
  • Because of the great potential for the bacterium to be used as a bioresource for bioconversion of algal polysaccharides, we used a polyphasic taxonomic approach for the classification of strain G7 T . This report describes the characteristics of the G7 T strain as a novel genus of the family Alteromonadaceae. (kpubs.org)
  • Phylogenetic trees based on the 16S rRNA gene sequence placed strain UST090418-1611(T) in the family Alteromonadaceae with the closest relationship to the genus Marinobacter. (edu.sa)
  • Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain HJR7 T belongs to the genus Marinobacter in the family Alteromonadaceae . (microbiologyresearch.org)
  • Streamlined (SAR11, Prochlorococcus , symbionts) and non-streamlined important marine taxa ( Vibrionaceae , Rhodobacteraceae, Alteromonadaceae ) have been highlighted (legend). (nih.gov)
  • The persistence of Alteromonadaceae in the microbial assemblages was significantly favored by the presence of additional glucose. (univ-amu.fr)
  • 93 % sequence similarity to species of the families Oceanospirillaceae and Alteromonadaceae. (nih.gov)
  • IVANOVA (E.P.) and MIKHAILOV (V.V.): A new family, Alteromonadaceae fam. (bacterio.net)
  • nov., a halotolerant gammaproteobacterium within the family Alteromonadaceae , isolated from a salt pan in Tamilnadu, India. (ac.ir)
  • Allers E, Gomez-Consarnau L, Pinhassi J, Gasol JM, Simek K, Pernthaler J (2007) Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. (univ-amu.fr)
  • Bacterial families which were present in two tissues with biofilms were Alteromonadaceae, Propionibacteriaceae, Streptomycetaceae, Streptococcaceae , Enterobacteriaceae, Comamonadaceae, and Flavobacteriaceae and may thus be interesting candidates for further analysis as initiators of chronic wound infection in dogs. (thefreedictionary.com)
  • 16S rRNA gene amplicon sequencing detected a higher abundance of Gammaproteobacteria and Alphaproteobacteria bacteria such as taxonomic families Idiomarinaceae, Alcanivoraceae, and Alteromonadaceae in response to lignin. (escholarship.org)
  • 2007. Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms . (jcu.cz)