OrganismsChemicals and DrugsInformation Science
AcidaminococcusVeillonellaceaeCoenzyme A-TransferasesAconitic AcidGram-Negative Anaerobic BacteriaGram-Negative Anaerobic CocciGlutaratesVeillonellaBacteria, AnaerobicHydro-LyasesCarboxy-LyasesBiotinClostridiumMolecular Sequence Data
Acidaminococcus
A genus of gram-negative bacteria in the family ACIDAMINOCOCCACEAE, isolated from the INTESTINES of PIGS and humans.
Veillonellaceae
A family of gram-negative bacteria, in the phylum FIRMICUTES.
Coenzyme A-Transferases
Enzymes which transfer coenzyme A moieties from acyl- or acetyl-CoA to various carboxylic acceptors forming a thiol ester. Enzymes in this group are instrumental in ketone body metabolism and utilization of acetoacetate in mitochondria. EC 2.8.3.
Aconitic Acid
Gram-Negative Anaerobic Bacteria
A large group of anaerobic bacteria which show up as pink (negative) when treated by the Gram-staining method.
Gram-Negative Anaerobic Cocci
A group of anaerobic coccoid bacteria that show up as pink (negative) when treated by the gram-staining method.
Glutarates
Veillonella
A genus of gram-negative, anaerobic cocci parasitic in the mouth and in the intestinal and respiratory tracts of man and other animals.
Bacteria, Anaerobic
Hydro-Lyases
Enzymes that catalyze the breakage of a carbon-oxygen bond leading to unsaturated products via the removal of water. EC 4.2.1.
Carboxy-Lyases
Enzymes that catalyze the addition of a carboxyl group to a compound (carboxylases) or the removal of a carboxyl group from a compound (decarboxylases). EC 4.1.1.
Biotin
A water-soluble, enzyme co-factor present in minute amounts in every living cell. It occurs mainly bound to proteins or polypeptides and is abundant in liver, kidney, pancreas, yeast, and milk.
Clostridium
A genus of motile or nonmotile gram-positive bacteria of the family Clostridiaceae. Many species have been identified with some being pathogenic. They occur in water, soil, and in the intestinal tract of humans and lower animals.
Molecular Sequence Data
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.

Structural basis for stereo-specific catalysis in NAD(+)-dependent (R)-2-hydroxyglutarate dehydrogenase from Acidaminococcus fermentans. (1/5)

NAD(+)-dependent (R)-2-hydroxyglutarate dehydrogenase (HGDH) catalyses the reduction of 2-oxoglutarate to (R)-2-hydroxyglutarate and belongs to the d-2-hydroxyacid NAD(+)-dependent dehydrogenase (d-2-hydroxyacid dehydrogenase) protein family. Its crystal structure was determined by phase combination to 1.98 A resolution. Structure-function relationships obtained by the comparison of HGDH with other members of the d-2-hydroxyacid dehydrogenase family give a chemically satisfying view of the substrate stereoselectivity and catalytic requirements for the hydride transfer reaction. A model for substrate recognition and turnover is discussed. The HGDH active site architecture is structurally optimized to recognize and bind the negatively charged substrate 2-oxoglutarate. The structural position of the side chain of Arg52, and its counterparts in other family members, strongly correlates with substrate specificity towards substitutions at the C3 atom (linear or branched substrates). Arg235 interacts with the substrate's alpha-carboxylate and carbonyl groups, having a dual role in both substrate binding and activation, and the gamma-carboxylate group can dock at an arginine cluster. The proton-relay system built up by Glu264 and His297 permits His297 to act as acid-base catalyst and the 4Re-hydrogen from NADH is transferred as hydride to the carbonyl group Si-face leading to the formation of the correct enantiomer (R)-2-hydroxyglutarate.  (+info)

Acidaminococcus intestini sp. nov., isolated from human clinical samples. (2/5)

Eleven strains of a hitherto unknown, Gram-negative, anaerobic coccus were recovered from various human clinical samples of patients hospitalized in two geographically distant French hospitals. These strains displayed the morphology and growth characteristics of those related to the genus Acidaminococcus. The clinical isolates shared at least 99.9 and 99.7 % of their nucleotide positions in the 16S and 23S rRNA gene sequences, respectively. They displayed 95.6 and 88.9 % 16S and 23S rRNA gene sequence similarities, respectively, with Acidaminococcus fermentans. The 16S rRNA-based phylogeny revealed that all the clinical isolates grouped in a statistically well supported cluster separate from A. fermentans. Enzymic activity profiles as well as metabolic end product patterns, including propionic acid production, differentiated the novel bacteria from A. fermentans. Finally, phenotypic, genotypic and phylogenetic data, including large-scale chromosome structure and DNA G+C content, supported the proposal of a novel species of the genus Acidaminococcus, for which the name Acidaminococcus intestini sp. nov. is proposed. The type strain is ADV 255.99(T) (=AIP 283.01(T)=CIP 108586(T)=CCUG 50930(T)).  (+info)

Spectroscopic evidence for an all-ferrous [4Fe-4S]0 cluster in the superreduced activator of 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus fermentans. (3/5)

 (+info)

An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases. (4/5)

 (+info)

Complete genome sequence of Acidaminococcus intestini RYC-MR95, a Gram-negative bacterium from the phylum Firmicutes. (5/5)

 (+info)

UniProt/TrEMBL: G4Q3V8 ACIIR
ID G4Q3V8_ACIIR Unreviewed; 381 AA. AC G4Q3V8; DT 14-DEC-2011, integrated into UniProtKB/TrEMBL. DT 14-DEC-2011, sequence version 1. DT 27-SEP-2017, entry version 44. DE RecName: Full=Alanine racemase {ECO:0000256,HAMAP-Rule:MF_01201}; DE EC=5.1.1.1 {ECO:0000256,HAMAP-Rule:MF_01201}; GN Name=alr {ECO:0000313,EMBL:AEQ23024.1}; GN OrderedLocusNames=Acin_1813 {ECO:0000313,EMBL:AEQ23024.1}; OS Acidaminococcus intestini (strain RyC-MR95). OC Bacteria; Firmicutes; Negativicutes; Acidaminococcales; OC Acidaminococcaceae; Acidaminococcus. OX NCBI_TaxID=568816 {ECO:0000313,EMBL:AEQ23024.1, ECO:0000313,Proteomes:UP000007093}; RN [1] {ECO:0000313,EMBL:AEQ23024.1, ECO:0000313,Proteomes:UP000007093} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=RyC-MR95 {ECO:0000313,EMBL:AEQ23024.1, RC ECO:0000313,Proteomes:UP000007093}; RX PubMed=22123762; DOI=10.1128/JB.06301-11; RA DAuria G., Galan J.C., Rodriguez-Alcayna M., Moya A., Baquero F., RA Latorre A.; RT Complete genome sequence of ...
http://www.genome.jp/dbget-bin/www_bget?tr:G4Q3V8_ACIIR
Nomenclatural changes validly published (or published) in the 2007 issues of the IJSEMNomenclatural changes validly published (or published) in the 2007 issues of the IJSEM
Acetobacter ghanensis Cleenwerck et al. 2007, sp. nov. (Part 7) Acetobacter senegalensis Ndoye et al. 2007, sp. nov. (Part 7) Acidaminococcus Rogosa 1969 emend. Jumas-Bilak et al. 2007. (Part 10) Acidaminococcus intestini Jumas-Bilak et al. 2007, sp. nov. (Part 10) Acidianus Segerer et al. 1986 emend. Plumb et al. 2007. (Part 7) Acidianus sulfidivorans Plumb et al. 2007, sp. nov. (Part 7) Actinobacillus capsulatus Arseculeratne 1962 (Approved Lists 1980) emend. Kuhnert et al. 2007. (Part 3) Actinocatenispora sera Matsumoto et al. 2007, sp. nov. (Part 11) Actinocorallia aurea Tamura et al. 2007, sp. nov. (Part 9) Actinomadura alba Wang et al. 2007, sp. nov. (Part 8) Actinomadura rudentiformis Le Roes and Meyers 2007, sp. nov. (Part 1) Actinoplanes couchii Kämpfer et al. 2007, sp. nov. (Part 4) Actinotalea Yi et al. 2007, gen. nov. (Part 1) Actinotalea fermentans (Bagnara et al. 1985) Yi et al. 2007, comb. nov. - Basonym: Cellulomonas fermentans Bagnara et al. 1985. (Part 1) Aerococcus suis Vela ...
http://www.bacterio.net/-changes-2007.html
UniProt: R7K8X6 9FIRM
ID R7K8X6_9FIRM Unreviewed; 457 AA. AC R7K8X6; DT 24-JUL-2013, integrated into UniProtKB/TrEMBL. DT 24-JUL-2013, sequence version 1. DT 25-OCT-2017, entry version 31. DE RecName: Full=Chromosomal replication initiator protein DnaA {ECO:0000256,HAMAP-Rule:MF_00377, ECO:0000256,RuleBase:RU000577, ECO:0000256,SAAS:SAAS00724181}; GN Name=dnaA {ECO:0000256,HAMAP-Rule:MF_00377}; GN ORFNames=BN810_01090 {ECO:0000313,EMBL:CDE72261.1}; OS Acidaminococcus sp. CAG:917. OC Bacteria; Firmicutes; Negativicutes; Acidaminococcales; OC Acidaminococcaceae; Acidaminococcus; environmental samples. OX NCBI_TaxID=1262688 {ECO:0000313,EMBL:CDE72261.1, ECO:0000313,Proteomes:UP000018048}; RN [1] {ECO:0000313,EMBL:CDE72261.1, ECO:0000313,Proteomes:UP000018048} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=MGS:917 {ECO:0000313,Proteomes:UP000018048}; RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., RA Sunagawa S., Plichta D., Gautier L., Le Chatelier E., Peletier E., RA Bonde I., Nielsen T., ...
http://www.genome.jp/dbget-bin/www_bget?uniprot:R7K8X6_9FIRM
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Glandulae intestini crassi | definition of glandulae intestini crassi by Medical dictionaryGlandulae intestini crassi | definition of glandulae intestini crassi by Medical dictionary
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RCSB PDB - 1POI: CRYSTAL STRUCTURE OF GLUTACONATE COENZYME A-TRANSFERASE FROM ACIDAMINOCOCCUS FERMENTANS TO 2.55...RCSB PDB - 1POI: CRYSTAL STRUCTURE OF GLUTACONATE COENZYME A-TRANSFERASE FROM ACIDAMINOCOCCUS FERMENTANS TO 2.55...
1POI: Glutaconate CoA-transferase from Acidaminococcus fermentans: the crystal structure reveals homology with other CoA-transferases.
http://www.rcsb.org/pdb/explore/litView.do?structureId=1POI
Wilson Audio Specialties Alexandria XLF loudspeaker | Stereophile.comWilson Audio Specialties Alexandria XLF loudspeaker | Stereophile.com
The Wilson Audio Specialties Alexandra XLF costs $200,000/pair. So does a Ferrari. Perhaps if Wilson Audio Specialties sold as many pairs of XLFs as Ferrari sells cars, the price might drop. For now, $200,000 is what you pay. Can a loudspeaker possibly be worth that much? Add $10,000 for speaker cables, and thats what I paid for my first home in 1992. Today, the average American home costs around $272,000, which is likely less than the cost of an audio system built around a pair of Alexandra XLFs.
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Wilson Audio Specialties Alexandria XLF loudspeaker | Stereophile.comWilson Audio Specialties Alexandria XLF loudspeaker | Stereophile.com
The Wilson Audio Specialties Alexandra XLF costs $200,000/pair. So does a Ferrari. Perhaps if Wilson Audio Specialties sold as many pairs of XLFs as Ferrari sells cars, the price might drop. For now, $200,000 is what you pay. Can a loudspeaker possibly be worth that much? Add $10,000 for speaker cables, and thats what I paid for my first home in 1992. Today, the average American home costs around $272,000, which is likely less than the cost of an audio system built around a pair of Alexandra XLFs.
https://www.stereophile.com/comment/534256
Ottawa | national capital, Canada | Britannica.comOttawa | national capital, Canada | Britannica.com
Ottawa: City, capital of Canada, located in southeastern Ontario. In the eastern extreme of the province, Ottawa is situated on the south bank of the Ottawa River across from Gatineau,...
https://www.britannica.com/place/Ottawa
Evaluation of the detection of Mycobacterium tuberculosis with metabolic activity in culture-negative human clinical samplesEvaluation of the detection of Mycobacterium tuberculosis with metabolic activity in culture-negative human clinical samples
A free platform for explaining your research in plain language, and managing how you communicate around it - so you can understand how best to increase its impact.
https://www.growkudos.com/publications/10.1111%25252Fj.1469-0691.2012.03779.x/reader
Seralab - The complete resource for all biologicalsSeralab - The complete resource for all biologicals
BioreclamationIVT is the complete resource for all biologicals including human clinical samples, hepatocytes, subcellular fractions and biological matrices.
http://www.seralab.co.uk/?option=com_virtuemart&page=shop.browse&category_id=3&Itemid=42
Seralab - The complete resource for all biologicalsSeralab - The complete resource for all biologicals
BioreclamationIVT is the complete resource for all biologicals including human clinical samples, hepatocytes, subcellular fractions and biological matrices.
http://www.seralab.co.uk/?option=com_virtuemart&page=shop.browse&category_id=7&Itemid=42
សារពាង្គកាយ - វិគីភីឌាសារពាង្គកាយ - វិគីភីឌា
ទីតាំងជាទូទៅនៃការទទួលយកបានភាគច្រើនជា root នៃ មែកធាងនៃជីវិត គឺរវាង monophyletic ដែន បាក់តេរី និង clade បានបង្កើតឡើងដោយ អាកឃី និង ការី នៃអ្វីដែលត្រូវបានសំដៅដល់ថាជា«ដើមឈើប្រពៃណីនៃជីវិត ដោយផ្អែកលើការសិក្សាម៉ូលេគុលជាច្រើន។ [៣៩] [៤០] [៤១] [៤២] [៤៣] [៤៤] មួយជនជាតិភាគតិចតូចណាស់នៃការសិក្សាបានសន្និដ្ឋានខុសគ្នាគឺថាជា root គឺស្ថិតនៅក្នុងបាក់តេរីដែនទាំងនៅក្នុង phylum នេះ Firmicutes [៤៥] ឬថា phylum នេះ Chloroflexi គឺ ...
https://km.m.wikipedia.org/wiki/%E1%9E%9F%E1%9E%B6%E1%9E%9A%E1%9E%96%E1%9E%B6%E1%9E%84%E1%9F%92%E1%9E%82%E1%9E%80%E1%9E%B6%E1%9E%99
Human Metabolome Database: HMDB0001290 (Glutaconyl-CoA) Protein AssociationsHuman Metabolome Database: HMDB0001290 (Glutaconyl-CoA) Protein Associations
This project is supported by the Canadian Institutes of Health Research, Canada Foundation for Innovation, and by The Metabolomics Innovation Centre (TMIC), a nationally-funded research and core facility that supports a wide range of cutting-edge metabolomic studies. TMIC is funded by Genome Canada, Genome Alberta, and Genome British Columbia, a not-for-profit organization that is leading Canadas national genomics strategy with $900 million in funding from the federal government ...
https://hmdb.ca/metabolites/HMDB0001290/metabolite_protein_links?c=gene_name&d=down
Human Metabolome Database: HMDB0001290 (Glutaconyl-CoA) Protein AssociationsHuman Metabolome Database: HMDB0001290 (Glutaconyl-CoA) Protein Associations
This project is supported by the Canadian Institutes of Health Research, Canada Foundation for Innovation, and by The Metabolomics Innovation Centre (TMIC), a nationally-funded research and core facility that supports a wide range of cutting-edge metabolomic studies. TMIC is funded by Genome Canada, Genome Alberta, and Genome British Columbia, a not-for-profit organization that is leading Canadas national genomics strategy with $900 million in funding from the federal government ...
https://hmdb.ca/metabolites/HMDB0001290/metabolite_protein_links?c=protein_type&d=down
Bergeys Manual® of Systematic Bacteriology | Springer for Research & DevelopmentBergeys Manual® of Systematic Bacteriology | Springer for Research & Development
Includes a revised taxonomic outline for the Firmicutes based upon the SILVA project as well as a description of more than 1346 species and 235 genera belonging to the phylum Firmicutes, which are als
https://rd.springer.com/book/10.1007/978-0-387-68489-5
we quickly defend ourselves | MidTown Hotel Huewe quickly defend ourselves | MidTown Hotel Hue
Officials have been retracing Spencers steps and interactions to determine if others may have been exposed. Ebola is only transmittable when the carrier of the virus is experiencing symptoms. Were to be quarantined and monitored. Moreover, if we are compared to others, we quickly defend ourselves, saying, Why cant you accept me for who I am. Then who are we to force monkeys to behave like human children. Let monkeys be monkeys!. cheap air jordans. The company says that it has opened a new state of the art disaster recovery site in Atlanta, and has upgraded all production and backup servers to the IBM POWER6.In its recent press release, RMI adds that over 400 of its customers were migrated to the new systems with minimal downtime, and a new disaster recovery data center was opened to provide total redundancy for all production systems.In addition to installing redundant POWER6 servers to mirror the production site, RMI says it installed an 80 KVA UPS and 200 KW natural gas powered generator ...
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A comparative study of short- and long-TE <sup>1</sup>H MRS at 3 T for in vivo detection of 2-hydroxyglutarate in brain...A comparative study of short- and long-TE <sup>1</sup>H MRS at 3 T for in vivo detection of 2-hydroxyglutarate in brain...
TY - JOUR. T1 - A comparative study of short- and long-TE 1H MRS at 3 T for in vivo detection of 2-hydroxyglutarate in brain tumors. AU - Choi, Changho. AU - Ganji, Sandeep. AU - Hulsey, Keith. AU - Madan, Akshay. AU - Kovacs, Zoltan. AU - Dimitrov, Ivan. AU - Zhang, Song. AU - Pichumani, Kumar. AU - Mendelsohn, Dianne. AU - Mickey, Bruce. AU - Malloy, Craig. AU - Bachoo, Robert. AU - Deberardinis, Ralph. AU - Maher, Elizabeth. PY - 2013/10. Y1 - 2013/10. N2 - 2-Hydroxyglutarate (2HG) is produced in gliomas with mutations of isocitrate dehydrogenase (IDH) 1 and 2. The 1H resonances of the J-coupled spins of 2HG are extensively overlapped with signals from other metabolites. Here, we report a comparative study at 3 T of the utility of the point-resolved spectroscopy sequence with a standard short TE (35 ms) and a long TE (97 ms), which had been theoretically designed for the detection of the 2HG 2.25-ppm resonance. The performance of the methods is evaluated using data from phantoms, seven ...
https://scholars.houstonmethodist.org/en/publications/a-comparative-study-of-short-and-long-te-sup1suph-mrs-at-3-t-for-
AcidaminococcusAcidaminococcus
... is a genus in the phylum Bacillota (Bacteria), whose members are anaerobic diplococci that can use amino acids ... The name Acidaminococcus derives from: New Latin noun acidum (from Latin adjective acidus, sour), an acid; New Latin adjective ... "Acidaminococcus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09. Sayers; et al. " ... "Acidaminococcus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09. "The LTP". ...
https://en.wikipedia.org/wiki/Acidaminococcus
Glutaconate CoA-transferaseGlutaconate CoA-transferase
Buckel W, Dorn U, Semmler R (1981). "Glutaconate CoA-transferase from Acidaminococcus fermentans". Eur. J. Biochem. 118 (2): ...
https://en.wikipedia.org/wiki/Glutaconate_CoA-transferase
Cas12aCas12a
Two candidate enzymes from Acidaminococcus and Lachnospiraceae display efficient genome-editing activity in human cells. A ...
https://en.wikipedia.org/wiki/Cas12a
DeinococcotaDeinococcota
Campbell C, Sutcliffe IC, Gupta RS (2014). "Comparative proteome analysis of Acidaminococcus intestini supports a relationship ...
https://en.wikipedia.org/wiki/Deinococcota
ChloroflexiaChloroflexia
Campbell C, Sutcliffe IC, Gupta RS (2014). "Comparative proteome analysis of Acidaminococcus intestini supports a relationship ...
https://en.wikipedia.org/wiki/Chloroflexia
NegativicutesNegativicutes
Campbell C, Sutcliffe IC, Gupta RS (2014). "Comparative proteome analysis of Acidaminococcus intestini supports a relationship ...
https://en.wikipedia.org/wiki/Negativicutes
FerredoxinFerredoxin
... cluster-containing ferredoxin as an alternative electron donor for 2-hydroxyglutaryl-CoA dehydratase from Acidaminococcus ...
https://en.wikipedia.org/wiki/Ferredoxin
Sodium-transporting carboxylic acid decarboxylaseSodium-transporting carboxylic acid decarboxylase
The high resolution crystal structure of the α-subunit of the glutaconyl-CoA decarboxylase (Gcdα) of Acidaminococcus fermentans ... "The sodium ion translocating glutaconyl-CoA decarboxylase from Acidaminococcus fermentans: cloning and function of the genes ...
https://en.wikipedia.org/wiki/Sodium-transporting_carboxylic_acid_decarboxylase
Grass tetanyGrass tetany
Ability of Acidaminococcus fermentans to oxidize trans-aconitate and decrease the accumulation of tricarballylate, a toxic end ...
https://en.wikipedia.org/wiki/Grass_tetany
Butyryl-CoAButyryl-CoA
... of Acidaminococcus fermentans". The Journal of Biological Chemistry. 289 (8): 5145-5157. doi:10.1074/jbc.M113.521013. PMC ...
https://en.wikipedia.org/wiki/Butyryl-CoA
SyntrophySyntrophy
Amino acid fermenting anaerobes such as Clostridium species, Peptostreptococcus asacchaarolyticus, Acidaminococcus fermentans ...
https://en.wikipedia.org/wiki/Syntrophy
List of MeSH codes (B03)List of MeSH codes (B03)
Acidaminococcus MeSH B03.440.425.410.096.755 - Pectinatus MeSH B03.440.425.410.096.877 - Selenomonas MeSH B03.440.425.410. ...
https://en.wikipedia.org/wiki/List_of_MeSH_codes_(B03)
Complete genome sequence of acidaminococcus fermentans type strain (VR4 <sup>T<...
Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococ-cus, and is of phylogenetic interest ... abstract = "Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococ-cus, and is of phylogenetic ... N2 - Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococ-cus, and is of phylogenetic ... AB - Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococ-cus, and is of phylogenetic ...
https://ucdavis.pure.elsevier.com/en/publications/complete-genome-sequence-of-acidaminococcus-fermentans-type-strai
Fecal Microbiota Transplant in Children With and Without IBDFecal Microbiota Transplant in Children With and Without IBD
Does fecal microbiota transplant provide sustained C. difficile eradication in children with and without IBD?
https://www.medscape.com/viewarticle/850311
Gut Reaction: Environmental Effects on the Human Microbiota | Environmental Health Perspectives | Vol. 117, No. 5Gut Reaction: Environmental Effects on the Human Microbiota | Environmental Health Perspectives | Vol. 117, No. 5
Environmental Health Perspectives is an Open Access journal published by the National Institute of Environmental Health Sciences.
https://ehp.niehs.nih.gov/doi/full/10.1289/ehp.117-a198
Kinetic Basis for DNA Target Specificity of CRISPR-Cas12aKinetic Basis for DNA Target Specificity of CRISPR-Cas12a
Here, we use quantitative kinetics to dissect the reaction steps of DNA targeting by Acidaminococcus sp Cas12a (also known as ...
https://pubmed.ncbi.nlm.nih.gov/30078724/
The semiquinone swing in the bifurcating electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium...The semiquinone swing in the bifurcating electron transferring flavoprotein/butyryl-CoA dehydrogenase complex from Clostridium...
Superimposing Acidaminococcus fermentans EtfAB onto C. difficile EtfAB/Bcd reveals a rotation of domain II of nearly 80°. ... Rapid kinetics reveal surprising flavin chemistry in bifurcating electron transfer flavoprotein from Acidaminococcus fermentans ... of Acidaminococcus fermentans. Chowdhury NP, Mowafy AM, Demmer JK, Upadhyay V, Koelzer S, Jayamani E, Kahnt J, Hornung M, ...
http://www.ncbi.nlm.nih.gov/pubmed/29146947
Enterococcus timonensis sp. nov., Actinomyces marseillensis sp. nov., Leptotrichia massiliensis sp. nov., Actinomyces...'Enterococcus timonensis' sp. nov., 'Actinomyces marseillensis' sp. nov., 'Leptotrichia massiliensis' sp. nov., 'Actinomyces...
Acidaminococcus timonensis sp. nov. and Acidaminococcus massiliensis sp. nov. isolated from human gut. Ricaboni D, Mailhe M ...
https://pubmed.ncbi.nlm.nih.gov/29556407
Startseite | Max-Planck-Institut für BiochemieStartseite | Max-Planck-Institut für Biochemie
2-hydroxyglutarate dehydrogenase from Acidaminococcus fermentans. FEBS Journal 272 (1), S. 269 - 281 (2005) ...
https://www.biochem.mpg.de/publication-search/2247?deactivate_global_blacklist=false&page=1&person=%2Fpersons%2Fresource%2Fpersons78362
Publication Detail
The positive associations of the genus Acidaminococcus with BMI, as well as waist and hip circumferences, were stronger in ... Relative abundance of genus Acidaminococcus and family Ruminococcaceae were also associated with several measurements. ...
https://tools.niehs.nih.gov/portfolio/index.cfm?do=portfolio.publicationDetail&id=3841933
Microbial co-occurrence complicates associations of gut microbiome with US immigration, dietary intake and obesity | Genome...Microbial co-occurrence complicates associations of gut microbiome with US immigration, dietary intake and obesity | Genome...
For example, Acidaminococcus which was associated with obesity in the current study and other populations [40, 41] was found to ... 3B), since Acidaminococcus is known to use amino acids as energy source [42]. However, it remains unknown how increased gut ... Among six bacteria outside of clusters A and B, Acidaminococcus and Parasutterella were associated both with higher BMI and ... increased Acidaminococcus, decreased Roseburia, and Prevotella), potentially related to westernized diet during acculturation ...
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02559-w
IMMUNOTHERAPEUTIC METHODS AND COMPOSITIONS - KING S COLLEGE LONDONIMMUNOTHERAPEUTIC METHODS AND COMPOSITIONS - KING S COLLEGE LONDON
Alternatives to the Cas system include the Francisella novicida Cpfl (FnCpfl), Acidaminococcus sp. Cpfl (AsCpfl), and ...
https://www.sumobrain.com/patents/wipo/Immunotherapeutic-methods-compositions/WO2020128478A1.html
TREE NUMBER DESCRIPTORTREE NUMBER DESCRIPTOR
Acidaminococcus B03.353.500 Bacillales B03.353.500.050 Alicyclobacillus B03.353.500.100 Bacillaceae B03.353.500.100.108 ... Acidaminococcus B03.440.425.410.145 Anaerobiospirillum B03.440.425.410.194 Bacteroidaceae B03.440.425.410.194.152 Bacteroides ...
https://www.nlm.nih.gov/mesh/2019/download/2019New_Mesh_Tree_Hierarchy.txt
Name Taxonomy in SILVA v123
Acidaminococcus RSV_genus721 Bacteria;Firmicutes;Negativicutes;Selenomonadales;Acidaminococcaceae;NA RSV_genus722 Bacteria; ...
https://wwwn.cdc.gov/nchs/data/nhanes/omp/dada2rsv-taxonomy-annotate.txt
Genetic editing and interrogation with Cpf1 and caged truncated pre-tRNA-like crRNA in mammalian cells | Cell DiscoveryGenetic editing and interrogation with Cpf1 and caged truncated pre-tRNA-like crRNA in mammalian cells | Cell Discovery
... and Acidaminococcus Cpf1 (AsCpf1)20. Another study demonstrated that DNase-deactivated Cpf1 from Eubacterium eligens (EedCpf1) ...
https://www.nature.com/articles/s41421-018-0035-0
DeCSDeCS
Acidaminococcus - Preferred Concept UI. M0449492. Scope note. A genus of gram-negative bacteria in the family ... Acidaminococcus. Scope note:. Género de bacterias gramnegativas de la familia ACIDAMINOCOCCACEAE, aislada de los INTESTINOS de ...
https://decs.bvsalud.org/en/ths/resource/?id=37906
MeSH BrowserMeSH Browser
Acidaminococcus Preferred Term Term UI T540963. Date05/15/2003. LexicalTag NON. ThesaurusID NLM (2004). ... Acidaminococcus Preferred Concept UI. M0449492. Registry Number. txid904. Scope Note. A genus of gram-negative bacteria in the ... Acidaminococcus. Tree Number(s). B03.353.250. B03.440.425.410.073. Unique ID. D045850. RDF Unique Identifier. http://id.nlm.nih ...
https://meshb-prev.nlm.nih.gov/record/ui?ui=D045850
MeSH BrowserMeSH Browser
Acidaminococcus Preferred Term Term UI T540963. Date05/15/2003. LexicalTag NON. ThesaurusID NLM (2004). ... Acidaminococcus Preferred Concept UI. M0449492. Registry Number. txid904. Scope Note. A genus of gram-negative bacteria in the ... Acidaminococcus. Tree Number(s). B03.353.250. B03.440.425.410.073. Unique ID. D045850. RDF Unique Identifier. http://id.nlm.nih ...
https://meshb.nlm.nih.gov/record/ui?ui=D045850
Code System Concept
Genus Acidaminococcus (organism) {28207003 , SNOMED-CT } Parent/Child (Relationship Type) Acidaminococcus fermentans (organism ...
https://phinvads.cdc.gov/vads/ViewCodeSystemConcept.action?oid=2.16.840.1.113883.6.96&code=28207003
Genome editing (CRISPR/Cas9) | Diagenode Genome editing (CRISPR/Cas9) | Diagenode
Recently two new CRISPR-associated nucleases, Cpf1 from Lachnospiraceae bacterium and Cpf1 from Acidaminococcus sp., have been ...
https://www.diagenode.com/cn/categories/crispr-cas9-genome-editing
MicrobiomePrescription
Publication Year: 2018 / Subject term: digestive system - PubAg Search ResultsPublication Year: 2018 / Subject term: digestive system - PubAg Search Results
Acidaminococcus intestini is the first Negativicute bacterium (Gram‐negative Firmicute) shown to be resistant to beta‐lactam ... Acidaminococcus; antibiotic resistance; antibiotic resistance genes; bacteria; beta-lactam antibiotics; beta-lactamase; ...
https://pubag.nal.usda.gov/?f%5Bpublication_year_rev_facet%5D%5B%5D=7982-2018&f%5Bsubject_term%5D%5B%5D=digestive+system&per_page=20&sort=date-asc
4.2 Family members | Personal Science Guide to the Microbiome4.2 Family members | Personal Science Guide to the Microbiome
Acidaminococcus. 0.01. Me Species(%). Bacteroides plebeius. 2.38. Odoribacter laneus. 1.04. Dialister propionicifaciens. 0.37. ...
https://psm.personalscience.com/family-members.html
Clostridiales
This page is a Tree of Life Branch Page.. Each ToL branch page provides a synopsis of the characteristics of a group of organisms representing a branch of the Tree of Life. The major distinction between a branch and a leaf of the Tree of Life is that each branch can be further subdivided into descendent branches, that is, subgroups representing distinct genetic lineages.. For a more detailed explanation of the different ToL page types, have a look at the Structure of the Tree of Life page.. close box ...
http://tol.tolweb.org/Bryantella
Genomes encoding eukaryotic-like proteins | EffectiveDBGenomes encoding eukaryotic-like proteins | EffectiveDB
Acidaminococcus sp. D21. s. 4. 2. Acidaminococcus sp. HPA0509. s. 4. 2. ...
https://effectors.org/reports/eld_report?domainid=PF03652
Asthma | Disease | MetaBiomAsthma | Disease | MetaBiom
18 (32%) : Acidaminococcus , Actinomyces , Alistipes , Bacteroides , Escherichia coli , Eubacterium , Gemella , Haemophilus , ... 17 (30%) : Acidaminococcus , Actinomyces , Anaerostipes , Enterobacteriaceae , Escherichia coli , Haemophilus , Klebsiella , ... 57 (100%) : Acidaminococcus , Actinomyces , Adlercreutzia , Alistipes , Anaerostipes , Bacteroides , Cellulomonas , ... 15 (26%) : Acidaminococcus , Alistipes , Bacteroides , Eisenbergiella , Enterobacteriaceae , Faecalibacterium , Klebsiella , ...
https://www.metabiom.org/disease/41.html
c33cc33c
... superparamagnetic tiphiidae telecare pertinent pentamethyl incisal iminostilbene flexion telethermography acidaminococcus ...
https://lexsrv3.nlm.nih.gov/LexSysGroup/Projects/tc/2008/docs/data/Jdi/restrictWords.txt
Alt-R CRISPR-Cas12a (Cpf1) genome editingAlt-R CRISPR-Cas12a (Cpf1) genome editing
Alt-R A.s. Cas12a (Cpf1) Ultra and V3 nucleases are high purity, recombinant Acidaminococcus sp. Cas12a. The enzymes include ... Cas12a endonucleases from Acidaminococcus sp. BV3L6 or Lachnospiracaea bacterium ND2006 along with a crRNA is capable of ... a HEK-293-Cas12a cell line that stably expresses Acidaminococcus sp. Cas12a. Genomic DNA was isolated, and genome editing was ...
http://pages3.idtdna.com/pages/products/crispr-genome-editing/alt-r-crispr-cpf1-genome-editing
Model Search | BioModelsModel Search | BioModels
Acidaminococcus fermentans DSM 20731 (1) * Allocoleopsis franciscana PCC 7113 (1) * Streptococcus pneumoniae AP200 (1) ...
https://www.ebi.ac.uk/biomodels/search?query=
Pre GI: BLASTP Hits
Acidaminococcus fermentans DSM 20731, complete genome. hypothetical protein. 1e-06. 55.8. NC_010545:1475410:1484897. 1484897. ...
http://pregi.bi.up.ac.za/pre_gi_blast.php?blast_source_accession=NC_013446&blast_cds_query=NC_013446:2761000:2770402
FermentansCpf1GenusRelated to poor functionalStatusIntestini
Fermentans2
  • Structural basis for stereo-specific catalysis in NAD(+)-dependent (R)-2-hydroxyglutarate dehydrogenase from Acidaminococcus fermentans. (mpg.de)
  • Mortality and thigh swelling were pronounced (greater than 75%) in case of Fusobacterium gonidiaformans and Propionibacterium acnes but less (less than 50%) in Acidaminococcus fermentans. (who.int)
Cpf12
  • The AsCas12a protein (also called Cpf1) is derived from Acidaminococcus sp. (logancollinsblog.com)
  • Specifically, they used quantitative kinetics to dissect the reaction steps of DNA targeting by Acidaminococcus sp Cas12a (also known as Cpf1). (new21.net)
Genus1
  • They also identified one class (Kiritimatiellae), one genus ( Acidaminococcus ), and one species ( Paraprevotella xylaniphila ) that are related to poor functional outcome 3 months after ischemic stroke. (medscape.com)
Related to poor functional1
  • Negativibacillus and Lentisphaeria were associated with a more severe stroke in the acute phase (at 6 and 24 hours respectively) and Acidaminococcus related to poor functional outcomes at three months. (microbiota-site.com)
Status1
  • CONCLUSIONS: Association of Acidaminococcus with gestational weight gain could reinforce the relevance with mothers' nutritional status for gut colonization at the beginning of life. (bvsalud.org)
Intestini1
  • Acidaminococcus intestini is the first Negativicute bacterium (Gram‐negative Firmicute) shown to be resistant to beta‐lactam antibiotics. (usda.gov)