Acetobacteraceae
Microbial reduction of Fe(III) in acidic sediments: isolation of Acidiphilium cryptum JF-5 capable of coupling the reduction of Fe(III) to the oxidation of glucose. (1/68)
To evaluate the microbial populations involved in the reduction of Fe(III) in an acidic, iron-rich sediment, the anaerobic flow of supplemental carbon and reductant was evaluated in sediment microcosms at the in situ temperature of 12 degrees C. Supplemental glucose and cellobiose stimulated the formation of Fe(II); 42 and 21% of the reducing equivalents that were theoretically obtained from glucose and cellobiose, respectively, were recovered in Fe(II). Likewise, supplemental H(2) was consumed by acidic sediments and yielded additional amounts of Fe(II) in a ratio of approximately 1:2. In contrast, supplemental lactate did not stimulate the formation of Fe(II). Supplemental acetate was not consumed and inhibited the formation of Fe(II). Most-probable-number estimates demonstrated that glucose-utilizing acidophilic Fe(III)-reducing bacteria approximated to 1% of the total direct counts of 4', 6-diamidino-2-phenylindole-stained bacteria. From the highest growth-positive dilution of the most-probable-number series at pH 2. 3 supplemented with glucose, an isolate, JF-5, that could dissimilate Fe(III) was obtained. JF-5 was an acidophilic, gram-negative, facultative anaerobe that completely oxidized the following substrates via the dissimilation of Fe(III): glucose, fructose, xylose, ethanol, glycerol, malate, glutamate, fumarate, citrate, succinate, and H(2). Growth and the reduction of Fe(III) did not occur in the presence of acetate. Cells of JF-5 grown under Fe(III)-reducing conditions formed blebs, i.e., protrusions that were still in contact with the cytoplasmic membrane. Analysis of the 16S rRNA gene sequence of JF-5 demonstrated that it was closely related to an Australian isolate of Acidiphilium cryptum (99.6% sequence similarity), an organism not previously shown to couple the complete oxidation of sugars to the reduction of Fe(III). These collective results indicate that the in situ reduction of Fe(III) in acidic sediments can be mediated by heterotrophic Acidiphilium species that are capable of coupling the reduction of Fe(III) to the complete oxidation of a large variety of substrates including glucose and H(2). (+info)Acetogenic and sulfate-reducing bacteria inhabiting the rhizoplane and deep cortex cells of the sea grass Halodule wrightii. (2/68)
Recent declines in sea grass distribution underscore the importance of understanding microbial community structure-function relationships in sea grass rhizospheres that might affect the viability of these plants. Phospholipid fatty acid analyses showed that sulfate-reducing bacteria and clostridia were enriched in sediments colonized by the sea grasses Halodule wrightii and Thalassia testudinum compared to an adjacent unvegetated sediment. Most-probable-number analyses found that in contrast to butyrate-producing clostridia, acetogens and acetate-utilizing sulfate reducers were enriched by an order of magnitude in rhizosphere sediments. Although sea grass roots are oxygenated in the daytime, colorimetric root incubation studies demonstrated that acetogenic O-demethylation and sulfidogenic iron precipitation activities were tightly associated with washed, sediment-free H. wrightii roots. This suggests that the associated anaerobes are able to tolerate exposure to oxygen. To localize and quantify the anaerobic microbial colonization, root thin sections were hybridized with newly developed (33)P-labeled probes that targeted (i) low-G+C-content gram-positive bacteria, (ii) cluster I species of clostridia, (iii) species of Acetobacterium, and (iv) species of Desulfovibrio. Microautoradiography revealed intercellular colonization of the roots by Acetobacterium and Desulfovibrio species. Acetogenic bacteria occurred mostly in the rhizoplane and outermost cortex cell layers, and high numbers of sulfate reducers were detected on all epidermal cells and inward, colonizing some 60% of the deepest cortex cells. Approximately 30% of epidermal cells were colonized by bacteria that hybridized with an archaeal probe, strongly suggesting the presence of methanogens. Obligate anaerobes within the roots might contribute to the vitality of sea grasses and other aquatic plants and to the biogeochemistry of the surrounding sediment. (+info)Description of Gluconacetobacter sacchari sp. nov., a new species of acetic acid bacterium isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug. (3/68)
A new species of the genus Gluconacetobacter, for which the name Gluconacetobacter sacchari sp. nov. is proposed, was isolated from the leaf sheath of sugar cane and from the pink sugar-cane mealy bug, Saccharicoccus sacchari, found on sugar cane growing in Queensland and northern New South Wales, Australia. The nearest phylogenetic relatives in the alpha-subclass of the Proteobacteria are Gluconacetobacter liquefaciens and Gluconacetobacter diazotrophicus, which have 98.8-99.3% and 97.9-98.5% 16S rDNA sequence similarity, respectively, to members of Gluconacetobacter sacchari. On the basis of the phylogenetic positioning of the strains, DNA reassociation studies, phenotypic tests and the presence of the Q10 ubiquinone, this new species was assigned to the genus Gluconacetobacter. No single phenotypic characteristic is unique to the species, but the species can be differentiated phenotypically from closely related members of the acetic acid bacteria by growth in the presence of 0.01% malachite green, growth on 30% glucose, an inability to fix nitrogen and an inability to grow with the L-amino acids asparagine, glycine, glutamine, threonine and tryptophan when D-mannitol was supplied as the sole carbon and energy source. The type strain of this species is strain SRI 1794T (= DSM 12717T). (+info)Magnesium insertion by magnesium chelatase in the biosynthesis of zinc bacteriochlorophyll a in an aerobic acidophilic bacterium Acidiphilium rubrum. (4/68)
To elucidate the mechanism for formation of zinc-containing bacteriochlorophyll a in the photosynthetic bacterium Acidiphilium rubrum, we isolated homologs of magnesium chelatase subunits (bchI, -D, and -H). A. rubrum bchI and -H were encoded by single genes located on the clusters bchP-orf168-bchI-bchD-orf320-crtI and bchF-N-B-H-L as in Rhodobacter capsulatus, respectively. The deduced sequences of A. rubrum bchI, -D, and -H had overall identities of 59. 8, 40.5, and 50.7% to those from Rba. capsulatus, respectively. When these genes were introduced into bchI, bchD, and bchH mutants of Rba. capsulatus for functional complementation, all mutants were complemented with concomitant synthesis of bacteriochlorophyll a. Analyses of bacteriochlorophyll intermediates showed that A. rubrum cells accumulate magnesium protoporphyrin IX monomethyl ester without detectable accumulation of zinc protoporphyrin IX or its monomethyl ester. These results indicate that a single set of magnesium chelatase homologs in A. rubrum catalyzes the insertion of only Mg(2+) into protoporphyrin IX to yield magnesium protoporphyrin IX monomethyl ester. Consequently, it is most likely that zinc-containing bacteriochlorophyll a is formed by a substitution of Zn(2+) for Mg(2+) at a step in the bacteriochlorophyll biosynthesis after formation of magnesium protoporphyrin IX monomethyl ester. (+info)Evaluation of a fluorescent lectin-based staining technique for some acidophilic mining bacteria. (5/68)
A fluorescence-labeled wheat germ agglutinin staining technique (R. K. Sizemore et al., Appl. Environ. Microbiol. 56:2245-2247, 1990) was modified and found to be effective for staining gram-positive, acidophilic mining bacteria. Bacteria identified by others as being gram positive through 16S rRNA sequence analyses, yet clustering near the divergence of that group, stained weakly. Gram-negative bacteria did not stain. Background staining of environmental samples was negligible, and pyrite and soil particles in the samples did not interfere with the staining procedure. (+info)Development and application of small-subunit rRNA probes for assessment of selected Thiobacillus species and members of the genus Acidiphilium. (6/68)
Culture-dependent studies have implicated sulfur-oxidizing bacteria as the causative agents of acid mine drainage and concrete corrosion in sewers. Thiobacillus species are considered the major representatives of the acid-producing bacteria in these environments. Small-subunit rRNA genes from all of the Thiobacillus and Acidiphilium species catalogued by the Ribosomal Database Project were identified and used to design oligonucleotide DNA probes. Two oligonucleotide probes were synthesized to complement variable regions of 16S rRNA in the following acidophilic bacteria: Thiobacillus ferrooxidans and T. thiooxidans (probe Thio820) and members of the genus Acidiphilium (probe Acdp821). Using (32)P radiolabels, probe specificity was characterized by hybridization dissociation temperature (T(d)) with membrane-immobilized RNA extracted from a suite of 21 strains representing three groups of bacteria. Fluorochrome-conjugated probes were evaluated for use with fluorescent in situ hybridization (FISH) at the experimentally determined T(d)s. FISH was used to identify and enumerate bacteria in laboratory reactors and environmental samples. Probing of laboratory reactors inoculated with a mixed culture of acidophilic bacteria validated the ability of the oligonucleotide probes to track specific cell numbers with time. Additionally, probing of sediments from an active acid mine drainage site in Colorado demonstrated the ability to identify numbers of active bacteria in natural environments that contain high concentrations of metals, associated precipitates, and other mineral debris. (+info)Identification of acetic acid bacteria by RFLP of PCR-amplified 16S rDNA and 16S-23S rDNA intergenic spacer. (7/68)
DNA corresponding to 16S rDNA and the 165-23S rDNA intergenic spacer (ITS) from 22 reference strains of acetic acid bacteria, representing the diversity of the family Acetobacteraceae, and 24 indigenous acetic acid bacteria isolated from wine fermentations were analysed by PCR-RFLP. Frateuria aurantia LMG 1558T and Escherichia coli ATCC 11775T were included as outgroups. PCR-amplified products of about 1450 bp were obtained from the 16S rDNA of all the strains and products of between 675 and 800 bp were obtained from the 16S-23S rDNA ITS. PCR products were digested with 4-base-cutting restriction enzymes in order to evaluate the degree of polymorphism existing among these strains. Of the enzymes tested, Taql and Rsal were the most discriminatory and showed no intraspecific variations in the restriction patterns. Restriction analysis of the 16S rDNA with these enzymes is proposed as a rapid and reliable method to identify acetic acid bacteria at the level of genus and species (or related species group) and its applicability to identification of indigenous acetic acid bacteria was demonstrated. The same degree of distinction as that for the 16S rDNA analysis was obtained within reference strains of acetic acid bacteria by PCR-RFLP of the 16S-23S rDNA ITS. However, 16S-23S rDNA ITS restriction patterns of strains isolated from wine did not match those of any of the reference strains. Thus, PCR-RFLP of the 16S-23S rDNA ITS is not a useful method to identify isolates of acetic acid bacteria at the species level, although it may be an adequate method to detect intraspecific differentiation. (+info)Asaia siamensis sp. nov., an acetic acid bacterium in the alpha-proteobacteria. (8/68)
Five bacterial strains were isolated from tropical flowers collected in Thailand and Indonesia by the enrichment culture approach for acetic acid bacteria. Phylogenetic analysis based on 16S rRNA gene sequences showed that the isolates were located within the cluster of the genus Asaia. The isolates constituted a group separate from Asaia bogorensis on the basis of DNA relatedness values. Their DNA G+C contents were 58.6-59.7 mol%, with a range of 1.1 mol%, which were slightly lower than that of A. bogorensis (59.3-61.0 mol%), the type species of the genus Asaia. The isolates had morphological, physiological and biochemical characteristics similar to A. bogorensis strains, but the isolates did not produce acid from dulcitol. On the basis of the results obtained, the name Asaia siamensis sp. nov. is proposed for these isolates. Strain S60-1T, isolated from a flower of crown flower (dok rak, Calotropis gigantea) collected in Bangkok, Thailand, was designated the type strain ( = NRIC 0323T = JCM 10715T = IFO 16457T). (+info)
Granulibacter bethesdensis Greenberg et al. ATCC ® BAA-1260D-5&tra
Asaia bogorensis - Wikipedia
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Saccharibacter - Wikipedia
Bacteria of the genus Asaia stably associate with Anopheles stephensi, an Asian malarial mosquito vector
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The enumeration and identification of acetic acid bacteria from South African red wine fermentations
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Purple bacteria
Rhodospirillales Rhodospirillaceae, e.g. Rhodospirillum rubrum Acetobacteraceae, e.g. Rhodopila globiformis Hyphomicrobiales ...
Alphaproteobacteria
Rickettsiaceae, Anaplasmataceae, Rhodospirillaceae, Acetobacteraceae, Bradyrhiozobiaceae, Brucellaceae and Bartonellaceae). ...
Microbiome in the Drosophila gut
30%, members of the Bacillota) and Acetobacteraceae (approx. 55%, members of the Proteobacteria). Other less common bacterial ... such as Acetobacteraceae and Lactobacillaceae) if compared to fruit-eating species such as Drosophila hydei, Drosophila ...
Gluconacetobacter liquefaciens
... is a bacterium in the family Acetobacteraceae. It infects plants and is responsible for spoilage ...
Saccharibacter
... is a bacterial genus from the family of Acetobacteraceae. Up to now there is only one species of this genus ...
Komagataeibacter
... is a genus of bacteria in the family Acetobacteraceae. It was described in 2012 by Yamada et al. The type ... nov., with proposals of new combinations (Acetobacteraceae)". The Journal of General and Applied Microbiology. 58 (5): 397-404 ...
Belnapia
... is a genus of bacteria from the family of Acetobacteraceae. Parte, A.C. "Belnapia". LPSN. "Belnapia". www.uniprot.org ...
Kozakia
... is a genus of bacteria from the family of Acetobacteraceae. Up to now there is only one species of this genus known ( ... the First Sequenced Kozakia Strain from the Family Acetobacteraceae". Genome Announcements. 2 (3): e00594-14-e00594-14. doi: ...
Komagataeibacter xylinus
nov., with proposals of new combinations (Acetobacteraceae)". The Journal of General and Applied Microbiology. 58 (5): 397-404 ...
Bombella
... is a genus of bacteria from the family of Acetobacteraceae. Parte, A.C. "Bombella". LPSN. "Bombella". www.uniprot.org ...
Granulibacter bethesdensis
nov., a distinctive pathogenic acetic acid bacterium in the family Acetobacteraceae". Int J Syst Evol Microbiol. Pt 11. 56 (11 ...
Gluconacetobacter
nov., with proposals of new combinations (Acetobacteraceae)". The Journal of General and Applied Microbiology. 58 (5): 397-404 ...
Kombucha
Acetobacteraceae dominate 88 percent of the bacterial community of the SCOBY. The acetic acid bacteria in kombucha are aerobic ...
Acetic acid bacteria
The acetic acid bacteria consist of 10 genera in the family Acetobacteraceae. Several species of acetic acid bacteria are used ... Ecological occurrence of Gluconacetobacter diazotrophicus and nitrogen-fixing Acetobacteraceae members: their possible role in ... 204-213 International conference on acetic acid bacteria Wikispecies has information related to Acetobacteraceae. Portal: ...
Granulibacter
... is a Gram-negative and non-motile bacterial genus from the family of Acetobacteraceae. Up to now there is only ...
Rhodospirillales
The Acetobacteraceae comprise the acetic acid bacteria, which are heterotrophic and produce acetic acid during their ...
Craurococcus
... is a Gram-negative and non-motile genus of bacteria from the family of Acetobacteraceae with one known species ( ...
Commensalibacter
... is a genus of Gram-negative, aerobic and rod-shaped bacteria from the family of Acetobacteraceae which was ...
Gluconacetobacter diazotrophicus
... is a part of the Acetobacteraceae family and started out with the name, Saccharibacter ...
Asaia
... is a genus of Gram-negative, aerobic and rod-shaped bacteria from the family of Acetobacteraceae which occur in tropical ...
List of MeSH codes (B03)
... acetobacteraceae MeSH B03.440.400.425.100.100 - Acetobacter MeSH B03.440.400.425.100.110 - Acidiphilium MeSH B03.440.400.425. ... acetobacteraceae MeSH B03.660.050.663.050.010 - Acetobacter MeSH B03.660.050.663.050.020 - Acidiphilium MeSH B03.660.050.663. ...
Bacterial taxonomy
Acetic acid bacteria are members of the family Acetobacteraceae The abbreviation for species is sp. (plural spp.) and is used ...
Acetobacteraceae
Ten genera from Acetobacteraceae make up the acetic acid bacteria. Acetobacteraceae was originally proposed as a family for ... "Acetobacteraceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 7, 2021. Raspor P, Goranovic ... Acetobacteraceae page on the List of Prokaryotic Names with Standing (Articles with short description, Short description ... Acetobacteraceae is a family of Gram-negative bacteria, belonging to the order Rhodospirillales, class Alphaproteobacteria. Two ...
Acetobacteraceae Archives - Entomology Today
View source for Acetobacter - microbewiki
Pseudomonadaceae articles
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Encyclopedia of Life
Acetobacter ghanensis sp. nov., a novel acetic acid bacterium isolated from traditional heap fermentations of Ghanaian cocoa...
The different dietary sugars modulate the composition of the gut microbiota in honeybee during overwintering | BMC Microbiology...
HMG: Rhodospirillales Acetobacteraceae of Alphaproteobacteria was more abundant in MG; MG vs. SMG/FMG: Neisseriaceae of ... The presence of the supernal Alphaproteobacteria (Acetobacteraceae), Bifidobacterium, and Lactobacillaceae in the gut of ... Acetobacteraceae). The relative abundance of these taxa was higher in HG than in HHG/SHG/FHG and did not vary among the ... Acetobacteraceae), Bifidobacterium, and Lactobacillaceae in the gut of honeybees fed sucrose in the current study both indicate ...
Proteobacteria | Boundless Microbiology | | Course Hero
Name Taxonomy in SILVA v123
Acetobacteraceae;Asaia RSV_genus908 Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;Belnapia RSV_ ... Acetobacteraceae;Gluconobacter RSV_genus912 Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae;NA ... Acetobacteraceae;Acetobacter RSV_genus903 Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae; ... Acetobacteraceae;Acidisoma RSV_genus906 Bacteria;Proteobacteria;Alphaproteobacteria;Rhodospirillales;Acetobacteraceae; ...
Subject: Dysgonomonas and bacterial communities / Subject term: bacterial communities - PubAg Search Results
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DeCS
Pre GI: SWBIT SVG BLASTN
Komagataeibacter xylinus | Type strain | DSM 6513, ATCC 23767, BCC 7226, JCM 7644, LMG 1515, NBRC 15237, NCIMB 11664, BCRC...
Code System Concept
IRMNG - Acetobacter oxydans (Henneberg, 1897) Bergey et al., 1923
Genus: Roseicella
Mechanical characteristics of bacterial cellulose-reinforced mycelium composite materials | Fungal Biology and Biotechnology |...
Key words
Formigas
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MeSH Browser
KBI OSU DNA Sequence Study Analysis Report - Kombucha Brewers International
HAMAP
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JCM Catalogue
Bacteria Firmicutes Clostridia Clostridiales Peptostreptococcaceae Acetoanaerobium Acetoanaerobium noterae:745369
1156935 4 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Bacteria_ Acetobacteraceae bacterium AT ... 871741 3 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Acidiphilium Acidiphilium sp PM:1043206 ... 83263 3 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Roseomonas Roseomonas sp FDAARGOS_362: ... unresolved Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Acetobacter sp DsW_47:1670659 2 Bacteria ...
Bacteria2
- This group of bacteria is in the Acetobacteraceae family of bacteria which is involved in turning your wine into vinegar. (bigroom.org)
- In this example, 2.7% of the bacterial population is made up of bacteria within family Acetobacteraceae that could not be assigned to a genus. (kombuchabrewers.org)
Acetobacter1
- Currently there are 10 genera in the family Acetobacteraceae , one of these is Acetobacter, which can oxidize ethanol to carbon dioxide and water using Krebs cycle enzymes. (gotrum.com)
Species1
- The 16S rDNA-based phylogeny confirmed the affiliation of strain nîmes373 to the species A. cibinongensis in the family Acetobacteraceae ( Figure ). (cdc.gov)
Bacterium3
- Available for licensing and commercial development is a newly discovered bacterium in the Acetobacteraceae family. (nih.gov)
- The newly described bacterium belongs to a new genus and species in the Acetobacteraceae family and was named Granulibacter bethesdensis. (nih.gov)
- The bacterium, Granulibacter bethesdensis is a novel member of the Acetobacteraceae family. (nih.gov)
Proteobacteria1
- The bacterial populations included members of the Acetobacteraceae, Clostridiaceae, and Proteobacteria. (figshare.com)
Genus1
- HN - 2004 MH - Acidiphilium UI - D041801 MN - B3.440.400.425.100.110 MN - B3.660.50.10.20 MS - A genus in the family ACETOBACTERACEAE consisting of chemoorganotrophic, straight rods with rounded ends. (nih.gov)
Bethesdensis2
- The authors concluded that this newly detected coccobacillus from the family Acetobacteraceae with the proposed name Granulobacter bethesdensis is another catalase-positive organism that causes disease in CGD. (medscape.com)
- Granulibacter bethesdensis, a member of the Acetobacteraceae family, causes recurrent infections in patients with Chronic Granulomatous Disease (CGD), a deficiency in the NADPH oxidase. (nih.gov)
Family3
- These authors, from the National Institute of Allergy and Infectious Diseases (NIAID), report the discovery of a novel gram-negative bacillus from the family Acetobacteraceae associated with necrotizing lymphadenitis in a patient with chronic granulomatous disease (CGD). (medscape.com)
- The 16S rRNA gene was sequenced and compared to sequences in GenBank, and the best fit was with members of the family Acetobacteraceae, a family that has never been known to cause human disease. (medscape.com)
- These represent the first cases of disease in humans caused by a member of the family Acetobacteraceae, which are ubiquitous in the environment, being found in fruits, fermented food, plants, soil, and water. (medscape.com)
Familia1
- Familia de bacterias gramnegativas aerobias que constan de células de forma elipsoidal a bacilar que se encuentran aisladas, en parejas o en cadenas. (bvsalud.org)
Prevalent1
- Beijerinckiaceae, Acetobacteraceae and Mycobacteriaceae) were also prevalent in the livestock-affected and densely-populated regions. (bvsalud.org)
Convert alcohol1
- Acetobacteraceae are characterized by their ability to convert alcohol (ethanol) to acetic acid in the presence of air. (nih.gov)