Gene Expression ProfilingOligonucleotide Array Sequence AnalysisGene Expression RegulationTranscription, GeneticGene Expression Regulation, PlantGene Expression Regulation, DevelopmentalRNA, MessengerMicroRNAsGene ExpressionPromoter Regions, GeneticTranscription FactorsBase SequenceRNA, UntranslatedMolecular Sequence DataTranscriptomeComputational BiologyReverse Transcriptase Polymerase Chain ReactionGene Expression Regulation, NeoplasticGene Expression Regulation, FungalGenomeGene Expression Regulation, BacterialChromatinModels, GeneticBinding SitesMicroarray AnalysisCluster AnalysisSignal TransductionAlgorithmsGene Expression Regulation, ArchaealGene Regulatory NetworksNucleic Acid ConformationUp-RegulationSequence Analysis, RNACell LineDown-RegulationCell Line, TumorCells, CulturedDNA-Binding ProteinsArabidopsisRegulonGene Expression Regulation, ViralRNA StabilitySequence Analysis, DNAGene Expression Regulation, EnzymologicModels, BiologicalMicrodissectionMutationPhenotypeEvolution, MolecularBacterial ProteinsCell DifferentiationReal-Time Polymerase Chain Reaction3' Untranslated RegionsEpigenesis, GeneticRNAMice, Inbred C57BLGenes, PlantExpressed Sequence TagsReproducibility of Results5' Untranslated RegionsDNA MethylationGenomicsAlternative SplicingAmino Acid SequencePolymerase Chain ReactionDNA, ComplementaryHistonesGene Expression Regulation, LeukemicMetabolic Networks and PathwaysStress, PhysiologicalLaser Capture MicrodissectionTrans-ActivatorsConserved SequenceDNA PrimersGenes, ReporterMultigene FamilyIn Situ HybridizationSoftwarePrincipal Component AnalysisHost-Pathogen InteractionsRepressor ProteinsBlotting, NorthernTime FactorsGene DeletionProtein Array AnalysisCell ProliferationTranscriptional ActivationChromatin ImmunoprecipitationDatabases, GeneticRNA, PlantGenome, BacterialEmbryonic Stem CellsMice, TransgenicBlotting, WesternLiverDisease Models, AnimalGene LibraryImmunohistochemistryRNA, BacterialPlant Roots