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  • PMID
  • In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [ PMID: 11290319 , PMID: 11114498 ]. (ebi.ac.uk)
  • The number of proteins produced by prokaryotes is smaller, reflected in the lower number of ribosomal proteins present in them [ PMID: 10938081 ]. (ebi.ac.uk)
  • Experimental evidence [ PMID: 9371771 ] has revealed that S10 has virtually no groups exposed on the ribosomal surface, and is one of the "split proteins": these are a discrete group that are selectively removed from 30S subunits under low salt conditions and are required for the formation of activated 30S reconstitution intermediate (RI*) particles. (ebi.ac.uk)
  • In E. coli, the C-terminal half of L11 has been shown [ PMID: 2483975 ] to be in an extended and loosely folded conformation and is likely to be buried within the ribosomal structure. (ebi.ac.uk)
  • sequence
  • Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed. (uniprot.org)
  • Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. (nih.gov)
  • In eukaryotes, the proteins that perform the equivalent function to L7/L12 are called P1 and P2, which do not share sequence similarity with L7/L12. (ebi.ac.uk)
  • The Nmd3 protein sequence does not contain readily recognizable motifs of known function. (asm.org)
  • Right now, this high sequence similarity takes on a new meaning in the context of front-loading evolution - if this sequence is so strongly conserved, it could be used to code for other proteins through a) a shift in the reading frame and/or b) the sequence on the complementary strand of DNA. (wordpress.com)
  • Download DNA or protein sequence, view genomic context and coordinates. (yeastgenome.org)
  • Basic sequence-derived (length, molecular weight, isoelectric point) and experimentally-determined (median abundance, median absolute deviation) protein information. (yeastgenome.org)
  • Click "Protein Details" for further information about the protein such as half-life, abundance, domains, domains shared with other proteins, protein sequence retrieval for various strains, physico-chemical properties, protein modification sites, and external identifiers for the protein. (yeastgenome.org)
  • Here we show that mutation or deletion of a putative nuclear export sequence in LTV1 is strongly dominant negative, but the protein does not accumulate in the nucleus, as expected for a mutation affecting export. (genetics.org)
  • encodes
  • SKI6 encodes an essential 3′→5′ exonuclease that is a component of the exosome ( 45 ), and ski6 mutants have defects in assembly of 60S ribosomal subunits ( 7 ). (asm.org)
  • Map-based cloning and DNA sequencing analyses of wgl2 revealed a single-nucleotide substitution (G to T) in the first exon of LOC_Os03g55930, which resulted in a substitution of glycine 92 to valine (G92 V). WGL2 encodes a conserved ribosomal protein, which localizes to the chloroplast. (springer.com)
  • WGL2 encodes a conserved ribosomal protein, which localizes to the chloroplast. (springer.com)
  • nonsense-media
  • NMD3 (nonsense-mediated decay) was previously identified from a two-hybrid screen for proteins that interact with the nonsense-mediated decay factor Upf1p ( 22 ). (asm.org)
  • mitochondrial proteins
  • The expression pattern and mutant phenotype of RPS9M are similar to those of ANK6 as well, suggesting that RPS9M may work together with ANK6 in controlling female gametophyte development, possibly by regulating the expression of some mitochondrial proteins. (frontiersin.org)
  • genome
  • Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome. (nih.gov)
  • In addition to this RNB-specific module, which was successfully tested on unknown field isolates, a subset of 13 ribosomal proteins extracted from genome data was found to be sufficient for the reliable identification of nodule isolates to rhizobial species as shown in the putatively ascribed ribosomal protein masses (PARPM) database. (springer.com)
  • complexes
  • Laser light scattering has been used to evaluate conformational differences between free 16S RNA and several specific protein-16S RNA complexes. (sciencemag.org)
  • Such RNA-protein complexes were isolated on sucrose density gradients. (uniprot.org)
  • Protein species present in these complexes were isolated, iodinated, and analyzed by two-dimensional polyacrylamide gel electrophoresis. (uniprot.org)