TranscriptomeRNA, UntranslatedRNA, BacterialGene Expression ProfilingGenome, BacterialGene ExpressionRNA, Small UntranslatedGene Expression RegulationOligonucleotide Array Sequence AnalysisRNA, MessengerSequence Analysis, RNAHost Factor 1 ProteinGene Expression Regulation, BacterialTranscription, GeneticGene Expression Regulation, PlantMolecular Sequence AnnotationBase SequenceHigh-Throughput Nucleotide SequencingReverse Transcriptase Polymerase Chain ReactionGene Expression Regulation, DevelopmentalExpressed Sequence TagsMolecular Sequence DataCluster AnalysisRNA, PlantPromoter Regions, GeneticTranscription FactorsGene Expression Regulation, NeoplasticGene LibraryComputational BiologyGene Regulatory NetworksMicroarray AnalysisGenes, PlantGenomicsSequence Analysis, DNASignal TransductionGene Expression Regulation, EnzymologicDatabases, GeneticRNAMicroRNAsGene OntologyGene Expression Regulation, FungalRNA, ArchaealMutationGene Expression Regulation, ViralBacterial ProteinsCells, CulturedArabidopsisRNA, AntisenseCell LineDNA-Binding ProteinsDNA, ComplementaryReal-Time Polymerase Chain ReactionModels, GeneticRNA StabilityReproducibility of ResultsUp-RegulationBlotting, NorthernPhenotypeGenomeDown-RegulationGenome, PlantRepressor ProteinsProteomeCell DifferentiationGenes, ReporterCell Line, TumorStress, PhysiologicalOrgan SpecificityContig MappingPolymerase Chain ReactionDNA PrimersSoftwareAlgorithmsMice, Inbred C57BLBinding SitesPhylogenyRNA, Small InterferingPlant ProteinsMultigene FamilyTime FactorsBase PairingPyrococcus abyssiRegulonTranscriptional ActivationIn Situ HybridizationSequence AlignmentRNA InterferenceRNA Processing, Post-TranscriptionalTrans-ActivatorsEscherichia coliAmino Acid SequenceTransfectionMetabolic Networks and PathwaysModels, BiologicalNuclear ProteinsPlant RootsDNA, IntergenicProtein BiosynthesisChromosome MappingPlant Leaves