• We report a clinically heterogeneous, multigenerational pedigree with the syndrome of mitochondrial encephalomyopathy, lactic acidosis, and stroke-like episodes (MELAS) associated with a mutation at nucleotide 3243 in the mitochondrial DNA tRNA(Leu)(UUR) gene. (nih.gov)
  • The deacylated tRNA remains in the P-site and is released once the peptidyl-tRNA is transferred to the P-site. (wikipedia.org)
  • In these hybrid states of binding, acceptor and anti-codon ends of tRNA are in different sites (A, P and E). Using chemical probing methods, a set of phylogenetically conserved bases in ribosomal RNA where the tRNA binds has been examined, and is suggested to be directly involved in the binding of tRNA to the prokaryotic ribosome. (wikipedia.org)
  • Approximately 80% of patients with the clinical characteristics of MELAS syndrome have a heteroplasmic A-to-G point mutation in the dihydrouridine loop of the transfer RNA (tRNA) Leu (UUR) gene at base pair (bp) 3243 (ie, 3243 A → G mutation). (medscape.com)
  • [ 3 ] However, other mitochondrial DNA (mtDNA) mutations are observed, including the m.3244 G → A, m.3258 T → C, m.3271 T → C, and m.3291 T → C in the mitochondrial tRNA Leu(UUR) gene. (medscape.com)
  • We have recently reported that point mutations in the tRNA(Leu) (UUR) and tRNA(Lys) genes cause a defect in the normal modification at the first nucleotide of the anticodon. (elsevierpure.com)
  • Goto Y., Nonaka I., Horai S. A mutation in the tRNA(Leu)(UUR) gene associated with the MELAS subgroup of mitochondrial encephalomyopathies. (ima-press.net)
  • Transfer RNA (tRNA) molecules contain various post-transcriptional modifications that are crucial for tRNA stability, translation efficiency, and fidelity. (mdpi.com)
  • Besides their canonical roles in translation, tRNAs also originate tRNA-derived small RNAs (tsRNAs), a class of small non-coding RNAs with regulatory functions ranging from translation regulation to gene expression control and cellular stress response. (mdpi.com)
  • He received his Ph.D. degree in the laboratory of Dr. En-Duo Wang in Biochemistry and Molecular Biology from Shanghai Institute of Biochemistry and Cell Biology of Chinese Academy of Science in 2008, where he studied the structural and functional interplay of transfer RNA (tRNA) and tRNA synthetase in bacteria, yeast and human. (rochester.edu)
  • F o For as long as living things have been building proteins based on the code of messenger RNA molecules, there have been aminoacyl-tRNA synthetases. (fascea.pics)
  • We also detect and annotate transfer and ribosomal RNAs. (ethz.ch)
  • M7G modification, known as one of the common post-transcriptional modifications of RNA, is present in many different types of RNAs. (beds.ac.uk)
  • The biosynthesis of PEPTIDES and PROTEINS on RIBOSOMES, directed by MESSENGER RNA, via TRANSFER RNA that is charged with standard proteinogenic AMINO ACIDS . (lookformedical.com)
  • Serine and arginine-rich (SR) proteins are RNA-binding proteins (RBPs) known as constitutive and alternative splicing regulators. (molcells.org)
  • This mini-review will summarize the roles of SR proteins as RNA binders, regulators, and connectors from transcription in the nucleus to translation in the cytoplasm. (molcells.org)
  • In this mini-review, the essential functions of SR proteins in splicing regulation, with a focus on their roles as RNA binders in the ribonucleoprotein complex (RNP) will be summarized. (molcells.org)
  • Regulatory non-coding RNAs and RNA-binding proteins (RBPs) are important research areas in gene regulation and RNA biology. (rochester.edu)
  • Circular dichroism study of nine species of transfer ribonucleic acid. (colorado.edu)
  • The definitive determinant of XLA is the complete absence of BTK ribonucleic acid (RNA) or protein. (medscape.com)
  • Molecular formula of common RNA modifications. (beds.ac.uk)
  • Our laboratory is interested in the understanding of pathophysiological function and molecular mechanism of new non-coding RNAs (and RBPs) and new modes of gene regulation in c. (rochester.edu)
  • The long-term objective of our laboratory is to identify novel RNA-based molecular mechanisms that control gene expression and conduct pathophysiological function in cardiac system, as well as to develop novel therapeutic approaches for the prevention or treatment of human cardiovascular diseases. (rochester.edu)
  • Cellular respiration (oxidative phosphorylation) occurs in the mitochondria, where a series of enzymes catalyze the transfer of electrons to molecular oxygen and the generation of energy-storing adenosine triphosphate (ATP). (msdmanuals.com)
  • These enzymes, abbreviated as AARS, link transfer RNAs (tRNAs) with the corresponding amino acids. (fascea.pics)
  • Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA. (colorado.edu)
  • Mitochondrial myopathy associated with sudden death in young adults and a novel mutation in the mitochondrial DNA transfer RNA[Leu(UUR)] gene. (ima-press.net)
  • With the accurate identification of m7G modifications within RNAs, their functional roles in the regulation of gene expression and different physiological functions have been revealed. (beds.ac.uk)
  • The detection of RNA modifications is fundamental to the study of m7G modifications in the regulation of gene expression. (beds.ac.uk)
  • A transfer RNA which is specific for carrying leucine to sites on the ribosomes in preparation for protein synthesis. (lookformedical.com)
  • All 13 protein-coding genes use ATN or TTG as start codon, and end with TAA/G or incomplete stop codons (single T-). Twenty-one transfer RNA genes have the typical clover-leaf structures, while the dihydrouridine (DHU) arm of trnS1 is missing. (researchsquare.com)
  • In general, RRM domains recognize RNA, whereas RS domains participate in diverse protein-protein and protein-RNA interactions. (molcells.org)
  • Recently, noncoding RNAs (ncRNAs) have been reported to regulate protein expression, and it is definite that PTEN expression is controlled by ncRNAs epigenetically or posttranscriptionally as well. (biomedcentral.com)
  • A group of transfer RNAs which are specific for carrying each one of the 20 amino acids to the ribosome in preparation for protein synthesis. (wakehealth.edu)
  • We developed a machine learning model, RoseTTAFoldNA, that can predict the structures of protein-DNA and protein-RNA complexes. (nature.com)
  • We recently discovered a new type of stress-responsive, protein-directed human RNA switch that regulates expression of vascular endothelial growth factor-A in human monocytic cells (Ray, PS, et al. (rochester.edu)
  • Intriguingly, some of these RNA switches involve the interplay between microRNA and RNA-binding protein (Jafarifar, F, et al. (rochester.edu)
  • 2019) HER3-targeted protein chimera forms endosomolytic capsomeres and self-assembles into stealth nucleocapsids for systemic tumor homing of RNA interference in vivo. (cedars-sinai.edu)
  • Rentsendorj A., J. Xie, M. MacVeigh, H. Agadjanian, S. Bass, S. Hamm-Alvarez and L.K. Medina-Kauwe (2006) Typical and Atypical Trafficking Pathways of Ad5 Penton Base Recombinant Protein: Implications for Gene Transfer, Nature - Gene Therapy 13(10):821-36. (cedars-sinai.edu)
  • The collaborative team, led by Professor Chunming Wang at the University of Macau and Professor Lei Dong at Nanjing University, are inspired by tumor-associated macrophages (TAMs), which play essential roles in driving tumor development by secreting factors that promote blood vessel formation and inhibit immune attack. (healthcare-in-europe.com)
  • A transfer RNA, which acts as an adaptor molecule for translation of mRNA. (ensembl.org)
  • Not only is m7G involved in the normal physiological metabolism of RNA, but recent research also shows that m7G and related regulators appear to be considerably dysregulated in tumors [ 12 ]. (beds.ac.uk)
  • Transcription in eukaryotes is carried out by three main RNA polymerases: Pol I, II, and III. (mdpi.com)
  • Transcript evaluation Complete RNA was isolated from fresh blood with QIAamp RNA blood kit, and single stranded cDNA was synthesized together with the GoScript reverse transcription procedure in ac cordance using the companies directions. (mirnainhibitors.com)
  • Recent global analyses of SR-RNA interaction maps have advanced our understanding of SR-regulated gene expression. (molcells.org)
  • Epigenetics refers to heritable changes in gene expression without changing the nucleotide sequence of the gene, including DNA methylation, histone modifications, and RNA modifications. (beds.ac.uk)
  • RNA, Transfer, Amino Acid-Specific" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus, MeSH (Medical Subject Headings) . (wakehealth.edu)
  • This graph shows the total number of publications written about "RNA, Transfer, Amino Acid-Specific" by people in this website by year, and whether "RNA, Transfer, Amino Acid-Specific" was a major or minor topic of these publications. (wakehealth.edu)
  • Below are the most recent publications written about "RNA, Transfer, Amino Acid-Specific" by people in Profiles. (wakehealth.edu)
  • Single-cell RNA sequencing reveals localized tumour ablation and intratumoural immunostimulant delivery potentiate T cell mediated tumour killing. (utah.edu)
  • Furthermore, gene analytical tools, one of which is named single-cell RNA sequencing, revealed some surprising findings. (healthcare-in-europe.com)
  • Metabolite analysis demonstrated that kimchi fermentation using Leu. (who.int)
  • In this study, a combination of a barcoded pyrosequencing strategy and a (1)H NMR technique was used to investigate the effects of Leu. (who.int)
  • With the rapid development of sequencing technology, m7G has become a new research hotspot of RNA modification. (beds.ac.uk)
  • When transferred to the wound bed in diabetic mice, these cells potently induced cell proliferation, resolved inflammation and orchestrated vasculature in the typically non-healing wounds. (healthcare-in-europe.com)
  • Subsequent to the integration of regulatory information, RNA Polymerase II (Pol II) and general transcription factors (GTFs) must recognize core promoters to together initiate transcription at specific sequences, transcription start sites (TSSs). (biomedcentral.com)
  • Levels of Brf1 and Pol III (RNA polymerase III-dependent) gene transcription in HCC patients with alcohol consumption are higher than the cases of non-HCC with or without alcohol intake. (oncotarget.com)
  • However, little is known about the role of alcohol in Brf1 and Pol III gene (RNA polymerase III-dependent gene) transcription, which is responsible for protein synthesis and tightly linked to cell transformation and tumor development. (oncotarget.com)
  • Last year, at the beginning of the pandemic, we focused our interest on the SARS-CoV-2 viral proteins, including the RNA-dependent RNA polymerase, the helicase, the exoribonuclease and the methyltransferase complex, all of which contain highly conserved LYR motifs. (nih.gov)
  • Work from our group, in collaboration with colleagues at the Pennsylvania State University, NIAID, NINDS and NCI, found that the oral drug TEMPOL potently inhibited the activity of the RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2, which is the core component of coronavirus replication (Fig. 2) [1]. (nih.gov)
  • Iron-sulfur cofactors in the SARS-CoV-2 RNA-dependent RNA polymerase are antiviral targets. (nih.gov)
  • D. RNA polymerase activity of the RdRp complexes anoxically purified from control and TEMPOL-treated (T) Expi293F cells shows that TEMPOL potently inhibited the activity of the RdRp. (nih.gov)
  • As part of the efforts to develop potential drugs with promise for clinical use, a molecular docking study on azole (triazole and pyrazole) based molecules on the main protease M pro and RNA polymerase was conducted, as possible inhibitors that could be elected for further experimental bioassays. (researchsquare.com)
  • Autodock has been employed to identify azole derivatives 1 - 6 preferred conformations in the active site of the enzyme and to estimate their binding affinities to the protease and RNA polymerase targets. (researchsquare.com)
  • They also exhibit improved binding affinities to RNA polymerase (-6.3 to -7.1 kcal/mol) comparable to remdesivir (-6.6 kcal/mol). (researchsquare.com)
  • Based on the observed binding energies, these compounds may possess anti-coronavirus bioactivity through inhibition of the virus main protease as well as RNA polymerase activities in living cells. (researchsquare.com)
  • . 4 , 10 On the other hand, RNA polymerase mediates the replication of the SARS-CoV-2 virus through a complex of non-structural proteins (nsp) for the virus. (researchsquare.com)
  • 6 , 11-12 Inhibition of the RNA-dependent RNA polymerase (RdRp) activity will rationally hinder binding of the template and reduce/limit its replication process, and is therefore a fundamental molecular target for antiviral drugs. (researchsquare.com)
  • Herein, we provide a discussion on the bioinformatics of the triazole and pyrazole derivatives containing acridine frameworks as possible inhibitors of SARS-CoV-2 M pro and RNA-dependent RNA-polymerase (RdRp). (researchsquare.com)
  • For example, bacterial relA- mutants that can't make ppGpp (an important signaling molecule) are very sick and often acquire a second mutation in rpoB (RNA polymerase subunit) that fixes mosts of the problems associated with the relA- mutation. (slideserve.com)
  • A new mitochondrial transfer RNAPro gene mutation associated with myoclonic epilepsy with ragged-red fibers and other neurological features. (medlineplus.gov)
  • Transfer RNAs help assemble protein building blocks (amino acids) into functioning proteins. (medlineplus.gov)
  • The m 6 A modification is recognized by the reader proteins, such as YTH-domain family proteins and specific RNA binding proteins (RBPs), which mediate the downstream effects of m 6 A methylation [ 4 ]. (biomedcentral.com)
  • Upon cleavage of ATP by HSPA9, a conformational change occurs, which likely enables ISC transfer from ISCU to recipient proteins. (nih.gov)
  • In addition, the low protein level of MyoD-Y156F was recovered over that of crazy type by an Somatostatin additional mutation at Leu-164, a critical binding residue of MAFbx/AT-1, a Skp, Cullin, F-box (SCF) E3-ubiquitin Somatostatin ligase. (immune-source.com)
  • Some tRNAs contain a fifth stem-loop named extra arm, which is located in the RNA sequence between the anticodon stem and the T stem [ 5 ]. (biomedcentral.com)
  • While Topsy-Turvy makes predictions using only sequence data, during the training phase it takes a transfer-learning approach by incorporating patterns from both global and molecular-level views of protein interaction. (iscb.org)
  • A sequence of amino acids in a polypeptide or of nucleotides in DNA or RNA that is similar across multiple species. (lookformedical.com)
  • Viral RNA was extracted from each sample by using nucleic acid isolation magnetic beads, according to the manufacturer's instructions (TianLong Science and Technology Co. Ltd, Xi'an, China). (medscape.com)
  • Inhibition of ALS enzyme will affect synthesis of the branched-chain amino acids (Val, Leu and Ile) and eventually result in the death of plants. (biomedcentral.com)
  • Cellular respiration (oxidative phosphorylation) occurs in the mitochondria, where a series of enzymes catalyze the transfer of electrons to molecular oxygen and the generation of energy-storing adenosine triphosphate (ATP). (msdmanuals.com)
  • I. A study by electron microscopy of the RNA and RNA-DNA hybrids of HeLa mitochondria. (caltech.edu)
  • Typically, Ad vectors are converted into mammalian gene transfer vectors by replacing the E1 gene with the foreign gee of interest. (biomedcentral.com)
  • These organelles play a crucial role in intercellular messengers, transferring bioactive molecules to nearby or distant cells under physiological and pathological conditions [ 14 , 15 ]. (hindawi.com)
  • The prebiotic evolutionary advantage of transferring genetic information from RNA to DNA. (mdc-berlin.de)
  • Metabolic dependencies & novel genetic codes prevent functional transfer of DNA to other cells. (nih.gov)
  • Shep harbors two highly conserved RNA recognition motifs (RRMs), and genetic evidence points to a functional relationship between its RNA-binding capability and insulator function. (nih.gov)
  • These were recombinants that exchanged genetic material such that they became w.t. for all 5 loci: met , bio , thr , leu and thi. (slideserve.com)
  • We extracted total RNA from the patient respiratory specimens and from H7N9-positive environmental samples and sequenced avian influenza virus genomes by using next-generation sequencing on an Illumina MiSeq (Illumina Inc., Shanghai, China). (medscape.com)
  • Coronaviruses (CoVs) among all known RNA viruses have the largest genomes ranging from 26 to 32 kb in length. (biomedcentral.com)
  • 12. Exosomal Micro-RNA-96 Derived From Bone Marrow Mesenchymal Stem Cells Inhibits Doxorubicin-Induced Myocardial Toxicity by Inhibiting the Rac1/Nuclear Factor-κB Signaling Pathway. (nih.gov)
  • 13. Transfer of exosomal microRNAs confers doxorubicin resistance in osteosarcoma cells. (nih.gov)
  • This review provides theoretical references and evidences for further exploration of exosomes as noncoding RNA carriers to regulate bone tissue recovery through the following aspects: (1) basic characteristics of exosomes, (2) research progress of exosomal noncoding RNA in bone tissue engineering, (3) current status and advantages of engineering exosomes as nanocarriers for noncoding RNA delivery, and (4) problems and application prospects of exosome therapy in the field of orthopedics. (hindawi.com)
  • In addition, we focused on elaborating the feasible clinical application of bone exosomes and the characteristics of exosomal noncoding RNAs in the regulation of bone reconstruction. (hindawi.com)
  • The RNA-Sequencing was employed to identify candidate genes involved in non-target-site metabolic resistance in this population. (biomedcentral.com)
  • Transfer times can be used to map genes. (slideserve.com)
  • A transfer RNA, which acts as an adaptor molecule for translation of mRNA. (ensembl.org)
  • leucine (1.45 XX 107 cepm/ umole), 0.0006 M GTP, 0.01 M PEP, 30 ug/ml PEP-kinase, 0.01 4 GSH, 0.013 MgCh, 0.03 M KCl, 0.05 M Tris HCl pH 7.4, and purified transfer factor as noted, in a volume of 0.50 ml. (nih.gov)
  • In order to better understand the mechanism of exosomes as noncoding RNA vectors regulating bone remodeling, we reviewed the newest findings on the feature and role of exosomes in bone formation. (hindawi.com)
  • Adenoviruses (Ad) are excellent gene transfer vectors and are extensively used for high-level transgene expression in vitro and in vivo . (biomedcentral.com)
  • Transcription regulation has been of intense interest for decades as it determines how much RNA is synthesized for a given gene or locus. (biomedcentral.com)
  • Exosome production, secretion, and cargo transfer from donor cells to recipient cells. (hindawi.com)
  • 7. Long non-coding RNA PVT1 encapsulated in bone marrow mesenchymal stem cell-derived exosomes promotes osteosarcoma growth and metastasis by stabilizing ERG and sponging miR-183-5p. (nih.gov)
  • 17. Generation of Small RNA-Modulated Exosome Mimetics for Bone Regeneration. (nih.gov)
  • This can be to "complement" mutations by making diploids The excised F element (called an F') carries the lac+ locus which can provide w.t. lac function when transferred into a lac- strain. (slideserve.com)
  • In this issue, Gao and colleagues begin by examining a subset of RNA sequencing (RNAseq) data from 2019 that included vehicle control and TGF- β 1-treated fibroblasts from three IPF patients. (aspetjournals.org)
  • Transcription in eukaryotes is carried out by three main RNA polymerases: Pol I, II, and III. (mdpi.com)
  • Avian influenza virus H7 and N9 gene segments were detected in the total RNA by using an H7N9 dual-channel Taqman probe reverse transcription PCR kit (BioPerfectus Co. Ltd., Taizhou, China). (medscape.com)
  • Open in a separate window Number 2 The Rabbit Polyclonal to OR2D3 rates of the assessment of anti-HCV antibody, HCV RNA, and treatment in the prescreening and post-screening periods. (immune-source.com)
  • b) Quantity and rate of HCV RNA detection, treatment and SVR12. (immune-source.com)
  • The paradox of dual roles in the RNA world: resolving the conflict between stable folding and templating ability. (mdc-berlin.de)
  • The inset shows the clinical application of noncoding RNA exosomes [ 19 ]. (hindawi.com)
  • We review recent advances in the design and application of excited-state intramolecular proton-transfer (ESIPT) based fluorescent probes. (rsc.org)
  • Respiratory tract specimens (throat swab or sputum sample) were collected from patients and transferred to the national laboratory at the Chinese Center for Disease Control and Prevention (China CDC) for confirmation. (medscape.com)