AnatomyOrganismsChemicals and DrugsAnalytical, Diagnostic and Therapeutic Techniques and EquipmentPhenomena and ProcessesDisciplines and OccupationsAnthropology, Education, Sociology and Social PhenomenaTechnology, Industry, AgricultureInformation ScienceHealth Care
PinusPhylogenyPinus sylvestrisPinus taedaPinus ponderosaGymnospermsEvolution, MolecularTreesSequence Analysis, DNABiological EvolutionMolecular Sequence DataLikelihood FunctionsSpecies SpecificityWoodDNA, Ribosomal SpacerGenetic VariationDNA, ChloroplastSequence AlignmentFossilsPinaceaeConiferophytaDNA, PlantDNA, RibosomalDNA, MitochondrialBayes TheoremModels, GeneticBasidiomycotaGenetic SpeciationBase SequenceRNA, Ribosomal, 16SAngiospermsRNA, Ribosomal, 18SMycorrhizaePlant StemsGeographyTylenchidaPhylogeographyEcosystemPiceaRNA, Ribosomal, 28SGenome, MitochondrialPlant BarkXylemClassificationBeetlesFungiCaryaGene Transfer, HorizontalQuercusLigninGenome, PlantHymenoptera
GenusTaedaTaxonomyTaxonomic revisionMolecularNigraPonderosaPinaceaeLaricioPhylogeneticSubsectionGenomicParvifloraCycadSubgenusFujiiiBanksianaYunnanensisMitochondrialNorth AmericaGenomeCalabrianEcosystemsPinesStrobusHabitat associationsEcologicalExamplesConeConesStone pineKoreanStudiesInteractionsTreeMajorMountainForest
Genus9
  • Pinus, the pines, is a genus of approximately 111 extant tree and shrub species. (wikipedia.org)
  • The genus is currently split into two subgenera: subgenus Pinus (hard pines), and subgenus Strobus (soft pines). (wikipedia.org)
  • Older classifications split the genus into three subgenera - subgenus Pinus, subgenus Strobus, and subgenus Ducampopinus (pinyon, bristlecone and lacebark pines) - based on cone, seed and leaf characteristics. (wikipedia.org)
  • Wilt of loblolly pine inoculated with blue-stain fungi of the genus Ceratocystis. (afs-journal.org)
  • Stone pines used to be confidently included in a subsection of the genus Pinus called Cembrae, included in the subgenus Strobus, which contains almost all of the 'soft' pines with needles contained in bundles of five, as in the case of whitebark pine. (mostlynaturalgrizzlies.org)
  • The genus Pinus . (fungalpedia.org)
  • BSc thesis: Nuclear phylogeny of the Caribbean genus Spathelia (Rutaceae). (uni-goettingen.de)
  • MSc thesis: Phylogeny of the genus Acronychia (Rutaceae). (uni-goettingen.de)
  • Extant pines of subsection Pinus (section Pinus, genus Pinus, Pinaceae) are predominantly distributed in Eastern Asia. (researchgate.net)
Taeda1
Taxonomy2
  • The BIONJ algorithm results in phylogenies most in accordance with the current NCBI taxonomy, with NJ and FastME performing insignificantly worse, and STC performing as well if applied to high quality distance matrices. (biomedcentral.com)
  • Taxonomy, phylogeny and population biology of the red-band needle blight pathogens. (up.ac.za)
Taxonomic revision1
  • Phylogeny, species-limits and taxonomic revision of Otalini (Helicidae) from North-West Africa. (systbiogen.com)
Molecular4
  • Molecular phylogenies of many taxonomic groups are based on analyses of single loci. (biomedcentral.com)
  • Molecular Phylogeny Analysis, Part I. av M Kato · 2003 · Citerat av 139 - Phylogenetic analysis of nucleotide and amino acid sequence data often requires alignment of homologous sequences that vary in length. (netlify.app)
  • Postdoc Project: Molecular phylogeny of Vetrix-Chamaetia clade (Salix, Salicaceae), with an emphasis on Chinese species. (uni-goettingen.de)
  • Molecular phylogeny of the land snail subfamily Leptaxinae (Gastropoda: Hygromiidae). (systbiogen.com)
Nigra5
  • Diterpene resin acids and olefins in calabrian pine (Pinus nigra subsp. (unirc.it)
  • A quali-quantitative analysis of diterpenoid composition in tissues obtained from different organs of Pinus nigra subsp. (unirc.it)
  • Pinus nigra subsp. (unirc.it)
  • In preceding functions of ours [20,26], we started to achieve insight in to the PI3Kγ custom synthesis ecological and functional roles of the terpenes produced by the non-model conifer Pinus nigra subsp. (trpv1inhibitor.com)
  • laricio (Poiret) (Calabrian pine), on the list of six subspecies of P. nigra (black pine) and an insofar entirely neglected species beneath such respect. (trpv1inhibitor.com)
Ponderosa1
  • We also examined the geographic variability in phyllosphere communities on Pinus ponderosa from several locations across the globe. (bvsalud.org)
Pinaceae1
  • Pinus trifolia Miki 1939 (Pinaceae) was originally proposed based on seed cones from the upper Miocene of Aichi and Gifu Prefectures, central Japan. (researchgate.net)
Laricio2
  • laricio (Poiret) Maire (Calabrian pine) was carried out. (unirc.it)
  • When it comes to natural distribution, black pine is one of the most P2Y Receptor Antagonist Biological Activity broadly distributed conifers over the whole Mediterranean basin, and its laricio subspecies is thought of endemic of southern Italy, particularly of Calabria, where it is a basic element on the forest landscape, playing key roles not merely in soil conservation and watershed protection, but in addition in the neighborhood forest economy [27]. (trpv1inhibitor.com)
Phylogenetic4
  • Here, we extend the recently described Genome BLAST Distance Phylogeny (GBDP) strategy to compute phylogenetic trees from all completely sequenced plastid genomes currently available and from a selection of mitochondrial genomes representing the major eukaryotic lineages. (biomedcentral.com)
  • Nowadays, an increasing number of completely sequenced genomes are available and a growing field of phylogenetic research deals with the question of how to infer reliable phylogenies from this large amount of data to overcome the limitations of single-gene phylogenies. (biomedcentral.com)
  • As a result, gaps are Przejrzyj Fylogeni - w 2021 roku kolekcjalub zobacz powiązane: Phylogeny of Phylogenetic tree Phylogeny refers to Phylogeny example お隣速報 Rschlott av RH PINE · 2013 · Citerat av 12 - Solari (2007), for example, assessed the phylogenetic relationships using tree bisection-reconnection (TBR) branch-swapping in each of 100 A phylogenetic analysis of Antrodia s.l. based on nrDNA ITS Trne Magazines. (netlify.app)
  • Send sequences to Phylogeny.fr Web site in order to generate a phylogenetic tree. (inra.fr)
Subsection2
  • Subsection Incertae sedis †P. driftwoodensis - Early Eocene, British Columbia, Canada All but two species (P. resinosa and P. tropicalis) in Subsection Pinus are native to Eurasia. (wikipedia.org)
  • We reviewed fossil records of subsection Pinus from Japan and collected permineralized materials, in which anatomical details are preserved for be. (researchgate.net)
Genomic2
  • GBDP-like methods can be used to reliably infer phylogenies from different kinds of genomic data. (biomedcentral.com)
  • The isolation of the complete genomic sequences and the determination of their exon/intron structures allowed us to place the diterpene synthase genes from Calabrian pine on the background of current ideas on the functional evolution of diterpene synthases in Gymnosperms. (unirc.it)
Parviflora1
  • By contrast, whitebark pine has been placed in a bin with species such as the Himalayan P. parviflora and Sierra Nevadan P. lambertiana , AKA sugar pine. (mostlynaturalgrizzlies.org)
Cycad1
Subgenus4
  • DNA phylogeny has shown that species formerly in subgenus Ducampopinus are members of subgenus Strobus, so Ducampopinus is no longer used. (wikipedia.org)
  • In 1888 the Californian botanist John Gill Lemmon placed them in subgenus Pinus. (wikipedia.org)
  • Pines with one fibrovascular bundle per leaf, (the former subgenera Strobus and Ducampopinus) were known as haploxylon pines, while pines with two fibrovascular bundles per leaf, (subgenus Pinus) were called diploxylon pines. (wikipedia.org)
  • Subgenus Pinus includes the yellow and hard pines. (wikipedia.org)
Fujiii1
  • However, before the publication of P. trifolia, a different name (Pinus fujiii (Yasui) Miki) was given to a female cone with the same morphology. (researchgate.net)
Banksiana1
  • Interestingly, class-I DTPSs involved in specialized diterpenoid metabolism were identified in Pinus contorta and Pinus banksiana, which can convert (+)-CPP created by bifunctional DTPSs to form pimarane-type diterpenes [22], even though no (+)-CPP making class-II DTPSs have already been identified in other conifers. (trpv1inhibitor.com)
Yunnanensis1
  • In this study, we analyzed the response of nine variables related to four ecosystem functions (i.e. nutrient cycling, soil carbon stocks, decomposition, and wood production) to five selective logging intensities in a Pinus yunnanensis -dominated forest. (springeropen.com)
Mitochondrial1
  • Our results indicate that, at this taxonomic level, plastid genomes are much more valuable for inferring phylogenies than are mitochondrial genomes, and that distances based on breakpoints are of little use. (biomedcentral.com)
North America1
  • Dr. Dominick played a central role in reevaluating the phylogeny of moth species in North America. (ecdysis.org)
Genome1
  • In our novel approach, we create the phylogeny based on all the genes in a genome, and then use the phylogeny to identify which genes provide positive support for the divergence of species. (nyu.edu)
Calabrian2
  • A phylogeny-based approach allowed us to isolate four cDNAs coding for diterpene synthases in Calabrian pine, each of which belonging to one of the four groups into which the d3 clade of the plants' terpene synthases family can be divided. (unirc.it)
  • The deduced amino acid sequences allowed predicting that both monofunctional and bifunctional diterpene synthases are involved in the biosynthesis of diterpene resin acids in Calabrian pine. (unirc.it)
Ecosystems1
  • Mesanza N, Barnes I , van der Nest A , Raposo R, Berbegal M, Iturritxa E. (2023) Genetic diversity of Lecanosticta acicola in Pinus ecosystems in Northern Spain . (up.ac.za)
Pines7
  • P. brutia - Turkish pine P. canariensis - Canary Island pine P. halepensis - Aleppo pine P. heldreichii - Bosnian pine P. pinaster - maritime pine P. pinea - stone pine P. roxburghii - chir pine Section Trifoliae (American hard pines), despite its name (which means "three-leaved"), has two to five needles per fascicle, or rarely eight. (wikipedia.org)
  • Phylogeny aside, all of the stone pines share an ecological niche and distinct morphologic similarities. (mostlynaturalgrizzlies.org)
  • Stone pine seeds are much larger than seeds of most other conifers, and comparable in size to those of pinyon pines (e.g. (mostlynaturalgrizzlies.org)
  • Moreover, whitebark pine seeds, like those of other stone pines, are rich in fat. (mostlynaturalgrizzlies.org)
  • The scale of pine seed consumption by bears is far-and-away greatest in Asia, where the overlap between distributions of bears and stone pines is huge. (mostlynaturalgrizzlies.org)
  • Pretty much everywhere within the joint overlap of bears and stone pines in Asia that has been examined by naturalists, bears eat pine seeds, sometimes in enormous quantities. (mostlynaturalgrizzlies.org)
  • The patchy distribution of stone pines in Europe is comprised of Swiss stone pine, a denizen of the Alps and Carpathian Mountains. (mostlynaturalgrizzlies.org)
Strobus1
  • The current division into two subgenera (Pinus and Strobus) is supported with rigorous genetic evidence. (wikipedia.org)
Habitat associations1
  • We examined physical characteristics and habitat associations of Gopher Tortoise burrows in pine rockland natural preserves in the highly urbanized Miami-Dade County (Florida, USA). (bioone.org)
Ecological2
  • Methods Adopting statistical methods including the linear regression model and the multiple regression method of Mantel test, we compared the phylogeny and ecological behaviors of the two plant groups in eight forest dynamics plots in China. (plant-ecology.com)
  • The findings show that EBLs and DBLs of the eight study plots differ in both phylogeny and ecological behaviors, and imply that niche separation may be a major mechanism that maintains the biodiversity of subtropical broad-leaved forests. (plant-ecology.com)
Examples1
Cone1
  • The species span from the flowering variety-peanuts and dandelions, for example-to non-flowering cone plants like spruce and pine. (nyu.edu)
Cones1
  • Moreover, research by Frank Forcella and Tad Weaver suggests that this large mass of individual seeds results into a unit area availability (i.e., grams per square meter per year) that exceeds that of other conifers by 10-30 fold, despite the fact that whitebark pine produces fewer cones than most other conifers. (mostlynaturalgrizzlies.org)
Stone pine3
  • The origin and meaning of 'stone pine' is not clear, but it could either refer to the nature of the seeds or, more likely, the often harsh and unforgiving habitats occupied by most of these species. (mostlynaturalgrizzlies.org)
  • Bears eat stone pine seeds pretty much everywhere they have access to them. (mostlynaturalgrizzlies.org)
  • Dark green corresponds to the distribution of Siberian stone pine. (mostlynaturalgrizzlies.org)
Korean1
  • P. densata - Sikang pine P. densiflora - Korean red pine P. henryi - Henry's pine P. hwangshanensis - Huangshan pine P. kesiya - Khasi pine P. latteri? (wikipedia.org)
Studies1
  • Multiple studies show fat content of whitebark pine seeds averaging roughly 22 to 30%, which makes this food one of the fattiest in the northern Rocky Mountains, along with army cutworm moths and elk and bison at the end of summer. (mostlynaturalgrizzlies.org)
Interactions1
  • Competition and coexistence in a multi-partner mutualism: interactions between two fungal symbionts of the mountain pine beetle in beetle-attacked trees. (afs-journal.org)
Tree3
  • Its symbiotic association with not only Eucalyptus but also with Pinus , Quercus, and other coniferous and broad-leaved tree species has been confirmed experimentally later ( Marx & Bryan 1970 , Ashton 1976 , Marx 1977 , Gibson 1979 ). (fungalpedia.org)
  • For example, the K-mer Based Tree Construction tool Phylogeny of chlamydial enoyl-acyl carrier protein reductase as an example of horizontal transfer. (netlify.app)
  • The bacterial communities were organized in patterns predictable from the relatedness of the trees as there was significant correspondence between tree phylogeny and bacterial community phylogeny. (bvsalud.org)
Major1
  • In addition, the various shades of green and yellow denote the extent to which bears are known to eat pine seeds in a given region, with darkest-green corresponding to areas where pine seeds are a major food, and yellow where consumption of pine seeds is trivial. (mostlynaturalgrizzlies.org)
Mountain1
  • Theoretical explanation of mountain pine betle dynamics in lodgepole pine forests. (afs-journal.org)
Forest1
  • The Wedge is a former rice plantation, located 5 miles north of McClellanville, South Carolina, and consisting of a mixed habitat of impounded rice fields, cypress swamps and a mixed pine-hardwood forest including live oaks and giant Magnolias. (ecdysis.org)