• This report describes the genome sequences of Mannheimia haemolytica, serotype A2 isolated from pneumonic lungs of two different ruminant species, one from Ovis aries, designated as Ovine (O) and the other from Bos taurus, designated as Bovine (B). (usda.gov)
  • The main focus of this research is to determine the molecular phylogeny and characterization of Mundri Sheep ( Ovis aries ) through sequencing of mitochondrial Cytochrome b and Cytochrome Oxidase Subunit I (COI). (veterinarska-stanica-journal.hr)
  • The phylogeny analysis categorized Ovis aries including Mundri sheep into three and two groups for Cytochrome b and COI genes respectively. (veterinarska-stanica-journal.hr)
  • Although there exists controversy and uncertainty regarding the origin of sheep ( Ovis aries ) evidence shows that, sheep were probably first domesticated in the Fertile Crescent region of the Near East about 11,000 years ago. (veterinarska-stanica-journal.hr)
  • Sheep ( Ovis aries ), is a well-known quadrupedal livestock animal. (veterinarska-stanica-journal.hr)
  • This directory contains alignments of the following assemblies: - target/reference: Opossum (monDom5, Oct. 2006 (Broad/monDom5), Broad Institute monDom5 (NCBI project 12561, accession AAFR03000000)) - query: Sheep (oviAri1, Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1), ISGC (NCBI project 10709, accession GCA_000005525.1)) Files included in this directory: - md5sum.txt: md5sum checksums for the files in this directory - monDom5.oviAri1.all.chain.gz: chained blastz alignments. (ucsc.edu)
  • China has a rich resource of native sheep (Ovis aries) breeds associated with historical movements of several nomadic societies. (landportal.org)
  • Survival of bighorn sheep (Ovis canadensis) commingled with domestic sheep (Ovis aries) in the absence of mycoplasma ovipneumoniae. (usda.gov)
  • In sheep, fleece variation discriminates ancestral species carrying a long and hairy fleece from modern domestic sheep ( Ovis aries ) owning a short and woolly fleece. (inrae.fr)
  • G- and R-banding comparison of sheep (Ovis aries L.) chromosomes. (cnr.it)
  • However, despite its importance the genetic mechanisms of litter size in domestic sheep (Ovis aries) are still poorly understood. (figshare.com)
  • sheep-w5p871 Ovis aries (Sheep). (inrae.fr)
  • Abhydrolase domain containing 16A , sheep-w5pji8 Ovis aries (Sheep). (inrae.fr)
  • Uncharacterized protein , sheep-w5p0x1 Ovis aries (Sheep). (inrae.fr)
  • sheep-cauxin Ovis aries (sheep) est5a est7 carboxylesterase-like urinary excreted protein cauxin , sheep-w5qa37 Ovis aries (Sheep). (inrae.fr)
  • sheep-w5qi65 Ovis aries (Sheep). (inrae.fr)
  • sheep-lipli Ovis aries lipoprotein lipase , sheep-r9wmv4 Ovis aries (Sheep). (inrae.fr)
  • Endothelial lipase , sheep-w5p1i2 Ovis aries (Sheep). (inrae.fr)
  • Pancreatic lipase , sheep-w5q5i2 Ovis aries (Sheep). (inrae.fr)
  • Phospholipase A1 member A , sheep-w5qh96 Ovis aries (Sheep). (inrae.fr)
  • Lipase H , sheep-w5q4p1 Ovis aries (Sheep). (inrae.fr)
  • This list of sequenced animal genomes contains animal species for which complete genome sequences have been assembled, annotated and published. (wikipedia.org)
  • Substantially complete draft genomes are included, but not partial genome sequences or organelle-only sequences. (wikipedia.org)
  • We describe whole-genome sequences of 2 A. capra strains from metagenomic sequencing of purified erythrocytes from infected goats in China. (cdc.gov)
  • Until recently, however, assembled genome sequences of gymnosperms have been missing from this picture. (nau.edu)
  • These genome sequences revealed distinctive features compared with other plant genomes and may represent a window into the past of seed plant genomes. (nau.edu)
  • Since the A. marginale genome sequence was reported in 2005 ( 22 ), a total of 24 A. marginale genomes ( 23 ), 32 A. phagocytophilum genomes ( 24 , 25 ), 1 A. centrale genome ( 26 ), 2 A. ovis genomes ( 27 ), and 1 A. platys genome ( 28 ) have been sequenced and deposited in GenBank. (cdc.gov)
  • For the future direction, we need the in-depth genome sequence information and analysis for most of the mammals, including human to fully understand genome variation of economic traits, genetic susceptibility to diseases, and pharmacogenomics of drug response. (springer.com)
  • ud \ud Methods and Results: We aligned expressed sequence tags (ESTs) from Ceratodon purpureus to the Physcomitrella patens genome sequence, and designed primers that are homologous to … Here we examine the genetic and genome size diversity in Mediterranean populations of the moss Ceratodon purpureus s.l. (oosteinde.info)
  • Draft whole-genome sequence of Streptomyces caniferus CA-271066: A producer of new and known natural products. (medinadiscovery.com)
  • Identification of the kocurin biosynthetic pathway from the draft whole genome sequence of the producer Kocuria palustris CA-276345. (medinadiscovery.com)
  • Complete, circular genome sequence of a Bosea sp. (dtu.dk)
  • 2002. The genome sequence of the facultative intracellular pathogen Brucella melitensis . (mgc.ac.cn)
  • 2005. Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis . (mgc.ac.cn)
  • 2008. Genome sequence of Brucella abortus vaccine strain S19 compared to virulent strains yields candidate virulence genes. (mgc.ac.cn)
  • In order to obtain the sequence of an entire genome, reads need to be either stitched together (assembled) in a de novo fashion when the genome of the organism is unknown in advance, or mapped and aligned to the reference genome if one exists (reference assembly or mapping). (nsk.hr)
  • With the ongoing developments of high throughput sequencing machines and advancement of modern bioinformatics tools at unprecedented pace, the target goal of sequencing individual genomes of living organism at a cost of $1,000 each is seemed to be realistically feasible in the near future. (springer.com)
  • The completion of the first human genome drafts (Yamey 2000 ) was just a start of the modern DNA sequencing era which resulted in further invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the " high-throughput next generation sequencing " (HT-NGS). (springer.com)
  • During this period, tremendous success has been achieved in the fields of decoding of human genome, technological advancement of new era of human genome applications, toward personalized genomes and discovery of rare variants, leveraging genome sequencing to impact on cancer researches and mammalian evolution and population structure. (springer.com)
  • Despite their ecological and economic importance, conifers seemed long out of reach for complete genome sequencing, due in part to their enormous genome size (20-30 Gb) and the highly repetitive nature of their genomes. (nau.edu)
  • Technological advances in genome sequencing and assembly enabled the recent publication of three conifer genomes: white spruce (Picea glauca), Norway spruce (Picea abies), and loblolly pine (Pinus taeda). (nau.edu)
  • By sequencing the fire moss genome, researchers hope to identify genes that provide tolerance to high levels of heavy metal contamination. (oosteinde.info)
  • Sequencing the genome of the moss Ceratodon purpureus, a well-established developmental model with abundant natural genetic variation in morphological and developmental traits, to advance gene discovery and phylogenomic comparisons. (oosteinde.info)
  • The Department of Energy Joint Genome Institute has begun sequencing both a male (R40) and a female (GG1) laboratory isolate of the species. (oosteinde.info)
  • Objective】 Through genome sequencing and bioinformatics analysis of GD2107 strain of multi-drug resistant Actinobacillus pleuropneumoniae (APP),the genome database information of APP was enriched,the phylogenetic tree based on Apx Ⅳ gene was constructed,and the evolutionary relationship of the strain was analyzed,so as to provide reference for exploring the pathogenic mechanism of APP and clinical prevention and control of porcine infectious porcine contagious pleuropneumia (PCP). (chvm.net)
  • The whole genome of bacterial DNA was sequenced by whole genome sequencing (WGS) method.Based on Illumina NovaSeq and PacBio SequeI sequencing platforms,the whole genome sequencing results were analyzed by gene function annotation and bioinformatics analysis (including basic genome information,functional element analysis and subsystem analysis,etc. (chvm.net)
  • Conclusion】 In this study, we completed the whole genome sequencing and bioinformatics analysis of the multi-drug resistant strain GD2107, fully understood the structure and function of the genome of the strain, and explored the related genes in drug resistance and pathogenic mechanism. (chvm.net)
  • Whole Genome Sequencing and Biological Characteristics Analysis of Multidrug-resistant Actinobacillus pleuropneumoniae GD2107 Strain[J]. China Animal Husbandry and Veterinary Medicine, 2022, 49(10): 4019-4031. (chvm.net)
  • Algorithms for de novo genome assembly from third generation sequencing data (Doctoral thesis). (nsk.hr)
  • I. Sović, "Algorithms for de novo genome assembly from third generation sequencing data", Doctoral thesis, University of Zagreb, Faculty of Electrical Engineering and Computing, Zagreb, 2016. (nsk.hr)
  • During the past ten years, genome sequencing has been an extremely hot and active topic, with an especial momentum happening right now. (nsk.hr)
  • Sequencing the entire genome of an organism is a difficult problem, because all sequencing technologies to date have limitations on the length of the molecule that they can read (much smaller than the genomes of a vast majority of organisms). (nsk.hr)
  • The genomes of the 2 A. capra strains contained comparable G+C content and numbers of pseudogenes with intraerythrocytic Anaplasma species. (cdc.gov)
  • Urial ( Ovis vignei ) is one of the closest related species of all modern sheep, found primarily in the mountainous area of Central Asia. (veterinarska-stanica-journal.hr)
  • monDom5.oviAri1.net.gz: "net" file that describes rearrangements between the species and the best Sheep match to any part of the Opossum genome. (ucsc.edu)
  • Genome-wide identification of the mutation underlying fleece variation and discriminating ancestral hairy species from modern woolly sheep. (inrae.fr)
  • Since eradication and serological surveillance of the zoonotic species are priorities, Rev 1 is banned once B. melitensis is eradicated or where it never existed, hampering B. ovis control and eradication. (biomedcentral.com)
  • Since these vaccinal antibodies encumber B. melitensis eradication and surveillance and this zoonotic species is a priority, Rev 1 is banned after B. melitensis eradication, and the same reasons make Rev 1 unsuitable for use in B. melitensis -free countries but yet affected by B. ovis . (biomedcentral.com)
  • The genus Brucella consists of six classic species, designated on the basis of host preference, antigenic and biochemical characteristics as Brucella melitensis (goats and sheep), Brucella abortus (cattle), Brucella suis (pigs), Brucella canis (dogs), Brucella ovis (sheep) and Brucella neotomae (wood rats). (mgc.ac.cn)
  • Brucella melitensis and Brucella ovis are gram-negative pathogens of sheep that cause severe economic losses and, although B. ovis is non-zoonotic, B. melitensis is the main cause of human brucellosis. (biomedcentral.com)
  • 2002. The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts. (mgc.ac.cn)
  • G3: Genes, Genomes, Genetics. (wikipedia.org)
  • 2006).However, progress toward identifying genes underlying traits of interest in C. purpureus is limited (C ove et al. (oosteinde.info)
  • identifying useful genes sustaining beef and dairy milk production, genome wide selection approaches and detecting the effects of diet and nutrients on gene expression in animal models. (cf.ac.uk)
  • DAVID was used to perform the Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis for the different expression genes (DEGs). (medscimonit.com)
  • To explore genetic mechanisms underlying the variation in litter size, we conducted multiple independent genome-wide association studies in five sheep breeds of high prolificacy (Wadi, Hu, Icelandic, Finnsheep, and Romanov) and one low prolificacy (Texel) using the Ovine Infinium HD BeadChip, respectively. (figshare.com)
  • axtNet/*.monDom5.oviAri1.net.axt.gz: chained and netted alignments, i.e. the best chains in the Opossum genome, with gaps in the best chains filled in by next-best chains where possible. (ucsc.edu)
  • Gerring ZF, McRae AF , Montgomery GW, Nyholt DR (2018) Genome-wide DNA methylation profiling in whole blood reveals epigenetic signatures associated with migraine. (allanmcrae.com)
  • We conducted genome-wide association studies of Horvath-EAA and Hannum-EAA in 13,493 unrelated individuals of European ancestry, to elucidate genetic determinants of differential epigenetic ageing. (prolekarniky.cz)
  • Premise of the study: We developed and tested primers for 218 nuclear loci for studying population genetics, phylogeography, and genome evolution in bryophytes. (oosteinde.info)
  • From a mapping population of 288 recombinant haploid gametophytes, genotyped at 121 polymorphic AFLP loci, three gene-based … The forthcoming C. purpureus genome will build on these existing resources and enable us to answer definitively many questions regarding the evolution of land plant gene families, genome structure, and the genetic basis of adaptive variation. (oosteinde.info)
  • Copy number variation (CNV) is one of these variations in genome including insertion, deletion and duplication of 1 kb to 1 Mb segment with more than 90% similarity. (ac.ir)
  • In mammals, it is important source of variability in genomes and it contains 0.4-25% of whole genome variation. (ac.ir)
  • The 2018 Otto Aufranc Award: How Does Genome-wide Variation Affect Osteolysis Risk After THA? (coxa.fi)
  • Specifically, in WP4 the team will extend current methodologies to compile and facilitate analysis of the medium and high density SNP array, whole genome and transcriptome data available. (cf.ac.uk)
  • Although A. capra has been extensively detected in ticks and animal hosts worldwide, no genome of the emerging pathogen has been determined so far, which has hindered us from better understanding its genetic features and pathogenesis. (cdc.gov)
  • Nevertheless, the only vaccine available for the immunoprophylaxis of B. melitensis and B. ovis is B. melitensis Rev 1, a live-attenuated S strain that elicits antibodies to the O-PS that interfere in B. melitensis serodiagnostic tests. (biomedcentral.com)
  • Strikingly, the effective population carried a significantly lower level of genome-wide inbreeding coefficients and autozygosity with shorter decays for linkage disequilibrium relative to the non-breeding population. (biorxiv.org)
  • book berrymans shakespeare 2001 of an Therapy from the trait density kit, Psoroptes ovis, possible with target T genome marker basis coefficients. (naturheilpraxis-gisbert-fussek.de)
  • B. melitensis carries a smooth (S) lipopolysaccharide (LPS) with an N-formyl-perosamine O-polysaccharide (O-PS) that is absent in the rough LPS of B. ovis . (biomedcentral.com)
  • Thus, H38Δ wbkF is an interesting candidate for the immunoprophylaxis of B. ovis in B. melitensis -free areas. (biomedcentral.com)
  • While some countries have eradicated B. melitensis through the combined use of vaccination and test and slaughter programs [ 7 , 8 ], none has eradicated B. ovis . (biomedcentral.com)
  • The amount of DNA in a genome, known as genome size or C value, varies greatly across living organisms and is known to correlate with a number of phenotypic traits, most notably cell size (e.g. (oosteinde.info)
  • Advances in molecular biology and genome analysis now also allow for detailed descriptions of DNA-binding transcription factors and transcriptional regulatory networks. (medscape.com)
  • 2005. Whole-genome analyses of speciation events in pathogenic Brucellae . (mgc.ac.cn)
  • Insights from sequenced genomes of major land plant lineages have advanced research in almost every aspect of plant biology. (nau.edu)
  • We found over 87% of the pedigree foundation genomes persisted and report influxes of allelic diversity from two translocated wolves from a divergent source in Montana. (biorxiv.org)
  • 2010 ). These non-coding elements can have various regulatory functions within the genome, such as interacting with transcription factors (TFs), miRNA, creating splice sites and acting as exonic splicing enhancers (ESEs) (Birney et al. (springeropen.com)
  • After confirming their attenuation and protection against B. ovis in mice, were tested in rams for efficacy. (biomedcentral.com)
  • This Update highlights recent advances, remaining challenges, and opportunities in light of the publication of the first conifer and gymnosperm genomes. (nau.edu)
  • The main problem in both approaches stems from the repeating regions in the genomes which, if longer than the reads, prevent complete assembly of the genome. (nsk.hr)