• These MPB faculty are also active participants in the Center for Structural Biology, the Vanderbilt Institute for Imaging Science, the Cell Imaging Shared Resource, and the Molecular Biophysics Training Program. (vanderbilt.edu)
  • The Center for Molecular Protein Science (CMPS) brings together scientists active within the fields of biochemistry, molecular biophysics, structural biology, and physical and theoretical chemistry. (lu.se)
  • Cambridge) Christopher Dobson (University of Cambridge) Structural Genomics: Udo Heinemann (Max-Delbrueck-Centrum, Berlin) Janet Thornton (EMBL-EBI, Cambridge) Robert Konrat (University of Vienna) Stephen Burley (Structural GenomiX, Inc.) Free Electron Lasers in Structural Biology: Janos Hajdu (Uppsala University) Hodgson (Stanford University) Participation Fees: Early Fee (before 1st August 2003) Regular. (bio.net)
  • The Structural Genomics Consortium (SGC) is a public-private-partnership focusing on elucidating the functions and disease relevance of all proteins encoded by the human genome, with an emphasis on those that are relatively understudied. (wikipedia.org)
  • The CDC-authored Genomics and Precision Health Publications Database (GPHPD) has more than 3,600 publications, most of which are in pathogen genomics and advanced molecular detection. (cdc.gov)
  • The structural and functional characterization of molecules (isolated or combined in complexes), along with the quantification, modeling and prediction of biological phenomena, requires multidisciplinary research to be conducted involving biology, physics, chemistry, bioinformatics and mathematics. (aviesan.fr)
  • In the context of the United States' National Institutes countries of Health Roadmap for medical research, an initiative through public-private has been created to develop molecular libraries in order collaboration to facilitate the identification of drug targets and screening of compounds, to focus on structural biology, and to promote the development of bioinformatics, computational biology and nanomedicine. (who.int)
  • Better understanding of the cellular and molecular pathophysiological mechanisms regulating adipocyte size, number and depot-dependent expansion has become a focus of interest over recent decades. (springer.com)
  • In our research we use a mass spectrometry-based integrative structural biology toolkit, and a combination of other biochemical and biophysical techniques, to elucidate the functional mechanisms of protein complexes, and characterise dynamic and transient assemblies involved in essential cellular functions, cellular organisation and disease. (leeds.ac.uk)
  • A detailed understanding of the molecular details of interactions between nanoparticle s and biological nano-machinery - macromolecules, membranes, and intracellular organelles - is crucial for obtaining adequate information on mechanisms of action of nanomaterial s as well as a perspective on the long term effects of these materials and their possible toxicological outcomes. (cdc.gov)
  • We want to understand the molecular mechanisms of biological processes by exploring the structure, dynamics, interactions and function of proteins. (lu.se)
  • Structural biology of human proteins - The SGC has so far contributed over 2000 protein structures of human proteins of potential relevance for drug discovery into the public domain since 2003. (wikipedia.org)
  • We use mass spectrometry based methods to understand the structure, dynamics and interactions of the non-structural proteins that mediate viral factory assembly, using non-structural proteins from Rotavirus as a model system. (leeds.ac.uk)
  • The polyprotein is co- and post-transla- as virus isolation-positive and, together with the culture super- tionally cleaved to yield four structural proteins: VP4, VP2, natant, were harvested and stored at -80°C before use. (cdc.gov)
  • Table 1 lists the major structural proteins coded for by the HIV genome. (cdc.gov)
  • Our research focuses on major areas of modern biochemistry and molecular biology. (lu.se)
  • We use state-of-the-art facilities in X-ray crystallography, NMR spectroscopy, mass spectrometry, cryo-electron microscopy, imaging, biophysical and biochemical analysis, molecular and cell biology. (ucl.ac.uk)
  • Biophysical approaches to obtain 'images' of molecular functioning and "see" the living organism more clearly. (aviesan.fr)
  • By integrating data principally from state-of-the-art structural-MS and combining it with other functional, biochemical and biophysical methods we aim to establish the molecular principles of LLPS in neurodegeneration, unravelling how structural dynamics and RNA interactions mediate LLPS. (leeds.ac.uk)
  • CMPS is a highly integrated center comprising the divisions of Biochemistry and Structural Biology (Faculty of Science) and Biophysical Chemistry (Faculty of Engineering, LTH). (lu.se)
  • By combining cryo-electron microscopy (cryo-EM) with in vitro reconstitution and molecular dynamics simulations, we show how actin filaments release P i through a 'molecular backdoor' and demonstrate that this arrangement is distorted in a disease-linked actin variant. (nature.com)
  • Doing so we characterize the shock driven bcc-to-hcp structural transition along with the corresponding ferro-to-paramagnetic transition which is directly observed in the simulations within the spin subsystem. (aps.org)
  • Her research interests are focused on first principles based simulations on the structural, magnetic and electronic properties of dilute magnetic semiconductors, rare earth nitrides, 2D chalcogenides and molecular dynamics studies of hybrid organic-inorganic halide perovskites for photovoltaic applications. (aus.edu)
  • Molecular dynamics (MD) simulations describe the mechanical behaviors of molecular systems through empirical approximations of interatomic potentials. (openreview.net)
  • Integrative structural biology and structural proteomics. (leeds.ac.uk)
  • Structural and biochemical characterization of two heme binding sites on α1-microglobulin using site directed mutagenesis and molecular simulation. (lu.se)
  • Metabolic myopathies are the most clearly defined and etiologically understood muscle disorders because their fundamental biochemical defects are known through recent molecular biology and biochemistry developments. (medscape.com)
  • Thank you for sharing this Molecular Pharmacology article. (aspetjournals.org)
  • Message Body (Your Name) thought you would be interested in this article in Molecular Pharmacology. (aspetjournals.org)
  • Ryan is a PhD student on the Wellcome Trust Institute of Structural and Molecular Biology (ISMB) training programme. (ucl.ac.uk)
  • UCL and the Department of Biological Sciences at Birkbeck created the Institute for Structural Biology (ISMB), one of the largest research centres for research in multidisciplinary research around structural biology in the world. (ucl.ac.uk)
  • Akabas, MH 2013, ' Using molecular dynamics to elucidate the structural basis for function in pLGICs ', Proceedings of the National Academy of Sciences of the United States of America , vol. 110, no. 42, pp. 16700-16701. (elsevierpure.com)
  • One of the key challenges in structural biology is to elucidate how the dynamic interactome mediates biological function in the crowded cellular milieu. (leeds.ac.uk)
  • Structural studies on bioactive compounds. (rcsb.org)
  • In other words, computational systems biology needs to be paralleled by a quantitative description at the molecular level. (univr.it)
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  • By combining quantitative transcriptomics and immunohistochemistry, we systematically identify the cellular origin, molecular identity and tissue distribution of extracellular matrix molecules in mouse hair follicles, and reveal that BM composition and architecture are exquisitely specialized for distinct inter-tissue interactions, including epidermal-fibroblast, epidermal-muscle and epidermal-nerve interactions. (biorxiv.org)
  • Structural mechanism of molecular motors. (berkeley.edu)
  • However, the molecular mechanism of viral factory assembly, and their precise role in virus replication remain unexplained. (leeds.ac.uk)
  • This presentation will highlight the unprecedented predictive capability enabled for magnetic materials from atomistic molecular dynamics which is underpinned by advances in machine learned interatomic potentials. (aps.org)
  • The challenges are at once scientific, medical and technological with, for example, the development of new molecular and subcellular imaging methods. (aviesan.fr)
  • Here, we report on the use of stochastic optical reconstruction microscopy to study the molecular exchange of peptide amphiphile nanofibres, supramolecular systems known to have important biomedical functions. (kcl.ac.uk)
  • Similar order-disorder transitions were also triggered by chemical pressure induced by removing crystalline solvent molecules in the single-crystal state or by substituting the countercation to change the molecular packing. (elsevierpure.com)
  • Structural mass spectrometry methods are unique in their ability to study the weak and transient interactions that underlie many biological processes in complex systems, regardless of their size, revolutionising our understanding of dynamic assemblies that are not amenable to other structural methods. (leeds.ac.uk)
  • Recently, structural MS methods have been shown to be promising tools to achieve this endeavour, including XL-MS and in-cell FPOP, yielding unprecedented insights into the structure and organisation of cellular macromolecular assemblies. (leeds.ac.uk)
  • We review major approaches and provide examples of computational analysis of the structural principles behind such interactions. (cdc.gov)
  • The molecular and crystalline structure changes, thermal properties, and SCFA content of RS3 obtained from debranched starch were investigated in simulated salivary, gastric, and intestinal digestion systems. (bvsalud.org)
  • For ferromagnetic materials like iron which exhibit strong spin-lattice interactions, magnetic fluctuations have a significant impact on the underlying mechanical, thermal, and structural material properties. (aps.org)
  • Although the basement membrane (BM) is located at tissue interfaces, its mode of action in inter-tissue interactions remains poorly understood, mainly because the molecular and structural details of the BM at distinct inter-tissue interfaces remain unclear. (biorxiv.org)
  • These experiences allowed me to broaden my knowledge and skills in structural biology and protein-protein interactions. (nki.nl)
  • In this paper, we propose a structural causal molecular dynamics model (SCMD), the first causality-based framework to model interatomic and dynamical interactions in molecular systems by inferring causal relationships among atoms from observational data. (openreview.net)
  • Molecular modeling in structural nano-toxicology: interactions of nano-particles with nano-machinery of cells. (cdc.gov)
  • This review focuses on the use of structure-based computational molecular modeling as a tool to understand and to predict the interactions between nanomaterial s and nano-biosystems. (cdc.gov)
  • We demonstrate the efficacy of SCMD through empirical validations on the complex molecular system (i.e., single-chain coarse-grained polymers in implicit solvent) for long-duration simulation and dynamical property prediction. (openreview.net)
  • Pharmaceutical research has successfully incorporated a wealth of molecular modeling methods, within a variety of drug discovery programs, to study complex biological and chemical systems. (mdpi.com)
  • Broadly used in modern drug design, molecular docking methods explore the ligand conformations adopted within the binding sites of macromolecular targets. (mdpi.com)
  • Development of in cell structural MS methods. (leeds.ac.uk)
  • To this purpose, experimental and computational methods are combined to study the best structural conditions that give optimal magnetic properties. (uni-goettingen.de)
  • Methods for immune sera against coxsackie virus A10 (CAV10), CAV16, molecular classification of HEVs should not only identify the and HEV71, respectively. (cdc.gov)
  • Ultimately, therefore, understanding of these events, requires the integration of detailed molecular information into the study of biological complexes. (univr.it)
  • Faculty of this division also participate in interdepartmental programs in structural biology, chemical biology, microbiology and toxicology. (berkeley.edu)
  • abstract = "The structural phase of a metal oxide changes with temperature and pressure. (elsevierpure.com)
  • He is focusing on understanding the structural basis of CaMKII targeting in the synapse. (ucl.ac.uk)
  • Structural basis for inhibition of histamine N-methyltransferase by diverse drugs. (bvsalud.org)
  • Computational approaches are keys for predictions of the molecular events involved in such cascades. (univr.it)
  • Increasing our knowledge of the molecular and structural bases of the living organism is only possible through combined approaches. (aviesan.fr)
  • Fine structural changes suggested that enzyme - resistant starch might form during digestion by the rearrangement of short amylose chains into enzyme -resistant structures with higher relative crystallinity. (bvsalud.org)
  • The Na + encapsulated in the discrete metal-oxide anion exhibited a reversible order-disorder transition with distortion of the Mo-O molecular framework induced by temperature. (elsevierpure.com)
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  • Substitution of a 6-membered by a 5-membered ring upper half in the light driven second generation molecular motors resulted in a dramatic increase of the speed of rotation. (rsc.org)
  • Subjects will also be excluded if MRI is contraindicated, if there is severe claustrophobia, if there are conditions that may confound brain imaging studies (e.g., structural abnormalities), or if they are medically unstable or are on medications that might affect brain structure or metabolism (e.g., chemotherapy). (mayo.edu)
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  • Molecular modeling to gather together data on the chemical, structural and dynamic properties of biomolecules. (aviesan.fr)
  • The magneto-structural correlations unveiled in this work should help steer further studies towards better performing SMMs. (uni-goettingen.de)
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  • Sindri is interested in molecular and systems neuroscience. (ucl.ac.uk)