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  • SNPs
  • We compare patterns of selection operating on IGRs using two independent methods: the proportion of singleton mutations and the d I / d S ratio, where d I is the number of intergenic SNPs per intergenic site. (genetics.org)
  • We present a method to assist in interpretation of the functional impact of intergenic disease-associated SNPs that is not limited to search strategies proximal to the SNP. (peerj.com)
  • region
  • The intergenic region (IG) transcriptional activity of Mycoplasma hyopneumoniae strain 232 was studied via two-color microarrays and quantitative real-time polymerase chain reactions (RT-qPCR). (iastate.edu)
  • Here we present the crystal structures of the ribosome-binding domain from a Dicistroviridae intergenic region IRES at 3.1 angstrom resolution, providing a view of the prefolded architecture of an all-RNA translation initiation apparatus. (rcsb.org)
  • The scpB-lmb intergenic region is a hot spot for integration of two mobile genetic elements (MGEs): the insertion element IS 1548 or the group II intron GBSi1. (pubmedcentralcanada.ca)
  • We studied the structure of scpB-lmb intergenic region in 111 GBS isolates belonging to the intraspecies major clonal complexes (CCs). (pubmedcentralcanada.ca)
  • In this study, we show that the intergenic promoter region in front of zrmABCD is a target for recurrent adaptive mutations during chronic infection of cystic fibrosis (CF) patients. (microbiologyresearch.org)
  • binding sites
  • B and C ) ChIP-qPCR data (HEPs) showing enrichment ( n = 3) for LDB1 complex members ( B ) and KLF1 ( C ) at the intergenic binding sites. (nih.gov)
  • Conclusion
  • Conclusion This is the first study that replicates in an independent cohort the association of the intergenic SNP rs10865331 with susceptibility to AS. (jrheum.org)
  • known
  • Two sequence motifs from intergenic ncRNAs with significant similarity against known DNA motifs.For each comparison, the upper one is the known DNA motif, and the lower one is the intergenic ncRNA sequence motif. (nih.gov)