Sequence AlignmentGenomeGenome, BacterialGenomicsSoftwareAlgorithmsComputer GraphicsSequence Analysis, DNAEvolution, MolecularPhylogenyComputational BiologyGenome, ViralConserved SequenceBase SequenceMolecular Sequence DataInternetGenome, HumanGenome, PlantGenome, MitochondrialSequence Analysis, ProteinGenome, FungalAmino Acid SequenceGenome SizeGenome, ArchaealGenome, InsectGenome, ProtozoanChromosome MappingSequence Homology, Amino AcidProteinsDatabases, ProteinDatabases, GeneticSequence Analysis, RNAGenome, ChloroplastModels, GeneticSequence Homology, Nucleic AcidStructural Homology, ProteinBone MalalignmentUser-Computer InterfaceOpen Reading FramesSyntenyGenetic VariationModels, MolecularDatabases, Nucleic AcidSpecies SpecificityGenome, HelminthSequence HomologySoftware ValidationHuman Genome ProjectMultigene FamilyGene OrderDNA, ViralCloning, MolecularGenome, PlastidExpressed Sequence TagsRecombination, GeneticMutationComputer SimulationMolecular Sequence AnnotationRepetitive Sequences, Nucleic AcidNucleic Acid ConformationGene DuplicationSequence AnalysisINDEL MutationChromosomes, Artificial, BacterialBase CompositionDNAProtein Structure, TertiaryDNA, BacterialDatabases, FactualCluster AnalysisGenes, ViralMarkov ChainsRNA, ViralHigh-Throughput Nucleotide SequencingReproducibility of ResultsDNA Transposable ElementsContig MappingBiological EvolutionBacterial ProteinsDNA, MitochondrialBinding SitesDNA, PlantViral ProteinsProtein Structure, SecondaryGene Expression ProfilingProtein ConformationPolymerase Chain ReactionGene Transfer, HorizontalTranscription, GeneticModels, StatisticalRNAGenes, BacterialChromosomesLikelihood FunctionsEscherichia coliRetroelementsPseudogenesDNA, IntergenicPattern Recognition, AutomatedNucleic Acid Hybridization