Evolution, MolecularPhylogenyDirected Molecular EvolutionMolecular Sequence DataSelection, GeneticModels, GeneticCultural EvolutionSpecies SpecificityGenetic VariationBase SequenceAmino Acid SequenceSequence Analysis, DNAAdaptation, BiologicalSequence AlignmentClonal EvolutionMutationModels, BiologicalMultigene FamilyFossilsPrimatesGenomeMammalsEvolution, ChemicalLikelihood FunctionsAdaptation, PhysiologicalConserved SequenceHominidaeSequence Homology, Amino AcidGene Transfer, HorizontalModels, MolecularComputer SimulationGenetic SpeciationAngiospermsTime FactorsPhenotypeReproductionSequence Homology, Nucleic AcidInvertebratesRecombination, GeneticEukaryotaSyntenyPan troglodytesGenome, BacterialPlantsPseudogenesProtein Structure, TertiaryGenomicsGenetic FitnessGenetics, PopulationGenetic DriftEcosystemComputational BiologyIntronsGenome, PlantModels, TheoreticalFishesBayes TheoremDrosophilaGenes, PlantChromosome MappingChordata, NonvertebrateEnvironmentDNA, MitochondrialEvolution, PlanetaryBiogenesisEscherichia coliDrosophila melanogasterCodonSexual Behavior, AnimalPolyploidyBacteriaProteinsBinding SitesAllelesPolymorphism, GeneticDNACloning, MolecularGenes, InsectGeographyGenes, DuplicateArthropodsPaleontologyPopulation DynamicsAmino Acid SubstitutionAlgorithmsEcologyEukaryotic CellsGame TheoryHybridization, GeneticDNA, PlantSymbiosisGenotypeLizardsKineticsBacterial ProteinsMutation RateRetroelementsProtein ConformationCluster AnalysisDNA Transposable Elements