PlastidsGenome, PlastidGene Expression ProfilingGene ExpressionGene Expression RegulationOligonucleotide Array Sequence AnalysisChloroplastsRNA, MessengerMolecular Sequence DataGene Expression Regulation, PlantBase SequenceTranscription, GeneticRhodophytaGene Expression Regulation, DevelopmentalPromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionArabidopsisGene Expression Regulation, NeoplasticTranscription FactorsPlant ProteinsDNA, ChloroplastGenes, PlantGene Expression Regulation, EnzymologicPhylogenyDNA, PlantChloroplast ProteinsArabidopsis ProteinsGene Expression Regulation, BacterialCryptophytaPhotosynthesisTobaccoGenome, ChloroplastDinoflagellidaGene Expression Regulation, ViralSignal TransductionPlants, Genetically ModifiedAmino Acid SequenceDNA-Binding ProteinsMutationPlant LeavesPlantsOenotheraCluster AnalysisCells, CulturedCell NucleusCell LineChlorophytaRNA, PlantCuscutaAlgal ProteinsSymbiosisTranscriptomeGenes, ReporterGene Expression Regulation, FungalEvolution, MolecularDNA PrimersPhenotypeSequence Analysis, DNADNA, ComplementaryEukaryotaModels, GeneticBlotting, NorthernPlants, ToxicDiatomsRNAMicroarray AnalysisUp-RegulationGenome, PlantPolymerase Chain ReactionCercozoaCell DifferentiationChlorophyllTransfectionDown-RegulationCloning, MolecularNuclear ProteinsSequence AlignmentLightTranscriptional ActivationGenes, ChloroplastModels, BiologicalIn Situ HybridizationCell Line, TumorTrans-ActivatorsGene Regulatory NetworksTime FactorsDNAGreen Fluorescent ProteinsReal-Time Polymerase Chain ReactionRepressor ProteinsAngiospermsComputational BiologyTetrapyrrolesSequence Homology, Amino AcidMice, Inbred C57BLDNA, AlgalMultigene FamilyExpressed Sequence TagsProtein BindingAlveolata